Metagenome Family F079269

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079269
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	137 residues
Representative Sequence	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Number of Associated Samples	103
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.24 %
% of genes near scaffold ends (potentially truncated)	54.31 %
% of genes from short scaffolds (< 2000 bps)	64.66 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.552 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.828 % of family members)
Environment Ontology (ENVO)	Unclassified (30.172 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.862 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 77.69% β-sheet: 0.00% Coil/Unstructured: 22.31%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00891	Methyltransf_2	30.17
PF03413	PepSY	14.66
PF03625	DUF302	6.03
PF13089	PP_kinase_N	4.31
PF00916	Sulfate_transp	3.45
PF07676	PD40	3.45
PF12681	Glyoxalase_2	3.45
PF09830	ATP_transf	1.72
PF01740	STAS	1.72
PF00106	adh_short	0.86
PF13090	PP_kinase_C	0.86
PF01253	SUI1	0.86
PF03404	Mo-co_dimer	0.86
PF08327	AHSA1	0.86
PF00903	Glyoxalase	0.86
PF09411	PagL	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	6.03
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	3.45
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	3.45
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	3.45
COG0023	Translation initiation factor 1 (eIF-1/SUI1)	Translation, ribosomal structure and biogenesis [J]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.55 %
Unclassified	root	N/A	28.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.55 %
Unclassified	root	N/A	28.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.55 %
Unclassified	root	N/A	28.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	22.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	21.55 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.45 %
uncultured bacterium fosmid pJB190D12_contig II	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium fosmid pJB190D12_contig II	1.72 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	21.55 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.45 %
uncultured bacterium fosmid pJB190D12_contig II	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium fosmid pJB190D12_contig II	1.72 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	21.55 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3.45 %
uncultured bacterium fosmid pJB190D12_contig II	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium fosmid pJB190D12_contig II	1.72 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	19.83 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	3.45 %
uncultured bacterium fosmid pJB190D12_contig II	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium fosmid pJB190D12_contig II	1.72 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	4.31 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	3.45 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	1.72 %
uncultured bacterium fosmid pJB190D12_contig II	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium fosmid pJB190D12_contig II	1.72 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	4.31 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	3.45 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1.72 %
uncultured bacterium fosmid pJB190D12_contig II	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium fosmid pJB190D12_contig II	1.72 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	4.31 %
unclassified Anaeromyxobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter	3.45 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1.72 %
uncultured bacterium fosmid pJB190D12_contig II	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium fosmid pJB190D12_contig II	1.72 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.45 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	4.31 %
Anaeromyxobacter sp. Fw109-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. Fw109-5	3.45 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1.72 %
uncultured bacterium fosmid pJB190D12_contig II	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium fosmid pJB190D12_contig II	1.72 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2001200001\|2001233937	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1634	Open in IMG/M
2162886007\|SwRhRL2b_contig_1379582	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3535	Open in IMG/M
2228664021\|ICCgaii200_c1020127	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	6865	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0788386	Not Available	513	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0788404	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300000043\|ARcpr5yngRDRAFT_c018425	Not Available	588	Open in IMG/M
3300000787\|JGI11643J11755_11735637	Not Available	747	Open in IMG/M
3300000787\|JGI11643J11755_11750549	Not Available	533	Open in IMG/M
3300000890\|JGI11643J12802_10810041	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300000891\|JGI10214J12806_10237211	All Organisms → cellular organisms → Bacteria	1639	Open in IMG/M
3300000953\|JGI11615J12901_10256098	Not Available	516	Open in IMG/M
3300001989\|JGI24739J22299_10117846	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300001991\|JGI24743J22301_10148547	Not Available	524	Open in IMG/M
3300003347\|JGI26128J50194_1004516	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300003371\|JGI26145J50221_1010240	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300003383\|JGI26140J50224_104389	Not Available	535	Open in IMG/M
3300003392\|JGI26134J50242_103406	Not Available	544	Open in IMG/M
3300003405\|JGI26132J50249_102510	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300004114\|Ga0062593_102422875	Not Available	593	Open in IMG/M
3300004114\|Ga0062593_103324351	Not Available	516	Open in IMG/M
3300004156\|Ga0062589_100594127	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300005335\|Ga0070666_10024114	All Organisms → cellular organisms → Bacteria	3962	Open in IMG/M
3300005344\|Ga0070661_100032642	All Organisms → cellular organisms → Bacteria	3768	Open in IMG/M
3300005355\|Ga0070671_100090088	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300005366\|Ga0070659_100004060	All Organisms → cellular organisms → Bacteria	10438	Open in IMG/M
3300005367\|Ga0070667_100004246	All Organisms → cellular organisms → Bacteria	12101	Open in IMG/M
3300005439\|Ga0070711_100216205	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1487	Open in IMG/M
3300005466\|Ga0070685_10053250	All Organisms → cellular organisms → Bacteria	2344	Open in IMG/M
3300005530\|Ga0070679_100097990	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. Fw109-5	2919	Open in IMG/M
3300005544\|Ga0070686_101481894	Not Available	571	Open in IMG/M
3300005549\|Ga0070704_100061553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. Fw109-5	2687	Open in IMG/M
3300005577\|Ga0068857_100092157	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. Fw109-5	2713	Open in IMG/M
3300005614\|Ga0068856_100970897	Not Available	868	Open in IMG/M
3300005719\|Ga0068861_100073306	All Organisms → cellular organisms → Bacteria	2660	Open in IMG/M
3300006163\|Ga0070715_10269104	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300006358\|Ga0068871_100010244	All Organisms → cellular organisms → Bacteria	6830	Open in IMG/M
3300006755\|Ga0079222_11037710	Not Available	710	Open in IMG/M
3300006845\|Ga0075421_100105432	All Organisms → cellular organisms → Bacteria	3544	Open in IMG/M
3300006852\|Ga0075433_10161971	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300006852\|Ga0075433_10184110	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium fosmid pJB190D12_contig II	1858	Open in IMG/M
3300006854\|Ga0075425_100183094	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300006854\|Ga0075425_101077526	Not Available	915	Open in IMG/M
3300007076\|Ga0075435_100077922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. Fw109-5	2717	Open in IMG/M
3300007076\|Ga0075435_100993956	Not Available	732	Open in IMG/M
3300009100\|Ga0075418_10121277	All Organisms → cellular organisms → Bacteria	2778	Open in IMG/M
3300009148\|Ga0105243_10005460	All Organisms → cellular organisms → Bacteria	9920	Open in IMG/M
3300009156\|Ga0111538_11875986	Not Available	754	Open in IMG/M
3300009162\|Ga0075423_10027736	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	5695	Open in IMG/M
3300009174\|Ga0105241_10042827	Not Available	3428	Open in IMG/M
3300010396\|Ga0134126_10320902	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1813	Open in IMG/M
3300012517\|Ga0157354_1023165	Not Available	738	Open in IMG/M
3300012895\|Ga0157309_10328108	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012896\|Ga0157303_10106325	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300012897\|Ga0157285_10030653	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1209	Open in IMG/M
3300012899\|Ga0157299_10048646	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300012901\|Ga0157288_10002019	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2581	Open in IMG/M
3300012912\|Ga0157306_10001099	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	5147	Open in IMG/M
3300012951\|Ga0164300_10000777	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	6642	Open in IMG/M
3300012951\|Ga0164300_10164409	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1054	Open in IMG/M
3300012955\|Ga0164298_10193277	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	1183	Open in IMG/M
3300012957\|Ga0164303_10019089	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2604	Open in IMG/M
3300012957\|Ga0164303_10282868	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300012958\|Ga0164299_10002468	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	5652	Open in IMG/M
3300012960\|Ga0164301_10199662	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300012960\|Ga0164301_11099871	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300012961\|Ga0164302_10207418	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	1211	Open in IMG/M
3300012984\|Ga0164309_10004414	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	6588	Open in IMG/M
3300012986\|Ga0164304_10117484	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300012987\|Ga0164307_10580970	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300012989\|Ga0164305_10210286	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	1375	Open in IMG/M
3300013102\|Ga0157371_10787995	Not Available	716	Open in IMG/M
3300013296\|Ga0157374_10169746	Not Available	2127	Open in IMG/M
3300013296\|Ga0157374_10614665	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300014326\|Ga0157380_10037035	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3779	Open in IMG/M
3300015371\|Ga0132258_11744141	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1570	Open in IMG/M
3300015372\|Ga0132256_100003076	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	14193	Open in IMG/M
3300015372\|Ga0132256_100361645	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1547	Open in IMG/M
3300015373\|Ga0132257_100011049	All Organisms → cellular organisms → Bacteria	9056	Open in IMG/M
3300015373\|Ga0132257_103736812	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300015374\|Ga0132255_101054109	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	1221	Open in IMG/M
3300017792\|Ga0163161_11418912	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300018067\|Ga0184611_1250472	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300019361\|Ga0173482_10000214	All Organisms → cellular organisms → Bacteria	9703	Open in IMG/M
3300022737\|Ga0247747_1021127	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300022893\|Ga0247787_1033221	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300022901\|Ga0247788_1001565	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3524	Open in IMG/M
3300023057\|Ga0247797_1002982	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300023064\|Ga0247801_1004650	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300025901\|Ga0207688_10008048	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	5736	Open in IMG/M
3300025903\|Ga0207680_10747852	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300025931\|Ga0207644_10913228	Not Available	736	Open in IMG/M
3300025935\|Ga0207709_10003357	All Organisms → cellular organisms → Bacteria	9568	Open in IMG/M
3300025986\|Ga0207658_11305931	Not Available	663	Open in IMG/M
3300026078\|Ga0207702_11634015	Not Available	637	Open in IMG/M
3300026095\|Ga0207676_10024792	All Organisms → cellular organisms → Bacteria	4443	Open in IMG/M
3300026142\|Ga0207698_11015937	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300027360\|Ga0209969_1000195	All Organisms → cellular organisms → Bacteria	8141	Open in IMG/M
3300027385\|Ga0207540_101181	Not Available	816	Open in IMG/M
3300027552\|Ga0209982_1088611	Not Available	512	Open in IMG/M
3300027880\|Ga0209481_10298342	Not Available	817	Open in IMG/M
3300031538\|Ga0310888_10071243	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium fosmid pJB190D12_contig II	1693	Open in IMG/M
3300031716\|Ga0310813_10088505	All Organisms → cellular organisms → Bacteria	2380	Open in IMG/M
3300031854\|Ga0310904_10519715	Not Available	801	Open in IMG/M
3300031913\|Ga0310891_10242829	Not Available	619	Open in IMG/M
3300031943\|Ga0310885_10032667	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300031943\|Ga0310885_10050515	Not Available	1724	Open in IMG/M
3300032003\|Ga0310897_10081213	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300032012\|Ga0310902_10484806	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300032017\|Ga0310899_10165269	Not Available	956	Open in IMG/M
3300032075\|Ga0310890_10020124	All Organisms → cellular organisms → Bacteria	3407	Open in IMG/M
3300032122\|Ga0310895_10284102	Not Available	777	Open in IMG/M
3300032174\|Ga0307470_10596832	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300032179\|Ga0310889_10113507	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1171	Open in IMG/M
3300032180\|Ga0307471_103611433	Not Available	547	Open in IMG/M
3300032421\|Ga0310812_10009394	Not Available	3218	Open in IMG/M
3300033475\|Ga0310811_10119136	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3385	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.17%
Host-Associated	Host-Associated	44.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.31%
Plants	Host-Associated → Plants	44.83%
Aquatic	Environmental → Aquatic	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.83%
Sediment	Environmental → Aquatic → Sediment	0.86%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.62%
Loam	Environmental → Terrestrial → Soil → Loam	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.90%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	6.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2001200001	Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150	Environmental	Open in IMG/M
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000043	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere	Host-Associated	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300003347	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM	Host-Associated	Open in IMG/M
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated	Open in IMG/M
3300003383	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM	Host-Associated	Open in IMG/M
3300003392	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM	Host-Associated	Open in IMG/M
3300003405	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027385	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-11 (SPAdes)	Environmental	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2001261435	2001200001	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSVVVLYGLNRGWHKRDGYPKFLRRLDLQTRFTNLFENTLVLAVTNTVLALLAVAFSIFLFLHGRMLIRT
SwRhRL2b_0053.00005990	2162886007	Switchgrass Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
ICCgaii200_10201274	2228664021	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSXXVLXGLNRGWHKXDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFFIFLFLHGRMLVRA
ICChiseqgaiiDRAFT_07883861	3300000033	Soil	GLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSIVVLYGLNRGWHKXDGYPXXLRRLDLQTRFTNLFENTLVLAVTNTVLALLAVAFXIFLFLHGRMLIRT*
ICChiseqgaiiDRAFT_07884042	3300000033	Soil	GLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFFIFLFLHGRMLVRA*
ARcpr5yngRDRAFT_0184252	3300000043	Arabidopsis Rhizosphere	WFFWAFVGLVWLVISVPFSGDSLKALLDIPDTPPRSQGEMEKLLQNTIYAANFSILSILMLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNAVLVLLAVVFSIFLFLHGRMLVRA*
JGI11643J11755_117356372	3300000787	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQXXXGKLLQNIIYAANFSILSXXVLXGLNRGWHKXDGYPKXLRRLDLXTRXTNLFENKPVLAVTNTVLALLAVAFFIFLFLHGRMLVRA*
JGI11643J11755_117505491	3300000787	Soil	AFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSIVVLYGLNRGWHKTDGYPKFLRRLDLQTRFTNLFENTLVLAVTNTVLALLAVAFSIFLFLHGRMLIRT*
JGI11643J12802_108100411	3300000890	Soil	FWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFFIFLFLHGRMLVRA*
JGI10214J12806_102372111	3300000891	Soil	LFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
JGI11615J12901_102560981	3300000953	Soil	VISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSIVVLYGLNRGWHKTDGYPKFLRRLDLQTRFTNLFENTLVLAVTNTVLALLAVAFSIFLFLHGRMLIRT*
JGI24739J22299_101178462	3300001989	Corn Rhizosphere	FDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
JGI24743J22301_101485472	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	DSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
JGI26128J50194_10045162	3300003347	Arabidopsis Thaliana Rhizosphere	SQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
JGI26145J50221_10102402	3300003371	Arabidopsis Thaliana Rhizosphere	ARHVPRNVWRHNFDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
JGI26140J50224_1043891	3300003383	Arabidopsis Thaliana Rhizosphere	GDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
JGI26134J50242_1034061	3300003392	Arabidopsis Thaliana Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLA
JGI26132J50249_1025101	3300003405	Arabidopsis Thaliana Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0062593_1024228752	3300004114	Soil	MKKASWFFWGFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRFDLQTRFTNLFESKLVLAV
Ga0062593_1033243511	3300004114	Soil	VISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSVIVLYGLNRGWHKRDGYPKFLRRLDLQTRFTNLFENTLVLAVTNTVLALLAVAFSIFLFLHGRMLIRT*
Ga0062589_1005941272	3300004156	Soil	MKKASWFFWGFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRFDLQTRFTNLFESKLVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0070666_100241146	3300005335	Switchgrass Rhizosphere	GESQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0070661_1000326427	3300005344	Corn Rhizosphere	FYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0070671_1000900881	3300005355	Switchgrass Rhizosphere	VGLGLSIVRNKVGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPDTPPRSQGEMEKLLQNTIYAANFSILSILMLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLVLLAVVFSIFLFLHGRMLVRA*
Ga0070659_10000406010	3300005366	Corn Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVFALLAVAFSICLFLHGRMLVRA*
Ga0070667_10000424610	3300005367	Switchgrass Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSICLFLHGRMLVRA*
Ga0070711_1002162052	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSGSLASTTWAIFPQSRSSALLAALAFRVRQGPWPTTRREKLDGAVFDFRTGLFYCDCQMKKASWFFWAFVGLVWLVISLPFSGDSLKAVFDIPDTPPSSQDELGKLLQNITYAANFSILSILVLYGLNRGWHETDGYPKWLHRLHLQARFTNLFQSKLVLAATNTVLALLALVFSILLFFHGRMLVAV*
Ga0070685_100532501	3300005466	Switchgrass Rhizosphere	NVWRHNFDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDSPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0070679_1000979901	3300005530	Corn Rhizosphere	FVGLVWLVISLPFAGDSLKALLEFPDSPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Ga0070686_1014818941	3300005544	Switchgrass Rhizosphere	RHNFDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0070704_1000615534	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VGLLPAACHETIGGTIFDFRAGVFYGESQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0068857_1000921571	3300005577	Corn Rhizosphere	FFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0068856_1009708972	3300005614	Corn Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLI
Ga0068861_1000733064	3300005719	Switchgrass Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSICL
Ga0070715_102691041	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	PWRNRFKGLSHNTSWTMSGSLASTTWAIFPQSRSSALLAALAFRVGQGPWPTTRREKLDGAVFDFRTGLFYCDCQMKKASWFFWAFVGLVWLVISLPFSGDSLKALFAIPETPPSSQDELGKLLQNITYAANFSILSILVLYGLNRGWHETDGYPKWLHRLHLQARFTNLFQSKLVLAATNTVLALLALVFSILLFFHGRMLVAV*
Ga0068871_10001024411	3300006358	Miscanthus Rhizosphere	WFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0079222_110377102	3300006755	Agricultural Soil	MKKASWFFWAFVGLVWLVISLPFSGDSLKALFAIPETPPSSQDELGKLLQNITYAANFSILSILVLYGLIRGWHETDGYPKWLHRLHLQARFTNLFQSQLVLAATNTVLALLAVVFSILLFFHGRMLLRGLG*
Ga0075421_1001054326	3300006845	Populus Rhizosphere	LVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0075433_101619713	3300006852	Populus Rhizosphere	PAARHVPRNVWRHNFDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0075433_101841104	3300006852	Populus Rhizosphere	MKKASWFFWGFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRFDLQTRFTNLFESKLVLAVTNTVLALLA
Ga0075425_1001830943	3300006854	Populus Rhizosphere	MKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0075425_1010775262	3300006854	Populus Rhizosphere	VRNKVGSEKRRLPAAGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPYTPPRLQGEMEKLLQNTIYAANFSILSILMLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNAVLVLLAVVFSIFLFLHGRMLVRA*
Ga0075435_1000779224	3300007076	Populus Rhizosphere	SQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDSPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0075435_1009939561	3300007076	Populus Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTV
Ga0075418_101212773	3300009100	Populus Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRFDLQTRFTNLFESKLVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0105243_100054601	3300009148	Miscanthus Rhizosphere	NFDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0111538_118759862	3300009156	Populus Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDSPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLA
Ga0075423_100277362	3300009162	Populus Rhizosphere	VPQNVWRHNFDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0105241_100428274	3300009174	Corn Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLIRT*
Ga0134126_103209022	3300010396	Terrestrial Soil	VPQNVWRHNFDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPGLAVTNTVLALRAVAFSICLFLHGRMLVRA*
Ga0157354_10231651	3300012517	Unplanted Soil	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPDTPPRSQGEMEKLLQNTIYAANFSILSILMLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNAVLVLLAVVFSIF
Ga0157309_103281082	3300012895	Soil	VGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0157303_101063251	3300012896	Soil	DSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRFDLQTRFTNLFESKLVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0157285_100306532	3300012897	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFFIFLFLHGRMLVRA*
Ga0157299_100486462	3300012899	Soil	MKKASWFFWGFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFFIFLFLHGRMLVRA*
Ga0157288_100020192	3300012901	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSMISVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0157306_100010992	3300012912	Soil	MKKASWFFWAFVGLVWLVISLSFAGDSLKALLEFPDSPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0164300_100007773	3300012951	Soil	VGSEKRRLPAAGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAFVGLVWLVISVPFSGDSLKALLDIPYTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLVLLAVVFSIFLFLHGRMLVRA*
Ga0164300_101644092	3300012951	Soil	MKKASWFFWALVGLVWLVISLPFSGDSLKALLEIPDTPPSSQDELGKLLQNITYAANFSILSILVLYGLNRGWHETDGYPKWLQRLHLQARFTSLFQSKLVLAATNTVLALLALVFSIFLFLHGRMLVRA*
Ga0164298_101932771	3300012955	Soil	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPYTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLVLLAVVFSIFLFLHGRMLVRA*
Ga0164303_100190892	3300012957	Soil	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAFVGLVWLVISVPFSGDSLKALLDIPYTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLVLLAVVFSIFLFLHGRMLVRA*
Ga0164303_102828681	3300012957	Soil	MKKASWFFWAFVGLVWLVISLPFSGDSLKALLEIPDTPPSSQDELGKLLQNITYAANFSILSILVLYGLNRGWHETDGYPKWLQRLHLQARFTSLFQSKLVLAATNTVLALLALVFSIFLFLHGRMLVRA*
Ga0164299_100024684	3300012958	Soil	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPDTPPSSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKTDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLVLLAVVFSIFLFLHGRMLVRA*
Ga0164301_101996621	3300012960	Soil	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPYTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVFAATNTVLVLLAVVFSIFLFLHGRMLVRA*
Ga0164301_110998712	3300012960	Soil	FFWAFVGLVWLVISLPFSGDSWKALFDIPDTPPSSQDELGKLLQNITYAANFSILSILVLYGLNRGWHETDGYPKWLHRLHLQARFTNLFQSKLVLAATNTVLALLALVFSILLFFHGRMLVAV*
Ga0164302_102074183	3300012961	Soil	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPYTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKTDGYPKFLQRLDLQVRFTNLFENKLVLAATNAVLVLLAVVFSIFLFLHGRMLVRA*
Ga0164309_100044142	3300012984	Soil	VGSEKRRLPAAGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPDTPPRSQGEMEKLLQNTIYAANFSILSILMLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNAVLVLLAVVFSIFLFLHGRMLVRA*
Ga0164304_101174842	3300012986	Soil	MKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPYTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVFAATNTVLVLLAVVFSIFLFLHGRMLVRA*
Ga0164307_105809702	3300012987	Soil	WAFVGLVWLVISLPFSGDSLKALLEIPDTPPSSQDELGKLLQNITYAANFSILSILVLYGLNRGWHETDGYPKWLQRLHLQARFTSLFQSKLVLAATNTVLALLALVFSIFLFLHGRMLVRA*
Ga0164305_102102863	3300012989	Soil	VREKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPDTPPSSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLVLLAVVFSIFLFLHGRMLVRA*
Ga0157371_107879951	3300013102	Corn Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVR
Ga0157374_101697461	3300013296	Miscanthus Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSI
Ga0157374_106146652	3300013296	Miscanthus Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRFDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0157380_100370354	3300014326	Switchgrass Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLELLAVAFSIFLFLHGRMLVRA*
Ga0132258_117441412	3300015371	Arabidopsis Rhizosphere	VGQGPWPTTRREKLDGAVFDFRTGLFYCDCQMKKASWFFWAFVGLVWLVISLPFSGDSLKALFDIPDTPPSSQDELGKLLQNITYAANFSILSILVLYGLNRGWHETDGYPKWLHRLHLQARFTNLFQSKLVLAATNTVLALLALVFSILLFFHGRMLVAV*
Ga0132256_10000307612	3300015372	Arabidopsis Rhizosphere	MWAVRRCSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPDTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNAVLVLLAVVFSIFLFLHGRMLVRA*
Ga0132256_1003616453	3300015372	Arabidopsis Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRFDLQTRFTNLFESKLVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0132257_1000110492	3300015373	Arabidopsis Rhizosphere	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPYTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNAVLVLLAVVFSIFLFLHGRMLVRA*
Ga0132257_1037368121	3300015373	Arabidopsis Rhizosphere	LPFAGDPLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA*
Ga0132255_1010541093	3300015374	Arabidopsis Rhizosphere	MWAVRRCSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPDTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATN
Ga0163161_114189122	3300017792	Switchgrass Rhizosphere	GLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Ga0184611_12504722	3300018067	Groundwater Sediment	VTIKKKASWFFWAFVGLVWLVISLPFSGDSLKALLDIPDTPPSSQDELGKLLQNIAYAANFSILSILVLFGLNRGWHETDGYPKWLQRLHLQARFTNLFQSKLVLAATNIVLALLALVFSIFLFLHGRMLVRA
Ga0173482_1000021410	3300019361	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLIRT
Ga0247747_10211271	3300022737	Soil	STSLGWPAARHVPRNVWRHNFDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDSPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Ga0247787_10332212	3300022893	Soil	VGYSTSLGWPAARHVPRNVWRHNFDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Ga0247788_10015654	3300022901	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSICLFLHGRMLVRA
Ga0247797_10029822	3300023057	Soil	STSLGWPAARHVPRNVWRHNFDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Ga0247801_10046502	3300023064	Soil	LPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Ga0207688_100080484	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDSPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Ga0207680_107478521	3300025903	Switchgrass Rhizosphere	GDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Ga0207644_109132281	3300025931	Switchgrass Rhizosphere	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPDTPPRSQGEMEKLLQNTIYAANFSILSILMLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVFAATNTVLVLLAVVFSIFLFLHGRMLVRA
Ga0207709_100033571	3300025935	Miscanthus Rhizosphere	QMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Ga0207658_113059311	3300025986	Switchgrass Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLH
Ga0207702_116340151	3300026078	Corn Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAV
Ga0207676_100247925	3300026095	Switchgrass Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRFDLQTRFTNLFESKLVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Ga0207698_110159372	3300026142	Corn Rhizosphere	RNVWRHNFDFRDGLFYGDSQMKKASWFFWAFVGLVWLVISLLFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAIAFSIFLFLHGRMLVRA
Ga0209969_10001959	3300027360	Arabidopsis Thaliana Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFFIFLFLHGRMLVRA
Ga0207540_1011812	3300027385	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALL
Ga0209982_10886111	3300027552	Arabidopsis Thaliana Rhizosphere	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFS
Ga0209481_102983421	3300027880	Populus Rhizosphere	MKKASWFFWGFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRFDLQTRFTNLFESKLVLAVTNTVLALLAVAFSIFLFLHGRMLVRA
Ga0310888_100712434	3300031538	Soil	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAFVGLVSLVISVPFSGDSLKALLDIPDTPPSSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLLLLAVVFSIFLFLHGRMLVRA
Ga0310813_100885052	3300031716	Soil	MWHETIGGTIFDFRAGLFYGDSQMKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSIVVLYGLNRGWHKRDGYPKFLRRLDLQTRFTNLFENTLVLAVTNTVLALLAVAFSIFLFLHGRMLIRT
Ga0310904_105197152	3300031854	Soil	SWFFWAVVGLVWLVISVPFSGDSLKALLDIPDTPPSSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLVLLAVVFSIFLFLHGRMLVRA
Ga0310891_102428291	3300031913	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVA
Ga0310885_100326671	3300031943	Soil	LFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPYTPPRSQGEMEKLLQNTIYAANFSILSILMLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVFAATNTVLVLLAVVFSIFLFLHGRMLVRA
Ga0310885_100505151	3300031943	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLAL
Ga0310897_100812132	3300032003	Soil	VGSEKRRLPAAGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAFVGLVWLVISVPFSGDSLKALLDIPDTPPSSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLVLLAVVFSIFLFLHGRMLVRA
Ga0310902_104848062	3300032012	Soil	AFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQEELGKLLQNIIYAANFSILSVLVLYGLNRGWHKSDGYPKFLRRLDLQTRFTNLFENKPVLAVTNTVLALLAVAFSIFLFLHGRMLVR
Ga0310899_101652691	3300032017	Soil	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLEIPDTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLVLLAVVFSIFLFLHGRMLVRA
Ga0310890_100201244	3300032075	Soil	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPYTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLVLLAVVFSIFLFLHGRMLVRA
Ga0310895_102841021	3300032122	Soil	MKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPYTPPRSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKLVLAATNTVLVLLAVVFSIFLFLHGRMLVRA
Ga0307470_105968321	3300032174	Hardwood Forest Soil	VRNKVGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAFVGLVWLVISLPFSGDSLKALLDIPDTPPSSQDELGKLLQNIAYAANFSILSILVLFGLNRGWHETDGYPKWLQRLHLQARFTNLFQSKLVLAATNIVLALLALVFSIFLFLHGRMLVRA
Ga0310889_101135073	3300032179	Soil	VGSEKRRLPATGHETIEDTVFDFRAGLFYCDCQMKKASWFFWAVVGLVWLVISVPFSGDSLKALLDIPDTPPSSQGEMEKLLQNTIYAANFSILSILVLYGLNRGWHKSDGYPKFLQRLDLQVRFTNLFENKL
Ga0307471_1036114331	3300032180	Hardwood Forest Soil	MKKASWFFWAFVGLVWLVISVPFSGDSLKALLDIPDTPPSSQDELGKLLQNIAYAANFSILSILVLFGLNRGWHETDGYPKWLQRLHLQARFTNLFQSKLVLAATNTVLALLALVFSIFLFLHGRMLVRA
Ga0310812_100093944	3300032421	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSVIVLYGLNRGWHKRDGYPKFLRRLDLQTRFTNLFENTLVLAVTNTVLALLAVAFSIFLFLHGRMLIRT
Ga0310811_101191362	3300033475	Soil	MKKASWFFWAFVGLVWLVISLPFAGDSLKALLEFPDTPPSSQDELGKLLQNIIYAANFSILSIVVLYGLNRGWHKRDGYPKFLRRLDLQTRFTNLFENTLVLAVTNTVLALLAVAFSIFLFLHGRMLIRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079269

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences