NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F079128

Metagenome / Metatranscriptome Family F079128

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F079128
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 73 residues
Representative Sequence HFTVRTELHPDHVRIEAEDLGGPWRRRQPDGRPHGLDLVEALTGPDGWGTETTTGGGRIVWARLDLEVAGE
Number of Associated Samples 105
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.80 %
% of genes near scaffold ends (potentially truncated) 79.31 %
% of genes from short scaffolds (< 2000 bps) 88.79 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (81.034 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(11.207 % of family members)
Environment Ontology (ENVO) Unclassified
(25.862 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.379 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 9.09%    β-sheet: 28.28%    Coil/Unstructured: 62.63%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF01966HD 56.03
PF00324AA_permease 6.03
PF10009DUF2252 0.86
PF00392GntR 0.86
PF06114Peptidase_M78 0.86
PF00561Abhydrolase_1 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG0531Serine transporter YbeC, amino acid:H+ symporter familyAmino acid transport and metabolism [E] 6.03
COG0833Amino acid permeaseAmino acid transport and metabolism [E] 6.03
COG1113L-asparagine transporter or related permeaseAmino acid transport and metabolism [E] 6.03
COG1115Na+/alanine symporterAmino acid transport and metabolism [E] 6.03

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.03 %
UnclassifiedrootN/A18.97 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004152|Ga0062386_101326924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia599Open in IMG/M
3300004152|Ga0062386_101849929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia504Open in IMG/M
3300005093|Ga0062594_100249609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1296Open in IMG/M
3300005328|Ga0070676_10724215All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia728Open in IMG/M
3300005329|Ga0070683_100289889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae1557Open in IMG/M
3300005367|Ga0070667_102369287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia500Open in IMG/M
3300005434|Ga0070709_11663715Not Available521Open in IMG/M
3300005437|Ga0070710_10480743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia847Open in IMG/M
3300005437|Ga0070710_11234525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia554Open in IMG/M
3300005456|Ga0070678_101522492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia627Open in IMG/M
3300005471|Ga0070698_101539521All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia617Open in IMG/M
3300005537|Ga0070730_10369380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia932Open in IMG/M
3300005577|Ga0068857_102462376Not Available511Open in IMG/M
3300005602|Ga0070762_10714646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia673Open in IMG/M
3300005841|Ga0068863_100429386All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1295Open in IMG/M
3300005921|Ga0070766_10570692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium757Open in IMG/M
3300006028|Ga0070717_11718034All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300006059|Ga0075017_101217392All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia590Open in IMG/M
3300006102|Ga0075015_100933457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia528Open in IMG/M
3300006173|Ga0070716_100230053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1251Open in IMG/M
3300006579|Ga0074054_12103658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia760Open in IMG/M
3300006806|Ga0079220_10686397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia749Open in IMG/M
3300006806|Ga0079220_11883984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces530Open in IMG/M
3300007982|Ga0102924_1155534Not Available1049Open in IMG/M
3300009174|Ga0105241_11837358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia592Open in IMG/M
3300009177|Ga0105248_13428412Not Available503Open in IMG/M
3300009521|Ga0116222_1053086All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1765Open in IMG/M
3300009524|Ga0116225_1506872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia536Open in IMG/M
3300009698|Ga0116216_10450532All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia779Open in IMG/M
3300009700|Ga0116217_10427225Not Available838Open in IMG/M
3300009824|Ga0116219_10471999All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia695Open in IMG/M
3300009839|Ga0116223_10855768Not Available519Open in IMG/M
3300010379|Ga0136449_104557077All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia508Open in IMG/M
3300010397|Ga0134124_11004332All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia846Open in IMG/M
3300010401|Ga0134121_11215721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia754Open in IMG/M
3300010876|Ga0126361_10796264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia801Open in IMG/M
3300010876|Ga0126361_11006571All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia910Open in IMG/M
3300010880|Ga0126350_10193009All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia785Open in IMG/M
3300011003|Ga0138514_100132710Not Available550Open in IMG/M
3300011106|Ga0151489_1533623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia647Open in IMG/M
3300011269|Ga0137392_11145688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia635Open in IMG/M
3300012203|Ga0137399_11100026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia669Open in IMG/M
3300012206|Ga0137380_11372673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia591Open in IMG/M
3300012209|Ga0137379_10821322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia834Open in IMG/M
3300012349|Ga0137387_11260969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia519Open in IMG/M
3300012359|Ga0137385_10039140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4249Open in IMG/M
3300012501|Ga0157351_1059315Not Available523Open in IMG/M
3300012503|Ga0157313_1021684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia661Open in IMG/M
3300012930|Ga0137407_10149065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2065Open in IMG/M
3300012955|Ga0164298_11649918Not Available507Open in IMG/M
3300012984|Ga0164309_10215752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1330Open in IMG/M
3300013306|Ga0163162_10552809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1279Open in IMG/M
3300013308|Ga0157375_10161845All Organisms → cellular organisms → Bacteria2380Open in IMG/M
3300014201|Ga0181537_10459209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia873Open in IMG/M
3300014497|Ga0182008_10557312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia638Open in IMG/M
3300014968|Ga0157379_11594701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia637Open in IMG/M
3300014969|Ga0157376_11613374All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia683Open in IMG/M
3300015371|Ga0132258_13832535Not Available1024Open in IMG/M
3300016445|Ga0182038_10413813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1133Open in IMG/M
3300017926|Ga0187807_1248123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia583Open in IMG/M
3300018006|Ga0187804_10451793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia573Open in IMG/M
3300018034|Ga0187863_10756237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia550Open in IMG/M
3300018037|Ga0187883_10284865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis panacis844Open in IMG/M
3300018042|Ga0187871_10212875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1078Open in IMG/M
3300018086|Ga0187769_10993218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia635Open in IMG/M
3300018090|Ga0187770_11011048All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia669Open in IMG/M
3300018433|Ga0066667_11349180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia624Open in IMG/M
3300019789|Ga0137408_1059833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1318Open in IMG/M
3300021178|Ga0210408_10266050All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1366Open in IMG/M
3300021181|Ga0210388_11812347Not Available502Open in IMG/M
3300021433|Ga0210391_10454508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1006Open in IMG/M
3300021478|Ga0210402_10990524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia767Open in IMG/M
3300021479|Ga0210410_11190092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia654Open in IMG/M
3300025898|Ga0207692_10208645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1152Open in IMG/M
3300025906|Ga0207699_10384576All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia997Open in IMG/M
3300025915|Ga0207693_10136224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1931Open in IMG/M
3300025916|Ga0207663_11241961All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia600Open in IMG/M
3300025924|Ga0207694_10364223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1198Open in IMG/M
3300025928|Ga0207700_10433490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1156Open in IMG/M
3300025928|Ga0207700_12030812Not Available502Open in IMG/M
3300026095|Ga0207676_10396428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1289Open in IMG/M
3300027625|Ga0208044_1142716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia669Open in IMG/M
3300028381|Ga0268264_12656613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia505Open in IMG/M
3300030053|Ga0302177_10225820All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1021Open in IMG/M
3300030058|Ga0302179_10173102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia954Open in IMG/M
3300030399|Ga0311353_10397130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1241Open in IMG/M
3300030399|Ga0311353_11351015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia582Open in IMG/M
3300030494|Ga0310037_10287306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia704Open in IMG/M
3300030617|Ga0311356_10810599All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia888Open in IMG/M
3300030618|Ga0311354_10926745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia810Open in IMG/M
3300030707|Ga0310038_10319117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia695Open in IMG/M
3300030739|Ga0302311_11016250Not Available523Open in IMG/M
3300031236|Ga0302324_101682414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia813Open in IMG/M
3300031236|Ga0302324_102526761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia626Open in IMG/M
3300031525|Ga0302326_10065814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6757Open in IMG/M
3300031525|Ga0302326_11789071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia805Open in IMG/M
3300031713|Ga0318496_10335113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia836Open in IMG/M
3300031748|Ga0318492_10429047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia697Open in IMG/M
3300031893|Ga0318536_10585916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia558Open in IMG/M
3300031912|Ga0306921_11210425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia841Open in IMG/M
3300032010|Ga0318569_10462187All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia592Open in IMG/M
3300032076|Ga0306924_12422685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia529Open in IMG/M
3300032091|Ga0318577_10344230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia713Open in IMG/M
3300032160|Ga0311301_10792433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1304Open in IMG/M
3300032160|Ga0311301_12079663All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia658Open in IMG/M
3300032770|Ga0335085_10382274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1640Open in IMG/M
3300032770|Ga0335085_12079518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia574Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil11.21%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere11.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.34%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa9.48%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.45%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.59%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.59%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil2.59%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.72%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.72%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.72%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.72%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.72%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.86%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.86%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.86%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.86%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.86%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.86%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.86%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.86%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.86%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.86%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012503Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_RHost-AssociatedOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017926Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062386_10132692413300004152Bog Forest SoilPAQWLVHRWRLPDREDTPDRSRSEYFTVRAELHPDHVRVEAEDFGGPWRRRQPDGRPHGLDVVRALTGPDGWGVETTAGGGRVVWARLDLEAAGE*
Ga0062386_10184992913300004152Bog Forest SoilHPDHVRVEAEDLGGPWRRRQPDGRPHGLDVVRALTGPDGWGVETTTDGGRVVWARLDLEAAGE*
Ga0062594_10024960923300005093SoilLRPGHVRIEAEDLGGPWRRRQPDGRPHGLDVVEALTGQDGWGVETTTDGGRVVWARLDLTAGSEAPRHQPIDDPLSL*
Ga0070676_1072421523300005328Miscanthus RhizosphereLRPGHVRIEAEDLGGPWRRRQPDGRPHGLDVVEALTGQDGWGVETTTDGGRVVWARLDLTAGE*
Ga0070683_10028988923300005329Corn RhizosphereLRPGHVRIEAEDLGGRWRRRQPDGRPHGLDVVEALTGQDGWGVETTTDGGRVVWARLDLTAGE*
Ga0070667_10236928723300005367Switchgrass RhizosphereRTELHPDHVRIEAEDSGGPWRRRHPDGRPHGLDVVKALAGPDGWGTEITTTGGRIVWARLDLNTAGE*
Ga0070709_1166371523300005434Corn, Switchgrass And Miscanthus RhizosphereHSRSRAGHFTVSTELHEDHVRIEAEDLGGPWRRRQPDGRPHGLDMVEALTGPDGWGTETTTGGGRIVWARLDLDAADE*
Ga0070710_1048074323300005437Corn, Switchgrass And Miscanthus RhizosphereSRAGHFTVRTELHPDYVRIEAQDSGGPWRRRQPDGRPHGLDIVEALTGPDGWGTETTTGGGRLVWARLGLAARK*
Ga0070710_1123452523300005437Corn, Switchgrass And Miscanthus RhizosphereDHVLIEAEDLGGPWRPRPSSDRPHGLNVVEALTGPEGWGINTTGDGGRVVWARLDLKATGE*
Ga0070708_10085073723300005445Corn, Switchgrass And Miscanthus RhizosphereVRIEAEDFGGPWRRRQPDGRPHGLDMVEALTGPDGWDTETTTGGGRIVWARLDLDATGE*
Ga0070678_10152249213300005456Miscanthus RhizosphereIVRVELRPGHVRIEAEDLGGRWRRRQPDGRPHGLDVVEALTGQDGWGVETTTDGGRVVWARLDLTAGE*
Ga0070698_10153952123300005471Corn, Switchgrass And Miscanthus RhizosphereELHPDHVRIETEDSGGPWRRKQPDGRPHGLDVVEALTGPDGWGAETTTGGGRIVWARLDLDAAGE*
Ga0070730_1036938013300005537Surface SoilAVVHSASQGQFFTVRAERHPDYIWVEAEDLGGPWRCRHPDGRPHGLDLVGALTGPDGWGVETTTGGRRVVWARLDLV*
Ga0068857_10246237613300005577Corn RhizosphereSRSRAGHFSVCIELHPDHVRIETEDSGGPWRRRQPDGRPHGLDVVEALTGPDGWGTETTTGGGRIVWARLDLDAAGE*
Ga0070762_1071464613300005602SoilSNAVVHSASQGQFFTVRAERHPDYVWVEAEDLGGPWRCRRPDGRPHGLDVVEALTGPDGWGVETTTSGRRVVWARLDLV*
Ga0068863_10042938643300005841Switchgrass RhizosphereLRPGHVRIEAEDLGGRWRRRQPDGRPHGLDVVEALTGQDGWGVETTTDGGRVVWARLDLTAGSEAPRHQPIDDPLSL*
Ga0070766_1057069233300005921SoilVEDEGGPWRPRRRDDGRPHGLDVVAALAGPGNWGVQRTGDRSRIVWARLDLAAPGRTPGAVT*
Ga0070717_1171803423300006028Corn, Switchgrass And Miscanthus RhizosphereLHSQSRCGQFTIRVELHPDHVRIEAEDLGGPWRPRPSGDRPHGLNVVEALVGPEGWGVKTTGDGGRVVWARLDLEATGE*
Ga0075017_10121739213300006059WatershedsAILFSRSRTGHFTVRSELHPDHVRVEVEDLGGPWRRRQPDGRPHGLDLVEALTGPDGWGVETTTGGGRVVWARLDLEEAGE*
Ga0075015_10093345713300006102WatershedsELHPDHVRVEVEDLGGPWRRRQPDGRPHGLDLVEALTGPDGWGVETTTGGGRVVWARLDLEEAGE*
Ga0070716_10023005323300006173Corn, Switchgrass And Miscanthus RhizosphereSRAGHFTVRTELHPDHVRIEAQDSGGPWRRGQPDGRPHGLDIVEALTGPDGWGTETITGGGRLVWARLGLAARK*
Ga0074054_1210365823300006579SoilAVLIASELSANAILHSRSRAGHFSVCIELHPDHVRIEAEDFGGPWRRRQHDGRPHGLDIVEALTGPDGWGTETTTGGGRIVWARLDLDAAGE*
Ga0079220_1068639723300006806Agricultural SoilRTELHPDHIRIEAEDSGGPWRRRQPDGHPHGLDMVEALTGPDGWGAETTTGGGRIVWARLDLDAAGE*
Ga0079220_1188398423300006806Agricultural SoilHFTVRIELHPDHVRIEAEDCGGPWRRRRSDGRPHGLDMVEALTGPDGWGTETTTGGGRIVWARLDLDAAGE*
Ga0102924_115553413300007982Iron-Sulfur Acid SpringAYPDYVWVEVEDLGGPWRARQPDGRPHGLDLVNALAGPDNWGTETTSDGDRIVWARLDIPRDGNQR*
Ga0105241_1183735813300009174Corn RhizosphereHPDHVRIEAEDSGGPWRHRQPDGRPHGLDMVEALTGPDGWGTETTTDGGRLVWVCLHLPPAE*
Ga0105248_1342841223300009177Switchgrass RhizosphereILHSRSRAAHFTIRTELHPDHVRIEAEDLGGPWRRRRPDGRPHGLDIVEAFTGTDGWATEITTGGGRIVWARLDLDTTDE*
Ga0116222_105308613300009521Peatlands SoilLHPDHVRVEAEDLGGPWRRRQPDGRPHGLDVVRALTGPDGWGVETTTDGGRVVWARLDLEAVGE*
Ga0116222_140056723300009521Peatlands SoilWVEAEDLGGPWHCRRPDGRPHGLDVIEALTGPDGWGVETTTGGGRVVRARLELETAGE*
Ga0116225_150687213300009524Peatlands SoilPDHVRVEAEDLGGPWRRRQPDGRPHRLDVVQALTGPGGWGVETTTDGGRVVWACLDLEAAGE*
Ga0116216_1045053223300009698Peatlands SoilFIVRAELHPDHVRVEAEDLGGPWRRRRPDGRPHGLDLVEALTGPDGWGVETTTGGGRVVWARLDLEEAGE*
Ga0116217_1042722523300009700Peatlands SoilLAANAILHSRSRTEHFTVRAELHPDHVWVEAEDLGGPWRRRQPDGRPHGLDVVKALTGPDGWGVETTTDGGRVVWARLDLEAAGE*
Ga0116219_1047199923300009824Peatlands SoilIASELAANAILHSRSRTEHFTVRAEVHPDYVRVEAEDLGGPWRRRQPDGRPHGLDVIRALTGPDGWGVETPTGGGRVVWARLDLEAAGE*
Ga0116223_1085576823300009839Peatlands SoilLHSRSRTEHFTVRAELYPDHVRVEAEDLGGPWRRRQPDGRPHGLDVVQALTGPGGWGVETTTDGGRVVWACLDLEAAGE*
Ga0136449_10455707713300010379Peatlands SoilVVHSASQGQFFTVRAERHPGYVRVEAEDLGGPWRRRRPDGRPHGLDIVEALTDPDGWGVETTTDGGRVVWARLDLV*
Ga0134124_1100433213300010397Terrestrial SoilFTVRTELHPDYVRIEAEDFGGPWRGRQPDGRPHGLDLVEALTGPDRWGTETTTDGGRIVWARLDLDAADE*
Ga0134121_1121572123300010401Terrestrial SoilSVCIELHPDHVRIETEDSGGPWRRRQPDGRPHGLDVVEALTGPDGWGTETTTGCGRIVWARLDLDAAGE*
Ga0126361_1079626423300010876Boreal Forest SoilSASRGEFFTIRAELHADYVWVEAEDLGGPWRSRQHDDRPHGLDVVEALTGPDGWGTEPAGDGGRVVWARLDLEAGE*
Ga0126361_1100657113300010876Boreal Forest SoilTVRTELHPDHVRVEAEDLGGPWCQSQPDHRPHGLDIVEALTGPDGWGVETTTGGGRIVWARLDLLPAV*
Ga0126350_1019300923300010880Boreal Forest SoilQGQFFTVRAERHPGYIWVEAEDLGGPWRCRLPDGRPHGLDVIEALTGPDGWGVETTIGGRRLVWARLDLV*
Ga0138514_10013271023300011003SoilSRSRAGHFTVRIELHPDHVRIEAEDFGGPWRRRQSDGRPHGLDVVEALTGQDGWGTETTTGGGRIVWARLDLNVAGA*
Ga0151489_153362313300011106SoilTVRTELHPDHVRIEAEDLGGPWRRRRPDGRPHGLDVVEALAGRDGWGAEITADGGRLVWVRLDLPPGE*
Ga0137392_1114568813300011269Vadose Zone SoilNAILHSRSRAGHFSVRAELHPDHVRVEAEDLGGPWRRRQPDGRPHGLDVVRALTGPDGWGVETTTDGGRVVWARLDLEAAGE*
Ga0137399_1110002623300012203Vadose Zone SoilHSRSRAGHFTVRIELHPDHVRIEAEDFGGPWRRRQPDGRPHGLDMVEALTGPDGWGTETTTGGGRIVWARLDLDAAGG*
Ga0137380_1137267323300012206Vadose Zone SoilVRREIAHSRSRAGHFTVRAELHPDHVRIEAEDLGGPWRRRQPDGRPHGLDVVEALVGRDGWGTEITADGGRLVWVCLDLPPAE*
Ga0137381_1024201233300012207Vadose Zone SoilEAEDLGGPWRRRQPDGRPHGLDVVEALVGRDGWGTEITADGGRLVWVRLDLPPAE*
Ga0137379_1082132213300012209Vadose Zone SoilHPDHVRIEAEDFGGPWRRRQPDGRPHGLDVVEALTGPDGWGTETTAAGGRIVWARLDLDAAGE*
Ga0137377_1109886113300012211Vadose Zone SoilIEAEDFGGPWRRRQLDGRPHGLDMVEALTGPDGWGTETTTGCGRIVWARLDLDVAGE*
Ga0137387_1126096923300012349Vadose Zone SoilDHVRIEAEDLGGPWRRRQPDGRPHGLDVVEALVGRDGWGTEITADGGRLVWVRLDLPPAE
Ga0137385_1003914033300012359Vadose Zone SoilVRREIAHSRSRAGHFTVRAELHPDHVRIEAEDLGGPWRRRQPDGRPHGLDVVEALVGRDGWGTEITADGGRLVWVRLDLPPAE*
Ga0157351_105931523300012501Unplanted SoilRAGHFIVRTELHPYHVRIEAEDFGGPWRRKQPDGRPHGLEMVEALTGPDGWGTETTGGGRIVWARLDLAVAGE*
Ga0157313_102168423300012503Arabidopsis RhizosphereCATFTVRTELHPDHVRIEAEDLGGPWRRRQPDGRPHGLDMVEALTGPDGWGTETTSGGGRIVWARLDLAVAGE*
Ga0137407_1014906523300012930Vadose Zone SoilVPNCTRTILIEAEDLGRPWRPRPAGDRQHGLTVVEALTGPEGWGVKTTGDGGRVVWARLDLNAAGE*
Ga0164298_1164991823300012955SoilSRAGHFSVCIELHPDHVRIETEDSGGLWRRRQPDGRPHGLDVVEALTGPDGWGTETTAADGRIVWARLDLAAAGE*
Ga0164309_1021575213300012984SoilELAANAILHSRSRAGRFTIRTELHPDHVRIEAEDSGGPWRRRQPGGRPHGLDLVKALTGPDRWGTEITTSGGRIVWARLNLAAAGE*
Ga0163162_1055280933300013306Switchgrass RhizosphereLRPGHVRIEAEDLGGRWRRRQPDGRPHGLDVVEALTGQDGWGVETTTDGGRVVWARLDLKAGSEAPRHQPIDDPLSL*
Ga0157375_1016184523300013308Miscanthus RhizosphereLRPGHVRIEAEDLGGRWRRRQPDGRPHGLDVVEALTGQDGWGVETTTDGGRVVWVRLDLTAGE*
Ga0181537_1045920913300014201BogSASRGQFFTVRAELDLDHARVEVEDLGGSWRGRHSDGRPHGLDVVEAFTGPDGWGVETIADGGRVVWARLELAVGE*
Ga0182008_1055731223300014497RhizosphereAGHFTVRAELHPDHVRIEAEDLGGPWRRRQPDGRPHGLDVVEALGRDGWGAETTADGGRLVWVRLDLPPCE*
Ga0157379_1159470113300014968Switchgrass RhizosphereRSRTGHFTVRTELHPDYVRIEAEDFGGPWRRRQPDGRPHGLDVVEALTGPDGWGSETTTGGGRIVWANLDLAAGE*
Ga0157376_1161337413300014969Miscanthus RhizosphereGHFTVSTELHEDHVRIEAEDLGGPWRRRQPDGRPHGLDLVEALTGPDRWGTETTTDGGRIVWARLDLDAADE*
Ga0132258_1383253513300015371Arabidopsis RhizosphereVANAILHSRSRAGHFTVRTELHPDHVRIEAEDFGGPWRRRQPDGRPHGLDMIEALTGPHGWGTETTGGRIVWARIDLNTAGE*
Ga0182034_1028020023300016371SoilWVEAEDLGGPWCCRSPDGRPHGLDLVEALTGPDGWGVDTTTGGGRIVWARLDVAAGE
Ga0182038_1041381323300016445SoilANAILHSRSRAGHFTVRTELHPDHVRIEAEDFGGPWRRRQPDGRPHGLDMVEALTGPDGWGTETTTGGGRIVWARLDLDAASE
Ga0187807_124812313300017926Freshwater SedimentQFFTVRAEVFPGYVWVEAEDLGGPWRRRQPDDRPHGLDVVEALAGPGGWGVETTTGGRVVWARLDLPPGE
Ga0187781_1079107223300017972Tropical PeatlandVWVEAEDLGGPWRRRQADGRPHGLDVVEALTGPDGWGVETTTGGGRIVWARLDLEPGE
Ga0187804_1045179313300018006Freshwater SedimentIHSASRGQFFTVRAEVFPGYVWVEAEDLGGPWRRRQAADRPHGLDVVEALTGPDGWGVESTTGGGRIVWARLDLARGSDPARHRLSTGLSGV
Ga0187863_1075623713300018034PeatlandLHADYVWVETEDLGGPWRSRQRDDRPHGLDVVEALTGPDGWGTEPATDGGRVVWARLDLAAGE
Ga0187883_1028486523300018037PeatlandMRHTDCGEELASNAILHSRSRTEHFTVCAELHPDHVRVEAEDLGGPWRRRQPDGRPHGLDVVEALTGPDGWGTELASDGGRVVWARLDLAAGE
Ga0187871_1021287513300018042PeatlandMRHTDCGEEFASNAVLHSASRGEFFTVRAELHADYVWVEAEDLGGPWRSRQHDDRPHGLDVVEALTGLDGWGTELASDGGRVVWARLDLAAGE
Ga0187769_1099321813300018086Tropical PeatlandIVHSASRGQFFAVRAELFLGYVWVEAEDLGGPWRFRQSDGRSHGLDVVQALTGPDGWGVETTTDGGRVVWARLELAAGE
Ga0187770_1101104823300018090Tropical PeatlandPGYVWVEAEDLGGPWRIRQPDGRSHGLDVVQAVTGPDGWGIETTTDGGRVVWARLELAAG
Ga0066667_1134918023300018433Grasslands SoilVRTELHPDHVRIEAEDSGGPWRSRQPDGRPHGLDMVEALTRPDGWGTETTTAGGRIVWARLDLDVADE
Ga0137408_105983323300019789Vadose Zone SoilVPNCTRTILIEAEDLGRPWRPRPAGDRQHGLTVVEALTGPEGWGVKTTGDGGRVVWARLDLNAAGE
Ga0210407_1063780513300020579SoilRIEAEDFGGPWRRRQPDGRPHGLDMVEALTGPDGWGTETTTGGGRLVWARLGLAARK
Ga0210408_1026605023300021178SoilLAANAILHSRSRAGHFTVRTELHPDHVRIEAQDSGGPWRRRRPDGRPRGLDIVEALTGPDGWGTETTTGGGRLVWARLGLAARK
Ga0210388_1181234733300021181SoilESFTIRVELHRDYLRVECRDSGGPWRNRRQDDRPHGLNIVEALTGTDSWGTETVGNGSRIVWARLTW
Ga0210391_1045450833300021433SoilSASQGQFFTVRAERYPDYIWLETEDLGGPWRSRRPDGRPHGLDVVEALTGPDRWGVETTTGGGRVVWARLDLV
Ga0210402_1099052423300021478SoilELHLDHVRIEAEDFGGPWRRRQPDGRPHGLDVVEALTGPDGWGTEVTTGGARLVWARIDLNAAGE
Ga0210410_1119009223300021479SoilVRAERHPDYIRVEAEDLGGPWRCRRRDGRPHGLDVVEALTGPDGWGVETTTGGGRVVWARLDLV
Ga0207692_1020864533300025898Corn, Switchgrass And Miscanthus RhizosphereLRPGHVRIEAEDLGGPWRRRQPDGRPHGLDVVEALTGQDGWGVETTTDGGRVVWARL
Ga0207699_1038457623300025906Corn, Switchgrass And Miscanthus RhizosphereDHVRIEAEDSGGPWRRRQPDGRPHGLDIVEALTGPDGWGTETTTGGGRLVWARLGLAARK
Ga0207671_1158289713300025914Corn RhizosphereDYVRIEAEDFGGPWRRRQPDGRPHGLDLVEALTGPDRWGTETTTDGGRIVWARLDLDAAD
Ga0207693_1013622413300025915Corn, Switchgrass And Miscanthus RhizosphereLRPGHVRIEAEDLGGPWRRRQPDGRPHGLDVVEALTGQDGWGVETTTDGGRVVWARLDLTAGSEAPRH
Ga0207663_1124196123300025916Corn, Switchgrass And Miscanthus RhizosphereFTVRTELHPDHVRIEAEDLGGPWRRRQPDGRPHGLDVVEALAGQDGWGAEITAAGGRLVWVRLDLPPGE
Ga0207694_1036422333300025924Corn RhizosphereLRPGHVRIEAEDLGGRWRRRQPDGRPHGLDVVEALTGQDGWGVETTTDGGRVVWARLDLTAGSEAPRHQPIDDPLSL
Ga0207700_1043349013300025928Corn, Switchgrass And Miscanthus RhizosphereTELHPDYVRIEAQDSGGPWRRRQPDGRPHGLDIVEALTGPDGWGTETITGGGRLVWARLGLAARK
Ga0207700_1203081213300025928Corn, Switchgrass And Miscanthus RhizosphereHFTVRTELHPDHVRIEAEDLGGPWRRRQPDGRPHGLDLVEALTGPDGWGTETTTGGGRIVWARLDLEVAGE
Ga0207676_1039642843300026095Switchgrass RhizosphereRTGSIVRVELRPGHVRIEAEDLGGPWRRRQPDGRPHGLDVVEALTGQDGWGVETTTDGGRVVWARLDLTAGSEAPRHQPIDDPLSL
Ga0208044_114271613300027625Peatlands SoilVRTELHPDHVRVETEDLGGPWRRRQPDGRPHGLDVVRALTGPDGWGVETTTDGGRVVWARLDLETAGE
Ga0268264_1265661323300028381Switchgrass RhizosphereHPDHVRIEAEDFGGPWLRKQPDGRPHGLDVVEALTGPDGWGAETTTGGGRIVWARLDLDAAGE
Ga0302177_1022582023300030053PalsaNAVLHSASRGEFFTVRAELHADYVWVETEDLGGPWRSRGDDRPHGLDVVEALTGPDGWGTEPTSDGGRVVWARLDLAAGE
Ga0302179_1017310223300030058PalsaSNAVLHSASRGEFFTVRAELHADYVWVEVEDLGGPWRSRQGDDRPHGLDVVEALTGPDGWGTERTSDGGRVVWARLDLAVGE
Ga0311353_1039713033300030399PalsaNAVLHSASRGEFFTVRAELHADYVWVEVEDLGGPWRSRQGDDRPHGLDVVEALTGPDGWGTERTSDGGRVVWARLDLAVGE
Ga0311353_1135101523300030399PalsaTSRGQFFTVRAELYPNYGWVEVEDLGGPWRRGEPDGRSHGLDVVEALTGPDGWGVETTTDGGRVVWARLDLAPGV
Ga0310037_1028730623300030494Peatlands SoilSRSRTEHFIVRAELHPDHVRVEAEDLGGPWRRRQPDGRPHGLDVVRALTGPDGWGVETTTGGGRVVWARLDLEAAGE
Ga0311356_1081059913300030617PalsaFTVRAELHADYVWVEAEDLGGPWRSRQHDDRPHGLDVVEALTGPDGWGTELASDGGRVVWARLDLAAGE
Ga0311354_1092674513300030618PalsaFFTVRAELDPGHARVEVEDLGGSWRGRHSDGRPHGLDVVEAFTGPDGWGVETIADGGRVVWARLELAVGE
Ga0310038_1031911713300030707Peatlands SoilLHSRSRTEHFTVRAELYPDHVRVEAEDLGGPWRRRQPDGRPHGLDVVRALTGPDGWGVETTTDGGRVVWARLDLEAAGE
Ga0302311_1101625013300030739PalsaSNAVLHSASRGEFFTVRAELHADYVWVEAEDLGGPWRSRQHDDRPHGLDVVEALTGPDGWGTEPTSDGGRVVWARLDLAAGE
Ga0302324_10168241413300031236PalsaRTELHPDYVWIEAEDLGGPWRGTRPGDRPHGLDVVEALTGPDGWGTDTTSDGGRVVWARLDLAAGE
Ga0302324_10252676123300031236PalsaFTVRAELHADYVWVEAEDLGGPWRSRQHDDRPHGLDVVEALTGPDGWGTEPTSDGGRVVWARLDLAAGE
Ga0302326_1006581413300031525PalsaSRGEFFTVRAELHADYVWVEAEDLGGPWRSRQHDDRPHGLDVVEALTGPDGWGTEPTSDGGRVVWARLDLAAGE
Ga0302326_1178907113300031525PalsaLDPGHARVEVEDLGGSWRGRHSDGRPHGLDVVEAFTGPDGWGVETIADGGRVVWARLELAVGE
Ga0318496_1033511313300031713SoilANAILHSRSRAGHFTIRAELHPDYVRIEAEDFGGPWRRRQPDGRPHGLDMVEALTGPDGWGTETITTGGRRIVWARLDLEAAGE
Ga0318492_1042904713300031748SoilATLILSELAANAIVHSASRDQFFTIRAELFPDYLWIEVEDLGGPWRFRQPDGRPHGLEVVEALTGPDNWGVETTTDGDRIVWARLDLAPGE
Ga0318497_1070629613300031805SoilVRIVVEDFGGPWRRRLPDGRPHGLDVVVALTGPDGWGIEITTGGGRIVWARLDLDTPGA
Ga0318536_1058591623300031893SoilRVLHRPRGAPADYVWVEAEDLGGPWYCRPPDGRPHGLDLVEALTGQDGWGVETTTGGGRVVWARLDLTPGD
Ga0306921_1121042523300031912SoilLAANAIVHSASRGQLFTVRAEVFPGYVWVEAEDLGGPWHRRQADDRPHGLDVVEALTGPHGWGVETTTGGGRVVWARLDLTPGE
Ga0318569_1046218723300032010SoilLAANAIVHSRSRAGHFTIRTELHPDHVRIEAEDFGGPWRRRQPDGRPHGLDMVEALTGPDGWGTETTTGGGRIVWARLDLDAASE
Ga0306924_1242268523300032076SoilHFTVRAELHPDHVRIEAEDLGGPWRRRQPDDRPHGLDLIEALTGPNGWGVETTTGGGRVVWARLDLTPGE
Ga0318577_1034423023300032091SoilILHSRSRAGRFTVRTELHPGHVRIEAEDFGGPWRRRQPDGRPHGLDMVEALTGPDGWGTETTTGGGRIVWARLDLSAAGE
Ga0311301_1079243333300032160Peatlands SoilGQFFTVRAELYPDHVRVEAEDLGGPWRYRQPDYRPHGLDVVEALTGPDGWGIETTTEGGRIVWARLDLMPAV
Ga0311301_1207966313300032160Peatlands SoilLASNAILFSRSRTEHFTVRAELHPDHVRVEAEDLGGPWRRRPPDGRPHGLDVVRALTGPEGWGVETTTDGRVVWAHLDLEAAGE
Ga0335085_1038227443300032770SoilEELAANAILHSRSRAGHFAVRTELHPDHVRIEAEDSGGPWRRRQSDGRPHGLDMVEALTGPDGWGTETTPGGGRIVWARLDLDAAGE
Ga0335085_1207951823300032770SoilRSRAGHFTVRTELYPDHVRIEAEDSGGPWRRRQPDGRPHGLDVVEALAGPDGWGTETTTGGGRIVWARLALDAAGE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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