Metagenome / Metatranscriptome Family F079091

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079091
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	83 residues
Representative Sequence	MFSRLLLIVALTLPMGGCLTAAEQAREIEASDDAACRDAGTKRGTPAYAKCREDMSNRRHMSQFAARIGMQNQMWSLQGH
Number of Associated Samples	77
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.22 %
% of genes near scaffold ends (potentially truncated)	34.48 %
% of genes from short scaffolds (< 2000 bps)	76.72 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.310 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (52.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.379 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 64.81% β-sheet: 0.00% Coil/Unstructured: 35.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02896	PEP-utilizers_C	8.62
PF13505	OMP_b-brl	6.03
PF03401	TctC	4.31
PF07486	Hydrolase_2	3.45
PF02518	HATPase_c	2.59
PF04055	Radical_SAM	1.72
PF00375	SDF	1.72
PF01925	TauE	0.86
PF00501	AMP-binding	0.86
PF07859	Abhydrolase_3	0.86
PF04632	FUSC	0.86
PF06042	NTP_transf_6	0.86
PF13302	Acetyltransf_3	0.86
PF02826	2-Hacid_dh_C	0.86
PF03814	KdpA	0.86
PF02978	SRP_SPB	0.86
PF02798	GST_N	0.86
PF09361	Phasin_2	0.86
PF00408	PGM_PMM_IV	0.86
PF02517	Rce1-like	0.86
PF01058	Oxidored_q6	0.86
PF07719	TPR_2	0.86
PF08974	DUF1877	0.86
PF08240	ADH_N	0.86
PF02353	CMAS	0.86
PF09206	ArabFuran-catal	0.86
PF07927	HicA_toxin	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.31
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	3.45
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.86
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.86
COG0541	Signal recognition particle GTPase	Intracellular trafficking, secretion, and vesicular transport [U]	0.86
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.86
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.86
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.86
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	0.86
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.86
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.86
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.86
COG2060	K+-transporting ATPase, KdpA subunit	Inorganic ion transport and metabolism [P]	0.86
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.86
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.86
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.86
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.86
COG3575	Uncharacterized conserved protein	Function unknown [S]	0.86
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.31 %
Unclassified	root	N/A	45.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.31 %
Unclassified	root	N/A	45.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.31 %
Unclassified	root	N/A	45.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.83 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.79 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	33.62 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	13.79 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.72 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.72 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.72 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1.72 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.86 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.86 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12.93 %
Shinella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella	1.72 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.72 %
Methylopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila	1.72 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.86 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.86 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.86 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.86 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	0.86 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
unclassified Shinella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → unclassified Shinella	1.72 %
unclassified Methylopila	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila	1.72 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.72 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.86 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.86 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.86 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	0.86 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.86 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.86 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.69 %
Methylopila sp. 73B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila → Methylopila sp. 73B	1.72 %
Shinella sp. DD12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → unclassified Shinella → Shinella sp. DD12	1.72 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.72 %
Methylobacterium sp. GXF4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. GXF4	0.86 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.86 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.86 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.86 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	0.86 %
Afipia felis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	0.86 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10012829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2781	Open in IMG/M
3300004268\|Ga0066398_10022349	All Organisms → cellular organisms → Bacteria → Proteobacteria	1076	Open in IMG/M
3300004633\|Ga0066395_10027709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2328	Open in IMG/M
3300004633\|Ga0066395_10359969	Not Available	811	Open in IMG/M
3300004633\|Ga0066395_10424338	Not Available	754	Open in IMG/M
3300004633\|Ga0066395_10439457	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300005332\|Ga0066388_100093708	All Organisms → cellular organisms → Bacteria → Proteobacteria	3438	Open in IMG/M
3300005332\|Ga0066388_100955516	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300005332\|Ga0066388_101528748	Not Available	1169	Open in IMG/M
3300005332\|Ga0066388_101643433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1133	Open in IMG/M
3300005332\|Ga0066388_102449308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	947	Open in IMG/M
3300005332\|Ga0066388_103401114	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005332\|Ga0066388_103853777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	765	Open in IMG/M
3300005332\|Ga0066388_108577297	Not Available	508	Open in IMG/M
3300005434\|Ga0070709_10003476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8459	Open in IMG/M
3300005437\|Ga0070710_10035613	Not Available	2715	Open in IMG/M
3300005713\|Ga0066905_100236753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1393	Open in IMG/M
3300005713\|Ga0066905_101879226	Not Available	554	Open in IMG/M
3300005764\|Ga0066903_100194875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3018	Open in IMG/M
3300005764\|Ga0066903_101335079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1342	Open in IMG/M
3300005764\|Ga0066903_104867149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	713	Open in IMG/M
3300005764\|Ga0066903_106065460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. GXF4	633	Open in IMG/M
3300005764\|Ga0066903_109149753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → unclassified Shinella → Shinella sp. DD12	500	Open in IMG/M
3300005937\|Ga0081455_10020455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6229	Open in IMG/M
3300006028\|Ga0070717_10601284	Not Available	998	Open in IMG/M
3300006050\|Ga0075028_100002148	Not Available	7216	Open in IMG/M
3300006173\|Ga0070716_101085520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → unclassified Shinella → Shinella sp. DD12	637	Open in IMG/M
3300006176\|Ga0070765_100029220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4263	Open in IMG/M
3300009792\|Ga0126374_11063960	Not Available	639	Open in IMG/M
3300009826\|Ga0123355_10189169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3036	Open in IMG/M
3300009826\|Ga0123355_10333023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	2031	Open in IMG/M
3300010043\|Ga0126380_10013892	All Organisms → cellular organisms → Bacteria	3697	Open in IMG/M
3300010043\|Ga0126380_11537275	Not Available	591	Open in IMG/M
3300010046\|Ga0126384_10442007	All Organisms → cellular organisms → Bacteria → Proteobacteria	1108	Open in IMG/M
3300010046\|Ga0126384_10689236	Not Available	904	Open in IMG/M
3300010049\|Ga0123356_10504117	Not Available	1367	Open in IMG/M
3300010049\|Ga0123356_11036923	Not Available	990	Open in IMG/M
3300010358\|Ga0126370_10320315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1239	Open in IMG/M
3300010358\|Ga0126370_10425203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1099	Open in IMG/M
3300010360\|Ga0126372_10151928	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300010360\|Ga0126372_10654078	Not Available	1018	Open in IMG/M
3300010360\|Ga0126372_10854586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	907	Open in IMG/M
3300010360\|Ga0126372_11445233	Not Available	722	Open in IMG/M
3300010361\|Ga0126378_10784930	All Organisms → cellular organisms → Bacteria → Proteobacteria	1062	Open in IMG/M
3300010361\|Ga0126378_11782790	Not Available	700	Open in IMG/M
3300010362\|Ga0126377_10350306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	1473	Open in IMG/M
3300010366\|Ga0126379_10173786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2039	Open in IMG/M
3300010366\|Ga0126379_13608608	Not Available	518	Open in IMG/M
3300010376\|Ga0126381_100751832	Not Available	1397	Open in IMG/M
3300010376\|Ga0126381_101366959	Not Available	1024	Open in IMG/M
3300010376\|Ga0126381_103983304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila → Methylopila sp. 73B	575	Open in IMG/M
3300010398\|Ga0126383_10381552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1440	Open in IMG/M
3300010398\|Ga0126383_12207011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	637	Open in IMG/M
3300010398\|Ga0126383_12772201	Not Available	572	Open in IMG/M
3300010863\|Ga0124850_1011798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2779	Open in IMG/M
3300011120\|Ga0150983_16096088	Not Available	555	Open in IMG/M
3300012685\|Ga0137397_10057129	All Organisms → cellular organisms → Bacteria	2809	Open in IMG/M
3300012925\|Ga0137419_10506949	Not Available	959	Open in IMG/M
3300012930\|Ga0137407_10188282	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300012944\|Ga0137410_10370534	Not Available	1148	Open in IMG/M
3300012971\|Ga0126369_11900663	Not Available	684	Open in IMG/M
3300012984\|Ga0164309_10462962	Not Available	962	Open in IMG/M
3300015052\|Ga0137411_1285389	Not Available	809	Open in IMG/M
3300015241\|Ga0137418_10008427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	9472	Open in IMG/M
3300016270\|Ga0182036_10833934	Not Available	753	Open in IMG/M
3300016270\|Ga0182036_11275622	Not Available	612	Open in IMG/M
3300016371\|Ga0182034_10588679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	937	Open in IMG/M
3300016371\|Ga0182034_10971219	Not Available	733	Open in IMG/M
3300016404\|Ga0182037_11014815	Not Available	723	Open in IMG/M
3300016422\|Ga0182039_11163140	Not Available	696	Open in IMG/M
3300021181\|Ga0210388_11054473	Not Available	695	Open in IMG/M
3300021402\|Ga0210385_10754430	Not Available	746	Open in IMG/M
3300021403\|Ga0210397_10003139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10199	Open in IMG/M
3300021474\|Ga0210390_10006240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9986	Open in IMG/M
3300021477\|Ga0210398_11328593	Not Available	564	Open in IMG/M
3300021478\|Ga0210402_10510816	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300021560\|Ga0126371_10005364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11383	Open in IMG/M
3300021560\|Ga0126371_10732499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1136	Open in IMG/M
3300021560\|Ga0126371_10806486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1085	Open in IMG/M
3300021560\|Ga0126371_10853131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1056	Open in IMG/M
3300021560\|Ga0126371_12161784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	671	Open in IMG/M
3300022724\|Ga0242665_10006281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2194	Open in IMG/M
3300022756\|Ga0222622_10222634	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300027646\|Ga0209466_1064465	Not Available	740	Open in IMG/M
3300027654\|Ga0209799_1043127	Not Available	1006	Open in IMG/M
3300027874\|Ga0209465_10633254	Not Available	528	Open in IMG/M
3300027874\|Ga0209465_10682890	Not Available	505	Open in IMG/M
3300027894\|Ga0209068_10016777	All Organisms → cellular organisms → Bacteria	3535	Open in IMG/M
3300028906\|Ga0308309_10019970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4405	Open in IMG/M
3300029636\|Ga0222749_10366879	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300030521\|Ga0307511_10421000	Not Available	540	Open in IMG/M
3300031543\|Ga0318516_10190249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1184	Open in IMG/M
3300031543\|Ga0318516_10257151	Not Available	1010	Open in IMG/M
3300031544\|Ga0318534_10028193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3044	Open in IMG/M
3300031549\|Ga0318571_10273115	Not Available	628	Open in IMG/M
3300031561\|Ga0318528_10330451	Not Available	818	Open in IMG/M
3300031561\|Ga0318528_10503763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	650	Open in IMG/M
3300031573\|Ga0310915_11240548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila → Methylopila sp. 73B	515	Open in IMG/M
3300031719\|Ga0306917_10035940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia felis	3232	Open in IMG/M
3300031764\|Ga0318535_10032077	Not Available	2111	Open in IMG/M
3300031765\|Ga0318554_10664633	Not Available	585	Open in IMG/M
3300031771\|Ga0318546_10713607	Not Available	705	Open in IMG/M
3300031782\|Ga0318552_10149767	Not Available	1172	Open in IMG/M
3300031820\|Ga0307473_11070590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	593	Open in IMG/M
3300031821\|Ga0318567_10696367	Not Available	576	Open in IMG/M
3300031823\|Ga0307478_10163242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1775	Open in IMG/M
3300031835\|Ga0318517_10294033	Not Available	734	Open in IMG/M
3300031890\|Ga0306925_10030591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5485	Open in IMG/M
3300031890\|Ga0306925_11649986	Not Available	621	Open in IMG/M
3300031942\|Ga0310916_10849105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	767	Open in IMG/M
3300031946\|Ga0310910_10692659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	806	Open in IMG/M
3300032044\|Ga0318558_10135234	Not Available	1178	Open in IMG/M
3300032067\|Ga0318524_10064736	Not Available	1766	Open in IMG/M
3300032090\|Ga0318518_10406264	Not Available	698	Open in IMG/M
3300032261\|Ga0306920_102388321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	730	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.83%
Host-Associated	Host-Associated	5.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.24%
Arthropoda	Host-Associated → Arthropoda	3.45%
Aquatic	Environmental → Aquatic	2.59%
Plants	Host-Associated → Plants	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.24%
Digestive System	Host-Associated → Arthropoda → Digestive System	3.45%
Sediment	Environmental → Aquatic → Sediment	2.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.79%
Loam	Environmental → Terrestrial → Soil → Loam	28.45%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	21.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	3.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.86%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100128293	3300003505	Forest Soil	MLGVASMSRARRGETAGSGTMFSRLLFVVALTLPMSGCQTAAERAEEIAAHDDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH*
Ga0066398_100223492	3300004268	Tropical Forest Soil	MGGCLTAAEQAREIEASDDAACRDAGTKPGTPAYAKCREDVSNRRHMSQFAARIGMQNQMWSLHGH*
Ga0066395_100277092	3300004633	Tropical Forest Soil	MCSRLLLIVALTLPMGGCLTAAEQAREIEASDDAACRDAGTKPGTPAYAKCREDVSNRRHMSQFAARIGMQNQMWSLHGH*
Ga0066395_103599692	3300004633	Tropical Forest Soil	MFSRLLLIVALTLPMGGCLTAAEQAREIEASDDAACREAGTKPRTPAYAKCREDISNQRRMSQFAARIGMQNQIWSLQGH*
Ga0066395_104243381	3300004633	Tropical Forest Soil	MQIGFSRMLLIVAAALPLGACMTAAEQARQIEVSDDAACRDAGTKRGTPAYAKCREDMSTQRRMSQMAARIGMQNQIWSLQRH*
Ga0066395_104394571	3300004633	Tropical Forest Soil	MYSRLLLILALTLPMGGCLTAAEQAREIEASDDAACRNAGTKPGTPPYAKCREDMSNRRRMSQFAARIGMQNQMWSLQGH*
Ga0066388_1000937084	3300005332	Tropical Forest Soil	MFSRLLLIFALMLPMTGCMTAAEQAREIEASDDAACRDAGMKRGTPAYAKCREDMSTRRRMSQMAARIGMQNQIWSLQGH*
Ga0066388_1009555162	3300005332	Tropical Forest Soil	MQMRFSRMLLIVAAALPLGACMTAAEQARQIEASDDAACRDAGTKRGTPAYAKCREDMSNRRHMSEVAARIGMQNQIWSLQRR*
Ga0066388_1015287483	3300005332	Tropical Forest Soil	MKIHFLRLPLIVAAALPLGACMTAAEQARQIEASDDAACRDAGTKRETPAYAKCREDMSNRRHMSEVAARIGMQNQIWSLQRH*
Ga0066388_1016434331	3300005332	Tropical Forest Soil	MFSRLLLIVALTVPMGGCQTAAEQAREIEASDDAACRDAGTKRGTPAYAKCREDVSNRRHMSQFAARIGMQNQMWSLQGH*
Ga0066388_1024493081	3300005332	Tropical Forest Soil	MVAVTLPLGACLTAEEQAREIAASDDAACRDAGMKPRTPAYDKCREDMSNRRHMSQFAARIGMQNQIWSQQEMTRNQMMMGH*
Ga0066388_1034011141	3300005332	Tropical Forest Soil	MGGCLTAAEQAREIEASDDAACRDAGTKPGTSAYAKCREDMSNRRRMSQFAARIGMQNQMWSLHGH*
Ga0066388_1038537771	3300005332	Tropical Forest Soil	MFSRLLLIVALTLPMGGCLTAAEQAREIEASDDAACRDAGTKRGTPAYAKCREDMSNRRHMSQFAARIGMQNQVWSLQGH*
Ga0066388_1085772972	3300005332	Tropical Forest Soil	MFSRLFLIVALTLPMAGCLTAAEQAREIEASDDAACRHAGTRPGTPAYAKCREDLSNQWRMSQFAARIGMQNQTWS
Ga0070709_100034765	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MFSRLLFVVALTLPMSGCQTAAERAEEIAAHDDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH*
Ga0070710_100356131	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSRARRGETAGSGTMFSRLLFVVALTLPMSGCQTAAERAEEIAAHDDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH*
Ga0066905_1002367532	3300005713	Tropical Forest Soil	MKIHLLRVLLVVAAALSLGGCFVTAEQIAADDDAACRSAGAKRGTPAYAKCREDISNRRRMSEMAARIGMQNQIWSLQRH*
Ga0066905_1018792262	3300005713	Tropical Forest Soil	MFSRLLLLVALTLPMGGCLTAAEQAREIEASDDAACREAGTKPRTPAYAKCREDMSNQRRMSQFAARIGMQNQIWSLQGH*
Ga0066903_1001948752	3300005764	Tropical Forest Soil	MFPRLLLIVALTLPLSACLTAAEQPQEIEASDNAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQTWSLQGR*
Ga0066903_1013350792	3300005764	Tropical Forest Soil	LLIVALTLPMGGCLTAAEQAREIEASDDAACRDAGTKPGTPAYAKCREDVSNRRHMSQFAARIGMQNQMWSLHGH*
Ga0066903_1048671492	3300005764	Tropical Forest Soil	METHFSRLLLIVGLTLPIGGCLTAAEQAREIAASDDAACRDAGTKPGTLAYAKCREDMSNRRQMSQMAARIGMQNQIWSQQEMMTHQMMMGH*
Ga0066903_1060654601	3300005764	Tropical Forest Soil	MFSRLLLIVALTLPVGACVTTQEIEAHDDAACRNTGTKPGTPEYAKCREDMSNQRQMAARIGMQNQM
Ga0066903_1091497531	3300005764	Tropical Forest Soil	SACLTAAEQEREIAARDDARCREAGTKPGTPAYAKCLEEMSNRRHMSEMAMRIGMQNQIWSQQEMTRNQMMMGR*
Ga0081455_100204555	3300005937	Tabebuia Heterophylla Rhizosphere	MQIHFSRMLLIVATALPLGACMTAAEQARQIEVSDDAACRDAGTKRGTPAYAKCREDMSNQRHMSQTAARIGMQNQIWSLQRH*
Ga0070717_106012842	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLGVASMSRARRGETAGSGTMFSRLLFIVALTLPMSGCQTAAEHAEEIAAHDDAACRDAGTKPETPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH*
Ga0075028_1000021486	3300006050	Watersheds	MEMHFSRLLLIVAATLPLGACMTAAEQSREIAASDDAACRNAGTKPGTPAYAKCRETMSNQRAMGRIAEDQAMQHSIADLGIP*
Ga0070716_1010855201	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSRARRGETAGSGTMFSRLLFNVALTLPMSGCQTAAEHAEEIAAHDDAACRDAGTKPETPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH*
Ga0070765_1000292203	3300006176	Soil	MLSRLLLIVAVTLPMGACLTAAEQAQEIAASDDAACRDAGTKPGTPAYAKCREDMSNRRQMSQTAARIGMQNQIWSLQGH*
Ga0126374_110639601	3300009792	Tropical Forest Soil	QPRMAARQQGERMFSRLLLMVAVTLPLGACLTAEEQAREIAASDDAACRDAGMKPRTPAYDKCREDMSNRRHMSQFAARIGMQNQIWSQQEMTRNQMMMGH*
Ga0123355_101891691	3300009826	Termite Gut	MKTLLLRLVLTVAAALPLAACLTTADRVEQAREIAAADDAACRNAGTKPGTPAYAKCREDISNRRAMSDMAARIGMQNDIWAMQEMNRNMMMSRP*
Ga0123355_103330232	3300009826	Termite Gut	MFSRLLLIVALTLPIGACVTAADQAREIEASDDAACRNAGTRPGSPAYAKCREDMSNRRQMSQMAARIGMQNDMWAMQQMNRQQMFRPPM*
Ga0126380_100138926	3300010043	Tropical Forest Soil	MQIGFSRMLLIVAAALPLGACMTAAEQARQIEVSDDAACRDAGTKRGTPAYAKCREDMSTQRRMSQMAARIGMQNQIWILQRH*
Ga0126380_115372751	3300010043	Tropical Forest Soil	MFSRLLLIVALTLPMCACMTAAEQAQQIESSDDAACRNTGTKPGTAAYAQCKEDMSNRRRMSQFAARIGMQNQMWSLQGH*
Ga0126384_104420071	3300010046	Tropical Forest Soil	MVSRLLLIVALTLPLSGCLTAAEQAREIEASDDAACRDAGMKRGTPAYAKCREDMSTRRRMSQMAARIGMQNQIWSLQGH*
Ga0126384_106892362	3300010046	Tropical Forest Soil	LLLIVALTVPMGGCQTAAEQAREIEASDDAACRDAGTKRGTPAYAKCREDMANRRHMSEVAARISMQNQIWSLQRH*
Ga0126382_109835742	3300010047	Tropical Forest Soil	MKIHLLRVLLVVAAALSLGGCFVTAEQIAANDDAACRSAGAKPGTPAYAKCREDISNRRRMSEMAARIGMPNQMWSLQRH*
Ga0123356_105041172	3300010049	Termite Gut	LIVALTLPIGACVTAADQAREIEASDDAACRNAGTRPGSPAYAKCREDMSNRRQMSQMAARIGMQNDMWAMQQMNRQQMFRPPM*
Ga0123356_110369231	3300010049	Termite Gut	AAEQAREIEGRDDAACRNAGTKPGTPAYAKCRQDMSNRRQMSEMAARIGTQNDIWAMQQMNRQQMFRPPM*
Ga0126370_103203152	3300010358	Tropical Forest Soil	VGKARHILALTLPIGGCLTAAQQAREIEASDDAACRDAGTKPGTPPYAKCREDMSNRRRMSQFAARIGMQNQMWSLQGH*
Ga0126370_104252031	3300010358	Tropical Forest Soil	MFSRLLLMVAVTLPLGACLTAEEQAREIAASDDAACRDAGMKPRTPAYDKCREDMSNRRHMSQFAARIGMQNQIWSQQEMTRNQMMMGH*
Ga0126372_101519281	3300010360	Tropical Forest Soil	MFSRLLLIVALTLPMGGCLTAAEQAREIEASDDAACRDAGTKRGTPAYAKCREDMSNRRHMSQFAARIGMQNQMWSLQGH*
Ga0126372_106540783	3300010360	Tropical Forest Soil	LPLGACMTAAEQARQIEASDDAACRDAGTKRGTPAYAKCREDMSNRRHMSEVAARIGMQNQIWSLQRH*
Ga0126372_108545862	3300010360	Tropical Forest Soil	HFSRLLLIVAAALPLGACLTAAETQEQIAASDDAACRDAGTKPGTPAYAKCREDVSNRRHMSQFAARIGMQNQMWSLHGH*
Ga0126372_114452331	3300010360	Tropical Forest Soil	VASISRAWRRDSRGERMFSRLLLMVAVTLPLGACLTAEEQAREIAASDDAACRDAGMKPRTPAYDKCREDMSNRRHMSQFAARIGMQNQIWSQQEMTRNQMMMGH*
Ga0126378_107849302	3300010361	Tropical Forest Soil	MEMRLSRLLLILAATLPLGACMTAAEQAREIAASDDAACRNAGTKAGTPAYAKCRETMSNQRAVGRIAEDQAMQRQMWEMMRPPM*
Ga0126378_117827902	3300010361	Tropical Forest Soil	MHFSRLLLIVAATLPLSACMTAAEQARETAASDDAACRNAGTKPGTPAYAKCRETMSNQRAMGRIAEDQAMQRQMHEMLTPPMH*
Ga0126377_103503063	3300010362	Tropical Forest Soil	MFSRLLLIVALTLPMGGCLTAAEQAREIEASDDAACREAGAKPRTPAYAKCREDISNQRRMSQFAARIGMQNQIWSLQGH*
Ga0126379_101737863	3300010366	Tropical Forest Soil	MFSRLLLMVAVTLPLGACLTAEEQAREIAASDDAACRDAGVKPRTPAYDKCREDMSNRRHMSQFAARIGMQNQIWSQQEMTRNQMMMGH*
Ga0126379_136086082	3300010366	Tropical Forest Soil	AKMFPRLLLIVALTLPLSACLTAAEQPQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQTWSLQGR*
Ga0126381_1007518323	3300010376	Tropical Forest Soil	MFSRLLLIVAVTLPMGACLTAEEQAREIAASDDAACRDAGMKPGTPAYAKCREDMSNRRHMSEMAMRIGMQNQIWSQQEMTRNQMMMGH*
Ga0126381_1013669591	3300010376	Tropical Forest Soil	MFSRFLLIIAVTLPLSACLTAAEQEREIAARDDARCREVGTKPGTPAYAKCLEDMSNRRHMSEMAMRIGMQNQIWSQ
Ga0126381_1039833041	3300010376	Tropical Forest Soil	MQNFSRLLVIVAAALPLGACMTAAEQARAIAANDDAACRSSGTKPGTPAYAKCRDTMSNQRAMAQFVEDQAMQRQMREMMRPPM*
Ga0126383_103815522	3300010398	Tropical Forest Soil	VFTALLIVALTLPMGGCLTAAEQAREIEASDDAACRDAGTKPGTPAYAKCREDVSNRRHMSQFAARIGMQNQMWSLHGH*
Ga0126383_122070112	3300010398	Tropical Forest Soil	LTLPMGGCLTAAEQAREIEASDDAACRDAGTKPGTPPYAKCREDMSNRRRMSQFAARIGMQNQMWSLQGH*
Ga0126383_127722011	3300010398	Tropical Forest Soil	MFSRLLLMVAVTLPLGACLTAEEQAREIAASDDAACRDAGVKPRTPAYDKCREDMSNRRHMSQFAARIGMQNQIWSQQEMTRNQMMMG
Ga0124850_10117981	3300010863	Tropical Forest Soil	MVVGRGFNQPRMAARQQGERMFSRLLLMVAVTLPLGACLTAEEQAREIAASDDAACRDAGMKPRTPAYDKCREDMSNRRHMSQFAARIGMQNQIWSQQEMTRNQMMMGH*
Ga0150983_160960881	3300011120	Forest Soil	MLGVASMSRARRGETAGSGTMFSRLLFVVALTLPMSGCQTAAERAEEIAAHEDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH
Ga0137397_100571295	3300012685	Vadose Zone Soil	MLLIVAAALPLCARMTAAEQARQIEVSDDAACRDAGTKRGTPAYAKCREDMSNRRHMSEVTARIGMQNQIWSLQRH*
Ga0137419_105069492	3300012925	Vadose Zone Soil	MRFSRLLLIVALTLPVGACLTAEEQARETAASDDAACRDTGTKPGTPAYAKCREDMSNRRNMSQMAARIGMQNQMWSLQGR*
Ga0137407_101882822	3300012930	Vadose Zone Soil	MLLIVAAALPLCACMTAAEQARQIEVSDDAACRDAGTKRGTPAYAKCREDMSNRRHMSEVAARIGMQNQTWSLQRH*
Ga0137410_103705342	3300012944	Vadose Zone Soil	MFSRLLLIVALTLPMGACLTAVEQAREIEAGDDAACRDAGTKPGTPAYAKCREDMSNRRNMSQMAARIGMQNQMWSLQGR*
Ga0126369_119006631	3300012971	Tropical Forest Soil	MFSRLLLIIAVTLPLSACLTAAEQEREIAARDDARCREAGTKPGTPAYAKCLEEMSNRRHMSEMAMRIGMQNQIWSQQEMTRNQMMMGR*
Ga0164309_104629621	3300012984	Soil	MLGVASMSRARRGETAGSGTMFSRLLFVVALTLPMSGCQTAAERAEEIAAHDDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQ
Ga0137411_12853891	3300015052	Vadose Zone Soil	MLLIVAAALPLCARMTAAEQARQIEVSDDAACRDAGTKRGTPAYAKCREDMSNRRHMSEVTARIGMQNQIWSLQRH
Ga0137418_100084272	3300015241	Vadose Zone Soil	MFLRLLLIVALTLPMGACLTAVEQAREIEAGDDAACRDAGTKPGTPAYAKCREDMSNRRNMSQMAARIGMQNQMWSLQGR*
Ga0182036_108339341	3300016270	Soil	METHFSRLLLIVGLTLPIGGCLTAAEQAREIAASDDAACRDAGTKPGTPAYTKCREDMSNRRQMSQMAARIGMQNQIWSQQEMMTHQMMMGH
Ga0182036_112756222	3300016270	Soil	MEMRLSRLLLILAATLPLGACTTAAEQAREIAASDDAACRNAGTKPGTPAYAKCRETMSNQRAMGRIAEDQAMQRQMWEMMRPPMH
Ga0182034_105886792	3300016371	Soil	MRLSRLLLILAATLPLGACMTAAEQEREIAASDDAACRNAGTKAGTPAYAKCRVTMSNQRAMGRIAEDQAMQRQMWEMMRPPMH
Ga0182034_109712191	3300016371	Soil	METHFSRLLLIVGLTLPIGGCLTAAEQAREIAASDDAACRDAGTKPGTPAYAKCREDMSNRRQMSQMAARIGMQNQIWSQQEMMTHQMMMGH
Ga0182037_110148152	3300016404	Soil	MRLSRLLLILAATLPLGACMTAAEQARKIAASDDAACRNAGTKAGTPAYAKCRETMSNQRAMARIVEDQAMQRQMWEMMRPPMH
Ga0182039_111631401	3300016422	Soil	MEMRLSRLLLILAATLPLGACMTAAEQAREIAASDDAACRNAGTKAGTPAYAKCRETMSNQRAMGRIAEDQAMQRQMWEMMRPPMH
Ga0210388_110544731	3300021181	Soil	FQDGGHRPSCWRHRMLGVASMSRARRGETAGSGTMFSRLLFVVALTLPMSGCQTAAERAEEIAAHDDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH
Ga0210385_107544301	3300021402	Soil	AGSGTMFSRLLFVVALTLPMSGCQTAAERAEEIAAHDDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH
Ga0210397_100031394	3300021403	Soil	MSGCQTAAERAEEIAAHDDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH
Ga0210390_100062401	3300021474	Soil	PMSGCQTAAERAEEIAAHDDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH
Ga0210398_113285932	3300021477	Soil	MLGVASMSRARRGETAGSGTMFSRLLFVVALTLPMSGCQTAAERAEEIAAHDDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH
Ga0210402_105108162	3300021478	Soil	MLSRLLLIVAVTLPMGACLTAAEQAQEIAASDDAACRDAGTKPGTPTYAKCREDMSNRRQMSQTAARIGMQNQIWSLQGH
Ga0126371_100053649	3300021560	Tropical Forest Soil	MGGCLTAAEQAREIEASDDAACRDAGTKPGTPAYAKCREDVSNRRHMSQFAARIGMQNQMWSLHGH
Ga0126371_107324991	3300021560	Tropical Forest Soil	MHFSRLLLIVAATLPLSACMTAAEQARETAASDDAACRNAGTKPGTPAYAKCRETMSNQRAMGRIAEDQAMQRQMHEMLTPPMH
Ga0126371_108064862	3300021560	Tropical Forest Soil	MRSRLLLILALTLPIGGCLTAAEQAREIEASDDAACRDAGTKPGTPPYAKCREDMSNRRRMSQFAARIGMQNQMWSLQGH
Ga0126371_108531311	3300021560	Tropical Forest Soil	MVVGRGFNQPRMAARQQGERMFSRLLLMVAVTLPLGACLTAEEQAREIAASDDAACRDAGMKPRTPAYDKCREDMSNRRHMSQFAARIGMQNQIWSQQEMTRNQMMMGH
Ga0126371_121617841	3300021560	Tropical Forest Soil	MRLSRLLLILAATLPLGACMTAAEQAREIAASDDAACRNAGTKAGTPAYAKCRETMLNQRAMARIVEDQAMQRQMHEMMRPPM
Ga0242665_100062814	3300022724	Soil	TAGSGTMFSRLLFVVALTLPMSGCQTAAERAEEIAAHDDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH
Ga0222622_102226345	3300022756	Groundwater Sediment	MHFSRILLIVAAALPLGACMTAAEQARQIEASDDAACRDAGTKRGTPAYAKCLEDMSNQRRMSQMAARIGMQNQTWSLQRR
Ga0209466_10644652	3300027646	Tropical Forest Soil	MQIHFSRMLLIVAAVLPLGACMTAAEQARQIEASDDAACRDAGTKRGTPAYAKCREDMSNRRHMSEVAARIGMQNQIWSLQRH
Ga0209799_10431271	3300027654	Tropical Forest Soil	MCSRLLLIVALTLPMGGCLTAAEQAREIEASDDAACRDAGTKPGTPAYAKCREDVSNRRHMSQFAARIGMQNQMWSLHGH
Ga0209465_106332541	3300027874	Tropical Forest Soil	RMYSRLLLILALTLPMGGCLTAAEQAREIEASDDAACRNAGTKPGTPPYAKCREDMSNRRRMSQFAARIGMQNQMWSLQGH
Ga0209465_106828901	3300027874	Tropical Forest Soil	MFSRLLLIVALTLPMGGCLTAAEQAREIEASDDAACREAGTKPRTPAYAKCREDISNQRRMSQFAARIGMQNQKWS
Ga0209068_100167778	3300027894	Watersheds	MEMHFSRLLLIVAATLPLGACMTAAEQSREIAASDDAACRNAGTKPGTPAYAKCRETMSNQRAMGRIAEDQAMQHSIADLGIP
Ga0308309_100199705	3300028906	Soil	MLSRLLLIVAVTLPMGACLTAAEQAQEIAASDDAACRDAGTKPGTPAYAKCREDMSNRRQMSQTAARIGMQNQIWSLQGH
Ga0222749_103668792	3300029636	Soil	MLSRLLLIVAVTLPMGACLTAAEQAQEIAANDDAACRDAGTKPGTPAYAKCREDTSNRRQMSQTAARIGMQNQIWSLQGH
Ga0307511_104210001	3300030521	Ectomycorrhiza	RMLLIVAAALPLGACMTAAEQARQIEASDDASCRDAGTKRGTPAYAKCKEDMSNRRHMSEVAARIGMQNQIWSLQRH
Ga0318516_101902492	3300031543	Soil	MRLSRLLLILAATLPLGACMTAAEQAREIAASDDAACRNAGTKAGTPAYAKCRETMSNQRAMGRIAEDQAMQRQMWEMMRPPMH
Ga0318516_102571512	3300031543	Soil	MFSRLLLIVALTLPIGGCLTAAEQARQIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQIWSLQGR
Ga0318534_100281932	3300031544	Soil	MFPRLLLIVALTLPLSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQIWSLQGR
Ga0318571_102731151	3300031549	Soil	METLLSRLLLILAATLPLGACTTAAEQAREIAASDDAACRNAGTKPGTPAYAKCRATMSNQRAMGRIAEDQAMQRQMWEMMRPPMH
Ga0318528_103304512	3300031561	Soil	VSRGGKMFPRLLLIVALTLPLSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQIWSLQGR
Ga0318528_105037632	3300031561	Soil	MEMLLSRLLLILAATLPLGACTTAAEQAREIAASDDAACRNAGTKPGTPAYAKCRATMSNQRAMGRIAEDQAMQRQMWEMMRPPMH
Ga0310915_112405481	3300031573	Soil	MEMRLSWLLLILAATLPLGACMTAAEQAREIAASDDAACRNAGTKAGTPAYAKCRETMSNQRAMGRIAEDQAMQRQMWEMMRPPMH
Ga0306917_100359402	3300031719	Soil	LLLIVALTLPLSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQIWSLQGR
Ga0318535_100320771	3300031764	Soil	MFPRLLLIVALTLPLSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIG
Ga0318554_106646331	3300031765	Soil	LPLSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQIWSLQGR
Ga0318546_107136071	3300031771	Soil	LSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQIWSLQGR
Ga0318552_101497672	3300031782	Soil	GKMFPRLLLIVALTLPLSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQIWSLQGR
Ga0307473_110705901	3300031820	Hardwood Forest Soil	MRTASNEWLPDRRRACEEIAAHDDAACRDAGTKPETPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRKQMMMGH
Ga0318567_106963672	3300031821	Soil	RVKRRVSRGGKMFPRLLLIVALTLPLSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQIWSLQGR
Ga0307478_101632424	3300031823	Hardwood Forest Soil	FVVALTLPMSGCQTAAERAEEIAAHDDAACRDAGTKPGTPAYAKCREDMSNRRQMSEMASRIGMQNQIWSQQEMTRHQMMMGH
Ga0318517_102940331	3300031835	Soil	MFSRLLLIIAVTLPLSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQIWSLQGR
Ga0306925_100305913	3300031890	Soil	MFPRLLLIVALTLPLSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQVWSLQGR
Ga0306925_116499861	3300031890	Soil	MGTHFSRLLLIVGLTLPIGGCLTAAEQAREIAASDDAACRDAGTKPGTPAYAKCREDMSNRRQMSQMAARIGMQNQIWSQQEMMTHQMMMGH
Ga0310916_108491051	3300031942	Soil	MRLSRLLLILAATLPLGACMTAAEQAREIAASDDAACRNAGTKAGTPAYAKCRETMSNQRAMARIVEDQAMQRQMWEMMRPPMH
Ga0310910_106926592	3300031946	Soil	MRLSRLLLILAATLPLGACMTAAEQAREIAASDDAACRNAGTNAGTPAYAKCRETMSNQRAMGRIAEDQAMQRQMWE
Ga0318558_101352341	3300032044	Soil	MFPRLLLIVALTLPLSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQIW
Ga0318524_100647363	3300032067	Soil	MFPRLLLIVALTLPLSACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQVW
Ga0318518_104062641	3300032090	Soil	SACLTAAEQAQEIEASDDAACRDAGTKPGTPAYAKCREDMSNRRGMSQMAARIGMQNQIWSLQGR
Ga0306920_1023883211	3300032261	Soil	MEMRLSRLLLILAATLPLGACMTAAEQAREIAASDDAACRNAGTKAGTPAYAKCRETMSNQRAMARIVEDQAMQRQMWEMMRPPMH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079091

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences