NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F078829

Metagenome Family F078829

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F078829
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 53 residues
Representative Sequence MIKWIKSIWEKLFTKKEDVEEVAPVKIDHCGTHLWYKKSCPECREAIK
Number of Associated Samples 66
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 64.66 %
% of genes near scaffold ends (potentially truncated) 30.17 %
% of genes from short scaffolds (< 2000 bps) 87.93 %
Associated GOLD sequencing projects 55
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (55.172 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(52.586 % of family members)
Environment Ontology (ENVO) Unclassified
(99.138 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.379 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.67%    β-sheet: 0.00%    Coil/Unstructured: 58.33%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF00476DNA_pol_A 17.24
PF01106NifU 6.90
PF01612DNA_pol_A_exo1 1.72
PF00313CSD 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 17.24
COG0694Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domainPosttranslational modification, protein turnover, chaperones [O] 6.90


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A55.17 %
All OrganismsrootAll Organisms43.97 %
unclassified Hyphomonasno rankunclassified Hyphomonas0.86 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001727|JGI24529J20061_100554Not Available1687Open in IMG/M
3300001728|JGI24521J20086_1019145All Organisms → Viruses → environmental samples → uncultured Mediterranean phage527Open in IMG/M
3300001735|JGI24520J20079_1006284Not Available696Open in IMG/M
3300001735|JGI24520J20079_1007366Not Available641Open in IMG/M
3300001735|JGI24520J20079_1007873Not Available619Open in IMG/M
3300002511|JGI25131J35506_1013169All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-I211138Open in IMG/M
3300002511|JGI25131J35506_1023753Not Available844Open in IMG/M
3300002511|JGI25131J35506_1060091All Organisms → Viruses → environmental samples → uncultured Mediterranean phage528Open in IMG/M
3300002760|JGI25136J39404_1029443All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300002760|JGI25136J39404_1047823Not Available792Open in IMG/M
3300002760|JGI25136J39404_1083158All Organisms → Viruses → environmental samples → uncultured Mediterranean phage600Open in IMG/M
3300006076|Ga0081592_1202064Not Available638Open in IMG/M
3300006308|Ga0068470_1212344Not Available1181Open in IMG/M
3300006316|Ga0068473_1386673Not Available654Open in IMG/M
3300006336|Ga0068502_1373280Not Available799Open in IMG/M
3300006336|Ga0068502_1439513Not Available1207Open in IMG/M
3300006336|Ga0068502_1467453Not Available830Open in IMG/M
3300006336|Ga0068502_1510325Not Available554Open in IMG/M
3300006339|Ga0068481_1438441Not Available1157Open in IMG/M
3300006340|Ga0068503_10441375All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales2558Open in IMG/M
3300006340|Ga0068503_10710663Not Available506Open in IMG/M
3300006347|Ga0099697_1341983All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales1241Open in IMG/M
3300006736|Ga0098033_1209893Not Available538Open in IMG/M
3300006738|Ga0098035_1114358All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300006751|Ga0098040_1035481Not Available1583Open in IMG/M
3300006753|Ga0098039_1183036All Organisms → Viruses → environmental samples → uncultured Mediterranean phage712Open in IMG/M
3300006753|Ga0098039_1212985All Organisms → Viruses → environmental samples → uncultured Mediterranean phage653Open in IMG/M
3300006754|Ga0098044_1215019All Organisms → Viruses → environmental samples → uncultured Mediterranean phage752Open in IMG/M
3300006793|Ga0098055_1357956All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300006924|Ga0098051_1205272All Organisms → Viruses → environmental samples → uncultured Mediterranean phage514Open in IMG/M
3300006926|Ga0098057_1176600All Organisms → Viruses → environmental samples → uncultured Mediterranean phage521Open in IMG/M
3300006927|Ga0098034_1178032All Organisms → Viruses → environmental samples → uncultured Mediterranean phage596Open in IMG/M
3300006929|Ga0098036_1091101Not Available938Open in IMG/M
3300007291|Ga0066367_1292974Not Available638Open in IMG/M
3300008050|Ga0098052_1273567All Organisms → Viruses → environmental samples → uncultured Mediterranean phage642Open in IMG/M
3300008216|Ga0114898_1016056Not Available2699Open in IMG/M
3300008216|Ga0114898_1028318Not Available1894Open in IMG/M
3300008216|Ga0114898_1037097All Organisms → Viruses1602Open in IMG/M
3300008216|Ga0114898_1055212Not Available1257Open in IMG/M
3300008216|Ga0114898_1144830All Organisms → Viruses → environmental samples → uncultured Mediterranean phage687Open in IMG/M
3300008217|Ga0114899_1060821Not Available1326Open in IMG/M
3300008217|Ga0114899_1227752All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300008218|Ga0114904_1005677Not Available4761Open in IMG/M
3300008218|Ga0114904_1010319Not Available3112Open in IMG/M
3300009413|Ga0114902_1006025Not Available4454Open in IMG/M
3300009413|Ga0114902_1170659Not Available541Open in IMG/M
3300009414|Ga0114909_1136870All Organisms → Viruses → environmental samples → uncultured Mediterranean phage652Open in IMG/M
3300009418|Ga0114908_1033295All Organisms → Viruses1934Open in IMG/M
3300009418|Ga0114908_1102871All Organisms → Viruses → environmental samples → uncultured Mediterranean phage953Open in IMG/M
3300009418|Ga0114908_1212565Not Available597Open in IMG/M
3300009602|Ga0114900_1042150Not Available1449Open in IMG/M
3300009602|Ga0114900_1130482Not Available665Open in IMG/M
3300009603|Ga0114911_1093285All Organisms → Viruses → environmental samples → uncultured Mediterranean phage884Open in IMG/M
3300009604|Ga0114901_1056340Not Available1337Open in IMG/M
3300009604|Ga0114901_1095287Not Available946Open in IMG/M
3300010153|Ga0098059_1344138Not Available566Open in IMG/M
3300010155|Ga0098047_10327518All Organisms → cellular organisms → Bacteria577Open in IMG/M
(restricted) 3300024052|Ga0255050_10027970All Organisms → cellular organisms → Bacteria1128Open in IMG/M
(restricted) 3300024517|Ga0255049_10027544All Organisms → cellular organisms → Bacteria2598Open in IMG/M
3300025029|Ga0207900_105949Not Available1087Open in IMG/M
3300025029|Ga0207900_112762Not Available709Open in IMG/M
3300025042|Ga0207889_1028467All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300025044|Ga0207891_1012818Not Available1175Open in IMG/M
3300025044|Ga0207891_1033705Not Available616Open in IMG/M
3300025045|Ga0207901_1013832All Organisms → Viruses → environmental samples → uncultured Mediterranean phage1119Open in IMG/M
3300025045|Ga0207901_1018050All Organisms → Viruses → environmental samples → uncultured Mediterranean phage970Open in IMG/M
3300025046|Ga0207902_1011816Not Available959Open in IMG/M
3300025046|Ga0207902_1012003Not Available953Open in IMG/M
3300025046|Ga0207902_1012825All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300025046|Ga0207902_1014046All Organisms → Viruses → environmental samples → uncultured Mediterranean phage898Open in IMG/M
3300025046|Ga0207902_1017142Not Available833Open in IMG/M
3300025050|Ga0207892_1029335Not Available630Open in IMG/M
3300025050|Ga0207892_1032186All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300025052|Ga0207906_1013347All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300025052|Ga0207906_1047553All Organisms → Viruses → environmental samples → uncultured Mediterranean phage577Open in IMG/M
3300025069|Ga0207887_1009889Not Available1475Open in IMG/M
3300025069|Ga0207887_1026275Not Available929Open in IMG/M
3300025069|Ga0207887_1032591All Organisms → Viruses → environmental samples → uncultured Mediterranean phage839Open in IMG/M
3300025069|Ga0207887_1040770Not Available754Open in IMG/M
3300025125|Ga0209644_1003410Not Available3091Open in IMG/M
3300025125|Ga0209644_1007478All Organisms → Viruses2228Open in IMG/M
3300025125|Ga0209644_1055511Not Available910Open in IMG/M
3300025125|Ga0209644_1076716All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300025128|Ga0208919_1189229Not Available622Open in IMG/M
3300025133|Ga0208299_1020464Not Available2950Open in IMG/M
3300025141|Ga0209756_1262387Not Available628Open in IMG/M
3300025264|Ga0208029_1020565Not Available1652Open in IMG/M
3300025264|Ga0208029_1024712Not Available1452Open in IMG/M
3300025267|Ga0208179_1008591All Organisms → Viruses3487Open in IMG/M
3300025267|Ga0208179_1015085Not Available2278Open in IMG/M
3300025267|Ga0208179_1021395Not Available1762Open in IMG/M
3300025270|Ga0208813_1017874Not Available1831Open in IMG/M
3300025277|Ga0208180_1015541Not Available2384Open in IMG/M
3300025277|Ga0208180_1037025Not Available1334Open in IMG/M
3300025277|Ga0208180_1064029Not Available901Open in IMG/M
3300025282|Ga0208030_1135386All Organisms → Viruses → environmental samples → uncultured Mediterranean phage590Open in IMG/M
3300025293|Ga0208934_1033179All Organisms → Viruses → environmental samples → uncultured Mediterranean phage993Open in IMG/M
3300025300|Ga0208181_1026204Not Available1351Open in IMG/M
3300025305|Ga0208684_1047069Not Available1201Open in IMG/M
3300025873|Ga0209757_10003977Not Available3733Open in IMG/M
3300025873|Ga0209757_10005982Not Available3125Open in IMG/M
3300025873|Ga0209757_10020555All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED2871830Open in IMG/M
3300025873|Ga0209757_10029975Not Available1548Open in IMG/M
3300025873|Ga0209757_10038709All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseibacillus → unclassified Roseibacillus → Roseibacillus sp.1378Open in IMG/M
3300025873|Ga0209757_10110747All Organisms → Viruses → environmental samples → uncultured Mediterranean phage845Open in IMG/M
3300025873|Ga0209757_10114156All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300025873|Ga0209757_10250289All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300028018|Ga0256381_1043853Not Available698Open in IMG/M
3300031775|Ga0315326_10690232All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300031804|Ga0310124_10629010All Organisms → Viruses → environmental samples → uncultured Mediterranean phage616Open in IMG/M
3300032278|Ga0310345_11268247All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300032820|Ga0310342_101417572Not Available825Open in IMG/M
3300032820|Ga0310342_102044105All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300034629|Ga0326756_026490All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300034654|Ga0326741_051579All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300034656|Ga0326748_006346unclassified Hyphomonas → Hyphomonas sp.1501Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine52.59%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean28.45%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine6.90%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.59%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater2.59%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.72%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.72%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.86%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.86%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.86%
Diffuse Hydrothermal FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids0.86%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001727Marine viral communities from the Pacific Ocean - LP-55EnvironmentalOpen in IMG/M
3300001728Marine viral communities from the Pacific Ocean - LP-46EnvironmentalOpen in IMG/M
3300001735Marine viral communities from the Pacific Ocean - LP-45EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300006076Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid AEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006316Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006347Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007291Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_AEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300024052 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_5EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300025029Marine viral communities from the Pacific Ocean - LP-39 (SPAdes)EnvironmentalOpen in IMG/M
3300025042Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)EnvironmentalOpen in IMG/M
3300025044Marine viral communities from the Pacific Ocean - LP-50 (SPAdes)EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025050Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025293Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2 (SPAdes)EnvironmentalOpen in IMG/M
3300025300Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300028018Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600mEnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300031804Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24529J20061_10055423300001727MarineMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHSRYKKSCPACKEAIK*
JGI24521J20086_101914513300001728MarineKIPIGSSITLRKRKMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK*
JGI24520J20079_100628423300001735MarineMIKWIKSIWEKLFTKKEDVETKKEDAEEVAPVKIDHCGTHLWYKKSCPECRE
JGI24520J20079_100736613300001735MarineMIKWIKSIWEKLFAKKEDVEEVVPVKIDHCGIHSRYKKSCPACMEVIK*
JGI24520J20079_100787323300001735MarineMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPECRE
JGI25131J35506_101316923300002511MarineMELRKXMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPECREAIK*
JGI25131J35506_102375313300002511MarineMIKWIKSIWEKLFAKKEEVEEVVPVKIDHCGIHSRYKKSCPACMEAIK*
JGI25131J35506_106009113300002511MarineMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPECREAIK*
JGI25136J39404_102944333300002760MarineMIKWIKSIWEKLFAKKEEVEEVVPVKIDHCGVHSRYKKSCPACMEAIK*
JGI25136J39404_104782343300002760MarineLRKRKMIKWIKSIWEKLFTKKEDAKDVAPVKIDHCDTHLWYKKSCPECKEAIK*
JGI25136J39404_108315813300002760MarineWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK*
Ga0081592_120206423300006076Diffuse Hydrothermal FluidsMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECKEAIK*
Ga0068470_121234443300006308MarineMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK*
Ga0068473_138667313300006316MarineMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSC
Ga0068502_137328013300006336MarineMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHL
Ga0068502_143951323300006336MarineMIKWIKSIWEKLFTKKEDAEETKKEDAEEIAPVKIDHCGTHLWYKKSCPECREAIK*
Ga0068502_146745323300006336MarineMIKWIKSIWEKLFTKKEDAEETKKEDGEEIAPVKIDHCGTHLWYKKSCPECREAIK*
Ga0068502_151032523300006336MarineMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHSRYKKSCPAC
Ga0068481_143844113300006339MarineMIKWIKSIWEKLFTKKEDVEEVAPVKIDHCGTHLWYKKSCPECR
Ga0068503_1044137553300006340MarineMIKWIKSLWEKLFTKKEDAEEVAPVEVAPVKIDHCGTHLWYKKSCPACREAIK*
Ga0068503_1071066313300006340MarineMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPECREA
Ga0099697_134198313300006347MarineMELRKRKMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK*
Ga0098033_120989323300006736MarineMIKWIKSIWEKLFTKKEDVEETKKEDAEEIAPVKIDHCGEHLWYKKSCPECRKAIK*
Ga0098035_111435823300006738MarineMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK*
Ga0098040_103548123300006751MarineMIKWIKSIWEKLFTKKEDVEDSEEVAPVKIDHCGEHLWYKKSCPDCRKAIK*
Ga0098039_118303623300006753MarineMIKWIKSIWEKFFTKKEDAEEVAPVKIDHCGEHLWYKKSCPECREAIK*
Ga0098039_121298513300006753MarineMIKWIKSIWEKLFTKKEEVAPVKEVAPVKEVAPVKIDHCGEHLWYKKSCPDCRKAIK*
Ga0098044_121501923300006754MarineMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGEHLWYKKSCPECREAIK*
Ga0098055_135795623300006793MarineMIKWIKSLWKKLFSKKEKKEEIISIKIDHCGTHLWYKKSCPECREAIK*
Ga0098051_120527213300006924MarineMIKWIKSIWKKFFTKKEEVAPVKEVAPVKEVAPVKIDHCGEHLWYKKSCPDCRKAIK*
Ga0098057_117660023300006926MarineMIKWIKSIWKKFFTKKEEVAPVKKVAPVKEVAPVKIDHCGEHLWYKKSCPDCRKAIK*
Ga0098034_117803213300006927MarineRKMIKWIKSIWEKLFTKKEEVAPVKEVAPVKIDHCGEHLWYKKSCPDCRKAIK*
Ga0098036_109110113300006929MarineILISSSMELRKRKMIKWIKSIWEKLFTKKEVAPIKLDHCSTHLWYKKSCPACREAIK*
Ga0066367_129297423300007291MarineMIKWIKSIWKKLFPKKEDAEEVAPVKIDHCGTHLW
Ga0098052_127356723300008050MarineMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGEHLWYKKSCPDCRKAIK*
Ga0114898_101605643300008216Deep OceanMELRKKMSKWIKFIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPACREAIK*
Ga0114898_102831843300008216Deep OceanMKLRKRKMIKWIKSIWEKLFTKKEEVAPVKIDHCGTHLWYKKSCPECREAIK*
Ga0114898_103709743300008216Deep OceanMIKWIKSIWEKLFTKKEEVAPVKEVAPVKEVAPVKIDHCGEHLWYKKSCPECREAIK*
Ga0114898_105521213300008216Deep OceanLISSSMELRKKMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPDCREAIK*
Ga0114898_114483013300008216Deep OceanMIKWIKSIWEKLFTKKEDAEETKKEDAEEVALVKIDHCGEHLWYKKSCPDCRKAIK*
Ga0114899_106082143300008217Deep OceanMELRKRKMIKWIKSIWKKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPECREGIK*
Ga0114899_122775223300008217Deep OceanMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPDCREAIK*
Ga0114904_100567763300008218Deep OceanMIKWIKSIWKKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPECREAIK*
Ga0114904_101031963300008218Deep OceanMELRKKMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPDCREAIK*
Ga0114902_100602563300009413Deep OceanMELRKKMSKWIKFIWEKLFTKKEEVAPVKEVAPVKEVAPVKIDHCGEHLWYKKSCPDCRKAIK*
Ga0114902_117065933300009413Deep OceanLRKRKMIKWIKSIWKKLFTKKEEVEEVAPVKIDHCGTHLWYKKSCPECREAIK*
Ga0114909_113687013300009414Deep OceanKQKILISSSMELRKKMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPDCREAIK*
Ga0114908_103329543300009418Deep OceanMELRKKMSKWIKFIWEKLFTKKEEVASVKEVAPVKIDHCGTHLWYKKSCPDCREAIK*
Ga0114908_110287113300009418Deep OceanIKSIWEKLFTKKEEVAPVKEVAPVKEVAPVKIDHCGEHLWYKKSCPDCRKAIK*
Ga0114908_121256513300009418Deep OceanKQKILISSSMELRKKMSKWIKFIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPACREAIK*
Ga0114900_104215023300009602Deep OceanMSKWIKFIWEKLFTKKEEVASVKEVAPVKIDHCGTHLWYKKSCPDCREAIK*
Ga0114900_113048223300009602Deep OceanMSKWIKFIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPACREAIK*
Ga0114911_109328543300009603Deep OceanKWIKSIWKKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPECREAIK*
Ga0114901_105634013300009604Deep OceanISSSMELRKKMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPDCREAIK*
Ga0114901_109528733300009604Deep OceanMIKWIKSIWKKLFTKKEEVEEVAPVKIDHCGTHLWYKKSCPECREAIK*
Ga0098059_134413813300010153MarineRKMIKWIKSIWEKLFTKKEVAPIKLDHCSTHLWYKKSCPACREAIK*
Ga0098047_1032751823300010155MarineMIKWIKSIWKKLFTKKEDAEEVAPVKEVAPVKIDHCGTHLWYKKSCPECREAIK*
(restricted) Ga0255050_1002797033300024052SeawaterMIKWIKSIWEKLFTKKKDVEEVAPVKIDHCGTHLWYKKSCPECRKAIK
(restricted) Ga0255049_1002754423300024517SeawaterMIKWIKSIWKKLFTKKEEVSPVKIDHCGTHSRFKKSCPECKALI
Ga0207900_10594923300025029MarineMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHSRYKKSCPACKEAIK
Ga0207900_11276213300025029MarineMELRKRKMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0207889_102846723300025042MarineMIKWIKSIWEKLFTKKEDAEEVAPVEVAPVKIDHCGTHLWYKKSCPACREAIK
Ga0207891_101281823300025044MarineMSKWIKFIWEKLFTKKEDAETKKEDAEEVTPVKIDHCGTHLWYKKSCPECREAIK
Ga0207891_103370513300025044MarineRKMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHSRYKKSCPACKEAIK
Ga0207901_101383213300025045MarineKMIKWIKSIWEKLFTKKEDVEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECRDAIK
Ga0207901_101805013300025045MarineMELRKRKMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0207902_101181613300025046MarineMELRKRKMIKWIKSIWEKLFTKKEDVETKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0207902_101200343300025046MarineTRENGKQKILIGSSMELRKRKMIKWIKSIWEKLFTKKEDAEDAEEVAPVKIDHCGTHLWYKKSCTECREAIK
Ga0207902_101282523300025046MarineMIKWIKSIWEKLFAKKEEVEEVVPVKIDHCGVHSRYKKSCPACMEAIK
Ga0207902_101404623300025046MarineMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0207902_101714223300025046MarineMIKWIKSIWEKLFAKKEDVEEVVPVKIDHCGIHSRYKKSCPACMEVIK
Ga0207892_102933533300025050MarineMIKWIKSIWEKLFAKKEEVEEVVPVKIDHCSVHSRYKKSCPACMEAIK
Ga0207892_103218623300025050MarineMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0207906_101334723300025052MarineMELRKRKMIKWIKSIWEKLFTKKEDAEEVAPVEVAPVKIDHCGTHLWYKKSCPACREAIK
Ga0207906_104755313300025052MarineRKRKMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0207887_100988933300025069MarineMINWIKSIWEKLFAKKEEVEEVVPVKIDHCGVHSRYKKSCPACMEAIK
Ga0207887_102627523300025069MarineMIKWIKSIWEKLFTKKEDAEDAEEVAPVKIDHCGTHLWYKKSCTECREAIK
Ga0207887_103259123300025069MarineMELRKKMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0207887_104077023300025069MarineMELRKRKMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECKEAIK
Ga0209644_100341073300025125MarineMIKWIKSIWEKFFTKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0209644_100747873300025125MarineMIKWIKSIWKKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPDCREAIK
Ga0209644_105551123300025125MarineMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECKEAIK
Ga0209644_107671623300025125MarineMIKWIKSIWEKLFTKKEDAKDVAPVKIDHCDTHLWYKKSCPECKEAIK
Ga0208919_118922943300025128MarineMWRILANGKQKILISSSMELRKRKMIKWIKSIWEKLFTKKEVAPIKLDHCSTHLWYKKSCPACREAIK
Ga0208299_102046443300025133MarineMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGEHLWYKKSCPDCRKAIK
Ga0209756_126238723300025141MarineMIKWIKSIWKKLFTKKEDVEETKKEDAEEVAPVKIDHCGEHLWYKKSCPECRKAIK
Ga0208029_102056543300025264Deep OceanMIKWIKSIWKKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0208029_102471253300025264Deep OceanMSKWIKFIWEKLFTKKEEVAPVKEVAPVKEVAPVKIDHCGEHLWYKKSCPDCRKAIK
Ga0208179_100859163300025267Deep OceanMSKWIKFIWEKLFTKKEEVASVKEVAPVKIDHCGTHLWYKKSCPDCREAIK
Ga0208179_101508543300025267Deep OceanMIKWIKSIWEKLFTKKEEVAPVKEVAPVKEVAPVKIDHCGEHLWYKKSCPECREAIK
Ga0208179_102139543300025267Deep OceanMIKWIKSIWEKLFTKKEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0208813_101787443300025270Deep OceanMELRKKMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPDCREAIK
Ga0208180_101554143300025277Deep OceanMSKWIKFIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPACREAIK
Ga0208180_103702543300025277Deep OceanSSSMELRKKMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPDCREAIK
Ga0208180_106402933300025277Deep OceanMIKWIKSIWKKLFTKKEEVEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0208030_113538623300025282Deep OceanMELRKKMSKWIKFIWEKLFTKKEEVASVKEVAPVKIDHCGTHLWYKKSCPDCREAIK
Ga0208934_103317913300025293Deep OceanTLRKRKMIKWIKSIWEKLFTKKEEVAPVKEVAPVKEVAPVKIDHCGEHLWYKKSCPDCRKAIK
Ga0208181_102620423300025300Deep OceanMSKWIKFIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPDCREAIK
Ga0208684_104706943300025305Deep OceanMELRKKMSKWIKFIWEKLFTKKEDAEEVAPVKIDHCGT
Ga0209757_1000397743300025873MarineMQTLLRRKMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHSRYKKSCPACKEAIK
Ga0209757_1000598273300025873MarineMIKWIKSIWEKLFTKKEDVEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0209757_1002055543300025873MarineEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0209757_1002997533300025873MarineMIKWIKSIWEKLFTKKEDGEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECKEAIK
Ga0209757_1003870953300025873MarineEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECKEAIK
Ga0209757_1011074733300025873MarineEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIE
Ga0209757_1011415623300025873MarineMIKWIKSIWEKLFTKKEDTEEVAPVKIDHCGTHLRYKKSCPECREAIK
Ga0209757_1025028923300025873MarineMIKWIKSIWEKLFTKKEKEEVSPVKIDHCGTHSRFKKSCPACKALI
Ga0256381_104385313300028018SeawaterMIKWIKSIWEKLFTKKEEVAPVKEAAPIKEVAPIKIDHCGEHLWYKKSCPDCRKA
Ga0315326_1069023223300031775SeawaterMIKWIKSIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0310124_1062901023300031804MarineMIKWIKSIWEKLFTKKEDAEEVAPVKEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0310345_1126824723300032278SeawaterMVKWIKSIWEKLFTKKEEVAPVKEVAPVKIDHCGTHLWYKKSCPECNEAIK
Ga0310342_10141757223300032820SeawaterMIKWIKSIWEKLFIKKEDAEETKKEDAEEVAPVKIDHCGEHLWYKKSCPDCRKAIK
Ga0310342_10204410523300032820SeawaterMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECREAIK
Ga0326756_026490_382_5283300034629Filtered SeawaterMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPECREVIK
Ga0326741_051579_88_2583300034654Filtered SeawaterMIKWIKSIWEKLFTKKEDAEETKKEDAEEVAPVKIDHCGTHLWYKKSCPECRDAIK
Ga0326748_006346_1274_14413300034656Filtered SeawaterMELRKRKMIKWIKSIWEKLFTKKEDAEEVAPVKIDHCGTHLWYKKSCPECREVIK


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