Metagenome / Metatranscriptome Family F079268

Basic Information
Family ID	F079268
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	60 residues
Representative Sequence	IGGPLIYVPQDADAEMIKAKHEEMQKALERVRDIAEGWFSLSEDERNRLRAEIGP
Number of Associated Samples	100
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.28 %
% of genes from short scaffolds (< 2000 bps)	87.07 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Bacteria (98.276 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.414 % of family members)
Environment Ontology (ENVO)	Unclassified (34.483 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.759 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.78% β-sheet: 0.00% Coil/Unstructured: 54.22%
Feature Viewer

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Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13180	PDZ_2	56.03
PF13365	Trypsin_2	21.55
PF02882	THF_DHG_CYH_C	2.59
PF13414	TPR_11	0.86
PF00756	Esterase	0.86
PF07883	Cupin_2	0.86
PF00441	Acyl-CoA_dh_1	0.86
PF01121	CoaE	0.86
PF02781	G6PD_C	0.86
PF11154	DUF2934	0.86
PF13603	tRNA-synt_1_2	0.86
PF13376	OmdA	0.86
PF13464	DUF4115	0.86
PF02517	Rce1-like	0.86
PF01012	ETF	0.86
PF01791	DeoC	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	2.59
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	2.59
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	0.86
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.86
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.86
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	0.86
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	0.86
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.86

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.28 %
Unclassified	root	N/A	1.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.79 %
Unclassified	root	N/A	1.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.59 %
Unclassified	root	N/A	1.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.59 %
Unclassified	root	N/A	1.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10026089	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300004152\|Ga0062386_100004449	All Organisms → cellular organisms → Bacteria	9710	Open in IMG/M
3300005437\|Ga0070710_10327235	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300005439\|Ga0070711_100225141	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300005533\|Ga0070734_10540456	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300005537\|Ga0070730_10668044	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005538\|Ga0070731_10280690	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300006162\|Ga0075030_100358953	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300006163\|Ga0070715_10289303	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300006854\|Ga0075425_100438138	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300009519\|Ga0116108_1015235	All Organisms → cellular organisms → Bacteria	2744	Open in IMG/M
3300009521\|Ga0116222_1337621	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300010043\|Ga0126380_10176338	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300010048\|Ga0126373_11811846	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300010048\|Ga0126373_12065928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300010339\|Ga0074046_10279864	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300010341\|Ga0074045_10121855	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300010358\|Ga0126370_12641917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300010361\|Ga0126378_10075575	All Organisms → cellular organisms → Bacteria	3245	Open in IMG/M
3300010361\|Ga0126378_12315390	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300010362\|Ga0126377_12331701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300010366\|Ga0126379_10092622	All Organisms → cellular organisms → Bacteria	2660	Open in IMG/M
3300010366\|Ga0126379_10851644	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300010366\|Ga0126379_11633260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300010398\|Ga0126383_10309889	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300012202\|Ga0137363_11746719	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300012930\|Ga0137407_10665351	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300014151\|Ga0181539_1357368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300014153\|Ga0181527_1155135	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300014156\|Ga0181518_10257738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300014164\|Ga0181532_10008446	All Organisms → cellular organisms → Bacteria	8276	Open in IMG/M
3300014199\|Ga0181535_10866804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300015264\|Ga0137403_10004578	All Organisms → cellular organisms → Bacteria	16274	Open in IMG/M
3300016357\|Ga0182032_11285255	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300016422\|Ga0182039_10077304	All Organisms → cellular organisms → Bacteria	2378	Open in IMG/M
3300016422\|Ga0182039_11149797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300016422\|Ga0182039_11287289	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300016445\|Ga0182038_11136795	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300016750\|Ga0181505_10378830	All Organisms → cellular organisms → Bacteria → Acidobacteria	3929	Open in IMG/M
3300017823\|Ga0187818_10256945	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300017934\|Ga0187803_10016237	All Organisms → cellular organisms → Bacteria	2971	Open in IMG/M
3300017935\|Ga0187848_10349368	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300017939\|Ga0187775_10504763	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300017942\|Ga0187808_10619579	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300017961\|Ga0187778_10915525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300017974\|Ga0187777_11305621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300017975\|Ga0187782_10106002	All Organisms → cellular organisms → Bacteria → Acidobacteria	2070	Open in IMG/M
3300018006\|Ga0187804_10552649	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300018086\|Ga0187769_10097242	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300018088\|Ga0187771_10213720	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300018090\|Ga0187770_10759205	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300019788\|Ga0182028_1001185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300020582\|Ga0210395_11180531	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300020583\|Ga0210401_11412608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300020583\|Ga0210401_11511400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300021168\|Ga0210406_10184984	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300021181\|Ga0210388_11002280	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300021181\|Ga0210388_11088996	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300021405\|Ga0210387_11433972	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300021405\|Ga0210387_11803905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300021475\|Ga0210392_10033499	All Organisms → cellular organisms → Bacteria	3043	Open in IMG/M
3300021475\|Ga0210392_10114856	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300021478\|Ga0210402_11314607	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300022530\|Ga0242658_1053868	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300025480\|Ga0208688_1075023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300026849\|Ga0207804_111223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300026868\|Ga0207818_1014963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300026898\|Ga0207788_1025537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300026909\|Ga0207858_1009382	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300026921\|Ga0207860_1015132	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300027000\|Ga0207803_1017571	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300027063\|Ga0207762_1026950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	892	Open in IMG/M
3300027516\|Ga0207761_1020012	All Organisms → cellular organisms → Bacteria → Acidobacteria	1353	Open in IMG/M
3300027516\|Ga0207761_1021299	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300027662\|Ga0208565_1235592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300027767\|Ga0209655_10200558	Not Available	656	Open in IMG/M
3300027857\|Ga0209166_10564903	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300027874\|Ga0209465_10234708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300027911\|Ga0209698_10258241	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300028047\|Ga0209526_10944539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300028906\|Ga0308309_11434194	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031231\|Ga0170824_114077487	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300031469\|Ga0170819_17193747	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300031708\|Ga0310686_105094272	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031719\|Ga0306917_11302983	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031748\|Ga0318492_10600325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300031771\|Ga0318546_10989293	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300031781\|Ga0318547_10790713	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031792\|Ga0318529_10208056	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300031795\|Ga0318557_10348554	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300031820\|Ga0307473_10058572	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300031820\|Ga0307473_11096337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300031879\|Ga0306919_10482190	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300031879\|Ga0306919_11186405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300031890\|Ga0306925_10998987	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300031910\|Ga0306923_10691003	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300031942\|Ga0310916_10657158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300031945\|Ga0310913_11013360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300031945\|Ga0310913_11319614	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300031946\|Ga0310910_10501664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300032041\|Ga0318549_10229770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300032059\|Ga0318533_10639752	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300032076\|Ga0306924_10367288	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300032091\|Ga0318577_10387146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300032094\|Ga0318540_10389239	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300032180\|Ga0307471_103426146	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300032261\|Ga0306920_103013410	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300032782\|Ga0335082_10625025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300032828\|Ga0335080_11676673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300032897\|Ga0335071_10084985	All Organisms → cellular organisms → Bacteria	3102	Open in IMG/M
3300032897\|Ga0335071_10589991	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300032897\|Ga0335071_11489572	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300032954\|Ga0335083_10153450	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300033289\|Ga0310914_11709148	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300033806\|Ga0314865_183180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.14%
Host-Associated	Host-Associated	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.48%
Aquatic	Environmental → Aquatic	14.66%
Plants	Host-Associated → Plants	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.48%
Freshwater	Environmental → Aquatic → Freshwater	12.93%
Sediment	Environmental → Aquatic → Sediment	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.66%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.93%
Loam	Environmental → Terrestrial → Soil → Loam	12.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.62%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.03%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.86%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300026849	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 46 (SPAdes)	Environmental	Open in IMG/M
3300026868	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 32 (SPAdes)	Environmental	Open in IMG/M
3300026898	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100260891	3300000597	Forest Soil	GHPPIYVPQDADSEMIRAKHEEMQKALEQVRDLTEGWFQLTEQERNRHRAEIGP*
Ga0062386_10000444912	3300004152	Bog Forest Soil	VPQDADAEMIKAKHEEMQKALERVRDIAEGWFSLSEEQRNRLRVEIGQ*
Ga0070710_103272352	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	FHIGVDRGKTIEKTWDHFLLPRLFARAIIIGGPLIYVPQDADADMIRAKHEEMQKALECVRDIAEGWFSLSEEERNRLRAEIGP*
Ga0070711_1002251412	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ARAIIIGGPLIYVPQDADAEMIKAKHEEMQKALERVRDIAEGWFSLSEDERNRLRAEIGP
Ga0070734_105404561	3300005533	Surface Soil	APILTFHIGVERGKTIEKTWDHFLLPGLFSRAVVIGLPPIFVPQDADSDTIKAKHEEMQKQLERGRDIAEGWFQLTEGERNRYRAELGA*
Ga0070730_106680441	3300005537	Surface Soil	WDHFLLPGLFARAVLIGGKPVHVPQDADAEMIEAKHQEMQKELERVRDIAEGWFSFTEEEREKYRAEFGK*
Ga0070731_102806902	3300005538	Surface Soil	DADAETIKAKHEEMQKELERVRDIAEGWFLLSESEQNRYRTEIGP*
Ga0075030_1003589531	3300006162	Watersheds	DPIYVPQDANPEMIEAKHQEMQKALERVRDIAEGWFQLSEAERNRHRSEIGP*
Ga0070715_102893031	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	HVPQDADAAMIEAKHQEMQKELERVRDIAEGWFSFTEEERDKYRAEFEK*
Ga0075425_1004381381	3300006854	Populus Rhizosphere	EKTWDHFLLPRLFARAIIIGGPLIYVPQDADAEMIKAKHAQMQKALERVRDIAEGWFSLSEDERNRLRVEIGR*
Ga0116108_10152351	3300009519	Peatland	FTRAVIIVEKPIYVPQDADPEMIKAKHEEMQKALERVRDIAEGWFAMSEDERNRYRAEFGP*
Ga0116222_13376211	3300009521	Peatlands Soil	VEKPIYVPQDADPEMIKAKHEEMQKALERVRDVAEAWYTLSEDERNRYRAEFGP*
Ga0126380_101763383	3300010043	Tropical Forest Soil	DHFLLPGLFARAVIIAGNPIRVARDTDAEMIKAKHEEMQKELERVRDIAEGWFSLTEEERNRYRNEIEP*
Ga0126373_118118461	3300010048	Tropical Forest Soil	TWDHFLLPGLFARAVIIAGSPIRVPPDAGADAIKAKHEEMQKELERVRDIAEGWFSFSDEERNRYRREVGP*
Ga0126373_120659282	3300010048	Tropical Forest Soil	LVFHVGVDRGKTVERTWDHFLLPGLYARAILIGGNAIHVPQDADSEMVKAKHEEMQKELERVRDIAEGWFSLSEEERNRYRAEIGP*
Ga0074046_102798641	3300010339	Bog Forest Soil	QDADSEMIKAKHEEMQKALERVRDIAEGWFAMSEDERNRYRAEFGP*
Ga0074045_101218551	3300010341	Bog Forest Soil	KTIEKTWDHFLLPGLFARAILVGAPPVLVPKDADAEVIKAKHEEMQKALERVRDIAEGWFSLTEEERNLYRVEIGS*
Ga0126370_126419172	3300010358	Tropical Forest Soil	YVPTDADSDTIKAKHQEMQKELERLRDIAEGWFSFTEDERDRYRAEIGT*
Ga0126378_100755755	3300010361	Tropical Forest Soil	ARTVLIGGNAIYVPQDADSDMIKLKHEEMQKELERVRDIAEGWFSLSEEERNRYRAEIGP
Ga0126378_123153902	3300010361	Tropical Forest Soil	IIGGRPVTVPQDADPDTIQAKHQEMQKELERVRDIAEGWFSLSEEERNRYRAEIGP*
Ga0126377_123317011	3300010362	Tropical Forest Soil	TWDHFLLPGLFARAVIIAGNPIRVSKDADSETIKVKHEEMQKELERVRDIAEGWFSLSEEERNRYRREIEP*
Ga0126379_100926225	3300010366	Tropical Forest Soil	FCVPHLFARAILIGAPPIYVPQDADSEMIKAKHQEMQRELERVRDLTEGWFALSEDERNQHRKAIGP*
Ga0126379_108516441	3300010366	Tropical Forest Soil	RGKTIEKTWDHFLLPGLFARAVIIAGNPIRVSRDADAEMIKAKHEEMQKELERVRDIAEGWFSFNEEERYRYRREIEP*
Ga0126379_116332602	3300010366	Tropical Forest Soil	VERGKTIEKTWDHFLLPGLFARAVIIGRTTIYVPTDADSDTITAQTQQVQKELERLRDIAEGWFSFTEDERDRYRAEIGT*
Ga0126383_103098892	3300010398	Tropical Forest Soil	IAGNPIRVSRDADAEMIKAKHEEMQKELERVRDIAEGWFSFNEEERYRYRREIEP*
Ga0137363_117467192	3300012202	Vadose Zone Soil	LPGLFARAVLIGGNPICVPQDADAAMIEAKHQEMQKELERVRDIAEGWFSFTDAEREKYVAEFGK*
Ga0137407_106653512	3300012930	Vadose Zone Soil	PGLFAHAVLIGGKPIFVPQDADAAVIETKHQEMQKELERVRDIAEGWFSFSEDQREKYRAEFM*
Ga0181539_13573682	3300014151	Bog	QDADSEMIKAKHEEMQKALERVRDIAEGWFAMSEDERSRYRAEFGP*
Ga0181527_11551352	3300014153	Bog	DSEMIKTKHEEMQKALERVRDIAEGWFAMSEDERNRYRAQIGP*
Ga0181518_102577382	3300014156	Bog	AVIIANEPIYVPKDADSEMIKAKHEEMQKALERVRDITEGWFAMSEDERNRYRAEIRP*
Ga0181532_100084461	3300014164	Bog	VPQDADPEMIKAKHEEMQKALERVRDISEGWFVLTDEERNRHRTEIGP*
Ga0181535_108668042	3300014199	Bog	AILIGAPPIQVPQDAGPETIDAKHQEMQKALERVRDIAEGWFKLTEDERNRYRGEIGP*
Ga0137403_1000457819	3300015264	Vadose Zone Soil	MASRCLPGLFARAVLIGGNPICVPQDADAAMIEAKHQEMQKELERVRDIAEGWFSFTDAEREKYRAEFGK*
Ga0182032_112852552	3300016357	Soil	FLLPGLFARAILIGHPPIYVPQDADSEVIRAKHEEMQKALENVRDLTEGWFKLTEEERNRHRAKIGP
Ga0182039_100773044	3300016422	Soil	FTRAVIIGAPPIPVPQDADSDMIKVKHEEMQKTLERVRDIAEGWFSLNEAERNRYRVEIG
Ga0182039_111497971	3300016422	Soil	WDHFLLPGPYARAILIGGNAIHVPQDADSEVIKAKHEEMQKELERVRDIAEGWFSLSEEQRNRYRSEIGP
Ga0182039_112872892	3300016422	Soil	AILIGHPPIYVPQDADSEMIRAKHEEMQKALEHVRDLTEGWFQLTEQERNRHRAEIGP
Ga0182038_111367951	3300016445	Soil	VNRGKTIEKTWDHFCVPHFFANAILIGGRPIHVPTDADSELIKAKHQEMQKELERVRDLAESWFAMSEEQRNRLRAEIGQ
Ga0181505_103788301	3300016750	Peatland	ILIGSPPIFVPQDADPETIKARHEEMQKALERVRDIAEGWFTFTEEERNRYRAEIGP
Ga0187818_102569451	3300017823	Freshwater Sediment	IYVPQDADSEMIKAKHEEMQKALERVRDIAEGWFGLTEDERNSYRSEIGP
Ga0187803_100162371	3300017934	Freshwater Sediment	PIHVPQDADSEMIKAKHEEMQKALERARDIAEGWFSLSEEERNRYRAEFGA
Ga0187848_103493681	3300017935	Peatland	IGSPPIYVPQDADSEMIKAKHEEMQKALERVRDIAENWYTMTEDERNRYRAELGP
Ga0187775_105047631	3300017939	Tropical Peatland	RAVLVEAPLIHVSPDADADEMARKHTEMQKELERVRDIAESWFMLGEAERERLRQEHDQE
Ga0187808_106195792	3300017942	Freshwater Sediment	LIGGEPIVVPQDADSETIRAKHQEMQKELERVRDLAEGWFAISEEERNRIRAEIGP
Ga0187778_109155251	3300017961	Tropical Peatland	AILIGGRPIHVPMDADSDTIKAKHEEMQKELERVRDLAEGWFSFGEEERSRLRAEIGK
Ga0187777_113056211	3300017974	Tropical Peatland	AILIGGRPIHVPMDADSDAIKAKYEEMQKELERVRDLAEGWFSVSEEERSHLRAEIGK
Ga0187782_101060021	3300017975	Tropical Peatland	DADSDAIRAKHQEMQKALERVRDLAEGWFAMSEEERNRHRAEIGP
Ga0187804_105526491	3300018006	Freshwater Sediment	RAVMIGSPPIFVPQDADPEMIKAKHEEMQKALERVRDIAESWYTMNEDERERYRAELGP
Ga0187769_100972423	3300018086	Tropical Peatland	LFAHAIVIGHPPIYVPTEADAETVKAKHQEMQKALERVRDIAEGWFSLSEEERNRYREELGP
Ga0187771_102137202	3300018088	Tropical Peatland	EPIHVPQDADSEMIRVKHQEMQKALERVRDIAEGWFTISEEERNRYRAEIGP
Ga0187770_107592052	3300018090	Tropical Peatland	WDHFLLPSLFTRAVLIGGEAIHVPQDADSDTIRAKHQEMQKALERVRDLAEGWFAISEEERNRHRAEIGP
Ga0182028_10011852	3300019788	Fen	ADSEMIKAKHEEMQKALERVRDIAEGWYAMSEDERNRYRAEFGP
Ga0210395_111805312	3300020582	Soil	DHFLLPGVFARAVLVGGNPIYVPQDADAGMIEAKHQEMQKELERVRDIAEGWFLFTDAEREKLRAEFGW
Ga0210401_114126082	3300020583	Soil	KPIYVPQDADAAMIEAKHQEMQKELERVRDIAEGWFSFTDAEKEKYREEFGS
Ga0210401_115114002	3300020583	Soil	GGPLIYVPQDADADMIRAKHEEMQKALECVRDIAEGWFSLSEEERNRLRAEIGP
Ga0210406_101849843	3300021168	Soil	HFLLPGLFARAVLIGAPAIRVPRDADSEMIKTKHEEMQKALEWVRDIAEGWFKLSEEERERYRKEIGE
Ga0210388_110022802	3300021181	Soil	RSPDWGKPIHVPQDADTAMIETKHQEMQKELERVRDIAEGWFSFSEAQREKYRAEFKS
Ga0210388_110889961	3300021181	Soil	IGVDRGKTIEKTWDHFLLPRLFARAIIIGGPLIYVPQDADADMIRAKHEEMQKALECVRDIAEGWFSLSEEERNRLRAEIGP
Ga0210387_114339721	3300021405	Soil	ADAEMIKAKHEEMQKALERVRDIAEGWFSLSEDERNRLRAEIGP
Ga0210387_118039051	3300021405	Soil	VPQDADAEMIKEKHEEMQEALERVRDIAEGWFALTEDERNRYRAEIGP
Ga0210392_100334991	3300021475	Soil	KTCDHFLLPGLFARAVLIGGRPIHVPQDADTAMIETKHQEMQKELERVRDIAEGWFSFSEAQREKYRAEFKS
Ga0210392_101148561	3300021475	Soil	IGAPPIYVPQDADAEMIKEKHEEMQKALERVRDIAEGWFALTEEERDRYREEIGP
Ga0210402_113146072	3300021478	Soil	IGGPLIYVPQDADAEMIKAKHEEMQKALERVRDIAEGWFSLSEDERNRLRAEIGP
Ga0242658_10538682	3300022530	Soil	DHFLLPGLFARAVLIGGRPIHVPQNADTAMIETKHQEMQKELERVRDIAEGWFSFSEAQREKYRAEFKS
Ga0208688_10750232	3300025480	Peatland	KPIYVPQDADPEMIKAKHEEMQKALERVRDIAEGWFAMSEDERNRYRAEFGP
Ga0207804_1112232	3300026849	Tropical Forest Soil	GKTIEKTWDHFCVPHFFANAVLIGGRPIHVPMDADSDMIKAKHEEMQKELERVRDLAEGWFAMTEEERNRLRAEIGK
Ga0207818_10149631	3300026868	Tropical Forest Soil	FANAVLIGGRPIHVPMDADSDMIKAKHEEMQKELERVRDLAEGWFAMTEEERNRLRAEIG
Ga0207788_10255372	3300026898	Tropical Forest Soil	PGLFARAILIGHPPIYVPQDADSETIRAKHEEMQKALENVRDLTEGWFKLTEEERNRHRAEIGP
Ga0207858_10093822	3300026909	Tropical Forest Soil	VPQAADSETIRAKHQEMQRALEYVRDLTEGWFKLTEEERNCHRAEIGP
Ga0207860_10151321	3300026921	Tropical Forest Soil	ADSETIRAKHEEMQKALENVRDLTEGWFKLTEEERNRHRAEIGP
Ga0207803_10175711	3300027000	Tropical Forest Soil	DHFLLPGLFARAILIGHPPIYVPQDADSETIRAKHEEMQKALENVRDLTEGWFKLTEEERNRHRAEIGP
Ga0207762_10269501	3300027063	Tropical Forest Soil	PGLFARAVIIGGRPIIVPQDADSDMIQAKHQEMQKELERVRDIAEGWFSFSEEERNRYRAKIGP
Ga0207761_10200121	3300027516	Tropical Forest Soil	APIMVFHIGVDRGKTMEKTWDHFLLPGLFARTVLIGLPPIHVPKDADSCTIKTKHEEMQKALERVRDIAENWFSLNEEERNRYREEFGSLTTTASL
Ga0207761_10212991	3300027516	Tropical Forest Soil	QDADSDMIQAKHQEMQKELERVRDIAEGWFSFSEEGRNRYRAEIGL
Ga0208565_12355922	3300027662	Peatlands Soil	KPIYVPQNADPEMIKAKHEEMQKALERVRDIAEGWYAMSEEERNRYRAEFGP
Ga0209655_102005581	3300027767	Bog Forest Soil	VGSPPIFVPQDADSEMIKAKHEEMQKQLERGRDLAEGWFQLTEDERNRYRAEFGS
Ga0209166_105649032	3300027857	Surface Soil	WDHFLLPGLFARAVLIGGKPVHVPQDADAEMIEAKHQEMQKELERVRDIAEGWFSFTEEEREKYRAEFGK
Ga0209465_102347081	3300027874	Tropical Forest Soil	LYARAILIGGRAIHVPQDADSEMIKAKHEEMQKELERVRDIAEGWFSLSEEERNRYRAEIGP
Ga0209698_102582411	3300027911	Watersheds	IAGNPIRVPLDADAGTITAKHEEMQQELERVRDLAESWFSLTEDQRSRYRTEFGP
Ga0209526_109445391	3300028047	Forest Soil	LLPGLFARAVLIGAPAIRVPRDADSEMIKAKQEEMQKALERVRDIAENWFALDEQERAGYRKEIGE
Ga0308309_114341941	3300028906	Soil	RAILVGSPLIHVPQDADAETIKAKHEEMQKALERVRDITEGWFSLTEEERQHYRAEIGP
Ga0170824_1140774871	3300031231	Forest Soil	ARAIIIGGPLIYVPQDADADMIRAKHEEMQKALERVRDIAEGWFSLSAEERNRLRAEIGP
Ga0170819_171937471	3300031469	Forest Soil	FLLPRLFARAIIIGGPLIYVPQDADADMIRAKHEEMQKALECVRDIAEGWFSLSEEERNRLRAEIGP
Ga0310686_1050942722	3300031708	Soil	TIHVPQDADAEMIERKHEEMQKALERVRDITEGWFSLTEEERNRYRAEIGS
Ga0306917_113029832	3300031719	Soil	ILIGGNAIHVPQDADSEVIKAKHEEMQKELERVRDIAEGWFSLSEEERNRYRAEIGP
Ga0318492_106003251	3300031748	Soil	PQDADSELIRVKHEEMQKALENVRDLTEGWFTLTEEERNRHRTEIGP
Ga0318546_109892932	3300031771	Soil	VPQDADSEMIRVKHEEMQKALEQVRDLTEGWFQLTEPERNRHRAEIGP
Ga0318547_107907131	3300031781	Soil	IGGEPIYVPRDADADMIRAKHEELQKALERVRDLAEGWFSRNEEERNRLRGEIGR
Ga0318529_102080562	3300031792	Soil	ARAILIGHPPIYVPQDADSEVIRAKHEEMQKALENVRDLTEGWFKLTEEERNRHRAEIGP
Ga0318557_103485541	3300031795	Soil	LLPGLFARAILIGHPPIYVPQDADSEMIRAKHEEMQKALEQVRDLTEGWFQLTEQERNRHRAEIGP
Ga0307473_100585723	3300031820	Hardwood Forest Soil	FLLPRLFARAIIIGGPLIYVPQDADAEMIKAKHEEMQKALERVRDIAEGWFSLSEDERNRLRAEIGV
Ga0307473_110963372	3300031820	Hardwood Forest Soil	PRLFARAIIIGGPLIYVPQDADADMIRAKHEEMQKALECVRDIAEGWFSLGEEERNRLRVEIGP
Ga0306919_104821901	3300031879	Soil	PLIHVPQDADSQTIDTKHGEMQKALERVRDITEGWFRLTEEERNRYRAEIGA
Ga0306919_111864052	3300031879	Soil	HFLLPGLHARAILIGGNAIHVPQDADSEIIKAKHEEMQKELERVRDIAEGWFSLSEEQRNRYRSEIGP
Ga0306925_109989871	3300031890	Soil	MVFHIGVDRGKTIQKTWDHFLLPRLFARAVIIGGPLIYVPQGADADMIKAKHEEMQKALERVRDIAEGWFSLSEEERNRLRTEIGP
Ga0306923_106910031	3300031910	Soil	FLLPGPYARAILIGGNAIHVPQDADSEVIKAKHEEMQKELERVRDIAEGWFSLSEEERNRYRAEIGP
Ga0310916_106571582	3300031942	Soil	EKTWDQFCVPHFFANAVLIGGRPIHVPMDADSDTIKAKHEQMQKELERVRDLAEGWFALSEEERNRLRAEIGK
Ga0310913_110133601	3300031945	Soil	CVPHFFANAVLIGGRPIHVPMDADSDTIKAKHEQMQKELERVRDLAEGWFALSEEERNRLRAEIGK
Ga0310913_113196142	3300031945	Soil	RGKTIQKTWDHFLLPRLFARAVIIGGPLIYVPQDADAEMIKVKHEEMQKALERVRDIAEGWFSLSEEERNRLRTEIGP
Ga0310910_105016641	3300031946	Soil	VFHVGVDKGKTIEKTWDQFCVPHFFANAVLIGGRPIHVPMDADSDTIKAKHEQMQKELERVRDLAEGWFALSEEERNRLRAEIGK
Ga0307479_101414624	3300031962	Hardwood Forest Soil	VPPDADSAMLEAKHSEMQKELERVRDVAEEWFSLSEKERNAQREAIGN
Ga0318549_102297701	3300032041	Soil	IGAPPIPVPQDADSDMIKVKHEEMQKTLERVRDIAEGWFSLNEAERNRYRVEIGP
Ga0318533_106397522	3300032059	Soil	HPPIYVPQDADSEMIRAKHEEMQKALEHVRDLTEGWFQLTEQERNRHRAEIGP
Ga0306924_103672883	3300032076	Soil	YVPQDADSEMIRVKHEEMQKALENVRDLTEGWFTLTEEERNRHRTEIGP
Ga0318577_103871462	3300032091	Soil	IHVPMDADSDTIKAKHEQMQKELERVRDLAEGWFALSEEERNRLRAEIGK
Ga0318540_103892391	3300032094	Soil	AHAILIGHPPIYVPQDADSEMIRAKHEEMQKALEHVRDLTEGWFQLTEQERNRHRAEIGP
Ga0307471_1034261461	3300032180	Hardwood Forest Soil	GPLIYVPQDADAEMIKAKHEEMQKALERVRDIAEGWFSLSEDERNRLRAEIGP
Ga0306920_1030134101	3300032261	Soil	KTWDHFLLPRLFARAVIIGGPLIYVPQDADAEMIKVKHEEMQKALERVRDIAEGWFSLSEEERNRLRTEIGP
Ga0335082_106250253	3300032782	Soil	DSEMIKAKHQEMQRELERVRDLAEGWFSMSEEEKNRHRKEIGP
Ga0335080_116766732	3300032828	Soil	APLIYVPQDADSEMIKAKHEEMQRELERVRDLAENWFAMSEEDRNRYRKEIGP
Ga0335071_100849851	3300032897	Soil	VIIVEKPIYVSQDADAEMIKAKHDEMQKALERVRDIAEGWFGMNENERNRFRAEFGP
Ga0335071_105899911	3300032897	Soil	ADSDMIQAKHQEMQKELERVRDIAEGWFSLSEEERNRYRAEIGP
Ga0335071_114895722	3300032897	Soil	PQDADADTVHAKHQEMQKELERVRDIAEGWFSLSETDRNRYRAEIGP
Ga0335083_101534503	3300032954	Soil	FARAVMIGAPFIYVPQDADSEMIKAKHEEMQKELERVRDLAENWFTMSEEERNRHRAEIG
Ga0310914_117091481	3300033289	Soil	VPQDADSEIIKAKHEEMQKELERVRDIAEGWFSLSEEQRNRYRSEIGP
Ga0314865_183180_386_559	3300033806	Peatland	VIVVEKPIYVRQDADADMIKAKHEEMQKALERVRDIAEGWFTMSEEGRNRYRAEFGP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079268

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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