Metagenome / Metatranscriptome Family F078984

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078984
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	86 residues
Representative Sequence	LKPTTRTGLFKFYFDPLFDYPFGGIEVPNMRALMDFISSEYDEIGPTKSPEELVEWLKRFHTELAQRLHNGEAVLDMIPE
Number of Associated Samples	100
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.65 %
% of genes near scaffold ends (potentially truncated)	75.86 %
% of genes from short scaffolds (< 2000 bps)	84.48 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.552 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.793 % of family members)
Environment Ontology (ENVO)	Unclassified (31.897 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.034 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.89% β-sheet: 0.00% Coil/Unstructured: 61.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF07690	MFS_1	12.93
PF04055	Radical_SAM	4.31
PF10458	Val_tRNA-synt_C	3.45
PF03320	FBPase_glpX	2.59
PF00156	Pribosyltran	2.59
PF04317	DUF463	2.59
PF00226	DnaJ	2.59
PF14384	BrnA_antitoxin	1.72
PF00005	ABC_tran	1.72
PF09670	Cas_Cas02710	0.86
PF13353	Fer4_12	0.86
PF02254	TrkA_N	0.86
PF04777	Evr1_Alr	0.86
PF10691	DUF2497	0.86
PF05443	ROS_MUCR	0.86
PF04879	Molybdop_Fe4S4	0.86
PF01522	Polysacc_deac_1	0.86
PF11940	DUF3458	0.86
PF13394	Fer4_14	0.86
PF04909	Amidohydro_2	0.86
PF13673	Acetyltransf_10	0.86
PF02321	OEP	0.86
PF01568	Molydop_binding	0.86
PF00857	Isochorismatase	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	2.59
COG3106	Ras-like GTP-binding stress-induced protein YcjX, DUF463 family	Signal transduction mechanisms [T]	2.59
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.72
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.86
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.86
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.86
COG4957	Predicted transcriptional regulator	Transcription [K]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.55 %
Unclassified	root	N/A	3.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.55 %
Unclassified	root	N/A	3.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.55 %
Unclassified	root	N/A	3.45 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	92.24 %
Unclassified	root	N/A	3.45 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	85.34 %
Unclassified	root	N/A	3.45 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	59.48 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	11.21 %
Unclassified	root	N/A	3.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	59.48 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	3.45 %
Unclassified	root	N/A	3.45 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	59.48 %
Unclassified	root	N/A	3.45 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2.59 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.86 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	59.48 %
Unclassified	root	N/A	3.45 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2.59 %
Magnetospirillum caucaseum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum caucaseum	0.86 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_111242779	Not Available	949	Open in IMG/M
3300001867\|JGI12627J18819_10381551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300004080\|Ga0062385_10395028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300004082\|Ga0062384_100277793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1029	Open in IMG/M
3300004091\|Ga0062387_100404743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300004092\|Ga0062389_102376375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300004092\|Ga0062389_102932872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300004152\|Ga0062386_100818162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	768	Open in IMG/M
3300004152\|Ga0062386_101442320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300005332\|Ga0066388_100374219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2071	Open in IMG/M
3300005439\|Ga0070711_100147706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1770	Open in IMG/M
3300005451\|Ga0066681_10270502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1035	Open in IMG/M
3300005471\|Ga0070698_100874719	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005536\|Ga0070697_101750199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300005610\|Ga0070763_10059017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1845	Open in IMG/M
3300005764\|Ga0066903_106507503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300005902\|Ga0075273_10098088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300005921\|Ga0070766_10001574	All Organisms → cellular organisms → Bacteria → Proteobacteria	11177	Open in IMG/M
3300006176\|Ga0070765_100041344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3694	Open in IMG/M
3300006796\|Ga0066665_10394701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1140	Open in IMG/M
3300006797\|Ga0066659_11683592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300006806\|Ga0079220_10520303	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300006806\|Ga0079220_12141690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300010048\|Ga0126373_10188367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1990	Open in IMG/M
3300010358\|Ga0126370_12509939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300010360\|Ga0126372_11705796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300010361\|Ga0126378_10036825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4445	Open in IMG/M
3300010366\|Ga0126379_13115313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300010376\|Ga0126381_100493237	All Organisms → cellular organisms → Bacteria → Proteobacteria	1726	Open in IMG/M
3300010376\|Ga0126381_102665555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	715	Open in IMG/M
3300011270\|Ga0137391_10216597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1664	Open in IMG/M
3300011271\|Ga0137393_10990739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300011271\|Ga0137393_11083126	Not Available	681	Open in IMG/M
3300011271\|Ga0137393_11649316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300012203\|Ga0137399_11721338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300012207\|Ga0137381_10636669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	928	Open in IMG/M
3300012209\|Ga0137379_11810224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300012211\|Ga0137377_10974629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300012351\|Ga0137386_10879410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300012353\|Ga0137367_10561041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M
3300012582\|Ga0137358_10649105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300012685\|Ga0137397_10605540	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300012923\|Ga0137359_11497568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300015242\|Ga0137412_10769833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	709	Open in IMG/M
3300016270\|Ga0182036_10302671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1217	Open in IMG/M
3300016294\|Ga0182041_10728762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	881	Open in IMG/M
3300016445\|Ga0182038_10715435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	873	Open in IMG/M
3300017955\|Ga0187817_10139717	All Organisms → cellular organisms → Bacteria → Proteobacteria	1538	Open in IMG/M
3300018433\|Ga0066667_10438926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1064	Open in IMG/M
3300018433\|Ga0066667_10782655	Not Available	809	Open in IMG/M
3300020579\|Ga0210407_10406419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1065	Open in IMG/M
3300020580\|Ga0210403_10378383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1157	Open in IMG/M
3300020583\|Ga0210401_10580616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300021170\|Ga0210400_10250416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1449	Open in IMG/M
3300021170\|Ga0210400_10749335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300021171\|Ga0210405_10415143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1059	Open in IMG/M
3300021420\|Ga0210394_10418535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1179	Open in IMG/M
3300021475\|Ga0210392_10065476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2290	Open in IMG/M
3300021476\|Ga0187846_10271139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300021479\|Ga0210410_11465081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300021560\|Ga0126371_10021955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5899	Open in IMG/M
3300021560\|Ga0126371_10828714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1071	Open in IMG/M
3300021560\|Ga0126371_12889050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300022529\|Ga0242668_1046669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300022533\|Ga0242662_10116376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300022709\|Ga0222756_1071163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300022712\|Ga0242653_1051656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300022717\|Ga0242661_1071766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300022726\|Ga0242654_10380544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300027605\|Ga0209329_1057344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300027698\|Ga0209446_1004267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3507	Open in IMG/M
3300027783\|Ga0209448_10075215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1134	Open in IMG/M
3300027783\|Ga0209448_10275720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300027783\|Ga0209448_10305066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300027855\|Ga0209693_10091499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1504	Open in IMG/M
3300027889\|Ga0209380_10003474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9789	Open in IMG/M
3300027903\|Ga0209488_10773594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300028906\|Ga0308309_10463060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1093	Open in IMG/M
3300031543\|Ga0318516_10441454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300031546\|Ga0318538_10302759	All Organisms → cellular organisms → Bacteria → Proteobacteria	861	Open in IMG/M
3300031564\|Ga0318573_10476809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	671	Open in IMG/M
3300031680\|Ga0318574_10148879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1328	Open in IMG/M
3300031708\|Ga0310686_107602784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1258	Open in IMG/M
3300031715\|Ga0307476_10874118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300031724\|Ga0318500_10099846	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300031724\|Ga0318500_10610910	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031736\|Ga0318501_10351016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300031744\|Ga0306918_10060841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2552	Open in IMG/M
3300031747\|Ga0318502_10229296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1080	Open in IMG/M
3300031770\|Ga0318521_10536928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300031771\|Ga0318546_10347376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1032	Open in IMG/M
3300031777\|Ga0318543_10029233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2131	Open in IMG/M
3300031793\|Ga0318548_10613578	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300031821\|Ga0318567_10506822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum caucaseum	685	Open in IMG/M
3300031846\|Ga0318512_10222481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	927	Open in IMG/M
3300031860\|Ga0318495_10078453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1476	Open in IMG/M
3300031896\|Ga0318551_10039734	All Organisms → cellular organisms → Bacteria → Proteobacteria	2328	Open in IMG/M
3300031896\|Ga0318551_10104706	All Organisms → cellular organisms → Bacteria → Proteobacteria	1509	Open in IMG/M
3300031910\|Ga0306923_10003426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14916	Open in IMG/M
3300031910\|Ga0306923_12057998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300031912\|Ga0306921_12278886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300031942\|Ga0310916_10048050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3246	Open in IMG/M
3300031945\|Ga0310913_10013608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4932	Open in IMG/M
3300031945\|Ga0310913_10536645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	830	Open in IMG/M
3300031947\|Ga0310909_10082389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2554	Open in IMG/M
3300031954\|Ga0306926_10000217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	49867	Open in IMG/M
3300032010\|Ga0318569_10041600	All Organisms → cellular organisms → Bacteria → Proteobacteria	1959	Open in IMG/M
3300032035\|Ga0310911_10538413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300032039\|Ga0318559_10234622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300032044\|Ga0318558_10653474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300032051\|Ga0318532_10210330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300032090\|Ga0318518_10544830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300032094\|Ga0318540_10016183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3030	Open in IMG/M
3300032515\|Ga0348332_11075098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300033290\|Ga0318519_11063272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.66%
Aquatic	Environmental → Aquatic	10.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.93%
Freshwater	Environmental → Aquatic → Freshwater	10.34%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.86%
Cave	Environmental → Terrestrial → Cave	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.86%
Loam	Environmental → Terrestrial → Soil → Loam	11.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.93%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.86%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.86%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005902	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1112427792	3300000956	Soil	KFYLDPLFDYPFGGIEIENMRAMMEFISSRYENIKPTKSPEEVVTWLEEFHTRLAERLHRGEAVLDMIPE*
JGI12627J18819_103815511	3300001867	Forest Soil	MFDYPFGGIEIRNMSALMDFISSEYDEIRPTKSPEDLVAWLRNFHTELAQRLHNGEAVLDMIPE*
Ga0062385_103950281	3300004080	Bog Forest Soil	MRTGSFRFYFDPLFDYPFGGIEVQNIRGLMELISGEYEVRPTRAPEAVAEWLEHFHTGLAERLHNGQPVLDLIPE*
Ga0062384_1002777933	3300004082	Bog Forest Soil	RTGSFRFYFDPLFDYPFGGIEVPNMRGLMALISAEYDDIEPVETPKNMIDWLKGFHTELARRLHDGETVLDLIPH*
Ga0062387_1004047432	3300004091	Bog Forest Soil	MRHHFKAELRSWLNKIPRIRLKPNARTGSFKFYFDPLFDYPFGGVEIHNTRALMEFISSEYDGIRPTIPPEEMATWLKEFHTKLSQALHNGEAVIEMVPE*
Ga0062389_1023763751	3300004092	Bog Forest Soil	HFKRELRDWLDEIQRIRLKPTTRTGSFRFYFDPLFDYPFGGVEVPNMRALMGLISSQYEDQEPAETPENMIEWLKGFHTQLAQRLHNGEAVLDLIPD*
Ga0062389_1029328721	3300004092	Bog Forest Soil	QHFKRELRNWFNEIQSIRLKPSMRTGSFKFYFDALFDYPFGGIEVQNMRALMELISGEYEMRPTKAPEDLVQWLERFHTTLAERLHNGQPVLDMIPD*
Ga0062386_1008181622	3300004152	Bog Forest Soil	NEIQRIRLKPTMRTGSFKFYFDPLFDYPFGGIEVPNMRAMMEFISSEYDQVKPSKSPEELVEWLKKFHTELAQRLHNGEAVLDLIPE*
Ga0062386_1014423202	3300004152	Bog Forest Soil	LVKLVGFPFPEELRQHFRKELRSWLNRIQRLRLKPDTRTGSVKFYFDPLFDYPFGGIEVPNMRALMEFISSEYEGVRPNLPPEEMAAWLKRFHTRLAEALHNGQAVLDLLPE*
Ga0066388_1003742192	3300005332	Tropical Forest Soil	LDETQRIRLQSTARTGSLKFYFDPLFDYPFGGIEVANMRALMDLISNEYDDITPTKSPEELVDWTKRLYTELAQGLHNGEAVLDMIPE*
Ga0070711_1001477061	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RIRLRPNARTGSFKFYFNPLFDYPFGGVEIHNTRALMEFISSEYDGIRPTISPEEMANWLKEFHTKLAQALHNGEAVLDMVPE*
Ga0066681_102705022	3300005451	Soil	LIHIATALRTELRSWFNKIQTIRLKPNARTGSFKFYFDPLFDYPFGGVEIQNTRALMEFISSEYDGIRPTISPEQMAIWLKEFHTKLAQALHNGEAVLDMVAE*
Ga0070698_1008747192	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SFRFYFDPLFDYPFGGIEVSNMRALMEFISSEYNEIRPTKSPEELVEWLKGFHTELAQRLHNGEAVLDMIPD*
Ga0070697_1017501992	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKPTSRAGSVRFYFNHLFDYPFGGNEVQTMRAMMEFISSDYDGIQPTRSQEEVVGWLKEFHTTLAQRLHNGEAVLDLVPE*
Ga0070763_100590172	3300005610	Soil	LQAHFERELRNWLEEIQRIRLKPTTGTGSFRFYFDPLFDYPFGGVEVQNIRARMDFISGEYEGAKPTKTPEAMAQWLKQFHTVLSERLHNGETVLDLIPE*
Ga0066903_1065075031	3300005764	Tropical Forest Soil	FYFDPLFDYPFGGIEVRNMLGLVQLISREYEAQPTETPEELVSWLRDFHTELASRLHQGEEVLDLIPT*
Ga0075273_100980881	3300005902	Rice Paddy Soil	LIKLVAFDFSPDMRRHFKRELRNWLIEIQAIRLKPTTRTGSTRFYFEHLFDYPFGGVEVQNTRALIELIASEYDGMEAKRTPEDMAAWLKAFHGELAERLHEGKPVLDLIPE*
Ga0070766_100015748	3300005921	Soil	LEEIQRIRLKPTTGTGSFRFYFDPLFDYPFGGVEVQNIRARMDFISGEYEGAKPTKTPEAMAQWLKQFHTVLSERLHNGETVLDLIPE*
Ga0070765_1000413445	3300006176	Soil	LFDYPFGGVEIHNARALMEFISSEYDGIRPTTSPEEMAIWLKEFHTKLAQALHNGEAVLDMVPE*
Ga0066665_103947012	3300006796	Soil	RRHFRREASSWLNKIQRLRMKPTSRTGSVRFYFNHLFDYPFGGNEVHTMRAMMEFISSDYDGIQPTKSPEEVVAWLKEFHTTLAQRLHDGEAVLDLVPE*
Ga0066659_116835921	3300006797	Soil	LVGFDFPPETRSHFKRELRTWLDEVQTIRLKPTRRTGSFKFYFDPLFDYPFGGVEVENMSALTRFITREYEGIQPTKTPEQLVAWLRSFHEELAERLHNREDVLDLIPE*
Ga0079220_105203032	3300006806	Agricultural Soil	LRSSVLTAFKFYFDPLFDYPFGGIEAPNMRALMNFISNEYNEITPTKSPEEVVVWLRRFHTDLAQRLHNGEAVLDMIPE*
Ga0079220_121416902	3300006806	Agricultural Soil	KPTTRTRSFRFYFDPLFDYPFGGIEMPNMRALVEFISSEYDGIRPTKSPEKLVAWLRGFHTELAQRLHNGEAVLDLIPE*
Ga0126373_101883672	3300010048	Tropical Forest Soil	LQSTARTGSLKFYFDPLFDYPFGGIEVANMRALMDLISNEYDDITPTKSPEELVDWMKRLYTELAQGLHNGEAVLDMIPE*
Ga0126370_125099392	3300010358	Tropical Forest Soil	FYFPDELRTHFRRELRNWLDEIQRIRLKPSTGTGSFKFYFNPLFDYPFGGVEVQNMRALIDFISGEYDGIRPVKTPEQLLEWLKGFDTELARLQDGEAVLDLIPQ*
Ga0126372_117057961	3300010360	Tropical Forest Soil	LKPTTRTGLFKFYFDPLFDYPFGGIEVPNMRALMDFISSEYDEIGPTKSPEELVEWLKRFHTELAQRLHNGEAVLDMIPE*
Ga0126378_100368252	3300010361	Tropical Forest Soil	LDETQRIRLQSTARTGSLKFYFDPLFDYPFGGIEVANMRALMDLISNEYDDITPTKSPEELVDWMKRLYTELAQGLHNGEAVLDMIPE*
Ga0126379_131153131	3300010366	Tropical Forest Soil	IQRIRLKPTTRTGSFKFYFDPLFDYPFGGIEAPNMRALMNFISNEYDEITPTKSPEEVVVWLRRFHTDLAQRLHNGEAVLDMIPE*
Ga0126381_1004932372	3300010376	Tropical Forest Soil	LFDYPFGGIEIQNMRAMVDFVSSRYDNIRPTKSAEELVDWLKDFHTRLTERVPRGDTVLDLIPE*
Ga0126381_1026655551	3300010376	Tropical Forest Soil	RLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE*
Ga0137391_102165971	3300011270	Vadose Zone Soil	LNEIQRIRLKPTRTGSFRFYFDPLFDYPFGGIEVPNMRALMEFISSEYDEIRPTKSPEELVEWLKGFHSELAQRLHSGEAVLDMIPD*
Ga0137393_109907392	3300011271	Vadose Zone Soil	FDFPPQLRDHFRRELRNWLNEIQRIRLKPTTRTGSFRFYFDPLFDYPFGGIEVPNMRALMEFISSEYDEIRSTKSPEELVEWLKGFQTELAQRLHNGEAVLDMIPD*
Ga0137393_110831261	3300011271	Vadose Zone Soil	FYFDPLFDYPFGGIEVSNIRALMEFISSEYDNIGPTKSPEEMVGWLKEFHTELAQRLHNGEAVLDMIPE*
Ga0137393_116493161	3300011271	Vadose Zone Soil	VKLTAFDFPPELRAHFRRELRNWLDEIQRIRLNPTTRTGSFRFYFDPLFDYPFGGVEVQNTRALMDFIATEYGAVRPTKTPEEMAEWLKQFHTTLSERLHNGEEVLDLMPE*
Ga0137399_117213382	3300012203	Vadose Zone Soil	WLNKVQRIRLKPNARTGSFKFYSDPLFDYPFGGVEIHNTRALMEFISSEYDGIRPTISPEEMATWLKEFHTKLAQALHNGEAVLDMAPD*
Ga0137381_106366691	3300012207	Vadose Zone Soil	NEIQRIRLKPTTRTGSFRFYFDPLFDYPFGGIEVPNMRALMEFISSEYDEIRPTKSPEELVEWLRGFHTVLAQRLHNGEAVLDMIPD*
Ga0137379_118102241	3300012209	Vadose Zone Soil	LTAFDFSPELRAHFKRELRNWLDEIQRIRLKPTTRTGSFKFYFDPLFDFPFGGVAVQNARALMDFIATEYDGAKPTKAPEEVAEWLKQFHTTLSERLHNGEAVLDLIPE*
Ga0137377_109746292	3300012211	Vadose Zone Soil	RLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRALIEFISSEYDEIRPIRSPEELVGWLKAFHTELAQRLHDGEAVLDLIPE*
Ga0137386_108794102	3300012351	Vadose Zone Soil	FYFDPLFDYPFGGIEVPNMRALMEFISSEYDEIRPTKSPEELVEWLRGFHTVLAQRLHNGEAVLDMIPD*
Ga0137367_105610412	3300012353	Vadose Zone Soil	FDFSPELRAHFRRELRNWLDEIQRIRLKPTTRTGSFRFYFDPLFDYPFGGVEVQNARALMDFIATEYEEAKPTKTPEEVAEWLKRFHTMLSGRLHNGEAVLDLIPE*
Ga0137358_106491052	3300012582	Vadose Zone Soil	VKLIAFQFDPQFRHHFRTELRSWLNKVQRIRLKPNARTGSFKFYFDPLFDYPFGGVEIHNTRALMEFISSEYDGIRPTISPEEMANWLKEFHTKLAQALHNGEAVLDMVPE*
Ga0137397_106055402	3300012685	Vadose Zone Soil	MTGCRSDRTGSFKFYFDPLFDYPFGSIEVANMRALMEFISSEYDDIRPTKSPEELVEWLKGFHSELAQRLHSGEAVLDMIPD*
Ga0137359_114975682	3300012923	Vadose Zone Soil	PAELRRHFRKEASSWLNKIQRLRMKPTSRTGSVRFYFNHLFDYPFGGNEVQTMRAMMEFISSDYDGIQPTNSPEEVVTWLKEFHTALAQRLHNGEAVLDLVPE*
Ga0137412_107698332	3300015242	Vadose Zone Soil	WFNKIQRIRLNPNARTGSFKFYFDPLFDYPFGGVEIHNTRALMEFISSEYDGIRPTISPEEMATWLKEFHTKLAQALHNGEAVLDMAPD*
Ga0182036_103026712	3300016270	Soil	WLDEIQRIRLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0182041_107287621	3300016294	Soil	RLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0182038_107154351	3300016445	Soil	RLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0187817_101397173	3300017955	Freshwater Sediment	LFDYPFGGVEVQNTRALMEFISSEYDGIRPSRSPEDLAVWLRQFHTRLAEALHNGETVLDLLPE
Ga0066667_104389261	3300018433	Grasslands Soil	RRTGSFKFYFDPLFDYPFGGVEVENMSALTRFISREYEGIQPTKTPEQLVAWLRSFHEELAERLHNREDVLDLIPE
Ga0066667_107826551	3300018433	Grasslands Soil	GSFRFYFDPLFDYPFGGIELPNMQALTELISGEYEMRPTKTPEELVQWLKHFHTGLAERLHNGESILDMIPE
Ga0210407_104064192	3300020579	Soil	LENWLDEIQKIHLKPTRRTGLLKFYFDPLFDYPFGGIEVQNMRAMMEFISSRYENIKPTISPEELVAWLEEFHTRLSERLQRGEAVLVVIPE
Ga0210403_103783833	3300020580	Soil	NKIQRIRLKPNARTGSFKFYFDPLFDYPFGGVEIHNARALMEFISSEYDGIRPAISPEEMAIWLKEFHTKLAQALHNGEAVLDMVPE
Ga0210399_109910061	3300020581	Soil	FDYPFGGVEIHNARALMEFISSEYDGIRPAISPEEMAIWLKEFHTKLAQALHNGEAVLDMVPE
Ga0210401_105806162	3300020583	Soil	MKIDETLEMAYPQKLKPNAQTGSCKFYFDPLFDYPFGGVEIHNARALMEFISSEYDGIRPAISPEEMAIWLKEFHTKLAQAL
Ga0210400_102504162	3300021170	Soil	MKPTSRTGSVRFYFNHLFDYPFGGNEVQTMRAMMEFISSDYDEIQPTKSPEEVVAWLKESHAKLAQRLDDGEAVLDMVPE
Ga0210400_107493352	3300021170	Soil	MKIDETLEMAYPQKLKPNAQTGSCKFYFDPLFDYPFGGVEIHNARALMEFISSEYDGIRPAISPEEMAIWLKEFHAKLAQALHNGEAALDRVPE
Ga0210405_104151432	3300021171	Soil	MKIDETLEMAYPQKLKPNAQTGSCKFYFDPLFDYPFGGVEIHNARALMEFISSEYDGIRPAISPEEMAIWLKEFHTKLAQALHNGEAVLDMVPE
Ga0210394_104185351	3300021420	Soil	LIAFEFDPQLRHHFRAELRSWLNKIQRIRLKPNARTGSFKFYFDPLFDYPFGGVETHNTRALMEFISSEYDGIRPTISPEDMASRLKEFHTKLAHALHNGEAVLDMVPE
Ga0210392_100654761	3300021475	Soil	QHFGSPDAQGLALLRNHFRADLRSWLNKIQRIRLKPNARTGSFKFYFDPLFDYPFGGVEIHNTRALMEFIWSEYDGIRPTISPEEMANWLKEFHTQLAQALHNGEAVLDMVPE
Ga0187846_102711392	3300021476	Biofilm	DEIQRIRLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0210410_114650811	3300021479	Soil	FQFDPQLRHRFRAELRSWLNKIQRIRLKPNAQTGSFKFYFDPLFDYPFGGVEIPNTRALMEFISSEYDGIRPTISPEEMAIWLKEFHTKLAQALHNGEAVLDMVPE
Ga0126371_100219553	3300021560	Tropical Forest Soil	LQSTARTGSLKFYFDPLFDYPFGGIEVANMRALMDLISNEYDDITPTKSPEELVDWMKRLYTELAQGLHNVEAVLDMIPE
Ga0126371_108287142	3300021560	Tropical Forest Soil	VKPTTRTGSFKFYFDPLFDYPFGGIEVPNMRALMDFISSEYDEIGPIKSPEELVEWLKRFRTELAQRLHNGKAVLDMIPE
Ga0126371_128890501	3300021560	Tropical Forest Soil	TLSNSRDLISHPSHESISRTGSFKFYFDPLFDYPFGGVELGNMRALMEFLANEYNGIRPTKSPEELVEWLKEFHTELAQRLHNGEMVLDLIPE
Ga0242668_10466691	3300022529	Soil	PNARTGSFKFYFDPLFDYPFGGVEIHNARALMEFISSEYDGIRPAISPEEMAIWLKEFHAKLAQALHNGEAALDRVPE
Ga0242662_101163761	3300022533	Soil	LKSTTRPGSFRFYFDPLFDYPFGGIEVSNMRALMEFISSEYDEIRPTKSPEELVEWLKGCHTELAQRLHNGEAVLDMIPD
Ga0222756_10711631	3300022709	Soil	HFRAELRSWLNKIQRIRLKPNARTGSFKFYFDPLFDYPFGGVEIHNARALMEFISSEYDGIRPAISPEEMAIWLKEFHAKLAQALHNGEAALDRVPE
Ga0242653_10516562	3300022712	Soil	MKIDETLEMAYPQELKPNAQTGSCKFYFDPLFDYPFGGVEIHNARALMDFISSEYDGIRPAISPEEMAIWLKEFHAKLAQALHNGEAALDRVPE
Ga0242661_10717662	3300022717	Soil	EIRMKIDETLEMAYPQKLKPNAQTGSCKFYFDPLFDYPFGGVEIHNARALMEFISSEYDGIRPAISPEEMAIWLKEFHAKLAQALHNGEAALDRVPE
Ga0242654_103805441	3300022726	Soil	TTRTGSFRFYFDPLFDYPFGGVEVQNTRALMDFIATEYDAVRPTKTPEEMAEWLKQFHTALSERLHSGEEVLDLIPE
Ga0209329_10573441	3300027605	Forest Soil	YFDPLFDYPFGGVEIHNTRALMEFISSEYDGIRPTISPEEMANWLKEFHTQLAQALHNGEAVLDMVPE
Ga0209446_10042674	3300027698	Bog Forest Soil	MRTGSFRFYFDPLFDYPFGGIEVQNIRGLMELISGEYEVRPTRAPEAVAEWLEHFHTGLAERLHNGQPVLDLIPE
Ga0209448_100752152	3300027783	Bog Forest Soil	MRHHFKAELRSWLNKIPRIRLKPNARTGSFKFYFDPLFDYPFGGVEIHNTRALMEFISSEYDGIRPTIPPEEMATWLKEFHTKLSQALHNGEAVIEMVPE
Ga0209448_102757202	3300027783	Bog Forest Soil	RFYFDPLFDYPFGGVEVPNMRALMGLISSQYEDQEPAETPENMIEWLKGFHTQLAQRLHNGEAVLDLIPD
Ga0209448_103050661	3300027783	Bog Forest Soil	FPFPEELRQHFRKELRSWLNRIQRLRLKPDTRTGSVKFYFDPLFDYPFGGIEVPNMRALMEFLSSEYDGIRPSRSPDEMAAWLRGFHTRLAEALHNGEAVLDLLPE
Ga0209693_100914992	3300027855	Soil	LQAHFERELRNWLEEIQRIRLKPTTGTGSFRFHFDPLFDYPFGGVEVQNIRARMDFISGEYEGAKPTKTPEAMAQWLKQFHTVLSERLHNGETVLDLIPE
Ga0209380_100034746	3300027889	Soil	LEEIQRIRLKPTTGTGSFRFYFDPLFDYPFGGVEVQNIRARMDFISGEYEGAKPTKTPEAMAQWLKQFHTVLSERLHNGETVLDLIPE
Ga0209488_107735942	3300027903	Vadose Zone Soil	LNEIQRIRLKPTTRTGSFRFYFDPLFDYPFGGIEVPNMRALMEFISSEYDEIRSTKSPEELVEWLKGFQTELAQHLHNGEAVLDMIPD
Ga0308309_104630602	3300028906	Soil	LQAHFERELRNWLEEIQRIRLKPTTGTGSFRFYFDPLFDYPFGGVEVQNIRARMDFISGEYEGAKPTKTPEAMAQWLKQFHTVLSERLHNGETVLDLIPE
Ga0318516_104414542	3300031543	Soil	IRLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0318538_103027592	3300031546	Soil	DPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0318573_104768092	3300031564	Soil	GSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0318574_101488791	3300031680	Soil	ELRCHFKHELENWLDEIQRIRLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0310686_1076027841	3300031708	Soil	ELRRHFKHELEDWLDEIQRIRLNPTTRTGSFKFYFDPLFDYPFGGIEVPNMRAMLQFISSRYDNIQPTKSPEELVAWLAEFHAFTEGKRFSI
Ga0307476_108741181	3300031715	Hardwood Forest Soil	AELRSWLNKIQRIRLKPNAQTGSFKFYFDPLFDYPFGGVEIHNARALMEFISSEYGGIRPAISPEEMAIWLKEFHAKLAQALHNGEAALDRVPE
Ga0318500_100998462	3300031724	Soil	TGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0318500_106109101	3300031724	Soil	LKPTTRTGSFKFYFDPLFDYPFGGIEAPNMRALMNFISGEYDEIRPTKSPEEVVVWLRRFHTDLAQRLHNGEAVLDMIPE
Ga0318501_103510161	3300031736	Soil	TRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0306918_100608414	3300031744	Soil	IRLKPTTRAGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0318502_102292962	3300031747	Soil	LKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0318521_105369281	3300031770	Soil	FRRELRNWLDEIQRIRLKPTTRTGSFKFYFDPLFDYPFGGIEAPNMRALMNFISGEYDEIRPTKSPEEVVVWLRRFHTDLAQRLHNGEAVLDMIPE
Ga0318546_103473762	3300031771	Soil	DEIQSIRLKPTTRTGSFKFYFDPLFDYPFGGIEAPNMRALMNFISGEYDEIRPTKSPEEVVVWLRRFHTDLAQRLHNGEAVLDMIPE
Ga0318543_100292331	3300031777	Soil	TTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0318548_106135781	3300031793	Soil	LFDYPFGGIEAPNMRALMDFISSEYDEIRPTKSPEEVVVWLRRFHTDLAQRLHNGEAVLDMIPE
Ga0318567_105068221	3300031821	Soil	NWLDEIQSIRLKPTTRTGSFKFYFDPLFDYPFGGIEAPNMRALMNFISGEYDEIRPTKSPEEVVVWLRRFHTDLAQRLHNGEAVLDMIPE
Ga0318512_102224812	3300031846	Soil	FSFSPELRRHFKHELENWLDEIQRIRLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0318495_100784531	3300031860	Soil	LKPTTRAGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0318551_100397341	3300031896	Soil	QLRDHFRRELRNWLDEIQRIRLKPTTRTGSFKFYFDPLFDYPFGGIEAPNMRALMNFISSEYDEIRPTKSPEEVVVWLRRFHTDLAQRLHNGEAVLDMIPE
Ga0318551_101047061	3300031896	Soil	LFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0306923_100034261	3300031910	Soil	KPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0306923_120579982	3300031910	Soil	HFKHELENWLDEIQRIRLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0306921_122788861	3300031912	Soil	HELENWLDEIQRIRLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0310916_100480501	3300031942	Soil	IRLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0310913_100136081	3300031945	Soil	TTRAGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0310913_105366452	3300031945	Soil	TTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0310909_100823891	3300031947	Soil	IRLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0306926_1000021751	3300031954	Soil	FYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0318569_100416001	3300032010	Soil	SFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0310911_105384131	3300032035	Soil	GSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0318559_102346222	3300032039	Soil	ELRNWLDEIQRIRLKPTARTGSFKFYFDPLFDYPFGGIEAPNMRALMDFISSEYDEIRPTKSPEEVVVWLRRFHTDLAQRLHNGEAVLDMIPE
Ga0318558_106534742	3300032044	Soil	DEIQRIRLKPTTRTGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0318532_102103302	3300032051	Soil	TRAGSFKFYFDPLFDYPFGGIEVQNMRAMMQFVSSRCESIEPTKSPEELVAWLKEFHRELAGRLHRGEAVLDMIPE
Ga0318518_105448302	3300032090	Soil	EIQRIRLKPTTRTGSFKFYFDPLFDYPFGGIEAPNMRALMNFISSEYDEIRPTKSPEEVVVWLRRFHTDLAQRLHNGEAVLDMIPE
Ga0318540_100161831	3300032094	Soil	DYPFGGIEVQNMRAMMQFVSSRYENIQPMKSPEELVAWLKEFHMELAGRLHRGEAVLDMIPE
Ga0348332_110750982	3300032515	Plant Litter	RIRLKPETRTGSFKFYFDPLFDYPFGGVEVPNMRALMEFISSEYDGIRPSRSPEETAAWLKRFHTSLAEALHNGEAVLDLLPE
Ga0318519_110632721	3300033290	Soil	FKFYFDPLFDYPFGGIEVPNMRALMDFISSEYDEISPTKSPEELVSWLRRFHTELAQRLHNGEAVLDMIPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078984

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences