Metagenome Family F079239

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F079239
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	90 residues
Representative Sequence	MPKSTAPKRRRSPPKISALEKTALRIMRKLYEATGGQPQRWESLDNLGAVKADAAGVAYAVERDWLIISGGFHSVSLTEAGRRRVK
Number of Associated Samples	81
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.86 %
% of genes near scaffold ends (potentially truncated)	47.41 %
% of genes from short scaffolds (< 2000 bps)	84.48 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (56.034 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.552 % of family members)
Environment Ontology (ENVO)	Unclassified (32.759 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.586 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.09% β-sheet: 7.02% Coil/Unstructured: 57.89%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00565	SNase	6.03
PF00486	Trans_reg_C	5.17
PF05494	MlaC	4.31
PF08241	Methyltransf_11	2.59
PF00072	Response_reg	1.72
PF01925	TauE	0.86
PF00248	Aldo_ket_red	0.86
PF01381	HTH_3	0.86
PF00011	HSP20	0.86
PF12860	PAS_7	0.86
PF00196	GerE	0.86
PF05050	Methyltransf_21	0.86
PF02586	SRAP	0.86
PF13560	HTH_31	0.86
PF05717	TnpB_IS66	0.86
PF13683	rve_3	0.86
PF13817	DDE_Tnp_IS66_C	0.86
PF00561	Abhydrolase_1	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	4.31
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.86
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.86
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
All Organisms	root	All Organisms	43.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
cellular organisms	root	All Organisms → cellular organisms	43.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.45 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	7.76 %
Reyranellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae	1.72 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	7.76 %
Reyranella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella	1.72 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.03 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	7.76 %
Reyranella soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	1.72 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10010370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5085	Open in IMG/M
3300001661\|JGI12053J15887_10011398	All Organisms → cellular organisms → Bacteria	4876	Open in IMG/M
3300001661\|JGI12053J15887_10100174	All Organisms → cellular organisms → Bacteria → Proteobacteria	1571	Open in IMG/M
3300005445\|Ga0070708_100587439	Not Available	1050	Open in IMG/M
3300005445\|Ga0070708_100717368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	941	Open in IMG/M
3300005610\|Ga0070763_10019955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2941	Open in IMG/M
3300005610\|Ga0070763_10047953	All Organisms → cellular organisms → Bacteria → Proteobacteria	2021	Open in IMG/M
3300005610\|Ga0070763_10264760	Not Available	936	Open in IMG/M
3300005712\|Ga0070764_10786046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	591	Open in IMG/M
3300005921\|Ga0070766_10083347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1865	Open in IMG/M
3300005952\|Ga0080026_10240165	Not Available	545	Open in IMG/M
3300005995\|Ga0066790_10133578	Not Available	1064	Open in IMG/M
3300006050\|Ga0075028_100077617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1654	Open in IMG/M
3300006050\|Ga0075028_100102217	All Organisms → cellular organisms → Bacteria → Proteobacteria	1464	Open in IMG/M
3300006050\|Ga0075028_100509263	Not Available	704	Open in IMG/M
3300006057\|Ga0075026_100862054	Not Available	554	Open in IMG/M
3300006163\|Ga0070715_11084013	Not Available	503	Open in IMG/M
3300006176\|Ga0070765_100387347	Not Available	1303	Open in IMG/M
3300006176\|Ga0070765_100598525	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300006176\|Ga0070765_100850026	Not Available	862	Open in IMG/M
3300007265\|Ga0099794_10119656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	1324	Open in IMG/M
3300009088\|Ga0099830_11388943	Not Available	584	Open in IMG/M
3300009089\|Ga0099828_10522707	Not Available	1070	Open in IMG/M
3300009143\|Ga0099792_10230809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1068	Open in IMG/M
3300009650\|Ga0105857_1135628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	681	Open in IMG/M
3300009650\|Ga0105857_1226831	Not Available	551	Open in IMG/M
3300009660\|Ga0105854_1159470	Not Available	732	Open in IMG/M
3300009660\|Ga0105854_1360982	Not Available	521	Open in IMG/M
3300010159\|Ga0099796_10495851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300011270\|Ga0137391_10066840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3083	Open in IMG/M
3300011271\|Ga0137393_11348530	Not Available	602	Open in IMG/M
3300012096\|Ga0137389_11755071	Not Available	516	Open in IMG/M
3300012203\|Ga0137399_10823461	Not Available	782	Open in IMG/M
3300012205\|Ga0137362_11455620	Not Available	571	Open in IMG/M
3300012209\|Ga0137379_11599912	Not Available	550	Open in IMG/M
3300012363\|Ga0137390_10136809	All Organisms → cellular organisms → Bacteria → Proteobacteria	2430	Open in IMG/M
3300012363\|Ga0137390_11369523	Not Available	652	Open in IMG/M
3300012683\|Ga0137398_10737124	Not Available	686	Open in IMG/M
3300012924\|Ga0137413_10030739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2944	Open in IMG/M
3300012925\|Ga0137419_10919027	Not Available	721	Open in IMG/M
3300012944\|Ga0137410_10428886	Not Available	1070	Open in IMG/M
3300012944\|Ga0137410_10644740	Not Available	879	Open in IMG/M
3300015241\|Ga0137418_10209933	All Organisms → cellular organisms → Bacteria → Proteobacteria	1677	Open in IMG/M
3300015242\|Ga0137412_10128976	Not Available	2047	Open in IMG/M
3300019877\|Ga0193722_1146912	Not Available	517	Open in IMG/M
3300019882\|Ga0193713_1092461	Not Available	846	Open in IMG/M
3300019887\|Ga0193729_1111146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella soli	1031	Open in IMG/M
3300019887\|Ga0193729_1260514	Not Available	541	Open in IMG/M
3300019889\|Ga0193743_1207024	Not Available	617	Open in IMG/M
3300020021\|Ga0193726_1080869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1498	Open in IMG/M
3300020021\|Ga0193726_1166924	Not Available	948	Open in IMG/M
3300020034\|Ga0193753_10191381	Not Available	945	Open in IMG/M
3300020034\|Ga0193753_10194063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	936	Open in IMG/M
3300020034\|Ga0193753_10238434	Not Available	814	Open in IMG/M
3300020034\|Ga0193753_10343136	Not Available	623	Open in IMG/M
3300020061\|Ga0193716_1051167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1925	Open in IMG/M
3300020199\|Ga0179592_10096964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1354	Open in IMG/M
3300020579\|Ga0210407_10003666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12362	Open in IMG/M
3300020581\|Ga0210399_10491935	Not Available	1020	Open in IMG/M
3300020582\|Ga0210395_10777179	Not Available	715	Open in IMG/M
3300020582\|Ga0210395_11101910	Not Available	586	Open in IMG/M
3300020583\|Ga0210401_10704711	Not Available	870	Open in IMG/M
3300021086\|Ga0179596_10708923	Not Available	509	Open in IMG/M
3300021088\|Ga0210404_10900221	Not Available	506	Open in IMG/M
3300021178\|Ga0210408_10152272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1832	Open in IMG/M
3300021180\|Ga0210396_11437252	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300021401\|Ga0210393_11405153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300021402\|Ga0210385_11302103	Not Available	557	Open in IMG/M
3300021404\|Ga0210389_10008462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7955	Open in IMG/M
3300021404\|Ga0210389_10199890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1559	Open in IMG/M
3300021404\|Ga0210389_11466363	Not Available	519	Open in IMG/M
3300021407\|Ga0210383_11137454	Not Available	658	Open in IMG/M
3300021420\|Ga0210394_11737833	Not Available	521	Open in IMG/M
3300021478\|Ga0210402_10372940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1324	Open in IMG/M
3300021478\|Ga0210402_10416168	Not Available	1248	Open in IMG/M
3300021478\|Ga0210402_10737158	Not Available	909	Open in IMG/M
3300021478\|Ga0210402_10739442	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300021478\|Ga0210402_10799792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300021559\|Ga0210409_10124770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2366	Open in IMG/M
3300022756\|Ga0222622_10039602	Not Available	2585	Open in IMG/M
3300022756\|Ga0222622_10871736	Not Available	659	Open in IMG/M
3300025910\|Ga0207684_10507064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300025922\|Ga0207646_10357406	Not Available	1320	Open in IMG/M
3300026481\|Ga0257155_1069739	Not Available	565	Open in IMG/M
3300026551\|Ga0209648_10078981	All Organisms → cellular organisms → Bacteria → Proteobacteria	2751	Open in IMG/M
3300026551\|Ga0209648_10202451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1514	Open in IMG/M
3300026557\|Ga0179587_10148574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1459	Open in IMG/M
3300026557\|Ga0179587_10155801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1426	Open in IMG/M
3300027164\|Ga0208994_1057377	Not Available	583	Open in IMG/M
3300027480\|Ga0208993_1037978	Not Available	861	Open in IMG/M
3300027546\|Ga0208984_1010626	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300027633\|Ga0208988_1040766	Not Available	1193	Open in IMG/M
3300027633\|Ga0208988_1071556	Not Available	873	Open in IMG/M
3300027669\|Ga0208981_1008794	All Organisms → cellular organisms → Bacteria	2554	Open in IMG/M
3300027681\|Ga0208991_1043818	Not Available	1352	Open in IMG/M
3300027738\|Ga0208989_10007472	All Organisms → cellular organisms → Bacteria → Proteobacteria	3708	Open in IMG/M
3300027738\|Ga0208989_10060654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1303	Open in IMG/M
3300027855\|Ga0209693_10441267	Not Available	626	Open in IMG/M
3300027855\|Ga0209693_10543887	Not Available	552	Open in IMG/M
3300027879\|Ga0209169_10184203	Not Available	1090	Open in IMG/M
3300027889\|Ga0209380_10180801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1236	Open in IMG/M
3300027889\|Ga0209380_10778738	Not Available	544	Open in IMG/M
3300027894\|Ga0209068_10339390	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300027903\|Ga0209488_10190274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1547	Open in IMG/M
3300027908\|Ga0209006_10099767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2575	Open in IMG/M
3300028047\|Ga0209526_10212410	All Organisms → cellular organisms → Bacteria → Proteobacteria	1336	Open in IMG/M
3300028768\|Ga0307280_10284624	Not Available	600	Open in IMG/M
3300028819\|Ga0307296_10459667	Not Available	696	Open in IMG/M
3300028906\|Ga0308309_10026395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3913	Open in IMG/M
3300028906\|Ga0308309_10034044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3527	Open in IMG/M
3300031057\|Ga0170834_108555097	Not Available	571	Open in IMG/M
3300031446\|Ga0170820_13742751	Not Available	518	Open in IMG/M
3300031474\|Ga0170818_101915979	Not Available	544	Open in IMG/M
3300031474\|Ga0170818_109848364	Not Available	504	Open in IMG/M
3300031474\|Ga0170818_113886424	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	1074	Open in IMG/M
3300032174\|Ga0307470_10708742	Not Available	768	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.97%
Aquatic	Environmental → Aquatic	6.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.97%
Sediment	Environmental → Aquatic → Sediment	6.03%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.48%
Loam	Environmental → Terrestrial → Soil → Loam	29.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.17%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.03%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	12.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.07%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.31%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	4.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100103703	3300001661	Forest Soil	MPKTRDYVECRMKTASPKRRPSRRSPPKISPLEKSAVRIMRKLHEATGGQPQRWETLGNLGAVKSDAAAIAYAVERAWLLISGGLHSLSLTEDGRQRLK*
JGI12053J15887_100113987	3300001661	Forest Soil	MPKSTPKRRSAPKISAVEKTAVRIMRKLHEATGGRPQRWESLDNLGAGNGDAAGIAYGVERRWLRISGRAHSVSLTAPHAGPKLSS*
JGI12053J15887_101001743	3300001661	Forest Soil	RSRRSPPKISAVEKTAVRIMRKLYEATGGQTQRWESLGNLGAVKADAVGIAYAVEMDWLIISGGRTRCASLRPAAA*
Ga0070708_1005874392	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPKSTAPKRRPAKISAVEKTAVRLMRKLYEATGGQPQRWESLGNLGAVRADAAGIAYAAERDWLIISGGLPSLSLTEAGRQRLK*
Ga0070708_1007173681	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTAEDASRPIVSRRSCRTSRRNPPKISAVEKTAVRIIRKLYEATGGQPQRWESLGNLGVVKADAVGIAYAIERDWLIISGGFHSVSLTDAGRRRVK*
Ga0070763_100199551	3300005610	Soil	PMPKSTAPKRRRSPPKISAVETTAVRIMRKVDEATGGQPQRWESLDNLAAAKADAAGIAYAVERNWLIISGGLHSVSLTEAGRQRLKAR*
Ga0070763_100479533	3300005610	Soil	MANMPRATRTKRASQIKKHRRPSPRSAPKTSAVEKTAVRISGKFYEATGGRPQRWESLGNLGVVNADAAGIAYAIERDWLVVSGGLHSVSLTEDGRRRVK*
Ga0070763_102647601	3300005610	Soil	EADCTPMANMPRATRTKRASQIKKRRRPSPRSAPKTSAVEKTAVRIMRKLHEATGGQPQRWEALGNLDAVKADAAGIAYAVERNWLIISGGLHSVTLTEDGRRRVK*
Ga0070764_107860462	3300005712	Soil	PMPKSTAPKRRSPPKISAVETTAVRIMRKLYDATGGRPQRWESLDNLAAAKADAAGIAYAVERNWLIISGGLHSVSLTEAGRQRLKAR*
Ga0070766_100833473	3300005921	Soil	GGRRSLILARQIWIVQAKKTASPNRRRSPPKISAVEKTAVRIMGKLYEATGNQPQRWESLGNLGAVKADAAGIAYAVEKDWRIISGGLHSVSLTEDGRRRVKSR*
Ga0080026_102401652	3300005952	Permafrost Soil	MASETMPKPTAPKRRRSPTRVSTVEKTAVRIMRKLYEATGGQPQRWESLDNLGVVKADAAGIAYAVERDWLIISGGLHSVSLTEAGRQRLKAR*
Ga0066790_101335782	3300005995	Soil	MPKSTAPKRRRSPPKISTLENAALRIMRKLYEATGGQPQRWESLDNLGVVKADATGIAYAIERDWLIISGGLHLLSLTEAGRRRVK*
Ga0075028_1000776171	3300006050	Watersheds	ISAVEKTAVRIMRKLYAATGGQPQRWESLGNLGAVKADAAGIAYAVERDWLIISGGLHSVSLTEAGRALGYRRTGQDSIL*
Ga0075028_1001022171	3300006050	Watersheds	GYVECRMKTASPKRRRRQRSPPEISAVEKTAVRIMRKLYEATGGQPQRWESLGNLGAVQADAAAIAYAVEQGWLVISGGFHSLSLTEDGRQRLK*
Ga0075028_1005092632	3300006050	Watersheds	MPKSTVPKRRNPPKTSALEEAAVRIMRKLHEATGGQPQRWESLGNLGAVKADAAGIAYAVERNWLIISGGLHSVSLTEDGRHRVAT*
Ga0075026_1008620541	3300006057	Watersheds	MPKSTAPKRRRTPPKISALEKSALRIMRNLYEATGGKPQRWESLDNLGAVKADAAGIAYAIERDWLTISGGSLHSVSLTEEGRRRLKAR*
Ga0070715_110840131	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	GVAPKLRQRPPKISAVEKATVRIMRKVYEATGGQPQRWESLGNLGAVKADAAGIAYAVERGWLRISGGLHSVSLTADGRQRLK*
Ga0070765_1003873473	3300006176	Soil	MPKSTAPKRRSSRRSPPKIGGLEKAAVRIMRKLYEATGGQPQRWESLGNLGVVKADAAAIAYAIERDWLIISGGLHSVTLTEAGSAG*
Ga0070765_1005985253	3300006176	Soil	PVLRPTSVSSAASWLHEADCTPMANMPRATRTKRASQIKKRRRPSPRSAPKTSAVEKTAVRIMRKLHEATGGQPQRWEALGNLDAVKADAAGIAYAVERNWLIISGGLHSVTLTEDGRRRVK*
Ga0070765_1008500262	3300006176	Soil	ANMPRATRTKRASQIKKHRRPSPRSAPKTSAVEKTAVRISGKFYEATGGRPQRWESLGNLGVVNADAAGIAYAIERDWLVVSGGLHSVSLTEDGRRRVK*
Ga0099794_101196563	3300007265	Vadose Zone Soil	MKTASPKRRASRRSPPKISAVEKTAVRIMRKLYEATGGQPQRWESLGNLGAVKADAAGIGYAVERDCLIISGGLHSVSLTEAGRRRLAADRSRP*
Ga0099830_113889431	3300009088	Vadose Zone Soil	MPKSTAPKHRTSRRSPPKISAVEKTAVRIIRKLYEATGGQPQRWESLGNLGAGKADAAGIAYAVERDWLVISGGLHSLSLTEAGRQRLKAR*
Ga0099828_105227072	3300009089	Vadose Zone Soil	MKTASPKRRRSRRNPPKISAVEKTAVRIMRKLYEATGGQPQRWESLGNLGATKADAAGIAYAVERDWLIISGGLHSVSLTEARPPAVEVAASP*
Ga0099792_102308091	3300009143	Vadose Zone Soil	KRRRSRRSPPKISALEKTAVRIMRKLYEATGGQPQRWESLGNLGTVASDAASIAYAVERGWLIISGGLHSVSLTEAGRRRVKARWP*
Ga0105857_11356282	3300009650	Permafrost Soil	MPKSTAPKRRSSRRSPPKISALEKAAVRIMRELYEATGGQPQRWESLGNLGAAKSDAAAITYAVERGWLLISGGLHSVSLTEAGRRRVESR*
Ga0105857_12268311	3300009650	Permafrost Soil	MPKSTAPKRRRSPPKISTLENAALRIMRKLYEATGGQPQRWESLDNLGVVKADAAGIAYAIERDWLIISDGLHSVSLTEARSAPGGITLDNAENIQGRE*
Ga0105854_11594701	3300009660	Permafrost Soil	PRYVCTRIANMPKSTAPKRRRRLPEISAVEKTALRIMRKLHEATGGKPQRWESLGNLGALASDAAGIAYAVERDWLIISGGLHSVSLTEAGRRRLKVR*
Ga0105854_13609821	3300009660	Permafrost Soil	KTRGYVECRMKTASPKRRSSRRRPPKISAVEKAAVRIMRKLYEATGGQPQRWESLGNLGAAKSDAAAITYAVERGWLLISGGLHSVSLTEAGRQRLKGR*
Ga0099796_104958511	3300010159	Vadose Zone Soil	RSAPKISAIEKTAVRIMRQLYEAPGGQPQRWESLGNLGTVASDAAGIAYAVEMEWLIISGGLHSVSLTEAGRRRLK*
Ga0137391_100668401	3300011270	Vadose Zone Soil	PPKISAVEKTAVRIMRKLYEATGGQPQRWESLGNLGTVASDAAGIAYAVERDWLIISGGLHSVSLTKAGRRRVKARWP*
Ga0137393_113485301	3300011271	Vadose Zone Soil	MVVSPKRRRSRRSPPKISAVAKTAVRIMRKLYEATGGKPQRWESLGNLGAVASDAAGIAYAIERDWLIISGGLHSVSLTEDGRRRLKSR*
Ga0137389_117550711	3300012096	Vadose Zone Soil	MPKSTAPKRRPSPPKIGALEKSAVRIMRKLHEATGGQPQRWEPLGNLGTVEADAAGIAYAVERDWLMISSGAHSVSLTEAGHQRLK*
Ga0137399_108234611	3300012203	Vadose Zone Soil	MKTASPKRRRSRRSPPKISAIEKTAIRIMRKLYEATGGQPQRWESLGNLGTVASDAAGIAYAVERGWLIISGGLHSVSLTEAGRRL
Ga0137362_114556201	3300012205	Vadose Zone Soil	MVVSPKRRRSQRSPPKISAVEKTAVRIMRKLYEATGGQPQRWESLGNLGAVKADAVGIAYAVEMDWLIISAGFHSVSLTEAGRRRLGIALAKWKPEQAQ*
Ga0137379_115999121	3300012209	Vadose Zone Soil	RSPPKISALEKLAVRIMRNLYEATGGKPQRWESLDNLGAVKADAAGIAYAIERDWLIISGSSLHSVSLTEAGRRRVKSR*
Ga0137390_101368091	3300012363	Vadose Zone Soil	MKTASPKRRRSRRSPPKISALEKAAVRIMRKLYEATGGQPQRWESLGNLGAVKSDAGGIAYAVEMDWLIISGGFHSVSLTDAGRRRVKQPPRGGNAQLPER*
Ga0137390_113695232	3300012363	Vadose Zone Soil	MKTASPKRRRSPPKISAVEKTAVRIMRKLYEATGGQPQRWGSLGNLGTVEADAAGVAYAVERNWLIISGGLH*
Ga0137398_107371241	3300012683	Vadose Zone Soil	MKTASPKRRASRRSPPKISAVEKTAVRIMRKLYEATGGQPQRWESLGNLGAVKADAVGIAYAVEMDWLLISDGFHSVNLTDAGRRRLESR*
Ga0137413_100307395	3300012924	Vadose Zone Soil	MVVSPKRRRRPPRISAVEKTVVRIMRKLYEATGGQPQRWESLGNLGTVASDAAGIAYAVERDWRIISGGLHSVSLTEAGRRRVKARWP*
Ga0137419_109190273	3300012925	Vadose Zone Soil	CAFSLKAPMPKSTPKRRSAPKISAVEKTAVRIMRKLHEATGGRPQRWESLDNLGAGKGDAAGIAYGVERRWLRISGGAHSVSLTAPHAGPKLSS*
Ga0137410_104288862	3300012944	Vadose Zone Soil	GSAWPSLYAARLYPESLMPKSTAPKRRRSPPKISAVETRALRIMRILYEATGGRAQRWESLGNLGAVKADAPGIAYAVERGWLRISGGLHSLSLTEDGRQRLE*
Ga0137410_106447403	3300012944	Vadose Zone Soil	MPKSTAPKRRRSPPKISALEKTALRIMRKLYEATGGQPQRWESLDNLGAVKADAAGVAYAVERDWLIISGGFHSVSLTEAGRRRVK*
Ga0137418_102099333	3300015241	Vadose Zone Soil	MKTASPKRRRSRRSPPRISAIEKTAIRIMRKLYEATGGQPQRWESLGNLGTVASDAAGIAYAVERGWLIISGGLHSVSLTEAGRRRLAT*
Ga0137412_101289763	3300015242	Vadose Zone Soil	MPKSTAPKRRRSPAKISALEKSAVRIMRKLYEATGGLPQRWESLGNLGAVKSDAPGIAYAVERGWLRISGGLHSLGLTEGGRQRLK*
Ga0193722_11469121	3300019877	Soil	APMPRATLTKRASQIEKQGRRSSRRSALKISALEKTAVRIMRKFYEATGGQPQRWKSLGNLGAVKADASGIAYAVEQDWLPISGGLHSVSLTEDGRRRLE
Ga0193713_10924613	3300019882	Soil	MPKSTVPKRRRSPPKISAVEKTAVRIMLKLYEATSGQPQRWESLGNLGTVTADAAGIAYAVEKGWLTISGGLHSVSLTEAGRQRLK
Ga0193729_11111461	3300019887	Soil	LSQDENCFTEAPKKPKSAKISAVEKTVVRIMRKLYEATGGQPQRWESLGNLGVVKADAVGIAYAVEMDWLIISGRFHSVSLTEAGR
Ga0193729_12605141	3300019887	Soil	MKRTHPKVVVEKAAVRIKRKLHEATGGRPQRWESLGNLGAVKADAAGIGYAVERGWLRISGGLHSLSLTADGRQRLK
Ga0193743_12070241	3300019889	Soil	SMPKSIPKSRKSRRSPPKISAVEKIAVCIMRKLYEATGGQPQQWGSLGNLGAANADAANNAYSVERDWLIVSGGRTR
Ga0193726_10808694	3300020021	Soil	MPKSTPKRRSSRRSPPKIGALEKAAVRIMRKLYEATGGQSQRWESLDNLGAGIGDAAGIAYGVERGWLRISGGAHSVSLTEAGRQRLK
Ga0193726_11669242	3300020021	Soil	MPKSTAPKRSRRRPPKIGALEKAAIRIMRKLYEATGGRPQRWESLDNLGAVKADAAGIAYAIERDWLIVISGSLHSVSLTEAGRRRVKATKLKLKDAKNRSKRA
Ga0193753_101913812	3300020034	Soil	MPKSTAPKRSRRSTPKISAVEKAAVRIMRKLHEATGGRPQRWESLGDLGAVEADAAGIAYAVEQGWLKISGGLHSLSLTDAGRQRLK
Ga0193753_101940633	3300020034	Soil	MPRATQTKGSRRSPPKISAVEKTAVRIMRKLHEATGGQPQRWESLGNLGTVAADVVGIAYAVEREWLIISGGLHSVSLTEAGRRRLK
Ga0193753_102384341	3300020034	Soil	RCAFSPKAPMPKSTPKRRSSRRSPPKIGALEKAAVRIMRKLYEATGGQSQRWESLDNLGAGIGDAAGIAYGVERGWLRISGGAHSVSLTEAGRQRLK
Ga0193753_103431361	3300020034	Soil	MSDVRLCYAFPPIAPTSKRTSPKSRRSPPKIGALEKAAIRIMRKLYEATGGRPQRWESLDNLGAVKADAAGIAYAIERDWLIIISGSLHSVSLTEVGRRRVKATKLKLKDAKNRSKRT
Ga0193716_10511674	3300020061	Soil	KRRSSRRSPPKIGALEKAAVRIMRKLYEATGGQSQRWESLDNLGAGIGDAAGIAYGVERGWLRISGGAHSVSLTEAGRQRLK
Ga0179592_100969641	3300020199	Vadose Zone Soil	VRQLGMVVSPKRRRRPPRISAVEKTAVRIMRKLYEATGGQPQRWESLGNLGTVASDAAGIAYTVERDWLIISGGLHSVSLTEAGRRRVKARWP
Ga0210407_1000366614	3300020579	Soil	MKTASPKRRSSRRSAPKISAVEKTAIRIMHKLYEATGGQQQRWEFLGNLGAIEADAAGIAYAIERNWLIISGGLRSLHAGAVH
Ga0210399_104919351	3300020581	Soil	GCRMKTASPKRRSRRSPPKISALEKSALRIMRKLYAATGGKPQRWESLDNLGAVKADAGGIAYAIERDWLIISSGSLHSVSLTETGRQRLKSR
Ga0210395_107771791	3300020582	Soil	TPKRRRTPPKISALEKAALRIMRNLYEATGGKPQRWESLDNLGAVKADAGGIAYAIERDWLIISGGSLHSVSLTEDGRRRLKAR
Ga0210395_111019101	3300020582	Soil	TPIANMRKSTAPKRRRSPLKISAVEKTAVRIMRKLYEATGGKPQRWESLDNLGAVKADAAGIAYAIERDWLIISGGSLHSVSLTEAGRQRLKAR
Ga0210401_107047111	3300020583	Soil	GRRRGRRSPPKTSALEKSAVRIMRKLYEATGGRPQRWESLGNLGVVASDAAGIAYAIDKDWLIISGGLHSVTLTEAGRQRLK
Ga0179596_107089231	3300021086	Vadose Zone Soil	MKTASPKRRRSPPKISAVEKTAVRIMRKLYEATGGQPQRWESLGNLGTVEADAAGVAYAVERNWLIISGGLH
Ga0210404_109002211	3300021088	Soil	AGYTRPRCSSSLIAPMPESTAPKRRRSRQSPPKISAVEKAAVRIMRKLYEATGGLPQRWESLGNLGVVASDAAGIAYAVKKGWLIISGGLHSVSLTEDGRQRLKSR
Ga0210408_101522725	3300021178	Soil	KRASQIKKRRRPSPRSAPKTSAVEKTAVRIMRKLHEATGGQPERWEALGNLDAVKADAAGIAYAVERNWLIISGGCTR
Ga0210396_114372521	3300021180	Soil	PKSTAPKRRRSRRSAPKISAYEKAAVRIMRKLYEATGGKPQRWESLGNLGATKADAAGIAYAIERDWLIIISGGLHSVSLTEDGRQRVK
Ga0210393_114051531	3300021401	Soil	HCRSLIAPMPKSTAPKRRSSRRSPPKIGGLEKAAVRIMRKLYEATGGQPERWESLDNLGAVKADAAAIAYAAERDWLVISGGAHSVRLTEDGRRRVK
Ga0210385_113021031	3300021402	Soil	MPKSTAPKRRSSRRSPPKIGGLEKAAVRIMRKLYEATGGQPQRWESLGNLGVVKADAAAIAYAIERDWLIISGGLHSVTLTEAGSAG
Ga0210389_100084622	3300021404	Soil	MPKNTAPKRRRTPPKISALEKSAVRIMRKLHEATGGKPQRWESLDNLGAVKADAAGIAYAIERDWLIISGGSLHSVSLTEAGRRRVK
Ga0210389_101998901	3300021404	Soil	IAPMPKSTAPKRRSSRRSPPKIGGLEKAAVRIMRKLYEATGGQPQRWESLGNLGVVKADAAAIAYAIERDWLIISGGLHSVTLTEAGSAG
Ga0210389_114663632	3300021404	Soil	CRMKTASPKRRKNRRSAPKISALEKSALRIMRKLYTATDGKPQRWESLDNLGAVKADAAGIAYAIERDWLVISGGSLHSVSLTEAGRQRWKSH
Ga0210383_111374541	3300021407	Soil	MPRAIRTKRSRRSPPKISALEKSALRIMRNLYEATGGKPQRWESLDNLGAVKADAAGIAYAIERDWLIISGGSLHSVSLTEDGRQRLKATKPKPQKN
Ga0210394_117378331	3300021420	Soil	RTPPKISALEMAALRIMRNLYEATGGKPQRWESLDNLGAVKADAAGIAYAIERDWLVISVGSLHSVSLTEAGRERLKAARAR
Ga0210402_103729401	3300021478	Soil	TPPKISALEKSALRFMRKLYEATGGQPQRWESLDNLSAVKADAAGIAYAIERDWLIISGGSLHSVSLTEDGRQRLKSR
Ga0210402_104161683	3300021478	Soil	MPKGTAPKRRRSPPKISAVEKAALRIMHNLYEATGSKPQREESLDNLGAVKTDAAGIAYAIERDWLIISGGSLHSVSLTDDGRRQLKSR
Ga0210402_107371582	3300021478	Soil	NTKRRAPKVSALERSAVRIMRKLYAATGGKPQRWESLDNLGAVKADAAGIAYAIERDWLIISGGSLHSVSLTEDGRQRLKATKPKPQKN
Ga0210402_107394421	3300021478	Soil	MKTASPKRRRIQRSPPKISAVEKMAVRIMRKLYEATGGKPQRWESLGNLGVVNADVAGIAYAVEKGRVIISGGLHSISLTEDGRQRVKVR
Ga0210402_107997923	3300021478	Soil	MPKNTAPKRRRTPPKISALEKSAVRIMRKLYEATGGNPLRWESLDNLGAVKADAAGIAYAIERDWLVISGGLHSVSLTEVGRQRLKLR
Ga0210409_101247701	3300021559	Soil	LPKTRGYVGCRMKTASPKRRSRRSPPKISALEKSALRIMHKLYAATGGKPQRWESLDNLGAVKADAAGIAYAIERDWLIISGGSLHSVSLTETGRQRLKSR
Ga0222622_100396026	3300022756	Groundwater Sediment	MKAASPKRRRSPPKISALEKAAIGIMRKVSEATGGQPQQWESLDNQGMVAADAAGIAYAVERGWLIISGGFHSVSLTEAGRQRLK
Ga0222622_108717362	3300022756	Groundwater Sediment	MPKNTAPKKSPKISALEKAAIRIMRKVYEATGGQPQRWESLGNLGTVAADAAGIAYAVERDWLIISGGFHSVSLTEAGRQRLE
Ga0207684_105070641	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTAEDASRPIVSRRSCRTSRRNSPKISAVEKTAVRIIRKLYEATGGQPQRWESLGNLGVVKADAVGIAYAIERDWLIISGGFHSVSLTDAGRRRVK
Ga0207646_103574063	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPKSTAPKRRPAKISAVEKTAVRLMRKLYEATGGQPQRWESLGNLGAVRADAAGIAYAAERDWLIISGGLPSLSLTEAGRQRLK
Ga0257155_10697392	3300026481	Soil	MRPRYDCTPIANMPKRTAPKRRTSRRRPQKISAVEKTAVRIMRKLYEATGGQPQRWESLGNLGAGEADAAGIAYAVERGWLIISGGLHSVSLTEAGRRRVK
Ga0209648_100789813	3300026551	Grasslands Soil	MKTASPKRRRSRRSPPKISTVEKTAVRIMRKLYEATGGQPQRWESLGNLGAVKADAAGIAYAIERDWLIISGGLHSVSLTEAGRQRLKVR
Ga0209648_102024512	3300026551	Grasslands Soil	MKTASPKRRSSRRSAPKISAVEKTAIRIMRKLYEATGGQQQRWESLGNLRAIEADAAGIAYAIERNWFIISGGLRSLHAGAVH
Ga0179587_101485743	3300026557	Vadose Zone Soil	MPKSTAPKRRRSPPKISVVEKAAVRIMLKLYEATDGQPQRWESLGNLDAVKADAAGIVYAVERGWLRISGGSHSLSLTEAGRQRLK
Ga0179587_101558011	3300026557	Vadose Zone Soil	AVRQLGMVVSPKRRRRPPRISAVEKTAVRIMRKLYEATGGQPQRWESLGNLGTVASDAAGIAYAVERDWRIISGGLHSVSLTEAGRRRVKARWP
Ga0208994_10573772	3300027164	Forest Soil	MPKSTPKRRSAPKISAVEKTAVRIMRKLYEATGGQPQRWESLGNLGVVKADAAAIAYAIERDWLIISGGLHSASLTEAGRRRVKSR
Ga0208993_10379783	3300027480	Forest Soil	SLYAARLYPESLMPKSTAPKRRRSRRSPPKISAVEKTAVRIMRKFYEATGGKPQRWESLGNLGAVKADAAGIAYAIERDWLIISGGLHSVSLTEAGRRQVK
Ga0208984_10106262	3300027546	Forest Soil	MPKSTPKRRSAPKISAVEKTAVRIMRKLHEATGGRPRRWESLDNLGAGKGDAAGIAYAVERDWLIISGGLHSVSLTEDVQR
Ga0208988_10407662	3300027633	Forest Soil	MPKSTPKRRSAPKISAVEKTAVRIMRKLHEATGGRPQRWESLDNLGAGKGDAAGIAYGVERRWLRISGRAHSVSLTAPHAGPKLSS
Ga0208988_10715561	3300027633	Forest Soil	MPKSTLKSRKSRRSPPKISAVEKIAVCIMRKLYEATGGQPQQWGSLGNLGAANADAANNAYSVERDWLIVSGGRTR
Ga0208981_10087942	3300027669	Forest Soil	MPKSTPKRRSAPKISAVEKTAVRIMRKLHEATGGRPQRWESLDNLGAGNGDAAGIAYGVERRWLRISGGAHSVSLTAPHAGPKLSS
Ga0208991_10438184	3300027681	Forest Soil	PKSTAPKRRRSRRSPPKISAVEKTAVRIMRKFYEATGGKPQRWESLGNLGAVKADAAGIAYAIERDWLIISGGLHSVSLTEAGRRQVK
Ga0208989_100074724	3300027738	Forest Soil	MKTASPKRRRSRRSQPKISAVEKTTVRIMRKLFDATGGQPQRWESLGNLVAAKADAVGIAYAVEMDWLIISGGFRSLSLTEAGRRRVE
Ga0208989_100606541	3300027738	Forest Soil	MPKARGDVECRMKTASPKRRPSRRSPPKISPLEKSAVRIMRKLHEATGGQPQRWETLGNLGAVKSDAAAIAYAVERAWLLISGGLHSLSLTEDGRQRLK
Ga0209693_104412671	3300027855	Soil	KRRRSQRSPPKISALEKTAVRIMRKLYEATGGQPQRWESLDNLGAVKADAAGIAYAIERDWLIISGGLHSVSLTEAGRRRVKSR
Ga0209693_105438871	3300027855	Soil	RTKRASQIKKHRRPSPRSAPKTSAVEKTAVRISGKFYEATGGRPQRWESLGNLGVVNADAAGIAYAIERDWLVVSGGLHSVSLTEDGRRRVK
Ga0209169_101842032	3300027879	Soil	MPKSTAPKRRSPPKISAVETTAVRIMRKLYDATGGRPQRWESLDNLAAAKADAAGIAYAVERNWLIISGGLHSVSLTEAGRQRLKAR
Ga0209380_101808013	3300027889	Soil	PMPKSTTPKRRRSRRSPPKISALEKSAVRIMRKLYEATGGNPQRWESLDNLGAVASDAAGIAYAIERDWLIISGGLHSVSLTEAGRRRVKSR
Ga0209380_107787381	3300027889	Soil	KHRRPSPRSAPKTSAVEKTAVRISGKFYEATGGRPQRWESLGNLGVVNADAAGIAYAIERDWLVVSGGLHSVSLTEDGRRRVK
Ga0209068_103393901	3300027894	Watersheds	VRSIRVARLSPIAPMPKSTAPKRRRPPKISALEKAAARIMRKLYEATGGQPQRWESLDNLGVVKADATGIAYAIERDWLIISGGSLHSVSLTEAGLRRVKSR
Ga0209488_101902742	3300027903	Vadose Zone Soil	MPKSTAPKRRRSPPKISALEKTALRIMRKLYEATGGQPQRWESLDNLGAVKADAAGVAYAVERDWLIISGGFHSVSLTEAGRRRVK
Ga0209006_100997674	3300027908	Forest Soil	MPKSTAPKRRSSRRSPPKIGGLEKAAVRIMRKLYEATGGQPERWESLDNLGAVKADAAAIAYAAERDWLVISGGAHSVRLTEDGRRRVK
Ga0209526_102124101	3300028047	Forest Soil	ACSLIAPMPKSAAPKRRTSRRSPPKISAAEKTAVRIMLKLYEATGGQPQRWESLGNLGVVKSDAAAVAYTVERGWLIVEGNPPHSICLTDAGRTLVDHR
Ga0307280_102846241	3300028768	Soil	MSKSKAPKRRSSRRSPPKISALDKAAIRIMRKVYGATGGQPQRWESLGNLGAVKADAVGIAYAVEMDWLIISGGFHSVSLTEAGRRRVK
Ga0307296_104596671	3300028819	Soil	PASPKRRRKISAVEKTAVRIMRKLYEASGGQPQRWESLGNLGKVKADAAGIAYAVERDWLIISGGLHSVSLTEAGRRRLK
Ga0308309_100263957	3300028906	Soil	TPMANMPRATRTKRASQIKKHRRPSPRSAPKTSAVEKTAVRISGKFYEATGGRPQRWESLGNLGVVNADAAGIAYAIERDWLVVSGGLHSVSLTEDGRRRVK
Ga0308309_100340448	3300028906	Soil	MPKSTAPKRRSPPKISAVETTAVRIMRKVDEATGGQPQRWESLDNLAAAKADAAGIAYAVERNWLIISGGLHSVSLTEAGRQRLKAR
Ga0170834_1085550972	3300031057	Forest Soil	MPKSTAPKRRRSPPKLSALEKSALRIMRNRYAATGGKPQRWESLDNLGAVKDDAAGIAYAIERDWLIISGGSLHSVSLTEAGRRRVKSR
Ga0170820_137427511	3300031446	Forest Soil	KRRRPSPRSAPKISAVEKTAVRIVRKLYEATRGQPQRWESLGNLGVVASNAAGIAYAVERGWLIISGGLHSVSLTEAGRRRVK
Ga0170818_1019159791	3300031474	Forest Soil	MKTASPKRGSPPKISAVEKTAVRIMRKVYEATNGQPQRWESLGNLGVGKANAAAIAYAVERDWLIISGGWHSVSLTEAGRQRLRVVR
Ga0170818_1098483641	3300031474	Forest Soil	MTPPTLEIVLQGLHDLIAPMPRATLTKRASQIEKRGRPQQTTPPKGSALEKAALRIMRNLYEATGGKPQRWESLGNLGVVASDATGIAYAIESGWLTISGGLHSVSLTEDGRQRLKVR
Ga0170818_1138864241	3300031474	Forest Soil	RPPKISALEKAAVRIMRKVYGATGGQPQRWESLGNLGAAKADAGGIAYAVEREWLIISGGLHSVSLTEAGRQRLKSR
Ga0307470_107087423	3300032174	Hardwood Forest Soil	TCGYVDCRMKTASLKRRTSRRRPPKISAVEKTAIRIMRKLYEATGGQPQQWESLGNLGLVKADAAGIAYALERDWLIISGGLHSVSLTEAGRRRLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079239

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences