Metagenome / Metatranscriptome Family F079115

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079115
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	45 residues
Representative Sequence	AAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV
Number of Associated Samples	99
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.03 %
% of genes near scaffold ends (potentially truncated)	93.10 %
% of genes from short scaffolds (< 2000 bps)	92.24 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (14.655 % of family members)
Environment Ontology (ENVO)	Unclassified (29.310 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.034 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.13% β-sheet: 0.00% Coil/Unstructured: 78.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF08734	GYD	41.38
PF04392	ABC_sub_bind	3.45
PF00903	Glyoxalase	3.45
PF01569	PAP2	2.59
PF00355	Rieske	2.59
PF00582	Usp	1.72
PF13189	Cytidylate_kin2	1.72
PF00072	Response_reg	0.86
PF08445	FR47	0.86
PF05598	DUF772	0.86
PF07681	DoxX	0.86
PF04191	PEMT	0.86
PF02586	SRAP	0.86
PF01135	PCMT	0.86
PF14347	DUF4399	0.86
PF00753	Lactamase_B	0.86
PF02738	MoCoBD_1	0.86
PF13924	Lipocalin_5	0.86
PF13185	GAF_2	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	41.38
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.45
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.86
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.86
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.86
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.86
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.86
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.69 %
Unclassified	root	N/A	4.31 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.52 %
Unclassified	root	N/A	4.31 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	2.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.59 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.86 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	31.03 %
Unclassified	root	N/A	4.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.59 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	31.03 %
Unclassified	root	N/A	4.31 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	2.59 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.59 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	31.03 %
Unclassified	root	N/A	4.31 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	2.59 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.86 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	31.03 %
Unclassified	root	N/A	4.31 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	2.59 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.86 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002223\|C687J26845_10262661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300004051\|Ga0055492_10109563	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300004145\|Ga0055489_10181307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300004463\|Ga0063356_101632481	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300004633\|Ga0066395_10077884	All Organisms → cellular organisms → Bacteria → Proteobacteria	1545	Open in IMG/M
3300004633\|Ga0066395_10831489	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005186\|Ga0066676_10756505	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005205\|Ga0068999_10093037	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300005344\|Ga0070661_101217447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300005355\|Ga0070671_101364875	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300005356\|Ga0070674_100145471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1783	Open in IMG/M
3300005554\|Ga0066661_10262979	Not Available	1067	Open in IMG/M
3300005719\|Ga0068861_102390424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300005764\|Ga0066903_100524421	All Organisms → cellular organisms → Bacteria → Proteobacteria	2019	Open in IMG/M
3300005843\|Ga0068860_101791699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	636	Open in IMG/M
3300006034\|Ga0066656_10199545	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300006173\|Ga0070716_100483034	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300006755\|Ga0079222_11728339	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300006853\|Ga0075420_100732058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	852	Open in IMG/M
3300006871\|Ga0075434_102082294	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300006903\|Ga0075426_10960188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	645	Open in IMG/M
3300009012\|Ga0066710_102052661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	844	Open in IMG/M
3300009089\|Ga0099828_10709716	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300009094\|Ga0111539_10202895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2312	Open in IMG/M
3300009100\|Ga0075418_12902172	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300009157\|Ga0105092_10062583	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300009162\|Ga0075423_10609985	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1150	Open in IMG/M
3300009167\|Ga0113563_10864408	All Organisms → cellular organisms → Bacteria → Proteobacteria	1030	Open in IMG/M
3300009609\|Ga0105347_1104142	Not Available	1073	Open in IMG/M
3300009792\|Ga0126374_10102999	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300009792\|Ga0126374_10125666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	1509	Open in IMG/M
3300009792\|Ga0126374_10372160	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	988	Open in IMG/M
3300009792\|Ga0126374_11789707	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	513	Open in IMG/M
3300009810\|Ga0105088_1025029	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300009816\|Ga0105076_1048905	Not Available	765	Open in IMG/M
3300009817\|Ga0105062_1040171	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	837	Open in IMG/M
3300010047\|Ga0126382_10256438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	1285	Open in IMG/M
3300010047\|Ga0126382_10811490	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300010047\|Ga0126382_12342601	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300010048\|Ga0126373_11164075	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300010048\|Ga0126373_12297850	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	600	Open in IMG/M
3300010048\|Ga0126373_12587747	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010304\|Ga0134088_10088920	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300010304\|Ga0134088_10144362	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300010304\|Ga0134088_10702537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300010335\|Ga0134063_10154712	Not Available	1065	Open in IMG/M
3300010359\|Ga0126376_10349561	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300010359\|Ga0126376_10933487	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300010362\|Ga0126377_10063176	All Organisms → cellular organisms → Bacteria → Proteobacteria	3267	Open in IMG/M
3300010376\|Ga0126381_103835150	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010413\|Ga0136851_10417108	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300011269\|Ga0137392_10298106	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1332	Open in IMG/M
3300011405\|Ga0137340_1047819	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	814	Open in IMG/M
3300011430\|Ga0137423_1256331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300012038\|Ga0137431_1020107	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300012202\|Ga0137363_10612138	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300012202\|Ga0137363_10725386	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300012204\|Ga0137374_10267429	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300012205\|Ga0137362_10139776	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300012210\|Ga0137378_10275632	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300012351\|Ga0137386_10176872	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300012360\|Ga0137375_10625319	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	892	Open in IMG/M
3300012360\|Ga0137375_11153993	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	597	Open in IMG/M
3300012685\|Ga0137397_10720026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300012929\|Ga0137404_10399752	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1211	Open in IMG/M
3300012930\|Ga0137407_11244970	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300012948\|Ga0126375_11848801	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300012971\|Ga0126369_10339880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20	1519	Open in IMG/M
3300013306\|Ga0163162_13000495	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300014300\|Ga0075321_1138992	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300015371\|Ga0132258_10249611	All Organisms → cellular organisms → Bacteria	4337	Open in IMG/M
3300015371\|Ga0132258_11154548	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1958	Open in IMG/M
3300015373\|Ga0132257_100407558	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300016422\|Ga0182039_10310598	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1310	Open in IMG/M
3300017966\|Ga0187776_11128487	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300018027\|Ga0184605_10294782	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	735	Open in IMG/M
3300018053\|Ga0184626_10360845	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300018054\|Ga0184621_10121932	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300018073\|Ga0184624_10366128	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300018081\|Ga0184625_10537045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	584	Open in IMG/M
3300018083\|Ga0184628_10422753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	695	Open in IMG/M
3300018422\|Ga0190265_12751965	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300019208\|Ga0180110_1019151	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300019249\|Ga0184648_1338338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300019259\|Ga0184646_1278742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300019361\|Ga0173482_10025533	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300021560\|Ga0126371_11921948	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300022195\|Ga0222625_1417727	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300024056\|Ga0124853_1211109	All Organisms → cellular organisms → Bacteria → Proteobacteria	2311	Open in IMG/M
3300024516\|Ga0209980_10048151	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300024516\|Ga0209980_10107853	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300025319\|Ga0209520_10599023	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	634	Open in IMG/M
3300025324\|Ga0209640_11194939	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300025931\|Ga0207644_10650528	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300025945\|Ga0207679_10276789	All Organisms → cellular organisms → Bacteria	1437	Open in IMG/M
3300025971\|Ga0210102_1079943	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300026078\|Ga0207702_10226576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1744	Open in IMG/M
3300026548\|Ga0209161_10250953	Not Available	920	Open in IMG/M
3300027032\|Ga0209877_1018083	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300027552\|Ga0209982_1092027	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300027722\|Ga0209819_10029989	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300027909\|Ga0209382_10995765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	874	Open in IMG/M
3300027952\|Ga0209889_1032857	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300027957\|Ga0209857_1062686	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300027957\|Ga0209857_1089885	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300028597\|Ga0247820_11167946	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300030620\|Ga0302046_10878775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	718	Open in IMG/M
3300031058\|Ga0308189_10556594	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300031716\|Ga0310813_11791904	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031941\|Ga0310912_10762006	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	749	Open in IMG/M
3300031965\|Ga0326597_11071974	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	807	Open in IMG/M
3300032012\|Ga0310902_11314779	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300033412\|Ga0310810_10212362	All Organisms → cellular organisms → Bacteria	2172	Open in IMG/M
3300033412\|Ga0310810_10331621	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300034176\|Ga0364931_0169164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300034177\|Ga0364932_0047910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.90%
Host-Associated	Host-Associated	18.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.34%
Aquatic	Environmental → Aquatic	21.55%
Plants	Host-Associated → Plants	18.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.34%
Sediment	Environmental → Aquatic → Sediment	9.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.76%
Freshwater	Environmental → Aquatic → Freshwater	6.90%
Marine	Environmental → Aquatic → Marine	5.17%
Floodplain	Environmental → Terrestrial → Floodplain	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.48%
Sand	Environmental → Terrestrial → Soil → Sand	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.03%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.17%
Loam	Environmental → Terrestrial → Soil → Loam	5.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.31%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.72%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.48%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.03%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.31%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.72%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.72%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.86%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.90%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.45%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.45%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.72%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.72%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.72%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.86%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002223	Soil microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_1.2	Environmental	Open in IMG/M
3300004051	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014300	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019208	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300024516	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR02 metaG (SPAdes)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027032	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes)	Environmental	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J26845_102626612	3300002223	Soil	IVVEADSPEPIHKFMASIQSLGNVKMKFVRAFSIEEMRKMV*
Ga0055492_101095632	3300004051	Natural And Restored Wetlands	YTPTGPHDAAIFIEAEGPEPINRFMANTQSMGNTKMKFVRAFSIDEMRKML*
Ga0055489_101813072	3300004145	Natural And Restored Wetlands	PGGPNDAAMIIEAEGPEPIHKLMASIQSLGNVKLKFVRTFSIEEMRKMV*
Ga0063356_1016324813	3300004463	Arabidopsis Thaliana Rhizosphere	MIAAIIIEAEGPETINKFMSSVQSLGNVKMKFIRAFSIEEMRKML*
Ga0066395_100778841	3300004633	Tropical Forest Soil	GPHDAAIVIEAEGPEPINKLMSSVQSLGNVKMKFIRAFSIEEMRKMV*
Ga0066395_108314892	3300004633	Tropical Forest Soil	HDAAMIIEAEGPEPIHKFMASVQSLGNVRMKFVRTFSIEEMRKML*
Ga0066676_107565052	3300005186	Soil	HDAAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRTFSIDEMRKMV*
Ga0068999_100930372	3300005205	Natural And Restored Wetlands	VEAEGPESINKFMASVQSLGNVKMKFIRAFSIDEMRKMV*
Ga0070661_1012174472	3300005344	Corn Rhizosphere	TPSGPHDAAIVIEAEGPEPINKLMCTVQSLGNVKMKFVRAFSIEEMRKMV*
Ga0070671_1013648752	3300005355	Switchgrass Rhizosphere	AIVIEAEGPEPINKLMCTVQSLGNVKMKFVRAFSIEEMRKMV*
Ga0070674_1001454711	3300005356	Miscanthus Rhizosphere	GPHDAAIVIEAEGPEPINKLMCSVQSLGNVKMKFVRAFSIDEMRRMVRD*
Ga0066661_102629794	3300005554	Soil	FYTPGGPHDAAIIIEAEGPEPINKFMSSVQSLGNVKMKFIRTFSIEEMRKMV*
Ga0068861_1023904242	3300005719	Switchgrass Rhizosphere	VEAEGPEPIHKFISSVQSLGNVKMKFIRAFSIDEMRKMV*
Ga0066903_1005244212	3300005764	Tropical Forest Soil	MIIEAEGPEPIHKFMASVQSLGNVRMKFVRTFSIEEMRKML*
Ga0068860_1017916992	3300005843	Switchgrass Rhizosphere	HDAAIVIEAEGPEPINKLMCSVQSLGNVKMKFVRAFSIDEMRRMVRD*
Ga0066656_101995453	3300006034	Soil	FYTPGGPHDAAILIEAESPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV*
Ga0070716_1004830341	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GPHDAAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV*
Ga0079222_117283391	3300006755	Agricultural Soil	GPEPINKLMCSVQSLGNVKMKFVRAFSIDEMRRMVHD*
Ga0075420_1007320581	3300006853	Populus Rhizosphere	GPHDAAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRVFSIEEMRKMV*
Ga0075434_1020822941	3300006871	Populus Rhizosphere	GSHDAAIVIEAERPGPINKLMCSVQSLGNVKMKFVRAFSIDEMRKMVRD*
Ga0075426_109601882	3300006903	Populus Rhizosphere	KDLFYTPGGPHDAAIVIEAEGPEPINKFMSSIQSLGNVKMKFIRTFSVEEMRKMV*
Ga0066710_1020526612	3300009012	Grasslands Soil	FYTPGGQHDAAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV
Ga0099828_107097161	3300009089	Vadose Zone Soil	IEAEGPEPINKLMASIQSLGNVKMKFIRAFSIEEMRKMV*
Ga0111539_102028954	3300009094	Populus Rhizosphere	PSGPHDAAIVIEAEGPEPINKLMCTVQSLGNVKMKFVRAFSIEEMRKMV*
Ga0075418_129021721	3300009100	Populus Rhizosphere	IIEAEGSESINKFMCSIQSLGNVKMKFIRAFSIEEMRKMV*
Ga0105092_100625831	3300009157	Freshwater Sediment	DAAIIIEADGPEPINKFMSSIQSLGNVKMKFIRAFSIEEMRKMI*
Ga0075423_106099854	3300009162	Populus Rhizosphere	AIVVEAEGPEPIHKFISSIQSLGNVKMKFIRVFTIEEMRKMV*
Ga0113563_108644083	3300009167	Freshwater Wetlands	FFTPGGPHDAAMVVEADGPEPIHKLMSSIQSLGNVKLKFIRAFSIEEMRKMV*
Ga0105347_11041421	3300009609	Soil	MVVEADGPEPIHKLMSSIQSLGNVKLKFIRAFSIEEMRKMV*
Ga0126374_101029993	3300009792	Tropical Forest Soil	VYTPGGPHDASIVIEAEGPEPIHKFMASVQSLGNVKMKFIRTFSIEEMRKML*
Ga0126374_101256665	3300009792	Tropical Forest Soil	GPHDAAIVIEAEGPEPIHKFMANIQSLGHVKMKFVRAFSIDEMRKMV*
Ga0126374_103721601	3300009792	Tropical Forest Soil	GPHDAAIVIEAEGPEPIHKFMANIQSLGHVKMKFVRAFSIEEMRKMV*
Ga0126374_117897072	3300009792	Tropical Forest Soil	HDASIVIEAEGPEPIHKFMASVQSLGNVKMKFVRAFSIEEMRKML*
Ga0105088_10250293	3300009810	Groundwater Sand	AEGPEPINKFMASLQSLGNVKLKFIRAFSIEEMRKMV*
Ga0105076_10489051	3300009816	Groundwater Sand	AEGPEPINKLMSNIQSLGNVKMKFIRAFSIEEMRKMV*
Ga0105062_10401712	3300009817	Groundwater Sand	EAEGPEPINKFMSSVQSLGNVKMKFIRTFSVEEMRKMV*
Ga0126382_102564383	3300010047	Tropical Forest Soil	EGPEPIHKFMANIQSLGHVKMKFVRAFSIDEMRKMV*
Ga0126382_108114902	3300010047	Tropical Forest Soil	KVNVKDVHFTPGGPHDAAMAIEAEGPEPIHKFMASVQSLGNVKMKFVRTFSIEEMRKML*
Ga0126382_123426011	3300010047	Tropical Forest Soil	TPGGPHDAAIVIEAEGPEPIHKFMSSVQSLGHVKMKFVRAFSIEEMRKMI*
Ga0126373_111640751	3300010048	Tropical Forest Soil	TPGGPHDAAIVIEAEGPEPINKLMSSVQSLGNVKMKFIRAFSIEEMRKMV*
Ga0126373_122978502	3300010048	Tropical Forest Soil	QVKDLVYTPGGPHDASIVIEAEGPEPIHKFMASVQSLGNVKMKFVRTFSIEEMRKML*
Ga0126373_125877471	3300010048	Tropical Forest Soil	EAEGPEPINKFLASVQSLGNVKMKFVRAFSIEEMRKMV*
Ga0134088_100889203	3300010304	Grasslands Soil	HDAAILIEAESPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV*
Ga0134088_101443622	3300010304	Grasslands Soil	AIIIEAEGPEPINKFMASIQSLGNVKMKFIRAFSVEEMRKMV*
Ga0134088_107025372	3300010304	Grasslands Soil	VAEGPESINKFMSSVQSLGNVKMKFVRAFSIEEMRKMV*
Ga0134063_101547122	3300010335	Grasslands Soil	DAAIIIEAEGPEPINKFMSSVQSLGNVKMKFIRTFSIEEMRKMV*
Ga0126376_103495614	3300010359	Tropical Forest Soil	YTPGGPHDAAMVIEAEGPEPIHKFMASVQALGNVKMKFVRAFSIEEMRKMV*
Ga0126376_109334871	3300010359	Tropical Forest Soil	AEGPEPIHKFMANIQSLGNVKMKFIRAFSIEEMRKIV*
Ga0126377_100631766	3300010362	Tropical Forest Soil	AKKLKVNVKDVHFTPGGPHDAAMAIEAEGPEPIHKFMASVQSLGNVKMKFVLTFSIEEMRKML*
Ga0126381_1038351501	3300010376	Tropical Forest Soil	HDAAIVIEAEGPEPINKLMSSVQSLGNLKMKFIRAFSIEEMRKIV*
Ga0136851_104171083	3300010413	Mangrove Sediment	MFIEAESPGPIQKFMASVQSLGNVKMKFVRAFSIEEMRKVV*
Ga0137392_102981062	3300011269	Vadose Zone Soil	DAAILIEAEGPEPINKLMASIQSLGNVKMKFIRAFSIEEMRKMV*
Ga0137340_10478193	3300011405	Soil	EAEGPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV*
Ga0137423_12563312	3300011430	Soil	GPHDAAIVVEAEGPEPIHKFISSVQSLGNVKMKFIRTFSVEEMRKMV*
Ga0137431_10201074	3300012038	Soil	HDAAIVVEAEGPESINKFMASVQSLGNVKMKFIRAFSIEAMRKMV*
Ga0137363_106121383	3300012202	Vadose Zone Soil	MVVEAEGPEPIHKLMSSVQSLGNVKMKFIRAFSIEEMRKMV*
Ga0137363_107253862	3300012202	Vadose Zone Soil	PEPINKFMSSIQSLGNVKMKFIRAFSIEEMRKMV*
Ga0137374_102674291	3300012204	Vadose Zone Soil	ILIEAESPEPINKFMSSIQSLGNVKMKFIRAFSIEEMRKMV*
Ga0137362_101397763	3300012205	Vadose Zone Soil	MVVEAEGPEPIHKLMSSVQSLGNVKMKFMRAFSIEEMRKMV*
Ga0137378_102756324	3300012210	Vadose Zone Soil	AAILIEAESPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV*
Ga0137386_101768721	3300012351	Vadose Zone Soil	DVFYTPGGPHDAAIVIEAEGPEPINKFMASVQSLGNVKMKFIRTFSIDEMRKMV*
Ga0137375_106253192	3300012360	Vadose Zone Soil	PEPINKFMSSVQSLGNVKMKFIRTFSIEEMRKMV*
Ga0137375_111539931	3300012360	Vadose Zone Soil	GGPHDAAIVIEAEGPEPINKFMSSVQSLGNVEMKFIRAFSTDEMRKMV*
Ga0137397_107200262	3300012685	Vadose Zone Soil	FYTPGGPHDAAIIIEAEGPEPINKLMSSIQSLGNVKMKFIRAFSIEEMRKMV*
Ga0137404_103997521	3300012929	Vadose Zone Soil	DAAIIIEAEGPEPINKLMSSIQSLGNVKMKFIRAFSIEEMRKMV*
Ga0137407_112449701	3300012930	Vadose Zone Soil	IEAEGPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV*
Ga0126375_118488011	3300012948	Tropical Forest Soil	DLFYTPGGPHDAAIVIEAEGPEPIHKFMSSVQSLGHVKMKFVRAFSIEEMRKMV*
Ga0126369_103398801	3300012971	Tropical Forest Soil	DAAIVIEAEGPEPIHKFMANIQSLGHVKMKFVRAFSIDEMRKMV*
Ga0163162_130004951	3300013306	Switchgrass Rhizosphere	GPHDAAIVIEAEGPEPINKLMCTVQSLGNVKMKFVRAFSIEEMRKMV*
Ga0075321_11389921	3300014300	Natural And Restored Wetlands	PEPIHKFMGSTQSLGNVRVKFVRAFSIEEMRKMV*
Ga0132258_102496111	3300015371	Arabidopsis Rhizosphere	PHDAAIVIEAEGPEPIHKFMASIQSLGNVKMKFVRAFSIEEMRKIV*
Ga0132258_111545481	3300015371	Arabidopsis Rhizosphere	MLIEAEGPEPINKLMCSIQSLGNVKMKFVRAFSIEEMRKMV*
Ga0132257_1004075581	3300015373	Arabidopsis Rhizosphere	MLIEAEGPEPINKLMCSIQSLGNVKMKFVRAFSIEEMRKMVRD*
Ga0182039_103105981	3300016422	Soil	DAAIVIEAEGPEPIHKFMANIQSLGNVKMKFVRAFSIEEMRKMV
Ga0187776_111284871	3300017966	Tropical Peatland	AEGPEPIHKFMASIQSLGNVKMKFVRAFSIEEMRKIV
Ga0184605_102947821	3300018027	Groundwater Sediment	IVIEAEGPEPINKFMSSVQSLGNVKMKFIRTFSVEEMRKMV
Ga0184626_103608451	3300018053	Groundwater Sediment	LFYTPGGPHDAAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV
Ga0184621_101219323	3300018054	Groundwater Sediment	DAAIVIEAEGPEPINKFMSSVQSLGNVKLKFIRAFSVEEMRKMV
Ga0184624_103661281	3300018073	Groundwater Sediment	GPHDAAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRAFSVDEMRKMV
Ga0184625_105370452	3300018081	Groundwater Sediment	FFTPGGPHDAAMVVEAEGPEPIHKFMSSIQSLGNVKMKFIRAFSIDEMRKMV
Ga0184628_104227533	3300018083	Groundwater Sediment	EAEGPEPIHKFISSVQSLGNVKMKFIRAFSIDEMRKMV
Ga0190265_127519652	3300018422	Soil	IEAEGPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV
Ga0180110_10191511	3300019208	Groundwater Sediment	HDAAIVVEAEGPESIHKFMASVQSLGNVKMKFIRAFSIDEMRKMV
Ga0184648_13383382	3300019249	Groundwater Sediment	AAMIIEAEGPESINKLMASVQSLGNVKMKFIRAFSIEEMRKMV
Ga0184646_12787422	3300019259	Groundwater Sediment	DAAIVVEAEGPEPINKFMSSIQSLGNVKMKFIRAFSIEEMRKMV
Ga0173482_100255334	3300019361	Soil	PHDAAIVIEAEGPEPINKLMCSVQSLGNVKMKFVRAFSIDEMRRMVRD
Ga0126371_119219482	3300021560	Tropical Forest Soil	GPEPINKFLASVQSLGNVKMKFVRAFSIEEMRKMV
Ga0222625_14177272	3300022195	Groundwater Sediment	AIVIEAEGPEPINKFMSSVQSLGNVKMKFIRAFSVEEMRKMV
Ga0124853_12111092	3300024056	Freshwater Wetlands	MVVEAEGPEPIHKFMSSVQSLGNVKMKFIRAFSIEEMRKMV
Ga0209980_100481511	3300024516	Deep Subsurface	FTPSGPHDAAIVVEAESREPIGKFMSSVQSLGNVKMTFIRTFSIEEMRKMV
Ga0209980_101078531	3300024516	Deep Subsurface	QVKDILFTPSGPHDAAIVVEAESREPIGKFMSSVQSLGNVKMKFVRGFSIEEMRKMV
Ga0209520_105990233	3300025319	Soil	VEAEGPEPINRFMSSVQSLGNVKMKFIRAFSIEEMRKMV
Ga0209640_111949391	3300025324	Soil	AEGPEPINKLMSNIQSLGNVKMKFIRAFSIEEMRKMV
Ga0207644_106505281	3300025931	Switchgrass Rhizosphere	TPGGPHDAAIVIEAEGPEPINKLMCSVQSLGNVKMKFVRAFSIDEMRRMVRD
Ga0207679_102767892	3300025945	Corn Rhizosphere	VQVRVLFYTPGGSHDAAIVIEAERPGPINKLMCSVQSLGNVKMKFVRAFSIDEMRKMVRD
Ga0210102_10799432	3300025971	Natural And Restored Wetlands	SKADAAKLGLQVRDLFYTPSGPHDAAIFIEAEGPEPINKFMANTQSMGNTKMKFVRAFSIDEMRRML
Ga0207702_102265761	3300026078	Corn Rhizosphere	FYTPGGPHDAAIVIEAEGPEPINKLMCSVQSLGNVKMKFVRAFSIDEMRRMVRD
Ga0209161_102509532	3300026548	Soil	IFYTPGGPHDAAIIIEAEGPEPINKFMSSVQSLGNVKMKFIRTFSIEEMRKMV
Ga0209877_10180831	3300027032	Groundwater Sand	FYTPGGPHDAAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV
Ga0209982_10920271	3300027552	Arabidopsis Thaliana Rhizosphere	MIAAIIIEAEGPETINKFMSSVQSLGNVKMKFIRAFSIEEMRKML
Ga0209819_100299892	3300027722	Freshwater Sediment	MHFVFSVARNLKGGQHDAAILIEAEGPEPINKFMSSVQSLGNVKMKFVRAFSIEEMRKMV
Ga0209382_109957653	3300027909	Populus Rhizosphere	GPESINKFMSSVQSLGNVKMKFIRAFSIEEMRKMI
Ga0209889_10328571	3300027952	Groundwater Sand	IIEAEGPEPINKFMASVQSLGNVKLKFIRAFSIEEMRKMV
Ga0209857_10626862	3300027957	Groundwater Sand	AAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMV
Ga0209857_10898852	3300027957	Groundwater Sand	FYTPGGPHDAAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRTFSIEEMRKMV
Ga0247820_111679461	3300028597	Soil	DGPEPINKFMSSVQSLGNVKMKFIRAFSIEEMRKMI
Ga0302046_108787752	3300030620	Soil	PIHKCMASIQSLGNVKMKFVRAFSIEEMRKMVSSG
Ga0308189_105565941	3300031058	Soil	PHDAAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRTFSVEEMRKMV
Ga0310813_117919041	3300031716	Soil	PGGPHDAAIVIEAEGPEPINKLMCSVQSLGNVKMKFVRAFSIEEMRKMVRD
Ga0310912_107620062	3300031941	Soil	GPEPIHKFMVSVQSLGNVKMKFVRTFSIEEMRKML
Ga0326597_110719743	3300031965	Soil	IEAEGPEPINKFLASVQSLGNVKMKFIRAFSVDEMRKMV
Ga0310902_113147791	3300032012	Soil	DAAIVIEAEGPEPINKLMCSVQSLGNVKMKFVRAFSIEEMRKMV
Ga0310810_102123621	3300033412	Soil	PEPINKLMCSVQSLGNVKMKFVRAFSIEEMRKMVRD
Ga0310810_103316211	3300033412	Soil	EAEGPEPINKLMCSVQSLGNVKMKFVRAFSIDEMRRMVRD
Ga0364931_0169164_1_162	3300034176	Sediment	VFYTPGGPHDAAIVIEAEGPEPINKFMSSVQSLGNVKMKFIRTFSIEEMRKMV
Ga0364932_0047910_1_129	3300034177	Sediment	AIVVEAEGPEPIHKFISSVQSLGNVKMKFIRAFSIEEMRKMV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079115

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences