Metagenome Family F079250

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079250
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	75 residues
Representative Sequence	MNAARRTLGRWLLAALLERGCDPTTARLPRRVTSIRPLTAREMAELNPLTASLVPLSNLLPLPRPVRRPVYEV
Number of Associated Samples	97
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.45 %
% of genes near scaffold ends (potentially truncated)	21.55 %
% of genes from short scaffolds (< 2000 bps)	69.83 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.103 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.345 % of family members)
Environment Ontology (ENVO)	Unclassified (26.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.828 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 29.70% β-sheet: 0.00% Coil/Unstructured: 70.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF04012	PspA_IM30	9.48
PF00724	Oxidored_FMN	6.90
PF01047	MarR	5.17
PF12802	MarR_2	2.59
PF01593	Amino_oxidase	2.59
PF05977	MFS_3	1.72
PF03372	Exo_endo_phos	1.72
PF05990	DUF900	1.72
PF01663	Phosphodiest	1.72
PF13616	Rotamase_3	0.86
PF00578	AhpC-TSA	0.86
PF02080	TrkA_C	0.86
PF02540	NAD_synthase	0.86
PF00271	Helicase_C	0.86
PF05163	DinB	0.86
PF03176	MMPL	0.86
PF13581	HATPase_c_2	0.86
PF00005	ABC_tran	0.86
PF01467	CTP_transf_like	0.86
PF00144	Beta-lactamase	0.86
PF09265	Cytokin-bind	0.86
PF13551	HTH_29	0.86
PF13614	AAA_31	0.86
PF03965	Penicillinase_R	0.86
PF07043	DUF1328	0.86
PF00348	polyprenyl_synt	0.86
PF00069	Pkinase	0.86
PF08240	ADH_N	0.86
PF02861	Clp_N	0.86
PF01137	RTC	0.86
PF05685	Uma2	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1842	Phage shock protein A	Transcription [K]	18.97
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	6.90
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	6.90
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.45
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	1.72
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	1.72
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	0.86
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.86
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.86
COG0430	RNA 3'-terminal phosphate cyclase	RNA processing and modification [A]	0.86
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.86
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.86
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.86
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.86
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.86
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.86
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.86
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.86
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.86
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.10 %
Unclassified	root	N/A	6.03 %
Polyangium	genus	Polyangium	0.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.10 %
Unclassified	root	N/A	6.03 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.10 %
Unclassified	root	N/A	6.03 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.48 %
Unclassified	root	N/A	6.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	55.17 %
Unclassified	root	N/A	6.03 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.86 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.17 %
Unclassified	root	N/A	6.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.17 %
Unclassified	root	N/A	6.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.17 %
Unclassified	root	N/A	6.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.17 %
Unclassified	root	N/A	6.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.17 %
Unclassified	root	N/A	6.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	55.17 %
Unclassified	root	N/A	6.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Streptomyces sp. S4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. S4	0.86 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.86 %
Polyangium aurulentum	species	Polyangium → Polyangium aurulentum	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003320\|rootH2_10069079	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300003323\|rootH1_10284556	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300004081\|Ga0063454_100674037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300004081\|Ga0063454_100824857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300004479\|Ga0062595_100906143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300005186\|Ga0066676_11102024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300005328\|Ga0070676_10337771	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300005330\|Ga0070690_100308483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1137	Open in IMG/M
3300005330\|Ga0070690_101210839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300005331\|Ga0070670_100869535	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300005332\|Ga0066388_104570258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300005332\|Ga0066388_105171854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300005335\|Ga0070666_10991628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300005335\|Ga0070666_11348766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300005337\|Ga0070682_100474280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300005337\|Ga0070682_101477652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005353\|Ga0070669_100000027	All Organisms → cellular organisms → Bacteria	166637	Open in IMG/M
3300005364\|Ga0070673_101690831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300005365\|Ga0070688_101018965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300005434\|Ga0070709_10431979	Not Available	989	Open in IMG/M
3300005441\|Ga0070700_101935818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300005456\|Ga0070678_100168764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1780	Open in IMG/M
3300005466\|Ga0070685_10265933	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300005466\|Ga0070685_10896342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. S4	660	Open in IMG/M
3300005534\|Ga0070735_10452340	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005544\|Ga0070686_100188157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1472	Open in IMG/M
3300005544\|Ga0070686_100662926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300005578\|Ga0068854_100042567	All Organisms → cellular organisms → Bacteria	3215	Open in IMG/M
3300005587\|Ga0066654_10016704	All Organisms → cellular organisms → Bacteria	2866	Open in IMG/M
3300005587\|Ga0066654_10092424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1444	Open in IMG/M
3300005587\|Ga0066654_10141983	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300005617\|Ga0068859_100422566	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300005843\|Ga0068860_100113552	All Organisms → cellular organisms → Bacteria	2590	Open in IMG/M
3300006028\|Ga0070717_11660861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300006034\|Ga0066656_10073484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2026	Open in IMG/M
3300006163\|Ga0070715_10753381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300006237\|Ga0097621_102413574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300006794\|Ga0066658_10134410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1229	Open in IMG/M
3300006800\|Ga0066660_11625242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300006852\|Ga0075433_10127971	All Organisms → cellular organisms → Bacteria → Acidobacteria	2256	Open in IMG/M
3300006854\|Ga0075425_101181515	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300006871\|Ga0075434_100005848	All Organisms → cellular organisms → Bacteria → Acidobacteria	11234	Open in IMG/M
3300006871\|Ga0075434_100044380	All Organisms → cellular organisms → Bacteria	4410	Open in IMG/M
3300006881\|Ga0068865_100176019	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300006903\|Ga0075426_10007270	All Organisms → cellular organisms → Bacteria → Proteobacteria	7907	Open in IMG/M
3300006903\|Ga0075426_10024202	All Organisms → cellular organisms → Bacteria	4343	Open in IMG/M
3300006904\|Ga0075424_100223058	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300009053\|Ga0105095_10885148	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300009162\|Ga0075423_10710805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1061	Open in IMG/M
3300009789\|Ga0126307_10117593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2114	Open in IMG/M
3300009840\|Ga0126313_10776647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300010036\|Ga0126305_10000337	All Organisms → cellular organisms → Bacteria → Acidobacteria	20651	Open in IMG/M
3300010036\|Ga0126305_10629678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300010038\|Ga0126315_10066159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2001	Open in IMG/M
3300010039\|Ga0126309_10057132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1887	Open in IMG/M
3300010042\|Ga0126314_10939308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300010044\|Ga0126310_11021699	Not Available	652	Open in IMG/M
3300010047\|Ga0126382_11087147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300010166\|Ga0126306_11173562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300010359\|Ga0126376_10055282	All Organisms → cellular organisms → Bacteria	2829	Open in IMG/M
3300010373\|Ga0134128_12147183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300010397\|Ga0134124_11494858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300010399\|Ga0134127_11914817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300010400\|Ga0134122_10121072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2096	Open in IMG/M
3300010400\|Ga0134122_10470494	Not Available	1129	Open in IMG/M
3300010401\|Ga0134121_10000476	All Organisms → cellular organisms → Bacteria	46678	Open in IMG/M
3300010401\|Ga0134121_10277292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1476	Open in IMG/M
3300010401\|Ga0134121_12858311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300010401\|Ga0134121_12870942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300012171\|Ga0137342_1066627	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300012174\|Ga0137338_1003018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2860	Open in IMG/M
3300012189\|Ga0137388_11317069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300012212\|Ga0150985_115686657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1352	Open in IMG/M
3300012212\|Ga0150985_122435954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300012469\|Ga0150984_121532153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1929	Open in IMG/M
3300012907\|Ga0157283_10045445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300012986\|Ga0164304_10722592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300012989\|Ga0164305_10271017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300013308\|Ga0157375_11275780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300015158\|Ga0167622_1000683	All Organisms → cellular organisms → Bacteria	15256	Open in IMG/M
3300018422\|Ga0190265_10000717	All Organisms → cellular organisms → Bacteria	22334	Open in IMG/M
3300018431\|Ga0066655_10022976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2933	Open in IMG/M
3300018432\|Ga0190275_10187799	Not Available	1943	Open in IMG/M
3300018465\|Ga0190269_10395385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300018466\|Ga0190268_11397450	Not Available	599	Open in IMG/M
3300018468\|Ga0066662_10044875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2767	Open in IMG/M
3300019767\|Ga0190267_11111375	Not Available	569	Open in IMG/M
3300020154\|Ga0196965_1002023	All Organisms → cellular organisms → Bacteria → Acidobacteria	7231	Open in IMG/M
3300021339\|Ga0193706_1000014	All Organisms → cellular organisms → Bacteria	315933	Open in IMG/M
3300021408\|Ga0193708_1078505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300022878\|Ga0247761_1081631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300023268\|Ga0247765_1003155	All Organisms → cellular organisms → Bacteria → Proteobacteria	5452	Open in IMG/M
3300023268\|Ga0247765_1003279	Polyangium → Polyangium aurulentum	5315	Open in IMG/M
3300023269\|Ga0247773_1255382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300025903\|Ga0207680_10338386	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300025923\|Ga0207681_10000016	All Organisms → cellular organisms → Bacteria	345352	Open in IMG/M
3300025925\|Ga0207650_11259190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300025938\|Ga0207704_10138620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1698	Open in IMG/M
3300025960\|Ga0207651_10489041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300025981\|Ga0207640_10203774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1501	Open in IMG/M
3300026118\|Ga0207675_102106445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300026121\|Ga0207683_10463589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300026308\|Ga0209265_1167812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300026325\|Ga0209152_10066773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1294	Open in IMG/M
3300027684\|Ga0209626_1000400	All Organisms → cellular organisms → Bacteria	9337	Open in IMG/M
3300028381\|Ga0268264_10757249	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300030606\|Ga0299906_10947883	Not Available	632	Open in IMG/M
3300031366\|Ga0307506_10000031	All Organisms → cellular organisms → Bacteria	64507	Open in IMG/M
3300031996\|Ga0308176_10218266	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300032074\|Ga0308173_10019173	All Organisms → cellular organisms → Bacteria	4540	Open in IMG/M
3300032174\|Ga0307470_10000263	All Organisms → cellular organisms → Bacteria	32962	Open in IMG/M
3300034026\|Ga0334946_023815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300034172\|Ga0334913_001300	All Organisms → cellular organisms → Bacteria → Acidobacteria	9696	Open in IMG/M
3300034268\|Ga0372943_0000105	All Organisms → cellular organisms → Bacteria	32982	Open in IMG/M
3300034268\|Ga0372943_0666460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300034402\|Ga0334960_000354	All Organisms → cellular organisms → Bacteria	20260	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.83%
Host-Associated	Host-Associated	30.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.24%
Plants	Host-Associated → Plants	30.17%
Aquatic	Environmental → Aquatic	2.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.34%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.45%
Sediment	Environmental → Aquatic → Sediment	1.72%
Rhizome	Host-Associated → Plants → Rhizome	1.72%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.41%
Loam	Environmental → Terrestrial → Soil → Loam	15.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.72%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.86%
Sand	Environmental → Terrestrial → Soil → Sand	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.45%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.34%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	7.76%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	6.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.45%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.59%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.72%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	1.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.86%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015158	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020154	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021408	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c1	Environmental	Open in IMG/M
3300022878	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L111-311C-4	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300023269	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L092-311B-6	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
rootH2_100690793	3300003320	Sugarcane Root And Bulk Soil	MNAARRTLGCWLLTAFLERGADPTRRRTPRPVFSIRPLSPGELAALNPFVLPLVELSNLRRLPRPAR*
rootH1_102845562	3300003323	Sugarcane Root And Bulk Soil	VNVARRTLGCWLLAAFLERGCDSTAMRLPRHVARIRYLSPQEMADLNPLAHSLVPLSNLLRMPRPRXSPGRGMNPPFR*
Ga0063454_1006740372	3300004081	Soil	MNAARRTLGRWVLAALLERGCDPTTARKPRRVFSVRTLDERELAALNPLIWPLVPVSNLLPLPRPVRRPVYEV*
Ga0063454_1008248571	3300004081	Soil	MNAARRTLGRWVLAALLERGCDPTTARLPRRVFSVRPLNAREMAELNPLVRSLVSVSNLLPLPRPVRRPVYEV*
Ga0062595_1009061431	3300004479	Soil	VNAARRTLGRWLLAAFLERGCDPTTARLPHRVFSVRPLTPREMAELNPLAESLVAVSNLLALPRAARRPVYEV*
Ga0066676_111020241	3300005186	Soil	MSAARRTLGRWILATLLERGCDPTTARVPRRVTSVRPLTTREMAELRPLIGPLISGGNLLPLPRQVRRPAYEV*
Ga0070676_103377712	3300005328	Miscanthus Rhizosphere	VNAARRTLGRWLLAAFLERGCDPSTRLPRRIQSVRPLSPREMAELNPLVHSLVPLSNLLRMPRPRRSLPTAAVL*
Ga0070690_1003084832	3300005330	Switchgrass Rhizosphere	VNAARRTLGRWLLAAFLERGCDPTTARVPRRVFAIRPLTPGEMAALNPFLAEALIPVSNLLPLPRPLIRINRRQVYEA*
Ga0070690_1012108391	3300005330	Switchgrass Rhizosphere	MNAARRTLGRWLLMTFLERGCDPTTARRPRRVHSIRPLTEREMSELNPLARMLVPVSNLRSLPRRARGRSYEV*
Ga0070670_1008695352	3300005331	Switchgrass Rhizosphere	MQGGGEVRIPTMNAARRTLGRWLLAALLERGCDPTTARLPRRVTSIRPLTARELAELNPLTSSLVPLSNLLPLPRPVRRPIYEV*
Ga0066388_1045702582	3300005332	Tropical Forest Soil	VNAARRTLGRWLFAAFLERGCDPATARRPRRVLAIRPLTPREMAELRPLAGSLVSLSNLVPLPRLRRR
Ga0066388_1051718542	3300005332	Tropical Forest Soil	VNHARRTLGRWLLTAFLERGCDPTTARRPRRVFSVRALDRRELAALRLAAPPMALLSNLIPLSPARLAHRRAG*
Ga0070666_109916281	3300005335	Switchgrass Rhizosphere	VNAARRTLGRWLLAAFLERGCDPATARVPRRVFSIRPLTPREMAEINPLAGSLVPLSNLVPLPLLSRRYAGAP*
Ga0070666_113487662	3300005335	Switchgrass Rhizosphere	AMNAARRTLGRWLLMTFLERGCDPTTARRPRRVHSIRPLTEREMSELNPLARMLVPVSNLRPLPRRARRRSYEV*
Ga0070682_1004742802	3300005337	Corn Rhizosphere	RIPTMNAARRTLGRWLLAALLERGCDPTTARLPRRVTSIRPLTAREMAELNPLTASLVPLSNLLPLPRPVRRPVYEV*
Ga0070682_1014776522	3300005337	Corn Rhizosphere	VRIPTMNAARRTLGRWLLAALLERGCDPYTARLPRRITSIRPLTAREMAELNPLTLSLVPLSNLLPLPRPVRRPVYEV*
Ga0070669_100000027148	3300005353	Switchgrass Rhizosphere	VNAARRTLGRWLLAAFLERGCDPATARVPRRVLSIRPLTPREMAELNPLWQSLVPVSNLLPWPRSISRPVYEV*
Ga0070673_1016908312	3300005364	Switchgrass Rhizosphere	GRWLLAAFLERGCDPTTARVPRRVFAIRPLTPGEMAALNPFLAEALIPVSNLLPLPRPLIRINRRPVYEV*
Ga0070688_1010189652	3300005365	Switchgrass Rhizosphere	MNAARRTLGRWLLAALLERGCDPTTARLPRRVTSIRPLTAREMAELNPLTASLVPLSNLLPLPRPVRRPVYEV*
Ga0070709_104319791	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VNATRRTLGCWLLAAFLERGCDPWEARLPRRVVRVRTLTRREMAEIDPFGPLRRSLVSTSNLLPFPRVLRRPQYEV*
Ga0070700_1019358181	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	RSDDKDPIGVRIPTMNAARRTLGRWLLAALLERDCDPTTARLPRRVTSIRPLTAREMAELNPLTLSLVPLSNLLPLPRPVRRPIYEV*
Ga0070678_1001687643	3300005456	Miscanthus Rhizosphere	VNVARRTLGCWLLAAFLERGCDSSAMRLPRHVARIRYLSPQEMAALNPLAHSLVPMSNLLRMPRLRHPRAAA*
Ga0070685_102659332	3300005466	Switchgrass Rhizosphere	MNAARRTLGRWLLAALLERGCDPTTTRLPRRVTSIRPLTAREMAELNPLTASLVSLSNLLPLPRPVRRPVYEV*
Ga0070685_108963421	3300005466	Switchgrass Rhizosphere	VNAARRTLGRWLLAAFLERGCDPTTARVPRRVLSIRPLTPREMAELNPLWQSLVPVSNLLPWPRSISRSVYEV*
Ga0070735_104523401	3300005534	Surface Soil	VNATRRTLGCWLLAAFLERGCDPGEARLPRRVVRVRTLTRREMAEIDPFGPWRPSFAATSNLLPFPRALRR
Ga0070686_1001881572	3300005544	Switchgrass Rhizosphere	VNAARRTLGRWLLAGFLERGCDPSTFRLPRRVQSVRPLTRRELAEINPLVHSLVPLNNLRRMPRTRRSAS*
Ga0070686_1006629262	3300005544	Switchgrass Rhizosphere	MNAARRTLGRWVLAALLERGCDPTTARVPRRVFSVRPLDARELAELNPLIWPLVPVSNLLPLPRPVRRPVYEV*
Ga0068854_1000425673	3300005578	Corn Rhizosphere	VNAARRTLGRWLLAAFLERGCDPATARVPRRVFSIRPLTAREMAEINPLAGSLVPLSNLVPLPLLSRRYAGAP*
Ga0066654_100167043	3300005587	Soil	MNAARRTLGRWVLAALLERGCDPTTARKPRRVFSVRTLDERELAALNPLVWPLVPVSNLLPLPRPVRRPVYEV*
Ga0066654_100924242	3300005587	Soil	MSAARRTLGRWILATLLERGCDPTTARVPRRVTSVRPLTTREMAELRPLIGPLISSGNLLPLPRHVRRPAYEV*
Ga0066654_101419831	3300005587	Soil	GSAEYNPSVNAARRTLGRWLLAAFLERGCDPQTARPQRRVLSIRPLTPREMAALNPLAGSLVPLSNLVPLPLLRRRYPGYASAP*
Ga0068859_1004225662	3300005617	Switchgrass Rhizosphere	VSAAARRTLGRWILAALLERGCDPTTVRKPRRVFSVRPLTPGEMAELNPFHAALVPLTNLRRMPLPRHPRPTYEV*
Ga0068860_1001135522	3300005843	Switchgrass Rhizosphere	MNAARRTLGRWVLAALLERGCDPTTARMPRRVFSVRPLDARELAELNPLIWPLVPVSNLLPLPRPVRRPVYEV*
Ga0070717_116608611	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	YRGDGGSARGVRIQPVNTARRTLGRWLLTAFLERGCDPATARLPRRVISVRPLNRREMAELVHPLTRSLVPLSNLLPLPRSVRRPHYEV*
Ga0066656_100734843	3300006034	Soil	VNAARRTLGRWLLAAFLERGCDPQTARPQRRVLSIRPLTPREMAALNPLAGSLVPLSNLVPLPLLRRRYPGYASAP*
Ga0070715_107533811	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VNAARRTLGRWLFSAFLERGCDPATVRRPRRVLAIRPLTPREMAELRPLAGSLVSLSNLLPLPRVRRRHAVVTRARLDTPGARP*
Ga0097621_1024135741	3300006237	Miscanthus Rhizosphere	MGEERYNPPVNAARRTLGRWVFAAFLERGCDPATDPAILRRPRWVLAIRPLTPREMAELSPLAGSLVSLSNLLPLPRVRRRHASVP*
Ga0066658_101344103	3300006794	Soil	VNAARRTLGRWLLAAFLERSCDPQTTARLSRRVLSIRPLTPREMAELNPLAGALVPVSNLLPLPLLRRRYEVVAP*
Ga0066660_116252422	3300006800	Soil	TLGRWLLAAFLERGCDPQTARPQRRVLSIRPLTPREMAELNPLAGSLVPLSNLVPLPLLRRRYPGYASAP*
Ga0075433_101279712	3300006852	Populus Rhizosphere	VNTARRTLGRWLLAAFLERGCDPTTARLPRRVLSIRPLTAREMAELNPLAKSLVAVSNLLPLPRPVRRAVYEV*
Ga0075425_1011815152	3300006854	Populus Rhizosphere	VNTARRTLGRWLLAAFLERGCDPTTARVPRRVFSIRPLTAREMAELNPLAESLVAVSNLLPLPRPVRRAAYEV*
Ga0075434_1000058484	3300006871	Populus Rhizosphere	LWLYNPPVNAARRTLGRWLFAAFLERGCDPTTVRRPRRVMVIRPLTPLEMAELSPLAGSLVSLSNLLPLPRLRLRSLRSAAVP*
Ga0075434_1000443803	3300006871	Populus Rhizosphere	VNTARRTLGRWLLAAFLERGCDPTTARLPRRVFSIRPLTAREMAELNPLADSLVAVSNLLPLPRPVRRAAYEV*
Ga0068865_1001760193	3300006881	Miscanthus Rhizosphere	MNAARRTLGRWVLADLLERGCESSARLPRRVFSVRPLSAREMAELNPLAGSLVPVSNLLWLPRPVRRPVYEV*
Ga0075426_100072708	3300006903	Populus Rhizosphere	VNAARRTLGCWLLAGFLERGCDSAHLRLPRRVQSVRPLTRREMAEINPLVHSLVPLTNLLRMPRTRRRAIPVPA*
Ga0075426_100242024	3300006903	Populus Rhizosphere	VNTARRTLGRWLLAAFLERGCDPTTARLPRRVFSIRPLTAREMAELNPLAESLVAASNLLPLPRPVRRAAYEV*
Ga0075424_1002230583	3300006904	Populus Rhizosphere	VNAARRTLGCWLLAGFLERGCDSAHMRLPRRVQSVRPLSPREMAEINPLAHSLVPLTNLLRMPRTRRRAFPVPA*
Ga0105095_108851481	3300009053	Freshwater Sediment	VNAARRTIGCWLLTAFLERGCEPAKRLPRRVVSVRPLTPREMAELNPLAASLVPLTNLRWLPFPRPPARRGICEV*
Ga0075423_107108052	3300009162	Populus Rhizosphere	RTLGRWLLAAFLERGCDPTTARLPRRVLSIRPLTAREMAELNPLAKSLVAVSNLLPLPRPVRRAVYEV*
Ga0126307_101175933	3300009789	Serpentine Soil	VNAARRTLGRWLLAAFLERGCDPATARVPRRVLSIRPLTPREMAELNPLAQSLVLVSNLVPLPRPVRRAAYEV*
Ga0126313_107766471	3300009840	Serpentine Soil	VNAARRTLGRWLLAAFLERGCDPATARVPRRVFSIRPLTPREMAELNPLAQSLVLVSNLVPLPRPVRRPAYEV*
Ga0126305_100003375	3300010036	Serpentine Soil	VNAARRTLGRWLLAAFLERGCDPATARVPRRVLSVRPLTRREMAELNPFSRPLVSVSNLLPLPRTVRRPVYEV*
Ga0126305_106296782	3300010036	Serpentine Soil	DQCLGGLPARGSRYNPPVNAARRTLGRWLLAAFLERGCDPTTARVPRRVLSIRPLTPREMAELNPLWQSLVPVSNLLPWPRPISRPVYEV*
Ga0126315_100661593	3300010038	Serpentine Soil	MPDQGRIPSVNAARRTLGRWLLAAFLERGCDPTTARVPRRVLSIRPLTPREMAELNPLAQSLVLVSNLVPLPRPVRRAAYEV*
Ga0126309_100571323	3300010039	Serpentine Soil	VNAARRTLGRWLLAAFLERGCDPATARVPRRVLSIRPLTPREMAELNPLAQSLVLVSNLVPLPRPVRRTAYEV*
Ga0126314_109393082	3300010042	Serpentine Soil	MDWMQGLCYRWGVLPFDDKAAEGVRIPTMNAARRTLGRWLLAALLERGCDPTTARLPRRVTSIRPLTAREMAELNPLTVSLVPLSNLLPLPRPVRRPIYEV*
Ga0126310_110216991	3300010044	Serpentine Soil	MAFLERGCEPKRRVPRQVVSIRPLSPEEMAELNPLAASLVPLTNLRFLPLPRLSRREVYEV*
Ga0126382_110871472	3300010047	Tropical Forest Soil	AAFLERGCDPTTARLPRRVFSIRPLTAREMAELNPLAESLVAVSNLLPLPRPARQPVYEV
Ga0126306_111735621	3300010166	Serpentine Soil	PDQGRIPSVNAARRTLGRWLLAAFLERGCDPATARVPRRVLSIRPLTPREMAELNPLAQSLVLVSNLVPLPRPVRRAAYEV*
Ga0126376_100552822	3300010359	Tropical Forest Soil	VNTARRTLGRWLLAAFLERGCDPTTARLPRRVFSIRPLTAREMAELNPLAESLVAVSNLLPLPRPARQPVYEV*
Ga0134128_121471831	3300010373	Terrestrial Soil	VNTARRTLGRWLLAAFLERGCDPSTARIPRRVTSVRPLTPREMAELNPLAESLIAVSNLLPLPRPVRRPAYEV*
Ga0134124_114948582	3300010397	Terrestrial Soil	VNAARRTLGRWLLAAFLERGCDPATARVPRRVFSIRPLTAREMAEINPLAGSLVSLSNLVPLPLLRRRYAGAP*
Ga0134127_119148172	3300010399	Terrestrial Soil	VNATRRTLGCWLLTAFLERGCDPFREARLPRRVVVRPLTRRELAEISPCGPLVATSNLLPFPRPVRRPVYEV*
Ga0134122_101210723	3300010400	Terrestrial Soil	MNTARRTLGRWLLAAFLERGCDPATARLPRRVTSVRPLTPREMAELNPLAESLIAVSNLLPLPRPVRRPAYEV*
Ga0134122_104704943	3300010400	Terrestrial Soil	VNAARRTLGRWLLAAFLERSCDPQTARLNRRVLSIRPLTPREMAELNPLAGALVPLSNLIPMPHLRRRHGIAP*
Ga0134121_1000047628	3300010401	Terrestrial Soil	VNAARRTLGRWLFAAFLERGCDPTTVRRPRRVMVIRPLTPLEMAELSPLAGSLVSLSNLLPLPRLHRRVP*
Ga0134121_102772922	3300010401	Terrestrial Soil	MMNRTQGAGQVTILPVNAARRTLGRWVFAAFLELGCDPSPSRRPRRVQAIRPLTPREMAELSPLAGSLVSLSNVLPLPRLRRRHASAP*
Ga0134121_128583111	3300010401	Terrestrial Soil	RGDTEYNPSVNAARRTLGRWVFAAFLERGCDPATVRRPRRVLAIRPLTPREMAELKPLAGSLVALSNLVPLPRLRRRRLDTPWARP*
Ga0134121_128709421	3300010401	Terrestrial Soil	RSGSGYNSPVNAARRTLGRWLLAGFLERGCDPAALRLPRRVQSVRPLTQRELAEINPLIHSLVPLTNLRRMPRLPENRRRLRPAS*
Ga0137342_10666272	3300012171	Soil	MNAAKRTLGCWLLSAFLEKGCGPTTRLPRRVVFMRSLSARELAELNPLVASLVPLSNLLPMPRLRRRDALSVSA*
Ga0137338_10030183	3300012174	Soil	VNTARRTLGRWLLTAFLERGCDPTTVRVPRRVFSIRPLTPREMAELNPLAESLVAVSNLLPLPRPVRRPVYEV*
Ga0137388_113170692	3300012189	Vadose Zone Soil	VNAARRTLGCWLFAAFLERGCDSTTLRRPRRVMVIRPLTPLEMAELSPLSGSLVSLSNLLPLPRLRLRSPRYAAVP*
Ga0150985_1156866571	3300012212	Avena Fatua Rhizosphere	MGEERYNPPVNAARRTLGRWVFAAFLERGCDPATVRRPRRVLAIRPLTPREMAELKPLAGSLVALSNLVPLPRLRRRRLDTPWARP*
Ga0150985_1224359541	3300012212	Avena Fatua Rhizosphere	LGRWVLAALLERGCDPTTARRPRRVFSVRTLDEHELAALNPLIWPLVPVSNLLPLPRPVRRPVYEV*
Ga0150984_1215321531	3300012469	Avena Fatua Rhizosphere	MGEERYNPPVNAARRTLGRWVFAAFLERGCDPATVRRPRRVLAIRPLTPREMAELKPLAGSLVALSNVVPLPRLRRRRLDTSWARP*
Ga0157283_100454452	3300012907	Soil	VNAARRTLGRWLLAAFLERGCDPTTARVPRRVFAIRPLTHREMSELNPFLLMVPVSNLLPLPRTLSRIRRRPVYEV*
Ga0164304_107225921	3300012986	Soil	MNAARRTLGRWLLAALLERGCDPTTVRLPRRVTSIRPLTAREMAELNPLVFSLVPLSNLLPLPRPVRRPVYEV*
Ga0164305_102710172	3300012989	Soil	VNAARRTLGRWLFAAFLERGCDPAPVRRQRRVLAIRPLTPREMAELSPLAGSLVSLSNLLPLPRVRRRHATVP*
Ga0157375_112757802	3300013308	Miscanthus Rhizosphere	VNAARRTLGRWLLAAFLERGCDPATARVPRRVFSIRPLTAREMAEINPLAGSLVPLSNLVPLPLLRRRYAGAP*
Ga0167622_10006836	3300015158	Glacier Forefield Soil	LLTAFLERGCDPATARLPRRVISVRPLSSREMAELIHPLTRSLVPVSNLLLLPRPVHRPHYEV*
Ga0190265_1000071712	3300018422	Soil	VNVARRTLGCWLLAAFLERGCETAPRLPRRVMSIRPLTPRELAELNPLAASLVSLSNLLPLPRQASRRPLYEV
Ga0066655_100229764	3300018431	Grasslands Soil	MNAARRTLGRWVLAALLERGCDPTTARKPRRVFSVRTLDERELAALNPLVWPLVPVSNLLPLPRPVRRPVYEV
Ga0190275_101877991	3300018432	Soil	MARMSAARRTLGRWLLATFLERGCDPTTARLPRRVFSVRPLTQEEAAAFNPLLHALVPLSNLRRLPTRR
Ga0190269_103953851	3300018465	Soil	MLRMSEARRTLGRWILTAFLERGCDPTTARVPRRVLSIRPLTPREMAELNPLTESLVPVSNLLPLPRRVRRAVYEV
Ga0190268_113974502	3300018466	Soil	WGEGLAPDRVTIPPVNAARRTLGSWLLMAFLERGCEPKRRIPRQVVSIRPLSPAEMAALNPLAASLVPLTNLRFLPFPRLSRREVYEV
Ga0066662_100448754	3300018468	Grasslands Soil	LSLLSLSPAFSAEYNPSVNAARRTLGRWLLAAFLERGCDPQTARPQRRVLSIRPLTPREMAELNPLAGSLVPLSNLVPLPLLRRRYPGYASAP
Ga0190267_111113751	3300019767	Soil	MAQGPDRVTIPPVNAARRTLGSWLLMAFLERGCEPKRRIPRQVVSIRPLSPEEMATLNPLAASLVPLTNLRFLPFPRLSRREVYEV
Ga0196965_10020239	3300020154	Soil	VSAARRTIGRWILAALLERGCDPTTARVPRRVFSIRPLTSREMAELNPLSSSLVPLSNLRRMRLPRNPNARPTYEV
Ga0193706_100001450	3300021339	Soil	MMDWRQEGGEVRIPTMNAARRTLGRWLLAALLERGCDPTTARLPRRVTSIRPLTAREMAELNPLTLSLVPLSNLLPLPRPVRRPVYEV
Ga0193708_10785052	3300021408	Soil	MDWRQEGGEVRIPTMNAARRTLGRWLLAALLERGCDPTTARLPRRVTSIRPLTAREMAELNPLTLSLVPLSNLLPLPRPVRRPVYEV
Ga0247761_10816312	3300022878	Plant Litter	MNAARRTLGRWLLAALLERGCDPTTARLPRRVTSIRPLTAREMAELNPLIASLVPLSNLLPLPRPVPPPHL
Ga0247765_10031552	3300023268	Plant Litter	MNAARRTLGRWLLAALLERGCDPTTARLPRRVTSIRPLTAREMAELNPLTASLVPLSNLLPLPRPVRRPIYEV
Ga0247765_10032793	3300023268	Plant Litter	VNVARRTLGCWLLAAFLERGCDSSAMRLPRHVARIRYLSPQEMAALNPLAHSLVPLSNLLRMPRPRPPRAVA
Ga0247773_12553821	3300023269	Plant Litter	MNAARRTLGRWLLAALLERGCDPTTARLPRRVTSIRPLTAREMAELNPLTASLVPLSNLLPLPRPVRRPVYEV
Ga0207680_103383863	3300025903	Switchgrass Rhizosphere	MNAARRTLGRWLLMTFLERGCDPTTARRPRRVHSIRPLTEREMSELNPLARMLVPVSNLRPLPRRARGRSYEV
Ga0207681_10000016165	3300025923	Switchgrass Rhizosphere	VNAARRTLGRWLLAAFLERGCDPATARVPRRVLSIRPLTPREMAELNPLWQSLVPVSNLLPWPRSISRPVYEV
Ga0207650_112591901	3300025925	Switchgrass Rhizosphere	QGGGEVRIPTMNAARRTLGRWLLAALLERGCDPTTARLPRRVTSIRPLTARELAELNPLTSSLVPLSNLLPLPRPVRRPIYEV
Ga0207704_101386202	3300025938	Miscanthus Rhizosphere	MNAARRTLGRWVLADLLERGCESSARLPRRVFSVRPLSAREMAELNPLAGSLVPVSNLLWLPRPVRRPVYEV
Ga0207651_104890411	3300025960	Switchgrass Rhizosphere	WLLAAFLERGCDPTTARVPRRVFAIRPLTPGEMAALNPFLAEALIPVSNLLPLPRPLIRINRRPVYEV
Ga0207640_102037742	3300025981	Corn Rhizosphere	VNAARRTLGRWLLAAFLERGCDPATARVPRRVFSIRPLTAREMAEINPLAGSLVPLSNLVPLPLLSRRYAGAP
Ga0207675_1021064452	3300026118	Switchgrass Rhizosphere	GSRVESPAMNAARRTLGRWVLAALLERGCDPTTARMPRRVFSVRPLGARELAELSPLIWPLVPVSNLLPLPRPVRRPVYEV
Ga0207683_104635892	3300026121	Miscanthus Rhizosphere	VNVARRTLGCWLLAAFLERGCDSSAMRLPRHVARIRYLSPQEMAALNPLAHSLVPMSNLLRMPRLRHPRAAA
Ga0209265_11678122	3300026308	Soil	RTLGRWLLAAFLERGCDPQTARPQRRVLSIRPLTPREMAELNPLAGSLVPLSNLVPLPLLRRRYPGYASAP
Ga0209152_100667732	3300026325	Soil	MNAARRTLGRWVLAALLERGCDPTTARKPRRVFSVRTLDERELAALNPLIWPLVPVSNLLPLPRPVRRPVYEV
Ga0209626_10004006	3300027684	Forest Soil	VNAARRTLGRWLLTTFLERGCDPTTVRVPRPIFSIRPLTAREMAELNPLAQSLVPLTNLRRLSRR
Ga0268264_107572492	3300028381	Switchgrass Rhizosphere	MNAARRTLGRWVLAALLERGCDPTTARMPRRVFSVRPLDARELAELNPLIWPLVPVSNLLPLPRPVRRPVYEV
Ga0299906_109478832	3300030606	Soil	MNAAKRTLGCWLLSAFLEKGCGPTTRLPRRVVSVRPLSARELAELNPLLASLVPLSNLLP
Ga0307506_100000318	3300031366	Soil	VNVARRTLGCWLLAAFLERGCDSSAMRLPRHVARIRYLSPQEMADLNPLAHSLVPLSNLLRMPRPRQPRAVA
Ga0308176_102182663	3300031996	Soil	MNAARRTLGRWVLAALLERGCDPTTARVPRRVFSVRPLDARELAELKSRVWPLVPVSNLLPLPRPVRRP
Ga0308173_100191733	3300032074	Soil	MNAARRTLGRWVLAALLERGCDPTTARMPRRVFSVRPLDARELAELKSRVWPLVPVSNLLPLPRPVRRPVYEV
Ga0307470_100002633	3300032174	Hardwood Forest Soil	MNAARRTLGCWLLTAFLERGCDPTTRRRPRPVFSFRPLTPRELAELNPFVLPLIELSNLRRLPRPAR
Ga0334946_023815_3_194	3300034026	Sub-Biocrust Soil	GRWLLAAFLERGCDPTTARVPRRVFAIRPLTQREMSELNPFLVVPVSNLLPLPRPVRRPVYEV
Ga0334913_001300_7189_7410	3300034172	Sub-Biocrust Soil	VNTARRTLGRWLLAAFLERGCDPATARLPRRVLSVRPLTPREMAELNPLAESLVPVSNLLPLPRPIRRPVYEV
Ga0372943_0000105_1795_2016	3300034268	Soil	VNATRRTLGRWLLTAFLERGCDPATARLPRRVTSVRPLTRREMAELNPGSRRLVPVSNLRALPRPIRRPVYEV
Ga0372943_0666460_37_267	3300034268	Soil	MNAARRTLGRWLLAAFLERGCDPQTARPQRRVLSIRPLTPREMAELNPLAGSLVPLSNLVPLPLLRRRYPGYASAP
Ga0334960_000354_19781_20002	3300034402	Sub-Biocrust Soil	VNAARRTLGRWLLAAFLERGCDPATARLPRRVLSIRPLTPREMAELNPLAESLVAVSNLLPLPRHIRRPVYEV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079250

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences