NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F079264

Metagenome / Metatranscriptome Family F079264

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F079264
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 88 residues
Representative Sequence YVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED
Number of Associated Samples 95
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.86 %
% of genes near scaffold ends (potentially truncated) 99.14 %
% of genes from short scaffolds (< 2000 bps) 81.90 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(29.310 % of family members)
Environment Ontology (ENVO) Unclassified
(50.862 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.621 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.91%    β-sheet: 45.45%    Coil/Unstructured: 38.64%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF03781FGE-sulfatase 1.72
PF13432TPR_16 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 1.72

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10109072All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300005166|Ga0066674_10321038All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium727Open in IMG/M
3300005167|Ga0066672_10545509All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium751Open in IMG/M
3300005172|Ga0066683_10504972All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium738Open in IMG/M
3300005172|Ga0066683_10712428All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium593Open in IMG/M
3300005174|Ga0066680_10297944All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300005177|Ga0066690_10303642All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1078Open in IMG/M
3300005180|Ga0066685_10675763All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium710Open in IMG/M
3300005186|Ga0066676_10758183All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium660Open in IMG/M
3300005435|Ga0070714_101098071All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium775Open in IMG/M
3300005447|Ga0066689_10111192All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1586Open in IMG/M
3300005447|Ga0066689_10236682All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300005467|Ga0070706_102095649All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium511Open in IMG/M
3300005471|Ga0070698_101496058All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium626Open in IMG/M
3300005536|Ga0070697_100778721All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium846Open in IMG/M
3300005536|Ga0070697_101133458All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium696Open in IMG/M
3300005536|Ga0070697_101677124All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium568Open in IMG/M
3300005557|Ga0066704_10788986All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium591Open in IMG/M
3300005559|Ga0066700_10056153All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2439Open in IMG/M
3300005559|Ga0066700_10354291All Organisms → cellular organisms → Bacteria1036Open in IMG/M
3300005561|Ga0066699_10347264All Organisms → cellular organisms → Bacteria1060Open in IMG/M
3300005568|Ga0066703_10732377All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium567Open in IMG/M
3300005568|Ga0066703_10778977All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium547Open in IMG/M
3300005587|Ga0066654_10181143All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300006163|Ga0070715_10378899All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300006755|Ga0079222_11578045All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium621Open in IMG/M
3300006794|Ga0066658_10024313All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2398Open in IMG/M
3300006796|Ga0066665_11257690All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium566Open in IMG/M
3300006797|Ga0066659_10520672All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium956Open in IMG/M
3300006797|Ga0066659_10575238All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium912Open in IMG/M
3300006797|Ga0066659_10830372All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium767Open in IMG/M
3300006797|Ga0066659_11431611All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium577Open in IMG/M
3300006804|Ga0079221_10030387All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2283Open in IMG/M
3300006804|Ga0079221_10710238All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium702Open in IMG/M
3300006806|Ga0079220_11086039All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium646Open in IMG/M
3300007265|Ga0099794_10242278All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300009012|Ga0066710_102875106All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium677Open in IMG/M
3300009038|Ga0099829_10148873All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1866Open in IMG/M
3300009089|Ga0099828_10105616All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2442Open in IMG/M
3300009090|Ga0099827_12005399All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium502Open in IMG/M
3300009137|Ga0066709_100222899All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2498Open in IMG/M
3300009137|Ga0066709_102480040All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium700Open in IMG/M
3300009143|Ga0099792_10206228All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300009147|Ga0114129_10028224All Organisms → cellular organisms → Bacteria7951Open in IMG/M
3300010301|Ga0134070_10163847All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium802Open in IMG/M
3300010323|Ga0134086_10042897All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1519Open in IMG/M
3300010329|Ga0134111_10457369All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium554Open in IMG/M
3300010335|Ga0134063_10382116All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium688Open in IMG/M
3300010401|Ga0134121_10955054All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300010401|Ga0134121_12437084All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium564Open in IMG/M
3300012096|Ga0137389_10106573All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2236Open in IMG/M
3300012198|Ga0137364_10478132All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium936Open in IMG/M
3300012199|Ga0137383_10074437All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2450Open in IMG/M
3300012200|Ga0137382_10584010All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium797Open in IMG/M
3300012201|Ga0137365_10154706All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1721Open in IMG/M
3300012202|Ga0137363_10028545All Organisms → cellular organisms → Bacteria3830Open in IMG/M
3300012203|Ga0137399_10918447All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium737Open in IMG/M
3300012210|Ga0137378_10571939All Organisms → cellular organisms → Bacteria1039Open in IMG/M
3300012285|Ga0137370_10045013All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2350Open in IMG/M
3300012349|Ga0137387_11113818All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium562Open in IMG/M
3300012356|Ga0137371_10092079All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2357Open in IMG/M
3300012357|Ga0137384_10406573All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1124Open in IMG/M
3300012361|Ga0137360_10555809All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium980Open in IMG/M
3300012403|Ga0134049_1035926All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium555Open in IMG/M
3300012407|Ga0134050_1406796All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium555Open in IMG/M
3300012582|Ga0137358_10150099All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1587Open in IMG/M
3300012917|Ga0137395_10732289All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium716Open in IMG/M
3300012918|Ga0137396_10027828All Organisms → cellular organisms → Bacteria3710Open in IMG/M
3300012927|Ga0137416_10540643All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300012927|Ga0137416_10780983All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium844Open in IMG/M
3300012927|Ga0137416_11617562All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium590Open in IMG/M
3300012929|Ga0137404_11148393All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium713Open in IMG/M
3300012930|Ga0137407_10638789All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1000Open in IMG/M
3300012972|Ga0134077_10017835All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2405Open in IMG/M
3300012976|Ga0134076_10242353All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium767Open in IMG/M
3300014166|Ga0134079_10517861All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium579Open in IMG/M
3300015054|Ga0137420_1107123All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1707Open in IMG/M
3300015054|Ga0137420_1157457All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300015054|Ga0137420_1315115All Organisms → cellular organisms → Bacteria1142Open in IMG/M
3300015357|Ga0134072_10008056All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2372Open in IMG/M
3300015359|Ga0134085_10028661All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2159Open in IMG/M
3300015359|Ga0134085_10214637All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium831Open in IMG/M
3300017654|Ga0134069_1035694All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1537Open in IMG/M
3300017654|Ga0134069_1077969All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300017654|Ga0134069_1094569All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300017654|Ga0134069_1303768All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium566Open in IMG/M
3300017659|Ga0134083_10385828All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium609Open in IMG/M
3300018433|Ga0066667_10521938All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium981Open in IMG/M
3300018482|Ga0066669_11081138All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium724Open in IMG/M
3300019255|Ga0184643_1176673All Organisms → cellular organisms → Bacteria3154Open in IMG/M
3300020170|Ga0179594_10384638All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium533Open in IMG/M
3300021086|Ga0179596_10021336All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2355Open in IMG/M
3300024288|Ga0179589_10427874All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium609Open in IMG/M
3300025905|Ga0207685_10522674All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium627Open in IMG/M
3300026295|Ga0209234_1262040All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium559Open in IMG/M
3300026305|Ga0209688_1041412All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium873Open in IMG/M
3300026307|Ga0209469_1031274All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1787Open in IMG/M
3300026310|Ga0209239_1357884All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium511Open in IMG/M
3300026315|Ga0209686_1004067All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes6613Open in IMG/M
3300026317|Ga0209154_1319375All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium510Open in IMG/M
3300026325|Ga0209152_10011916All Organisms → cellular organisms → Bacteria3011Open in IMG/M
3300026327|Ga0209266_1252023All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium568Open in IMG/M
3300026331|Ga0209267_1162392All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium908Open in IMG/M
3300026332|Ga0209803_1190805All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium765Open in IMG/M
3300026523|Ga0209808_1316636All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium505Open in IMG/M
3300026532|Ga0209160_1011454All Organisms → cellular organisms → Bacteria6458Open in IMG/M
3300026538|Ga0209056_10359150All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium947Open in IMG/M
3300027748|Ga0209689_1268017All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium682Open in IMG/M
3300027765|Ga0209073_10028058All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1722Open in IMG/M
3300027765|Ga0209073_10365794All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium585Open in IMG/M
3300027846|Ga0209180_10758469All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium523Open in IMG/M
3300027875|Ga0209283_10731596All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium615Open in IMG/M
3300031152|Ga0307501_10209086All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium562Open in IMG/M
3300031720|Ga0307469_10061320All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2433Open in IMG/M
3300031740|Ga0307468_100605014All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium896Open in IMG/M
3300032180|Ga0307471_104344853All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium500Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil29.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil29.31%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil14.66%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.90%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.03%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil5.17%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.59%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.72%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.86%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.86%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.86%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1010907213300002558Grasslands SoilNVAVVTPGRVRAYRRDSVQVGYGAVLQGGLSFRMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIAQD*
Ga0066674_1032103813300005166SoilTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED*
Ga0066672_1054550913300005167SoilSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED*
Ga0066683_1050497223300005172SoilRQGALAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYGAELRGGLSFRMVLALPRAGRDTVFRHLSFRDVYELAGRLGKLLGEN*
Ga0066683_1071242813300005172SoilLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRLVLALPRARRDTVFRHLSFRDVYELSRRLGKLIGED*
Ga0066680_1029794423300005174SoilPDSLAQPLRRQGALAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYAAELRAGLSFRMVLTLPRARRDTVFRHLSFRDVYELARRLGKLAGED*
Ga0066690_1030364223300005177SoilYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRLVLALPRARRDTVFRHLSFRDVYELSRRLGKLIGED*
Ga0066685_1067576313300005180SoilLLLVARRSVAVVTPHRVRAYRRDSVRAGYGAELRGGLSFRMVLLLSRARRDTVFRHLSFRDVYELSRRLGKLIGED*
Ga0066676_1075818313300005186SoilGDPALYVFSPRGADDTTLLLVARRSVVVVTPHRVRAYRRDSVRAGYGAELRGGLSFRMVLLLSRARRDTVFRHLSFRDVYELSRRLGKLIGED*
Ga0070714_10109807113300005435Agricultural SoilFGPRGVDDTTLLVVSRRSVAVVTPHRTRAYSRDGVRARFGLQLSGGLSFRMMLLLPRSRRDTVFRRLSFRDVYEAAPRLSKLLGEDTARTDR*
Ga0066689_1011119233300005447SoilALYVFSPRGADDTTLLLVARRNVVVVTPHRVRGYRRDSVQVRYGAELRGGLAFRMVLTLPRARRDTVFRHLSFRDVYLLSRRLGKLIGED*
Ga0066689_1023668213300005447SoilLRRQGALAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYAAELRAGLSFRMVLTLPRARRDTVFRHLSFRDVYELARRLGKLAGED*
Ga0070706_10209564913300005467Corn, Switchgrass And Miscanthus RhizosphereLLVARRSVAVVTPHGVRAYRRDSVQVRYGAGLRGGLSFRLVLALPRARRDTVFRHLSFRDVYELARRLGKLN*
Ga0070698_10149605823300005471Corn, Switchgrass And Miscanthus RhizosphereVVTPHGVRAYRRDSVQLRYGAELRGGLSFRLLLALPRARRDTVFRHLSFRDVYELVRRIGKLN*
Ga0070697_10077872123300005536Corn, Switchgrass And Miscanthus RhizosphereFGPRGVDDTTLLVVSRRSVAVVTPHRTRAYSRDGVRARFGLQLAGGLSFRMLLLLPRSRRDTVFRRLSFRDVYEAAPRLGKLLGEDAARVDR*
Ga0070697_10113345813300005536Corn, Switchgrass And Miscanthus RhizosphereQGAVAPGDVPLYVFGPRGVDDTTLLVVARRSVAVVTPGRVRAYPRDSARARFGLQLSGGLSFRLMLMLPGARRDTVFRRLSFRDVYETAPRLGKLLGEAGARTAR*
Ga0070697_10167712423300005536Corn, Switchgrass And Miscanthus RhizosphereSTLLLVARRSVVVVTPHGVRAYRRDSVQLRYGAELRGGLSFRLLLALPRARRDTVFRHLSFRDVYELVRRIGKLN*
Ga0066704_1078898623300005557SoilAQLLRRQGALAPGDVALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED*
Ga0066700_1005615313300005559SoilYVFSPRGADDTTLLLVARRNVVVVTPHRVRGYRRDSVQVRYGAELRGGLAFRMVLTLPRARRDTVFRHLSFRDVYLLSRRLGKLIGED*
Ga0066700_1035429123300005559SoilDDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED*
Ga0066699_1034726413300005561SoilDDTTLLLVARRNVAVVTPHRVRAYRRDSVQVGYGAELRGGLSFRMVLTLSRARRDTVFRHLSFRDVYELSRRLGKLIGEN*
Ga0066703_1073237713300005568SoilDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYGAELRGGLSFRMVLALPRAGRDTVFRHLSFRDVYELAGRLGKLLGEN*
Ga0066703_1077897723300005568SoilALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED*
Ga0066654_1018114313300005587SoilTLLLVARRSVVVVTPHRVRAYRRDSVRAGYGAELRGGLSFRMVLLLSRARRDTVFRHLSFRDVYELSRRLGKLIGEN*
Ga0070715_1037889913300006163Corn, Switchgrass And Miscanthus RhizosphereVARRGVAVVTPHRMRAYRRDSVQVRYGAVLRGGLSFQMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIAED*
Ga0079222_1157804523300006755Agricultural SoilPRGVDDTTLLVVARRSVAVVTPGRVRAYPRDSARARFGLQLSGGLSFRLMLMLPGGRRDTVFRRLSFRDVYETAPRLGKLLGEAAARTAR*
Ga0066658_1002431313300006794SoilVARRNVVVVTPHRVRGYRRDSVQVRYGAELRGGLAFRMVLTLPRARRDTVFRHLSFRDVYLLSRRLGKLIGED*
Ga0066665_1125769023300006796SoilFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYAAELRAGLSFRMVLTLPRARRDTVFRHLSFRDVYELARRLGKLAGED*
Ga0066659_1052067223300006797SoilLYVFGPRGVDDTTLLVVARRSVVVVTPHRIRAYPRDSARARFGLQLWPGLSFRMMLMLPRSRRDTVFRRLSLRDVYETAPRLGKLLGEDAARAGR*
Ga0066659_1057523823300006797SoilAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYGAELRGGLSFRMVLALPRAGRDTVFRHLSFRDVYELAGRLGKLLGEN*
Ga0066659_1083037213300006797SoilLYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED*
Ga0066659_1143161113300006797SoilLARGDVALYVFAPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYGAELEGGFSFRMVLALPRARRDTVFRHLSFRDVYELSRRLSTLIAED*
Ga0079221_1003038713300006804Agricultural SoilVVARRSVAVVTPRRVRAYPRDSARARFGLQLSGGLSFRLMLMLPGARRDTVFRRMSFRDVYETAPRLGNLLGEAAARTAR*
Ga0079221_1071023823300006804Agricultural SoilGADDSTLLLVARRSVVVVTPHGVRAYRRDSVQLRYGAELRGGLSFRLLLALPRARRDTVFRHLSFRDVYELVRRIGKLN*
Ga0079220_1108603913300006806Agricultural SoilTLLVVSRRSVAVVTPHRTRAYSRDGVRARFGLQLAGGLSFRMLLLLPRSRRDTVFRRLSFRDVYEAAPRLGKLLGDDAARADR*
Ga0099794_1024227823300007265Vadose Zone SoilLLVCRRNVAVVTPGRVRAYRRDSVQVGYGAVLQGGVSFRMVLTLPRARRDTVFRHLSFRDVYELSRRLGRLIAQD*
Ga0066710_10287510623300009012Grasslands SoilAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYGAELRGGLSFRMVLALPRAGRDTVFRHLSFRDVYELAGRLGKLLGEN
Ga0099829_1014887333300009038Vadose Zone SoilLRRQGALAPGDAALYVFSPRGADDSTLLLVARRNVAVVTPGRVRAYRRDSVQVGYGAVLQGGLSFRMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIAQD*
Ga0099828_1010561643300009089Vadose Zone SoilYLFSPRGADDTTLLLVARRSVAVVTPHGVRAYRRDSVQVRYGAELRGGLSFRLVLALPRARRDTVFRHLSFRDVYELARRLGKLN*
Ga0099827_1200539923300009090Vadose Zone SoilFSPRGADDSTLLLVARRSVAVVTPHGVRAYRRDSVQVRYGAELRGGLSFRLVLALPRARRDTVFRHLSFRDVYELARRLGQLN*
Ga0066709_10022289913300009137Grasslands SoilVALYVFAPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYGAELEGGFSFRMVLALPRARRDTVFRHLSFRDVYELSRRLSTLIAED*
Ga0066709_10248004023300009137Grasslands SoilRQGALAPGDPALYVFSPRGADDTTLLLVARRNVAVVTPHRVRAYRRDSVQVGYGAELRGGLSFRMVLLLSRARRDTVFRHLSFRDVYELSRRLGKLIGED*
Ga0099792_1020622823300009143Vadose Zone SoilSPRGADDSTLLLVARRSVAVVTPHGVRAYRRDSVQVRYGAELRGGLSFRLVLALPRARRDTVFRHLSFRDVYELARRLGKLN*
Ga0114129_1002822413300009147Populus RhizosphereTLLLVARRSVVVVTPHGVRAYRRDSVQLRYGAELRGGLSFRLLLALPRARRDTVFRHLSFRDVYELVRRIGKLN*
Ga0134070_1016384713300010301Grasslands SoilVYVFSPRGVDDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRLVLALPRARRDTVFRHLSFRDVYELSRRLGKLIGED*
Ga0134086_1004289713300010323Grasslands SoilPLRRQGALAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHGVRAYRRDSVRVSYAAELRGGLSFRMVLTLPRARRDTVFRHLSFRDVYELARRLGN*
Ga0134111_1045736913300010329Grasslands SoilRRSVAVVTPHGVRAYRRDSVRVRYGAELRGGLSLRLVLALPRARRDTVFRHLSFRDVYEVSRRLGKLIGED*
Ga0134063_1038211613300010335Grasslands SoilLRRQGALVPGDAALYVFSPRGADDTTLLLVARRNVAVVTPHRVRGYRRDSVQVRYGAELRGGLAFRMVLTLPRARRDTVFRHLSFRDVYLLSRLLGKLIGED*
Ga0134121_1095505413300010401Terrestrial SoilDSTLLLVARRNVAVVTPRRVRAYRRDSVQVGYEAVLQSGLSFRMVLTLPRAGRDTVFHHLSFRDVYELSRRLGKLIAQD*
Ga0134121_1243708413300010401Terrestrial SoilGVDDTTLLVVSRRSVAVVTPHRTRAYSRDGVRARFGLQLSGGLSFRMMLLLPRSRRDTVFRRLSFRDVYEAAPRLSKLLGEDTARTDR*
Ga0137389_1010657313300012096Vadose Zone SoilNVAVVTPRRVRAYRRDSVQVGYGAVLQGGLSFRMVLTLPRAGRDTVFRHLSFRDVYELSRRLGKLIAQD*
Ga0137364_1047813223300012198Vadose Zone SoilPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIGED*
Ga0137383_1007443713300012199Vadose Zone SoilPGDAALYVFSPRGADDTTLLLVARRNVAVVTPHRVRGYRRDSVQVRYGAELRGGLAFRMVLTLPRARRDTVFRHLSFRDVYLLSRLLGKLIGED*
Ga0137382_1058401013300012200Vadose Zone SoilRQGALAPGDVALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED*
Ga0137365_1015470633300012201Vadose Zone SoilVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED*
Ga0137363_1002854553300012202Vadose Zone SoilVAVVTPGRVRAYRRDSVQVGYGAVLQGGVSFRMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIAQD*
Ga0137399_1091844713300012203Vadose Zone SoilSVAVVTPHRVRGYRRDSVHVRYGADLRGGLAFRMVLALPRAHRDTVFRHLSFRDVYELVSRLGKLIGEN*
Ga0137378_1057193923300012210Vadose Zone SoilDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED*
Ga0137370_1004501313300012285Vadose Zone SoilPLRRQGALAPGDPALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVDYGPELRGGLSFRMVLLLSRARRDTVFRHLSFRDVYELSRRLSKLIGEH*
Ga0137387_1111381823300012349Vadose Zone SoilARRGVAVVTPHRVRAYRRDSVQVRYGAELRGGLAFRMVLTLPRARRDTVFRHLSFRDVYLLSRLLGKLIGED*
Ga0137371_1009207943300012356Vadose Zone SoilRGDDDPTPLVVPRRSVEVVTPHRVRAYRRDSVQVRYGAELEGGFSFRMVLALPRARRDTVFRHLSFRDVYELSRRLSTLVAED*
Ga0137384_1040657313300012357Vadose Zone SoilLYVFAPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYGAELEGGFSFRMVLALPRARRDTVFRHLSFRDVYELSRRLSTLIAED*
Ga0137360_1055580913300012361Vadose Zone SoilDSLAQPLRRQGALAPGDVALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRGLGKLIGED*
Ga0134049_103592613300012403Grasslands SoilLAQLLRRQGALALGDVALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRLVLALPRARRDTVFRHLSFRDVYELSRRLGKLIGED*
Ga0134050_140679613300012407Grasslands SoilALYVFSPRGADDTTLLLVARRSVAVVTPHGVRAYRRDSVRVSYAAELRGGLSFRMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIGED*
Ga0137358_1015009913300012582Vadose Zone SoilGDAALYVFSPRGADDSTLLLVGRRNVAVVTPGRVRAYRRDSVQVGYGAVLQGGLSFQMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIAQD*
Ga0137395_1073228913300012917Vadose Zone SoilPDSLAQPLRRQGALAPGDPALYLFSPSGADDTTLLLVARRGVAVVTPHRMRAYHRDSVQVRYGAVLRGGLSFQMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIAED*
Ga0137396_1002782813300012918Vadose Zone SoilTTLLLVARRSVVVVTPHRVRAYRRDSVQVRYGADLRGGLAFRLVLALPRARRDTVFRHLSFRDVYELASRLGKLIGEN*
Ga0137416_1054064313300012927Vadose Zone SoilGADDTTLLLVARRGVAVVTPHRMRAYRRDSVQVRYGAVLRGGLSFQMVLTLPRARRDTVFRHLSFRDIYELSRRLGKLIAED*
Ga0137416_1078098323300012927Vadose Zone SoilYVFSPRGADDSTLLLVGRRNVAVVTPGRVRAYRRDSVQVGYGAVLQGGLSFRMVLTLPRARRDTVFRHLSFRDVYELSRRLGRLIAQD*
Ga0137416_1161756213300012927Vadose Zone SoilSPSGADDTTLLLVARRGVAVVTPHRMRAYRRDSVQVRYGAVLRGGLSFQMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIAED*
Ga0137404_1114839323300012929Vadose Zone SoilSVAVVTPHRVRSYRRDSVQVSYGTVLRGGLSFRMVLTLPRARRDTVFRNLSFRDVFELSRRLGKLIAED*
Ga0137407_1063878913300012930Vadose Zone SoilLASGDAAVYVFAPRAADDSTLLLVTRRSVAVVTPHRVRSYRRDSVQVSYGTVLRGGLSFRMVLTLPRARRDTVFRNLSFRDVFELSRRLGKLIAED*
Ga0134077_1001783543300012972Grasslands SoilYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED*
Ga0134076_1024235323300012976Grasslands SoilAPGDPALYVFSPRGADDTTLLLVARRSVVVVTPHRVRAYRRDSVRAGYGAELRGGLSFRMVLLLSRARRDTVFRHLSFRDVYELSRRVGKLIGED*
Ga0134079_1051786123300014166Grasslands SoilARRNVAVVTPHRVRAYRRDSVQVGYGAELRGGLSFRMVLTLSRARRDTVFRHLSFRDVYELSRRLGKLIGEN*
Ga0137420_110712333300015054Vadose Zone SoilFSPRGADDTTLLLVARRNVAVVTPHRVRAYRRDSVQVRYGAVLQGGLSFRMVLTLPRARRDTVFRHLSFRDVYELSRRLSKLIAQD*
Ga0137420_115745713300015054Vadose Zone SoilATRPSTSSPPAAPDDSTLLLVARRNVAVVTPRRVRAYRRDSVQVGYGAVLQGGLSFQMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIAQD*
Ga0137420_131511513300015054Vadose Zone SoilLLVGRRNVAVAVVTPGRVRAYRRDSLQVGYGAVLQGGLSFRMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIAQD*
Ga0134072_1000805643300015357Grasslands SoilDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGLSFRMVLLLSRARRDTVFRHLSFRDVYELSRRLGKLIGEN*
Ga0134085_1002866143300015359Grasslands SoilADDTTLLLVARRNVAVVTPHRVRAYRRDSVQVGYGAELRGGLSFRMVLTLSRARRDTVFRHLSFRDVYELSRRLGKLIGEN*
Ga0134085_1021463713300015359Grasslands SoilPDSLAQLLRRQGALAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRLVLALPRARRDTVFRHLSFRDVYELSRRLGKLIGED*
Ga0134069_103569413300017654Grasslands SoilPDSLAQLLRRQGALAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRLVLALPRARRDTVFRHLSFRDVYELSRRLGKLIGED
Ga0134069_107796913300017654Grasslands SoilLLVARRSVAVVTPHGVRAYRRDSVRVSYAAELRGGLSFRMVLTLPRARRDTVFRHLSFRDVYELARRLDKLAGED
Ga0134069_109456923300017654Grasslands SoilLLLVARRNVAVVTPHRVRAYRRDSVQVGYGAELRGGLSFRMVLTLSRARRDTVFRHLSFRDVYELSRRLGKLIGEN
Ga0134069_130376813300017654Grasslands SoilRRSVAVVTPHGVRAYRRDSVRVRYGAELRGGLSLRLVLALPRARRDTVFRHLSFRDVYEVSRRLGKLIGED
Ga0134083_1038582823300017659Grasslands SoilGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYAAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELARRLGKLIGED
Ga0066667_1052193813300018433Grasslands SoilLYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED
Ga0066669_1108113813300018482Grasslands SoilTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED
Ga0184643_117667353300019255Groundwater SedimentYVFGPRGVDDTTLLVVARRSVAVVTPHRVRLYPRDSVQVRYAVGLWGGLGFRMMLALPRLRRDTVFRHLSFRDVYEVAPRLGKLLGADAERFTPRGAR
Ga0179594_1038463823300020170Vadose Zone SoilAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRLVLALPRARRDTVFRHLSFRDVYLLSRRLGKLIGED
Ga0179596_1002133643300021086Vadose Zone SoilDAALYLFSPRGADDSTLLLVARRSVAVVTPHGVRAYRRDSVQVRYGAELRGGLSFRLVLALPRARRDTVFRHLSFRDVYELARRLGQLN
Ga0179589_1042787413300024288Vadose Zone SoilYVFAPRAADDSTLLLVTRRSVAVVTPHRVRSYRRDSVQVSYGTVLRGGLAFRMVLTLPRARRDTVFRNLSFRDVFELSRRLGKLIAED
Ga0207685_1052267423300025905Corn, Switchgrass And Miscanthus RhizosphereTTLLLVARRGVAVVTPHRMRAYRRDSVQVRYGAVLRGGLSFQMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIAED
Ga0209234_126204013300026295Grasslands SoilLVARRSVAVVTPHRVRAYRRDSVQVRYGAELRGGLSFRMVLALPRAGRDTVFRHLSFRDVYELAGRLGKLLGEN
Ga0209688_104141213300026305SoilRQGALAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRLVLALPRARRDTVFRHLSFRDVYELSRRLGKLIGED
Ga0209469_103127413300026307SoilRRQGALVPGDAALYVFSPRGADDTTLLLVARRNVAVVTPHRVRGYRRDSVQVRYGAELRGGLAFRMVLTLPRARRDTVFRHLSFRDVYLLSRLLGKLIGED
Ga0209239_135788413300026310Grasslands SoilTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED
Ga0209686_100406713300026315SoilRQGALAPGDPALYVFSPRGADDTTLLLVARRNVAVVTPHRVRAYRRDSVQVGYGAELRGGLSFRMVLTLSRARRDTVFRHLSFRDVYELSRRLGKLIGEN
Ga0209154_131937513300026317SoilPIPNSLAQLLRRQGALALGDVALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED
Ga0209152_1001191613300026325SoilVARRNVVVVTPHRVRGYRRDSVQVRYGAELRGGLAFRMVLTLPRARRDTVFRHLSFRDVYLLSRRLGKLIGED
Ga0209266_125202313300026327SoilGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYGAELRGGLSFRMVLALPRAGRDTVFRHLSFRDVYELAGRLGKLLGEN
Ga0209267_116239213300026331SoilQGALAPGDVALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRMVLTLPRARRDTVFRRLSFRDVYELSRRLGKLIGED
Ga0209803_119080523300026332SoilDSLAQLLRRQGALAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYGAELRGGLSFRMVLALPRAGRDTVFRHLSFRDVYELAGRLGKLLGEN
Ga0209808_131663613300026523SoilVTRRSVAVVTPHGVRAYRRDSVRVRYGAELRGGLSLRLVLALPRARRDTVFRHLSFRDVYEVSRRLGKLIGED
Ga0209160_101145413300026532SoilPGDAALYVFSPRGADDTTLLLVARRNVVVVTPHRVRGYRRDSVQVRYGAELRGGFAFRMVLTLPRARRDTVFRHLSFRDVYLLSRRLGKLIGED
Ga0209056_1035915013300026538SoilQGALAPGDAALYVFSPRGADDTTLLLVARRSVAVVTPHRVRAYRRDSVQVRYAAELRAGLSFRMVLTLPRARRDTVFRHLSFRDVYELARRLGKLAGED
Ga0209689_126801713300027748SoilSVAVVTPHRVRAYRRDSVQVGYGAELRGGVSFRLVLALPRARRDTVFRHLSFRDVYELSRRLGKLIGED
Ga0209073_1002805833300027765Agricultural SoilVPLYVFGPRGVDDTTLLVVARRSVAVVTPGRVRAYPRDSARARFGLQLSGGLSFRLMLMLPGGRRDTVFRRLSFRDVYETAPRLGKLLGEAAARTAR
Ga0209073_1036579413300027765Agricultural SoilTLLVVSRRSVAVVTPHRTRAYSRDGVRARFGLQLAGGLSFRMLLLLPRSRRDTVFRRLSFRDVYEAAPRLGKLLGDDAARADR
Ga0209180_1075846923300027846Vadose Zone SoilSLAQPLRRQGALAPGDAALYLFSPSGADDTTLLLVARRGVAVVTPHRMRAYRRDSVQVRYGAVLRGGLSFQMVLALPRARRDTVFRHLSFRDVYELSRRLGKLIAED
Ga0209283_1073159623300027875Vadose Zone SoilRGADDTTLLLVARRSVAVVTPHGVRAYRRDSVQVRYGAELRGGLSFRLVLALPRARRDTVFRHLSFRDVYELARRLGKLN
Ga0307501_1020908613300031152SoilALYLFSPRGADDTTLLLVARRTVAVVTPHRVRAYRRDSVRVRYGAALRGGLSFRMVLALPRARRDTVYRHLSFRDVYELASRLGKLIGEN
Ga0307469_1006132043300031720Hardwood Forest SoilVFGPRGVDDTTLLVVGRRSVAVVTPGRVRAYPRDSARARFGLQLSGGLSFRLMLMLPGARRDTVFRRLSFRDVYETAPRLGKLLGEAAARTAR
Ga0307468_10060501423300031740Hardwood Forest SoilRQGAFAPGDVPLYVFGPRGVDDTTLLVVSRRSVAVVTPHRTRAYARDGVRARFGLQLAGGLSFRMLLLLPRSRRDTVFRRLSFRDVYEAAPRLGKLLGEDAARVDR
Ga0307471_10434485313300032180Hardwood Forest SoilLLVARRGVAVVTPHRMRAYRRDSVQVRYGVVLRGGLSLQMVLTLPRARRDTVFRHLSFRDVYELSRRLGKLIAED

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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