Metagenome / Metatranscriptome Family F079000

Basic Information
Family ID	F079000
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	47 residues
Representative Sequence	AYDGADDWARELLEEADPDAPPSAEPGTVADAAFHVYARGAADYRP
Number of Associated Samples	100
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.28 %
% of genes from short scaffolds (< 2000 bps)	93.97 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Unclassified (58.621 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.483 % of family members)
Environment Ontology (ENVO)	Unclassified (30.172 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.966 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.19% β-sheet: 0.00% Coil/Unstructured: 60.81%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF12728	HTH_17	74.14
PF00376	MerR	6.03
PF01569	PAP2	2.59
PF01638	HxlR	0.86
PF01381	HTH_3	0.86
PF07295	DUF1451	0.86
PF00733	Asn_synthase	0.86
PF03009	GDPD	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.86
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
All Organisms	root	All Organisms	41.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
cellular organisms	root	All Organisms → cellular organisms	41.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.86 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.07 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	12.07 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.07 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.07 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig73704	Not Available	718	Open in IMG/M
2170459004\|F62QY1Z02I8JBM	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300001398\|JGI20207J14881_1024200	Not Available	1419	Open in IMG/M
3300001534\|A15PFW1_10356211	Not Available	673	Open in IMG/M
3300001686\|C688J18823_10499936	Not Available	780	Open in IMG/M
3300002568\|C688J35102_118217777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300002568\|C688J35102_120188257	Not Available	918	Open in IMG/M
3300005167\|Ga0066672_10659472	Not Available	675	Open in IMG/M
3300005171\|Ga0066677_10612157	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300005187\|Ga0066675_10623899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300005327\|Ga0070658_11950718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300005344\|Ga0070661_101647835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300005458\|Ga0070681_10237923	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300005518\|Ga0070699_102203227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300005529\|Ga0070741_10486781	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300005530\|Ga0070679_100113142	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300005530\|Ga0070679_100184644	Not Available	2057	Open in IMG/M
3300005553\|Ga0066695_10806241	Not Available	541	Open in IMG/M
3300005557\|Ga0066704_10365776	Not Available	965	Open in IMG/M
3300005563\|Ga0068855_100463370	Not Available	1382	Open in IMG/M
3300005564\|Ga0070664_101923281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300005616\|Ga0068852_102328413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300005764\|Ga0066903_105960379	Not Available	639	Open in IMG/M
3300006028\|Ga0070717_11441733	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300006032\|Ga0066696_10611407	Not Available	707	Open in IMG/M
3300006175\|Ga0070712_101708394	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300006638\|Ga0075522_10326499	Not Available	739	Open in IMG/M
3300006804\|Ga0079221_10521670	Not Available	777	Open in IMG/M
3300009093\|Ga0105240_12221050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300009098\|Ga0105245_10882980	Not Available	935	Open in IMG/M
3300010229\|Ga0136218_1006967	Not Available	1189	Open in IMG/M
3300010301\|Ga0134070_10139828	Not Available	863	Open in IMG/M
3300010358\|Ga0126370_11611466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300010362\|Ga0126377_11723211	Not Available	702	Open in IMG/M
3300010373\|Ga0134128_11668384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	701	Open in IMG/M
3300010375\|Ga0105239_12831025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300010396\|Ga0134126_11145941	Not Available	866	Open in IMG/M
3300010399\|Ga0134127_11981855	Not Available	660	Open in IMG/M
3300010399\|Ga0134127_12577777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300010399\|Ga0134127_13534305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300010400\|Ga0134122_11750945	Not Available	651	Open in IMG/M
3300012203\|Ga0137399_11421911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300012212\|Ga0150985_104116522	Not Available	2731	Open in IMG/M
3300012930\|Ga0137407_11675771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300012951\|Ga0164300_10224567	Not Available	936	Open in IMG/M
3300012958\|Ga0164299_10316000	Not Available	967	Open in IMG/M
3300012958\|Ga0164299_10959553	Not Available	626	Open in IMG/M
3300012960\|Ga0164301_10011050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3653	Open in IMG/M
3300012960\|Ga0164301_11217812	Not Available	606	Open in IMG/M
3300012961\|Ga0164302_11140437	Not Available	619	Open in IMG/M
3300012985\|Ga0164308_11430742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300012986\|Ga0164304_10710824	Not Available	764	Open in IMG/M
3300012988\|Ga0164306_10543000	Not Available	901	Open in IMG/M
3300012989\|Ga0164305_10136269	Not Available	1643	Open in IMG/M
3300012989\|Ga0164305_11389267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300013104\|Ga0157370_11320226	Not Available	650	Open in IMG/M
3300013105\|Ga0157369_11179576	Not Available	782	Open in IMG/M
3300013307\|Ga0157372_12688480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300013765\|Ga0120172_1128059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300013766\|Ga0120181_1118584	Not Available	578	Open in IMG/M
3300013772\|Ga0120158_10348507	Not Available	697	Open in IMG/M
3300014497\|Ga0182008_10808041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	545	Open in IMG/M
3300014827\|Ga0120171_1076305	Not Available	909	Open in IMG/M
3300014829\|Ga0120104_1117595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300014969\|Ga0157376_10463410	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300015203\|Ga0167650_1093064	Not Available	683	Open in IMG/M
3300015245\|Ga0137409_10456286	Not Available	1098	Open in IMG/M
3300015374\|Ga0132255_106097114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300017936\|Ga0187821_10245389	Not Available	698	Open in IMG/M
3300017959\|Ga0187779_10010911	Not Available	5201	Open in IMG/M
3300018058\|Ga0187766_11403783	Not Available	513	Open in IMG/M
3300018482\|Ga0066669_10277080	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300020070\|Ga0206356_10076663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300020070\|Ga0206356_10482114	Not Available	864	Open in IMG/M
3300020081\|Ga0206354_10561604	Not Available	1229	Open in IMG/M
3300020082\|Ga0206353_10902396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300025482\|Ga0208715_1096354	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300025703\|Ga0208357_1080923	Not Available	993	Open in IMG/M
3300025906\|Ga0207699_10836744	Not Available	677	Open in IMG/M
3300025909\|Ga0207705_10501002	Not Available	943	Open in IMG/M
3300025909\|Ga0207705_10836133	Not Available	714	Open in IMG/M
3300025912\|Ga0207707_10496364	Not Available	1041	Open in IMG/M
3300025913\|Ga0207695_10205502	Not Available	1882	Open in IMG/M
3300025914\|Ga0207671_11544415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300025920\|Ga0207649_10334068	Not Available	1117	Open in IMG/M
3300025920\|Ga0207649_10945804	Not Available	677	Open in IMG/M
3300025920\|Ga0207649_11419593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300025921\|Ga0207652_11664287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300025924\|Ga0207694_10771901	Not Available	812	Open in IMG/M
3300025924\|Ga0207694_11485958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300025929\|Ga0207664_10411715	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300025944\|Ga0207661_10995943	Not Available	772	Open in IMG/M
3300025944\|Ga0207661_11747680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300025986\|Ga0207658_10438469	Not Available	1154	Open in IMG/M
3300026330\|Ga0209473_1221268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300027821\|Ga0209811_10153279	Not Available	855	Open in IMG/M
3300027821\|Ga0209811_10398201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300027826\|Ga0209060_10171238	Not Available	1004	Open in IMG/M
3300027875\|Ga0209283_10282704	Not Available	1097	Open in IMG/M
3300031249\|Ga0265339_10061960	All Organisms → cellular organisms → Bacteria → Proteobacteria	2012	Open in IMG/M
3300031680\|Ga0318574_10114855	Not Available	1505	Open in IMG/M
3300031793\|Ga0318548_10359772	Not Available	714	Open in IMG/M
3300031795\|Ga0318557_10058764	Not Available	1636	Open in IMG/M
3300031821\|Ga0318567_10830946	Not Available	523	Open in IMG/M
3300031939\|Ga0308174_10936252	Not Available	733	Open in IMG/M
3300031939\|Ga0308174_11846629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300031942\|Ga0310916_11118464	Not Available	654	Open in IMG/M
3300031942\|Ga0310916_11184935	Not Available	632	Open in IMG/M
3300032074\|Ga0308173_10807041	Not Available	864	Open in IMG/M
3300032829\|Ga0335070_10217698	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300032893\|Ga0335069_12485764	Not Available	536	Open in IMG/M
3300032896\|Ga0335075_10196127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2424	Open in IMG/M
3300032898\|Ga0335072_11606566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300034195\|Ga0370501_0367225	Not Available	524	Open in IMG/M
3300034268\|Ga0372943_0645407	Not Available	697	Open in IMG/M
3300034384\|Ga0372946_0663165	Not Available	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.86%
Host-Associated	Host-Associated	22.41%
Engineered	Engineered	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Plants	Host-Associated → Plants	22.41%
Aquatic	Environmental → Aquatic	0.86%
Lab Enrichment	Engineered → Lab Enrichment	0.86%
Modeled	Engineered → Modeled	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Unclassified	Engineered → Lab Enrichment → Unclassified	0.86%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.31%
Loam	Environmental → Terrestrial → Soil → Loam	14.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.34%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.86%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified	0.86%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.34%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	8.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.03%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.86%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified	0.86%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.17%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.86%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.86%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%
Soil	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil	0.86%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
3300001398	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010229	Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 1	Engineered	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0704.00004990	2166559005	Simulated	KRVGQVFTLGELADAYDGADEWARSLLDDADPDAPPATEPGTVADAAFHAYARGAADYRP
E4B_06196290	2170459004	Grass Soil	ARDAIDRADPEAPPPTELPAVTGAAFRQYARGATDYRP
JGI20207J14881_10242001	3300001398	Arctic Peat Soil	ADEWARSLLADADPDAPVISEPGTVADAAFHLFARGASDYSP*
A15PFW1_103562111	3300001534	Permafrost	AYEGADEWARELLEDAAGPDAPPTVEAGTVADAAFHLYARGAVDYRP*
C688J18823_104999361	3300001686	Soil	LLDDADPEGPPAAEAGTVADAAFHVYARGATDYRP*
C688J35102_1182177771	3300002568	Soil	AYEGADEWARMLLDDADPEGGPSHEPGTVADAAFHAYARGALDYQP*
C688J35102_1201882571	3300002568	Soil	EWVRELLDEAEPDAPPPTEPGTIADAAFHVYAHGAVDYRP*
Ga0066672_106594721	3300005167	Soil	AYDGADDWARELLEEADPDAPPSAEPGTVADAAFHVYARGAADYRP*
Ga0066677_106121571	3300005171	Soil	AYVGADDWVRELLEEADPEGVPAEPGTVADAAFHVYARGALDYRP*
Ga0066675_106238993	3300005187	Soil	DWVRELLEEADPEGVPAEPGTVADAAFHVYARGALDYRP*
Ga0070658_119507183	3300005327	Corn Rhizosphere	DEWARELLEAAADPEAPPTAEAGTVADAAFHAYARGAVDYRP*
Ga0070661_1016478351	3300005344	Corn Rhizosphere	WVRELLDEADPEAPVPTEPGTIADAAFHAYARGALDYRP*
Ga0070681_102379231	3300005458	Corn Rhizosphere	ELAAAYDGADEWARTLLDEAEPEAPVTAEPGTLADAAFHAYARGASDYRP*
Ga0070699_1022032271	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LAELADAYDGADDWARSLLDDADPDAAPVAEPGTVADAAFHLYARGATDYRP*
Ga0070741_104867811	3300005529	Surface Soil	LAELASVYDGADDWVRDMLEEADPEGKTPREPGTVADAAFHAYARSALDYRP*
Ga0070679_1001131426	3300005530	Corn Rhizosphere	RVGQVFTLAELAAAYDGADEWARTLLDEAEPEAPVTAEPGTLADAAFHAYARGASDYRP*
Ga0070679_1001846446	3300005530	Corn Rhizosphere	AYEGADEWTRELLEAAADPEAPPTAEAGTVADAAFHAYARGAVDYRP*
Ga0066695_108062413	3300005553	Soil	TLAELADAYDGADDWARELLDAADPEAPPAAEAGTVADAAFHVYARGATDYRP*
Ga0066704_103657761	3300005557	Soil	ARELLEAAADPDEPPAPEAGTVADAAFHAYARGAVDYRP*
Ga0068855_1004633701	3300005563	Corn Rhizosphere	GAYDGADEWARSLLADADPDAPVISEPGTVADAAFHVFARGASDYAP*
Ga0070664_1019232811	3300005564	Corn Rhizosphere	LDELAGAYDGADEWARSLIDDADPEGTPTAEPGTVADAAFHAYARGAADYTP*
Ga0068852_1023284131	3300005616	Corn Rhizosphere	AALYGGADGWVLELLDAADPEGELPFEPGTVADAAFHAYSRGAVDYRP*
Ga0066903_1059603793	3300005764	Tropical Forest Soil	LEDADPDGTVPAEPGTVADAAFHAYARGALDYRP*
Ga0070717_114417333	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAELADAYDGADEWARGLIDDADPEAAPADEPGTVADAAFHLYARGAADYEP*
Ga0066696_106114073	3300006032	Soil	GQVFTLAELADAYDGADDWARELLDAADPEAPPAAEAGTVADAAFHVYARGATDYRP*
Ga0070712_1017083943	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	FTLDELADTYAGADDWARDAIDRADPDAPPPTELPAVTGAAFRQYARGATDYRP*
Ga0075522_103264991	3300006638	Arctic Peat Soil	DDWARELLDDAAEPDAPPTAEAGTVADAAFHLYARGAVDYRP*
Ga0079221_105216703	3300006804	Agricultural Soil	GADHWVLELLEEADPEGAVPFEPGTVADAAFHAYARGAVDYRP*
Ga0105240_122210503	3300009093	Corn Rhizosphere	YGGADGWVLELLEDADPNGAAPVEPGTIADAAFHAYARGAVDYRP*
Ga0105245_108829803	3300009098	Miscanthus Rhizosphere	LLDEADPEAPPPFEPGTVADAAFYQYARGAADYAP*
Ga0136218_10069673	3300010229	Soil	XXXXDDWVLELLEDGDPEGRVPLEPGTVADAAFHAYARGAVDYRP*
Ga0134070_101398283	3300010301	Grasslands Soil	GADDWARELLDAAADPDAPPTAEAGTVADAAFHAYARGAVDYRP*
Ga0126370_116114661	3300010358	Tropical Forest Soil	AYGGADDWVLELLEDADPEGRVPLEPGTVADAAFHAYARGAVDYRP*
Ga0126377_117232111	3300010362	Tropical Forest Soil	RVGQVFTLGELADAYDGADEWARNLLDDVDPDAPPTTEPGTVADAAFHAYARGAADYRP*
Ga0134128_116683843	3300010373	Terrestrial Soil	PARVRELVDAYDGADDWARELLEDADPDAPPAVEAGTVADAAFHAYARGAADYRP*
Ga0105239_128310251	3300010375	Corn Rhizosphere	LADAYDGADEWARTLLDDADPDAAPATEPGTIADAAFHLYARGATDYRP*
Ga0134126_111459413	3300010396	Terrestrial Soil	EVGQTFTLAELADAYVGADDWARTLLDEADPDAPPPLEPGTVADAAFYQYARGASDYAP*
Ga0134127_119818551	3300010399	Terrestrial Soil	DEWARTLLDDADPDAAPATEPGTIADAAFHLYARGATDYRP*
Ga0134127_125777771	3300010399	Terrestrial Soil	AYGGADDWVLELLEDTDPDGAVPLEPGTVADAAFHAYARGAVDYRP*
Ga0134127_135343051	3300010399	Terrestrial Soil	WVLELLEDADPNGAAPVEPGTIADAAFHAYARGAVDYRP*
Ga0134122_117509453	3300010400	Terrestrial Soil	LADAYVGADDWARTLLDEADPEAPPPLEPGTVADAAFYQYARGASDYAP*
Ga0137399_114219113	3300012203	Vadose Zone Soil	VAGLRRRLGQVFTLAELAAAYSGADDWARELLEDADPEAPLAAEPGTIADAAFHVYARGATDYRP*
Ga0150985_1041165228	3300012212	Avena Fatua Rhizosphere	VLELLDEAEPEAPPAAEAGTVADAAFHLYARGAVDYRP*
Ga0137407_116757711	3300012930	Vadose Zone Soil	ELAAAYGGADDWVRDLLEDADPDGGVPTEPGTIADAAFHAYARGALDYRP*
Ga0164300_102245671	3300012951	Soil	IGQTFTLGELAEAYDGADEWTRTLLEDVDPDAPPVLEPGTVADAAFHQYARGAVDYAP*
Ga0164299_103160003	3300012958	Soil	ARELLEAAAAPEAPPTAEAGTVADAAFHAYARGAVDYRP*
Ga0164299_109595533	3300012958	Soil	DELAGAYDGADEWARSLIDDADPEGMPSSEPGTVADAAFHAYARGATDYSP*
Ga0164301_100110501	3300012960	Soil	DEWTRTLLEDVDPDAPPVLEPGTVADAAFHQYARGAVDYAP*
Ga0164301_112178123	3300012960	Soil	VDRWAGAAIEEADPEESPATEPGTVADAAFHLYARGATDYRP*
Ga0164302_111404373	3300012961	Soil	RELLEAAADPEAPPTAEAGTVADAAFHAYARGAVDYRP*
Ga0164308_114307423	3300012985	Soil	GQIFTLDELAGAYDGADEWARTLLDDADPEGAPSHEPGTVSDAAFHAYARGATDYQP*
Ga0164304_107108243	3300012986	Soil	VFTLDELAGAYDGADEWARSLIDDADPEGMPSSEPGTVADAAFHAYARGATDYSP*
Ga0164306_105430001	3300012988	Soil	ARELLEDAEPDAPPAVEAGTVADAAFHAYARGAADYRP*
Ga0164305_101362695	3300012989	Soil	ARELLEAAADPEAPPTAEAGTVADAAFHAYARGAVDYRP*
Ga0164305_113892673	3300012989	Soil	ELADAYDGADEWARELLDDVEPDAPPALEAGTVADAAFHVYARGATDYRP*
Ga0157370_113202263	3300013104	Corn Rhizosphere	VLELLEDTDPEGAVPLEPGTVADAAFHAYARGAVDYRP*
Ga0157369_111795763	3300013105	Corn Rhizosphere	AYDGADEWVRDVLDEADPEGPGPSEPGTVADAAFHVYAHGAADYRP*
Ga0157372_126884802	3300013307	Corn Rhizosphere	DAYDGADEWAHSTLDDAQPDAPPTSEPGTLADAAFHVYARGALDYRP*
Ga0120172_11280591	3300013765	Permafrost	LAEAYDGADAWTGGLLEDADPEHAPATEPGTVADAAFHVYARGATDYHP*
Ga0120181_11185841	3300013766	Permafrost	ADEWARGLIDDADPEAPADEPGTVADAAFHLYARGAVDYRP*
Ga0120158_103485073	3300013772	Permafrost	FTLAELADAYDKADVWTGGLLDDADPDEAPATEPGTVADAAFHLYARGAADYHP*
Ga0182008_108080412	3300014497	Rhizosphere	AYEGADEWARELLEAAADPEAPPTAEAGTVADAAFHAYARGAVDYRP*
Ga0120171_10763053	3300014827	Permafrost	LEDAADPDEPPTAEAGTVADAAFHVYARGAVDYRP*
Ga0120104_11175953	3300014829	Permafrost	LIDDADPEGAPAAEPGTVADAAFHLYARGAVDYRP*
Ga0157376_104634101	3300014969	Miscanthus Rhizosphere	LLDDADPEGAPSHEPGTVSDAAFHAYARGAADYRP*
Ga0167650_10930641	3300015203	Glacier Forefield Soil	ADAYDGADEWARELLDDAADPDAPPAAEAGTVADAAFHVYARGAVDYRP*
Ga0137409_104562863	3300015245	Vadose Zone Soil	DVVVAGLRRRLGQVFTLAELAAAYAGADDWARELLEDADPEAPLAAEPGTIADAAFHVYARGATDYRP*
Ga0132255_1060971143	3300015374	Arabidopsis Rhizosphere	ELLDESDPEGPPPTEPGTVADAAFHAYARGAADYRP*
Ga0187821_102453891	3300017936	Freshwater Sediment	FTLVELADAYDGAEDWARDVVDLADPEAPPTADAAAVTDAAFHNYARGAADYRP
Ga0187779_100109111	3300017959	Tropical Peatland	DGADAWVRDLLDDEDPDGRPVVEAGTVADAAFHSYARGASDYRP
Ga0187766_114037833	3300018058	Tropical Peatland	ELADAYDGADDWVRELLEDRFPDAPPPHEPGTVADAAFHVYARSASDYRP
Ga0066669_102770801	3300018482	Grasslands Soil	GVYDGADEWARSLLDDADPEAPPVTEPGTVADAAFHLYARGATDYRP
Ga0206356_100766631	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	EELATAYDGVDDWVLELLEDGDPEGRVPLEPGTVADAAFHAYARGAVDYRP
Ga0206356_104821141	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	SFTLEELATAYDGVDDWVLELLEDGDPEGRVPLEPGTVADAAFHAYARGAVDYRP
Ga0206354_105616041	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	GADEWVRDVLDDADPEGPGPSEPGTVADAAFHVYAHGAADYRP
Ga0206353_109023961	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	GQTFTLAELANAYNGADDWARDAIDFADPDAPPPLEASTVTDAAFHRYAHGATDYIP
Ga0208715_10963542	3300025482	Arctic Peat Soil	EGADEWARELLEDAADPDAPPAAEAGTVADAAFHVYARGAVDYRP
Ga0208357_10809233	3300025703	Arctic Peat Soil	RSLLADADPDAPVISEPGTVADAAFHLFARGASDYSP
Ga0207699_108367441	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ELADAYDGADEWARELLDDVEPDAPPALEAGTVADAAFHVYARGATDYRP
Ga0207705_105010023	3300025909	Corn Rhizosphere	ELLEDTDPEGAVPLEPGTVADAAFHAYARGAVDYRP
Ga0207705_108361333	3300025909	Corn Rhizosphere	LAELSGAYDGADEWARSLLADADPDAPVISEPGTVADAAFHVFARGASDYAP
Ga0207707_104963641	3300025912	Corn Rhizosphere	ELAAAYDGADEWARTLLDEAEPEAPVTAEPGTLADAAFHAYARGASDYRP
Ga0207695_102055021	3300025913	Corn Rhizosphere	LAALYGGADGWVLELLDAADPEGELPFEPGTVADAAFHAYSRGAVDYRP
Ga0207671_115444153	3300025914	Corn Rhizosphere	GQSFTLDELAALYGGADGWVLELLDAADPEGELPFEPGTVADAAFHAYSRGAVDYRP
Ga0207649_103340684	3300025920	Corn Rhizosphere	LELLEDGDPEGRVPLEPGTVADAAFHAYARGAVDYRP
Ga0207649_109458041	3300025920	Corn Rhizosphere	DDWVLELLEETDPDGAVPLEPGTVADAAFHAYARGAVDYRP
Ga0207649_114195931	3300025920	Corn Rhizosphere	WVRELLDEADPEAPVPTEPGTIADAAFHAYARGALDYRP
Ga0207652_116642871	3300025921	Corn Rhizosphere	GVDDWVLELLEDGDPEGRVPLEPGTVADAAFHAYARGAVDYRP
Ga0207694_107719011	3300025924	Corn Rhizosphere	MISRPSLDEWAHSTLDDAQPDAPPTSEPGTLADAAFHVYARGALDY
Ga0207694_114859583	3300025924	Corn Rhizosphere	RTLLDEAEPEAPVTAEPGTLADAAFHAYARGASDYRP
Ga0207664_104117154	3300025929	Agricultural Soil	QSYDGADDWARAVLDEANPEAPPVSEAGTVADAAFHLYARGATDYRP
Ga0207661_109959431	3300025944	Corn Rhizosphere	AAYGAADDWVLELLEDADPDGAVPSEPGTVADAAFHAYARGAVDYRP
Ga0207661_117476803	3300025944	Corn Rhizosphere	YEGADEWTRELLEAAADPEAPPTAEAGTVADAAFHAYARGAVDYRP
Ga0207658_104384694	3300025986	Switchgrass Rhizosphere	VYADADAWVPHVLDDDDPETPVATEPGTVADAAFYAYARGAADYRP
Ga0209473_12212681	3300026330	Soil	RERVGQVFTLAELAAAYDGADDWARELLEEADPDAPPSAEPGTVADAAFHVYARGAADYR
Ga0209811_101532793	3300027821	Surface Soil	WARSLLDDADPEGLPSSEPGTVADAAFHAYARGAADYTP
Ga0209811_103982013	3300027821	Surface Soil	ADLAVAYDGADDWVRELLDESDPEGPPPTEPGTVADAAFHAYARGAADYRP
Ga0209060_101712383	3300027826	Surface Soil	YDGADDWVRDLLEDTNPDGAIPREPGTVMDAAFHAYARGALDYAP
Ga0209283_102827043	3300027875	Vadose Zone Soil	WARGLLDDADPEAAPADEPGTVADAAFHLYARGAVDYKP
Ga0265339_100619606	3300031249	Rhizosphere	DDWARHVLDDADPEAPPVSEAGTVADAAFHLYARGATDYRP
Ga0318574_101148554	3300031680	Soil	YDGADDWVRTALDLAADPDAPVPAEVPAVAGAAFHQYARGATDYRP
Ga0318548_103597721	3300031793	Soil	LDELAGAYDGADDWVRTALDLAADPDAPVPAEVPAVAGAAFHQYARGATDYRP
Ga0318557_100587645	3300031795	Soil	RRVGQTFTLAELADVYDGADGWVRELLDDEDPDGRPVVEAGTVADAAFHHYARGASDYRP
Ga0318567_108309461	3300031821	Soil	VYDGADGWVRELLDDEDPDGRPVVEAGTVADAAFHHYARGASDYRP
Ga0308174_109362521	3300031939	Soil	AHSTLDDARPDTPPTSEPGTLADAAFHVYARGALDYRP
Ga0308174_118466291	3300031939	Soil	DDWARTVLDDSDPEAPPTPTVGTLADAAFHQYARGASDYRP
Ga0310916_111184641	3300031942	Soil	AELADVYDGADGWVRELLDDEDPDGRPVVEAGTVADAAFHHYARGASDYRP
Ga0310916_111849351	3300031942	Soil	GADDWVRTALDLAADPDAPVPAEVPAVAGAAFHQYARGATDYRP
Ga0308173_108070413	3300032074	Soil	AAAYGGADDWVLELLEDADPEGGVPLEPGTAADAAFHAYARGAVDYRP
Ga0335070_102176981	3300032829	Soil	ADAYDGADDWARELLDDRFPDAVPHEPGTVTDAAFHVYARGASDYRP
Ga0335069_124857642	3300032893	Soil	TFTLEELAEVYDGADGWVHDLLDDADPDGRAVVEAGTVADAAFHHYARGASDYRP
Ga0335075_101961275	3300032896	Soil	WVLDTLDRADPDAPPPREAAAVADAAFHRYAVGATDYRP
Ga0335072_116065663	3300032898	Soil	LASAYDGADDWVRELLDEHEPDDAVPSEPGTVADAAFHSYARGAADYRP
Ga0370501_0367225_367_522	3300034195	Untreated Peat Soil	DELAEAYDGADDWARTVLDDAEPDAPPVAEAGTVADAAFHLYARGATDYRP
Ga0372943_0645407_512_691	3300034268	Soil	VGQVFTLDELADAYEGADEWARELLEAAADPDAPPTAEAGTVADAAFHAYARGAADYRP
Ga0372946_0663165_2_175	3300034384	Soil	QVFTLGELAEAYDGADDWARELLDAAADPDSPPTAEAGTVADAAFHSYARGAADYHP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079000

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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