NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F079043

Metagenome Family F079043

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F079043
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 58 residues
Representative Sequence VQPATKKLSVSAILFGILAGIIGIAAGLFLGFALGAALAAAFHVSTFEGEAG
Number of Associated Samples 104
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.76 %
% of genes near scaffold ends (potentially truncated) 91.38 %
% of genes from short scaffolds (< 2000 bps) 93.10 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.276 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(18.103 % of family members)
Environment Ontology (ENVO) Unclassified
(32.759 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.862 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 48.75%    β-sheet: 0.00%    Coil/Unstructured: 51.25%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF08695Coa1 76.72
PF04073tRNA_edit 2.59
PF01883FeS_assembly_P 2.59
PF13439Glyco_transf_4 1.72
PF03976PPK2 0.86
PF02729OTCace_N 0.86
PF01979Amidohydro_1 0.86
PF00534Glycos_transf_1 0.86
PF01957NfeD 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG2326Polyphosphate kinase 2, PPK2 familyEnergy production and conversion [C] 0.86

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.28 %
UnclassifiedrootN/A1.72 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459003|FZ032L002JBXEXAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia535Open in IMG/M
2170459009|GA8DASG01BWYB3All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia511Open in IMG/M
2199352025|deepsgr__Contig_168431All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia739Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100551225All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1110Open in IMG/M
3300000955|JGI1027J12803_100348653All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300000955|JGI1027J12803_109182902Not Available554Open in IMG/M
3300000956|JGI10216J12902_115629779All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300002899|JGIcombinedJ43975_10021848All Organisms → cellular organisms → Bacteria → Proteobacteria1029Open in IMG/M
3300004479|Ga0062595_100778706All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300004643|Ga0062591_102541202All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300005171|Ga0066677_10687555All Organisms → cellular organisms → Bacteria → Proteobacteria573Open in IMG/M
3300005174|Ga0066680_10091063All Organisms → cellular organisms → Bacteria1853Open in IMG/M
3300005179|Ga0066684_10928887All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium566Open in IMG/M
3300005186|Ga0066676_10855231All Organisms → cellular organisms → Bacteria → Proteobacteria613Open in IMG/M
3300005187|Ga0066675_10310633All Organisms → cellular organisms → Bacteria → Proteobacteria1143Open in IMG/M
3300005295|Ga0065707_10390228All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria865Open in IMG/M
3300005329|Ga0070683_101316962All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia694Open in IMG/M
3300005367|Ga0070667_101139900All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300005434|Ga0070709_10776481All Organisms → cellular organisms → Bacteria → Proteobacteria750Open in IMG/M
3300005438|Ga0070701_10957507All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300005450|Ga0066682_10543538All Organisms → cellular organisms → Bacteria → Proteobacteria735Open in IMG/M
3300005450|Ga0066682_10564325All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300005553|Ga0066695_10261017All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300005614|Ga0068856_101538019All Organisms → cellular organisms → Bacteria → Proteobacteria679Open in IMG/M
3300005615|Ga0070702_100843820All Organisms → cellular organisms → Bacteria → Proteobacteria712Open in IMG/M
3300005764|Ga0066903_102515976All Organisms → cellular organisms → Bacteria → Proteobacteria997Open in IMG/M
3300005937|Ga0081455_10672705All Organisms → cellular organisms → Bacteria → Proteobacteria663Open in IMG/M
3300006175|Ga0070712_100053505All Organisms → cellular organisms → Bacteria2818Open in IMG/M
3300006796|Ga0066665_11041089All Organisms → cellular organisms → Bacteria → Proteobacteria625Open in IMG/M
3300006854|Ga0075425_102863179All Organisms → cellular organisms → Bacteria → Proteobacteria530Open in IMG/M
3300006881|Ga0068865_100994145All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300007265|Ga0099794_10289907All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia847Open in IMG/M
3300009012|Ga0066710_103467603All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia597Open in IMG/M
3300009137|Ga0066709_103047622All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia614Open in IMG/M
3300010048|Ga0126373_10513180All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1243Open in IMG/M
3300010303|Ga0134082_10355468All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia621Open in IMG/M
3300010320|Ga0134109_10177248All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia778Open in IMG/M
3300010322|Ga0134084_10108095All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia896Open in IMG/M
3300010329|Ga0134111_10139301All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia954Open in IMG/M
3300010335|Ga0134063_10391915All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia680Open in IMG/M
3300010335|Ga0134063_10541572All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia587Open in IMG/M
3300010335|Ga0134063_10616389All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia554Open in IMG/M
3300010359|Ga0126376_11508015All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia701Open in IMG/M
3300010376|Ga0126381_101003589All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1204Open in IMG/M
3300010397|Ga0134124_12576584All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300012199|Ga0137383_10142186All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1755Open in IMG/M
3300012201|Ga0137365_10263999All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1279Open in IMG/M
3300012202|Ga0137363_10796433All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia801Open in IMG/M
3300012208|Ga0137376_10973599All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia727Open in IMG/M
3300012211|Ga0137377_10121935All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2485Open in IMG/M
3300012285|Ga0137370_10997274All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia516Open in IMG/M
3300012349|Ga0137387_10164938All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1582Open in IMG/M
3300012349|Ga0137387_10327533All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1108Open in IMG/M
3300012359|Ga0137385_10870190All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia746Open in IMG/M
3300012361|Ga0137360_10843148All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia789Open in IMG/M
3300012918|Ga0137396_11073335All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia578Open in IMG/M
3300012927|Ga0137416_10129357All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1946Open in IMG/M
3300012944|Ga0137410_11217152All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter649Open in IMG/M
3300012971|Ga0126369_10609202All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1163Open in IMG/M
3300012971|Ga0126369_11923519All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia680Open in IMG/M
3300012972|Ga0134077_10152367All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia923Open in IMG/M
3300012989|Ga0164305_10277206All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1227Open in IMG/M
3300013297|Ga0157378_10535299All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1175Open in IMG/M
3300014166|Ga0134079_10078441All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1221Open in IMG/M
3300015357|Ga0134072_10418721All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia532Open in IMG/M
3300015359|Ga0134085_10069934All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1427Open in IMG/M
3300015359|Ga0134085_10509433All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia551Open in IMG/M
3300015373|Ga0132257_100601050All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1359Open in IMG/M
3300016404|Ga0182037_11904261All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium532Open in IMG/M
3300017654|Ga0134069_1256648All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia609Open in IMG/M
3300018028|Ga0184608_10111410All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1152Open in IMG/M
3300018028|Ga0184608_10194998All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus886Open in IMG/M
3300018028|Ga0184608_10324257All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia676Open in IMG/M
3300018054|Ga0184621_10214440All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia689Open in IMG/M
3300018433|Ga0066667_10108778All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1865Open in IMG/M
3300018433|Ga0066667_10590727All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus925Open in IMG/M
3300019870|Ga0193746_1027321All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia587Open in IMG/M
3300019878|Ga0193715_1056520Not Available838Open in IMG/M
3300019878|Ga0193715_1069705All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia739Open in IMG/M
3300019879|Ga0193723_1114380All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus753Open in IMG/M
3300019883|Ga0193725_1119001All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia604Open in IMG/M
3300019885|Ga0193747_1090844All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia746Open in IMG/M
3300019890|Ga0193728_1300131All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia610Open in IMG/M
3300020001|Ga0193731_1138669All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia606Open in IMG/M
3300020010|Ga0193749_1055952All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia751Open in IMG/M
3300020018|Ga0193721_1025891All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1554Open in IMG/M
3300021178|Ga0210408_10037349All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus3822Open in IMG/M
3300021344|Ga0193719_10003007All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus6793Open in IMG/M
3300022534|Ga0224452_1041921All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1346Open in IMG/M
3300025315|Ga0207697_10021930All Organisms → cellular organisms → Bacteria2616Open in IMG/M
3300025907|Ga0207645_10909135All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia598Open in IMG/M
3300025910|Ga0207684_11440339All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia563Open in IMG/M
3300025928|Ga0207700_10883130All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia800Open in IMG/M
3300025936|Ga0207670_10868756All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia754Open in IMG/M
3300026297|Ga0209237_1210383All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia614Open in IMG/M
3300026305|Ga0209688_1023155All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1203Open in IMG/M
3300026308|Ga0209265_1166838All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium575Open in IMG/M
3300026317|Ga0209154_1273693All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia566Open in IMG/M
3300026317|Ga0209154_1310443All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia518Open in IMG/M
3300026318|Ga0209471_1332268All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia504Open in IMG/M
3300026323|Ga0209472_1034077All Organisms → cellular organisms → Bacteria2303Open in IMG/M
3300026343|Ga0209159_1283658All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium505Open in IMG/M
3300026538|Ga0209056_10730052All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia502Open in IMG/M
3300026540|Ga0209376_1076512All Organisms → cellular organisms → Bacteria1797Open in IMG/M
3300026557|Ga0179587_10452507All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia840Open in IMG/M
3300026816|Ga0207509_103967All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia725Open in IMG/M
3300028379|Ga0268266_10099100All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2565Open in IMG/M
3300028768|Ga0307280_10407879All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia508Open in IMG/M
3300028884|Ga0307308_10645583All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia507Open in IMG/M
3300031057|Ga0170834_107013781All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia793Open in IMG/M
3300031231|Ga0170824_108391846All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium512Open in IMG/M
3300031446|Ga0170820_14184372All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia504Open in IMG/M
3300031474|Ga0170818_112036887All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia656Open in IMG/M
3300031823|Ga0307478_11642067All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300031941|Ga0310912_10820505All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300033475|Ga0310811_10160557All Organisms → cellular organisms → Bacteria2812Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil18.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil11.21%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.17%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.31%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.31%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.45%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.72%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.72%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.86%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.86%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.86%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.86%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.86%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.86%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.86%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.86%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.86%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.86%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.86%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.86%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459003Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002899Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019870Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026816Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-B (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4A_098052802170459003Grass SoilVQPATKKLSVSSILFGILAGIIGIVAGLFLGFALGAALAAAFHVSTFEGEAGYFAAAWRS
F47_061102102170459009Grass SoilVQLDTKKLSVSSILFGIFAGIIGIAAGLFLGFALGAALAAAFHVSMFEGEAGYFAAAIALIVTCVVAPGL
deepsgr_028277202199352025SoilVQPATKKLSVSTIFFGIIAGIIGIGAGLFLGFALGAALAAAFHVSTFEGEAG
INPhiseqgaiiFebDRAFT_10055122533300000364SoilMNSYHQVQTTTKKLSISAILFXILAGFIXVGGGLILGXALGSAXAAALHVSPMEGGAGYF
JGI1027J12803_10034865313300000955SoilVQPGTKKLSVGAILFGILAGIIGIGGGLFLGFALGAALAAAFHVSTFEGEAGYFA
JGI1027J12803_10918290223300000955SoilSAILFGILAGVVGVAAGLGFGIALGSVLAAAFHVSPMEGGAGYFAVAIALIVALVVTPA
JGI10216J12902_11562977923300000956SoilLRPAIKNLSVDAILLGILGGIIGIATGLFLGFALGSALAAAFHVSTF
JGIcombinedJ43975_1002184833300002899SoilLQAATKKLSVSAILFGILAGLIGVGGGLILGFALGSALAAALHVSPMEGGAGYLAVAIAFIVTLIVTPST
Ga0062595_10077870613300004479SoilVLYIARATGGPVALTSFVQPATTKLSVSAVLFGILGGIVGIGTGLFLGFASGAALAA
Ga0062591_10254120213300004643SoilVAPVALISFVQPATTKLSVSAVLYGILGGIVGIGAGLFLGFALGAALAAVFHVSTFEGE
Ga0066677_1068755523300005171SoilVKPAINKLSVSAILFGILGGILGIAAGLFLGFALGAALAAALHVPS
Ga0066680_1009106333300005174SoilVKAAINTLSVSAILFGILAGIIGIGAGLFLGFALGAALAASLHVPSREGEATVTLPLP*
Ga0066684_1092888723300005179SoilLQAAAKKLPVSAILFGILAGIVGIGGGLFLGFGVGAALAAALHVSTFEGEAGYFAAAIA
Ga0066676_1085523123300005186SoilVKPAINKLSVSAILFGILGGILGIAAGLFLGFALGAALAAALHVPSREGESGYFAVAIAL
Ga0066675_1031063313300005187SoilVKAAINKISVSAILLGILGGIIGLGAGLFLGFALGAALAAAFHVSTFEGEAGYF
Ga0065707_1039022813300005295Switchgrass RhizosphereMNSDHQLQAATKKLSVSDILFGIFAGFIGVGGGLILGLALGSALAAALHVSPM
Ga0070683_10131696233300005329Corn RhizosphereVQPPTKKLSVSAILFGIIAGIIGIGGGLFLGFALGAALAAAFHV
Ga0070667_10113990023300005367Switchgrass RhizosphereVAPVALISFVQPATTKLSVSTVLFDILGGIVGIGAGLFLGFALGAALAAVFHVSTFEG*
Ga0070709_1077648113300005434Corn, Switchgrass And Miscanthus RhizosphereVQLATKKLSVSAILFGILAGIVGIAAGLFLGFALGAALAAAFHVSTFEGEAGYFAAAI
Ga0070701_1095750723300005438Corn, Switchgrass And Miscanthus RhizosphereLQAATKKLPVSAILFGILAGIVGGVVGLVLGIFLGSALAAAFHVSPMEGGAGYFAV
Ga0066682_1054353823300005450SoilVQPAAKKLSVSAILFGILAGIIGIGAGLILGFALGSALAAALHVSTFEGEA
Ga0066682_1056432513300005450SoilMKAAINKLSVSSILFGILGGIIGIAAGLFLGFALGSVLAAALHVPSR
Ga0066695_1026101733300005553SoilMQPATKKLSVSAILFGILAGIVGIAAGLFLGFALGAALAAAFHVSTFEG
Ga0068856_10153801923300005614Corn RhizosphereVQLATKKLSVSAILFGILAGIVGIAAGLFLGFALGAALAAAFHVSTFEGEAGYFAA
Ga0070702_10084382013300005615Corn, Switchgrass And Miscanthus RhizosphereVQPATKKLSVSAILFGILAGIIGIGGGLFLGFALGAGLAAAFHVSTFEGEAGYFAVAI
Ga0066903_10251597613300005764Tropical Forest SoilMQATTKKLSVSAILFGILAGIVGLAAGLFLGFLLGGALSAAFHVSTFEGEAGYFAAA
Ga0081455_1067270523300005937Tabebuia Heterophylla RhizosphereVQLATKKPSVSAILFGILAGIIGIAAGLFLGFALGAALAAAFHVSRFEGEAGYFAAAIALIVTGIVA
Ga0070712_10005350573300006175Corn, Switchgrass And Miscanthus RhizosphereVQPATKKLSVNAILFGILAGIIGIAAGLFLGFALGAALAAAFHVSTFEGGAGYFAAAIALLVTCIVAPGL
Ga0066665_1104108913300006796SoilMEAALKKLSVSAILLGIIGGIIGLAAGLFLGFALGAILARVMHISSFEGGAGY
Ga0075425_10286317913300006854Populus RhizosphereVQAATKKLSVSAILFGILAGIIGIAAGLFLGFALGAGLAAAFHVSTFEG
Ga0068865_10099414513300006881Miscanthus RhizosphereVAPVALISFVQPATTKLSVSAVLFGILGGIVGIGAGLFLGFALGAALAAVF
Ga0099794_1028990733300007265Vadose Zone SoilVTAAINKLSVSAILFGIIAGIVGIGAGLFLGLALGAALAAAFHVSTFEGEAGYLPLQLR*
Ga0066710_10346760313300009012Grasslands SoilMEQPPPISGESKKLPLSAILFGILAGIVGAAVGLGLGFVLGSVLAAAFHVSTMEGEVGYFVVSIALLV
Ga0066709_10304762233300009137Grasslands SoilVQPATKKLSASAILFGILAGIIGIAAGLFLGFALGATLAAAFHVSTFEGEAGYFAAA
Ga0126373_1051318033300010048Tropical Forest SoilMQSATKGLSVSAVLLGIIGGIIGLAAGLSLGFALGAALASVFHVSSFEGGAGYFAVSIAILVTIL
Ga0134082_1035546813300010303Grasslands SoilVKPAINRLSVSAILFGILGGILGIAAGLFLGFALGAALATALHVPSREGESG
Ga0134109_1017724833300010320Grasslands SoilVKAAINNLSVSAILLAILGGIIGIGAGLFLGFALGAALATAFHVSTFEGEAGYF
Ga0134084_1010809513300010322Grasslands SoilMKAAINKLSVSSILFGILGGIIGIAAGLFLGFALGSVLAAALHVPSREGEAAYFTVAIALIVACIVVPVSILATLY
Ga0134111_1013930133300010329Grasslands SoilMKAAINKISVTAILFGILGGAIGIAAGLFLGFALGSALAAGFHVPAREGEAAYFTVAIALIVACIVTPGSILVTLYWR
Ga0134063_1039191523300010335Grasslands SoilMKAAINKISVTAILFGILGGASGIAAGLFLGFALGSALAAGFHVPAREGEAAYFTVAIALIVACIVTPGSILVTLYW
Ga0134063_1054157223300010335Grasslands SoilVKAAINNLSVSAILLAILGGIIGIGAGLFLGFALGEALAAVFHVSTFEGE
Ga0134063_1061638923300010335Grasslands SoilVKAAINNLSVSAILLAILGGIIGIGAGLFLGFALGAALAAAFHVSTFEGEAGYFAGMIAILVTLIVTPVSILL
Ga0126376_1150801513300010359Tropical Forest SoilVQSATKKLSLSAILFGILAGIIGIGAGLLLGFALGAILAKVLHVSSFEGGAGYFAI
Ga0126381_10100358913300010376Tropical Forest SoilLQAATKKLSFSAILFGILGGIIGLGAGLFLGFALGSALAATFHVSTFEG
Ga0134124_1257658413300010397Terrestrial SoilLQAATKKLPVSAILFGILVGIVGGVVGLVLGIFLGSALAAAFHVSPMEGGAGYFAVAIALLVGALVTPTSIVL
Ga0137383_1014218643300012199Vadose Zone SoilVRPATKKLSVSAILFGILAGIIGIVAGLFLGFALGAALAAMFHVSTFEGGAGYFAA
Ga0137365_1026399913300012201Vadose Zone SoilMQPTTKKLSVSAILFGILAGVIGIAGGLFLGFALGAALAAAFHVSTFEGEAGYF
Ga0137363_1079643323300012202Vadose Zone SoilVQPATKKLSVSAILFGILAGIIGITAGLFLGFALGAALAAAFHVSTFEGEAGYFAARSRYS*
Ga0137376_1097359933300012208Vadose Zone SoilVQPATKKLSVSAILLGILGGIVGIAAGLFLGFALGAALAAAFHVSTFEGEAGYFA
Ga0137377_1012193513300012211Vadose Zone SoilLQAATRKLSVSAILFGILAGFIGVEGGLILGFVLGGALAAALHVSTFEGEAG
Ga0137370_1099727423300012285Vadose Zone SoilVKAAINKISVSAILLGILGGIIGLGAGLFLGFALGAALAAAFHVSTFEGEAGYFAVMIAVLVTLIVT
Ga0137387_1016493813300012349Vadose Zone SoilVKAAINNLSVSAILLAILGGIIGIGAGLFLGFALGAALAAAFHVSTFEGEAGYFAV
Ga0137387_1032753333300012349Vadose Zone SoilVKAAINNLSVSAILLAILGGIIGIGAGLFLGFALGAALAAAFHVSTFEGEAGYFAVMIAVLVTLIVTPVSI
Ga0137385_1087019013300012359Vadose Zone SoilVQPATKKLSVSAILFGILGGIIGIVAGLFLGFALCAALAAMFHVSTFEGEAGYFA
Ga0137360_1084314833300012361Vadose Zone SoilVQPATKKLSVSAILFGILAGIIGIAAGLFLGFALGAALAAAFHVSTFEGEAG
Ga0137396_1107333523300012918Vadose Zone SoilLITPLEPATKKLSVSAILFGILAGIIGIAAGLFLGFALGAALAAAFHVSTFEGEAGYFAT
Ga0137416_1012935763300012927Vadose Zone SoilVQPATKKLSVSAILFGILGGIIGIAAGLFLGFALGSALAAAFHVSTFEGEAGYFA
Ga0137410_1121715213300012944Vadose Zone SoilVTKKLSVSAILFGILAGIIGIAAGLFLGFALGAALAAAFHVST
Ga0126369_1060920233300012971Tropical Forest SoilVQPATKKLSVTAILFGIVAGIIGIAGGLLLGFALGAGLAAAFHVSSFEGEAGYFAAAIALIVTCIVAPGPDCSYALLAQH
Ga0126369_1192351923300012971Tropical Forest SoilMKAAINKLSISAILFGILGGIIGIAAGLFLGFVLGSALAAALHVPGREGESGYFAVAIALIVTCIVTPVSILVTLY
Ga0134077_1015236713300012972Grasslands SoilVKAAINNLSVSAILLAILGGIIGIGAGLFLGFALGAALAAAFHVSTFEGEAGYFAGMIAILVTLIVTPVSILLTLY
Ga0164305_1027720613300012989SoilMQTGTNKLSVSSILFGIVGGIIGLAAGLFLGFALGAALASVFHVSSFEGG
Ga0157378_1053529933300013297Miscanthus RhizosphereVHLATTKLSVSAILFGILAGIVGIAAGLFLGFALGAALAAAFHVSTFEGE
Ga0134079_1007844113300014166Grasslands SoilVQSAIKNLSVSAILLGILAGIIGVGAGLFLGFALGAALAAAFHVSTFEGEAGYF
Ga0134072_1041872113300015357Grasslands SoilVQPATKKLSVSAILFGILAGIIGIAAGLFLGFALGAALAAAFHVSTFEGGAGYFAAAIAL
Ga0134085_1006993413300015359Grasslands SoilVTTPLQAATKKLPVSAILFGILAGIIGIAAGLFLGFALGAALAAAFHISTF
Ga0134085_1050943323300015359Grasslands SoilMKAAINKISVTAILFGILGGAIGIAAGLFLGFALGSALAAGFHVPAREGEAAYFTVAIALIVACIVTPGSILVTLYWRGVR
Ga0132257_10060105043300015373Arabidopsis RhizosphereVQPATKKLSVSAILFGILAGIIGIGGGLFLGFALGAGLAAAFHVSTFEGEAGYFA
Ga0182037_1190426113300016404SoilMQVASKKLSVSAILLGILGGIIGLAAGLSLGFALGAILARVLHISSFEGGAGYFAV
Ga0134069_125664813300017654Grasslands SoilMQPATKKLSVSAILFGILAGIIGVAAGLFLGFALGAALAAVFHVSTFEGGAGYFAAAIALIVTCIVAPGLIVLA
Ga0184608_1011141013300018028Groundwater SedimentMKAAINKLSVSSILFGILGGIIGIAAGLFLGFALGSVLAAAFHVPSREGEAAYFTVAIALIVTCIVT
Ga0184608_1019499823300018028Groundwater SedimentMNSDHQLQPATKKLSVSAILFGILAGFIGVGGGLVLGLALGSALAAALHVSPMEGGAGYFAVAIALIVTLIVITCRPIQ
Ga0184608_1032425713300018028Groundwater SedimentMNSDHQLRAETKKLSVSAILFGILAGFIGVGGGLILGLALGSALAAALHVSPMEGGAG
Ga0184621_1021444013300018054Groundwater SedimentVQPATRKLSVSTILFGIIAGIIGIGAGLFLGFALGAALAAAFHVSTFEGEAGYFAAAIAVLVTCVV
Ga0066667_1010877813300018433Grasslands SoilVQPATKKLSVSAILFGILAGIIGIAAGLFLGFALGAALAAAFHVSTFEGGAGYFAAAIALLVTCIVAPG
Ga0066667_1059072733300018433Grasslands SoilVQPATKKLSVGAILFGILAGIIGIAAGLFLGFALGAALAAALHVPAREGEAAYFTVAIALIVACIV
Ga0193746_102732113300019870SoilVQPATRKLSVSAILFGIITGIIGIGGGLFLGFALGAALAAAFHVSTFEGGA
Ga0193715_105652013300019878SoilLQAATKKLSVSAILFGILAGVVGVAVGLGFGIALGSVLAAAFHVSPMEGGAGYFAVA
Ga0193715_106970523300019878SoilVKAAINNLSVSAILLAILGGIIGIAAGLFLGFALGAALAAAFHVSTFEGEAGYFAVIIAILVTL
Ga0193723_111438013300019879SoilVKAAINNLSVSAILLAILGGIIGIGAGLFLGFALGAALAAAFHVSTFEGAAGY
Ga0193725_111900113300019883SoilVQIATKKLSISAILFGILAGIIGIGGGLFLGFALGAGLAAAFHVSTFEGEASYFAAAIALIVT
Ga0193747_109084423300019885SoilVQPATRKLSVSAILFGIIAGIIGIGGGLFLGFALGAALAAAFHVSTFEGGAGYFAGAIAVLVTCV
Ga0193728_130013113300019890SoilVQPATKKLSISAILFGILGGIIGIAAGLFLGFALGAALAAALHVPAREGEAA
Ga0193731_113866923300020001SoilVTAAINKISVSAILLAILGGIIGIGAGLFLGFALGAALAAAFHVSTFEG
Ga0193749_105595213300020010SoilLQAATKKLSVSAILFGILAGAVGVAVGLGFGIALGSVLAAAFHVSPMEGGAGYFAVAISLMF
Ga0193721_102589113300020018SoilVQPATKKLSVSAILFGILAGIIGIAAGLFLGFALGAALAAAFHVSTFEGE
Ga0210408_1003734923300021178SoilVQLATKKLSVSAILFGILAGIIGIAAGLFLGFALGAALAAAFHVSSFEGEAG
Ga0193719_1000300773300021344SoilMKAAINKLSVSSILFGILGGIIGIAVGLFLGFALGSVLAAALHVPSREGEAAYFTVAIALIVACIVTPVSILATLY
Ga0224452_104192113300022534Groundwater SedimentMNSDHQLQAATKKLSVSAILFGILAGFIGVGGGLILGFALGSALAAALHVSPMEG
Ga0207697_1002193053300025315Corn, Switchgrass And Miscanthus RhizosphereVQPATRKLSVSAILFGIIAGIIGIGGGLFLGFALGAALAAAFYVSTFEGEAGYFAAAIALLVTC
Ga0207645_1090913513300025907Miscanthus RhizosphereVQPATKKLSVSAILFGILAGIIGIGGGLFLGFALGAGLAAAFHVSTFE
Ga0207684_1144033923300025910Corn, Switchgrass And Miscanthus RhizosphereVKPAINKLSVSAILFGILGGILGIAAGLFLGFALGSALAAALHVPSREGEAAYFTVAIALIATCI
Ga0207700_1088313013300025928Corn, Switchgrass And Miscanthus RhizosphereVQPATKKLSISAILFGIVAGIIGIAAGLFLGFALGAALAAAFHVSTFEGEAGYFAAAI
Ga0207670_1086875613300025936Switchgrass RhizosphereVQLATKKLSVSAILFGILAGIVGIAAGLFLGFALGAALAAAFYVSTFEGEAGYFAAAIALIVT
Ga0209237_121038313300026297Grasslands SoilVKAAINTLSVSAILFGILAGIIGIGAGLFLGFALGAALAASLHVPSREGEATVTLPLP
Ga0209688_102315513300026305SoilVKPAINRLSVSAILFGILGGILGIAAGLFLGFALGAALAAALHVPSREGESGYFAVAIALIVTC
Ga0209265_116683813300026308SoilLRATIEKLSFSATLFGILGGIIGIGGGLFLGFALGAALAAAFHVSSFEGEA
Ga0209154_127369313300026317SoilVTTPVQPAKKKLPVSAILFGILAGIIGIAAGLFLGFALGAALAAAFHVSTFEGEAGLFCRRDR
Ga0209154_131044313300026317SoilVKPAINRLSVSAILFGILGGILGIAAGLFLGFALGAALAAALHVPSRE
Ga0209471_133226813300026318SoilVKPAINRLSVSAILFGILGGILGIAAGLFLGFALGAALAAALHVP
Ga0209472_103407713300026323SoilVKAAINKLSVSAILLAILGGIIGIGAGLFLGFALGAALATAFHVSTFEGE
Ga0209159_128365813300026343SoilMEAAPKKLSVSAILLGIIGGIIGLAAGLFLGFAIGAILARVMHISSFEG
Ga0209056_1073005223300026538SoilVKAAINNLSVSAILLAILGGIIGIGAGLFLGFALGAALAAAFHVSTF
Ga0209376_107651213300026540SoilVKAAINKLSVSAILLAILGGIIGIGAGLFLGFALGAALATAFHVSTF
Ga0179587_1045250733300026557Vadose Zone SoilVQLATKKLSISAILFGILAGIIGVAAGLFLGFALGAALAAAFHVSTFEGEAGYFAALIAILVTLIVTPSSIVLTLY
Ga0207509_10396723300026816SoilVQPAIKNLSVSAILLGILGGIIGIAAGLFLGFALGSALAAVFHVSTF
Ga0268266_1009910023300028379Switchgrass RhizosphereVAPVALISFVQPATTKLSVSAVLFGILGGIVGIGAGLFLGFALGAALAAVFHVSTFEG
Ga0307280_1040787923300028768SoilMKAAINNLSVSAILLAILGGIIGIGAGLFLGFALGAALAAAFHVSTFEGEAGYF
Ga0307308_1064558313300028884SoilVQPATKKLSISAILFGILGGIIGIAAGLFLGFALGAALAAALHVPAREGEAAYFTVAI
Ga0170834_10701378133300031057Forest SoilVQPATKKLSVNAILFGILAGIIGIAAGLFLGFGLGAALAAAFHVSTFEAEAGYFAAAIALLVACIVAPGLILLTLY
Ga0170824_10839184613300031231Forest SoilMQTAPKKLRVSAILLGIVGGIVGLAAELFLGFALGAILARVMHVSSFEGGA
Ga0170820_1418437213300031446Forest SoilVQPATKRLSVSAILFGIVAGVIGIAAGLFLGFALGAALAAAFHVSTFEG
Ga0170818_11203688713300031474Forest SoilVQPATKKLSVSAILFGIVAGIIGIAAGLFLGFALGAALAAAFHVSTFEG
Ga0307478_1164206713300031823Hardwood Forest SoilMQSATKKPSVNAILLGIVGGIIGIASGLFLGFALGAALAAALHVPSREGEAAYFTVAIALIVTSIVTPVSILVTLYW
Ga0310912_1082050523300031941SoilVKAAINRLSVSTVLFRILGGIIGIAVGLFLGFALGSALAATLHVPELDYQDR
Ga0310811_1016055713300033475SoilVQPATKKLSVSAILFGILAGIIGIAAGLFLGFALGAAVAAGFHVSTFEGEAGYFAAAIAL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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