Metagenome Family F079640

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079640
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	77 residues
Representative Sequence	MASTQLRSGSLQTTVTDTGVPNILDGKVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLY
Number of Associated Samples	87
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	92.17 %
% of genes from short scaffolds (< 2000 bps)	85.22 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.261 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.826 % of family members)
Environment Ontology (ENVO)	Unclassified (63.478 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (49.565 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.86% β-sheet: 24.76% Coil/Unstructured: 72.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF11387	DUF2795	12.17
PF02423	OCD_Mu_crystall	1.74
PF01042	Ribonuc_L-PSP	0.87
PF04542	Sigma70_r2	0.87
PF00561	Abhydrolase_1	0.87
PF08044	DUF1707	0.87
PF01695	IstB_IS21	0.87
PF12697	Abhydrolase_6	0.87
PF08223	PaaX_C	0.87
PF00296	Bac_luciferase	0.87
PF13376	OmdA	0.87
PF14417	MEDS	0.87
PF13581	HATPase_c_2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	1.74
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.87
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.87
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.87
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.87
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.87
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.87
COG3327	DNA-binding transcriptional regulator PaaX (phenylacetic acid degradation)	Transcription [K]	0.87
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.26 %
Unclassified	root	N/A	41.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.26 %
Unclassified	root	N/A	41.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.26 %
Unclassified	root	N/A	41.74 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.39 %
Unclassified	root	N/A	41.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.61 %
Unclassified	root	N/A	41.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.74 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6.96 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	6.96 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.48 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.74 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6.96 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	6.09 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.48 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.87 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.74 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6.96 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	6.09 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.48 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.87 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10121768	Not Available	545	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1048368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600	Open in IMG/M
3300004268\|Ga0066398_10099897	Not Available	671	Open in IMG/M
3300005332\|Ga0066388_105726884	Not Available	629	Open in IMG/M
3300005332\|Ga0066388_108820151	Not Available	500	Open in IMG/M
3300005435\|Ga0070714_101919160	Not Available	578	Open in IMG/M
3300005468\|Ga0070707_100150947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2262	Open in IMG/M
3300005471\|Ga0070698_102097813	Not Available	519	Open in IMG/M
3300005518\|Ga0070699_100401485	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300005764\|Ga0066903_108179529	Not Available	535	Open in IMG/M
3300006028\|Ga0070717_10015360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5914	Open in IMG/M
3300006028\|Ga0070717_11862698	Not Available	543	Open in IMG/M
3300006028\|Ga0070717_12045709	Not Available	516	Open in IMG/M
3300007258\|Ga0099793_10384777	All Organisms → cellular organisms → Bacteria → Terrabacteria group	688	Open in IMG/M
3300010046\|Ga0126384_11571112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300010048\|Ga0126373_12439719	Not Available	582	Open in IMG/M
3300010358\|Ga0126370_10592354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	956	Open in IMG/M
3300010361\|Ga0126378_11020030	Not Available	931	Open in IMG/M
3300010361\|Ga0126378_13074025	Not Available	531	Open in IMG/M
3300010373\|Ga0134128_10299194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1802	Open in IMG/M
3300010398\|Ga0126383_10296522	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1612	Open in IMG/M
3300010398\|Ga0126383_10995567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	926	Open in IMG/M
3300010398\|Ga0126383_11457595	All Organisms → cellular organisms → Bacteria → Terrabacteria group	774	Open in IMG/M
3300012210\|Ga0137378_10518867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1099	Open in IMG/M
3300012211\|Ga0137377_11311851	Not Available	654	Open in IMG/M
3300012971\|Ga0126369_10543358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1226	Open in IMG/M
3300012971\|Ga0126369_13599042	Not Available	508	Open in IMG/M
3300016270\|Ga0182036_10774581	All Organisms → cellular organisms → Bacteria → Terrabacteria group	780	Open in IMG/M
3300016294\|Ga0182041_11132702	Not Available	712	Open in IMG/M
3300016341\|Ga0182035_11060525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300016357\|Ga0182032_11873569	Not Available	525	Open in IMG/M
3300016371\|Ga0182034_11857160	Not Available	531	Open in IMG/M
3300016371\|Ga0182034_11949006	Not Available	519	Open in IMG/M
3300016387\|Ga0182040_10170509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1573	Open in IMG/M
3300016422\|Ga0182039_12035182	Not Available	528	Open in IMG/M
3300018001\|Ga0187815_10477962	Not Available	533	Open in IMG/M
3300021560\|Ga0126371_10654822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1199	Open in IMG/M
3300021560\|Ga0126371_11094103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	936	Open in IMG/M
3300021560\|Ga0126371_12164936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	671	Open in IMG/M
3300021560\|Ga0126371_12169538	Not Available	670	Open in IMG/M
3300021560\|Ga0126371_13880260	Not Available	504	Open in IMG/M
3300025915\|Ga0207693_10205882	Not Available	1547	Open in IMG/M
3300026550\|Ga0209474_10072364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2391	Open in IMG/M
3300027076\|Ga0208860_1005999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1053	Open in IMG/M
3300027874\|Ga0209465_10325310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	770	Open in IMG/M
3300031544\|Ga0318534_10046579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2418	Open in IMG/M
3300031544\|Ga0318534_10124437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1482	Open in IMG/M
3300031544\|Ga0318534_10290319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	942	Open in IMG/M
3300031564\|Ga0318573_10137976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1273	Open in IMG/M
3300031564\|Ga0318573_10815852	Not Available	501	Open in IMG/M
3300031572\|Ga0318515_10495734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300031640\|Ga0318555_10257951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	942	Open in IMG/M
3300031680\|Ga0318574_10049930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2197	Open in IMG/M
3300031680\|Ga0318574_10508838	All Organisms → cellular organisms → Bacteria → Terrabacteria group	706	Open in IMG/M
3300031681\|Ga0318572_10358098	All Organisms → cellular organisms → Bacteria → Terrabacteria group	865	Open in IMG/M
3300031681\|Ga0318572_10498613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300031713\|Ga0318496_10229997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1021	Open in IMG/M
3300031719\|Ga0306917_10016541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4428	Open in IMG/M
3300031724\|Ga0318500_10287788	All Organisms → cellular organisms → Bacteria → Terrabacteria group	803	Open in IMG/M
3300031744\|Ga0306918_10210432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1470	Open in IMG/M
3300031748\|Ga0318492_10212312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	993	Open in IMG/M
3300031748\|Ga0318492_10488010	All Organisms → cellular organisms → Bacteria → Terrabacteria group	653	Open in IMG/M
3300031751\|Ga0318494_10549189	Not Available	674	Open in IMG/M
3300031763\|Ga0318537_10038171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1723	Open in IMG/M
3300031764\|Ga0318535_10071755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1482	Open in IMG/M
3300031765\|Ga0318554_10338070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	856	Open in IMG/M
3300031768\|Ga0318509_10629107	Not Available	597	Open in IMG/M
3300031769\|Ga0318526_10395549	Not Available	565	Open in IMG/M
3300031770\|Ga0318521_10615967	All Organisms → cellular organisms → Bacteria → Terrabacteria group	657	Open in IMG/M
3300031771\|Ga0318546_10583187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	786	Open in IMG/M
3300031777\|Ga0318543_10166941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	971	Open in IMG/M
3300031780\|Ga0318508_1193766	Not Available	581	Open in IMG/M
3300031781\|Ga0318547_10530240	All Organisms → cellular organisms → Bacteria → Terrabacteria group	728	Open in IMG/M
3300031781\|Ga0318547_10877729	Not Available	559	Open in IMG/M
3300031792\|Ga0318529_10334387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300031793\|Ga0318548_10310652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	774	Open in IMG/M
3300031794\|Ga0318503_10307249	Not Available	515	Open in IMG/M
3300031798\|Ga0318523_10170965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1083	Open in IMG/M
3300031805\|Ga0318497_10536292	Not Available	656	Open in IMG/M
3300031819\|Ga0318568_10336858	Not Available	938	Open in IMG/M
3300031819\|Ga0318568_10808528	Not Available	581	Open in IMG/M
3300031821\|Ga0318567_10225482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1049	Open in IMG/M
3300031835\|Ga0318517_10452031	Not Available	579	Open in IMG/M
3300031859\|Ga0318527_10483970	Not Available	528	Open in IMG/M
3300031893\|Ga0318536_10355496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	741	Open in IMG/M
3300031910\|Ga0306923_12068565	Not Available	576	Open in IMG/M
3300031912\|Ga0306921_10032356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5844	Open in IMG/M
3300031946\|Ga0310910_11179668	All Organisms → cellular organisms → Bacteria → Terrabacteria group	594	Open in IMG/M
3300031959\|Ga0318530_10007990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3283	Open in IMG/M
3300032001\|Ga0306922_11702414	All Organisms → cellular organisms → Bacteria → Terrabacteria group	624	Open in IMG/M
3300032035\|Ga0310911_10512476	All Organisms → cellular organisms → Bacteria → Terrabacteria group	695	Open in IMG/M
3300032041\|Ga0318549_10087748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1341	Open in IMG/M
3300032041\|Ga0318549_10559705	Not Available	513	Open in IMG/M
3300032042\|Ga0318545_10305809	All Organisms → cellular organisms → Bacteria → Terrabacteria group	572	Open in IMG/M
3300032051\|Ga0318532_10076599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1167	Open in IMG/M
3300032059\|Ga0318533_10643544	All Organisms → cellular organisms → Bacteria → Terrabacteria group	778	Open in IMG/M
3300032060\|Ga0318505_10050659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1778	Open in IMG/M
3300032060\|Ga0318505_10148874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1084	Open in IMG/M
3300032063\|Ga0318504_10490702	Not Available	588	Open in IMG/M
3300032063\|Ga0318504_10498023	All Organisms → cellular organisms → Bacteria → Terrabacteria group	583	Open in IMG/M
3300032066\|Ga0318514_10101038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1463	Open in IMG/M
3300032076\|Ga0306924_12522109	Not Available	515	Open in IMG/M
3300032090\|Ga0318518_10203284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1014	Open in IMG/M
3300032261\|Ga0306920_100084052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4687	Open in IMG/M
3300032261\|Ga0306920_102261808	Not Available	754	Open in IMG/M
3300032261\|Ga0306920_103141584	All Organisms → cellular organisms → Bacteria → Terrabacteria group	620	Open in IMG/M
3300034820\|Ga0373959_0081785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	745	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.13%
Host-Associated	Host-Associated	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.39%
Aquatic	Environmental → Aquatic	1.74%
Plants	Host-Associated → Plants	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.39%
Freshwater	Environmental → Aquatic → Freshwater	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.35%
Loam	Environmental → Terrestrial → Soil → Loam	12.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.22%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.87%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027076	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF012 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_101217681	3300000793	Forest Soil	MASTQLRSGSLQTTVTDTGVSNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVS
AP72_2010_repI_A100DRAFT_10483682	3300000837	Forest Soil	MAIQSGSLQTPATDSLGSPNIVLDGKVTGMDVLDPTENNEKTTLLEVDDEFDVLLSWELDGAATTVVGGYW
Ga0066398_100998971	3300004268	Tropical Forest Soil	MPLQSGSLQTPVTDFAVAGILDGQVTAMDVLDPTENNEKTSLLEVDDEFDVRLTWKLTGAATPVVGG
Ga0066388_1057268841	3300005332	Tropical Forest Soil	MPLESGSLQTPVTDFDVPGILDGKVTGIDVLDPTEKGEKTALLEVDDAFDVVLTWQLSGAATPVLGGYWVVTLYSKNMDGVGSMEG
Ga0066388_1088201511	3300005332	Tropical Forest Soil	MGIHSGSLQTPATDSLGSPNVVLDGKVTGMDVLDPTENDEKTSLLEVDDEFDVLLSWELDGAATTVVGGYWIVSLYSDDIDGVGAMT
Ga0070714_1019191602	3300005435	Agricultural Soil	MASTQLRSGSLQTTVTDAGVGNILDGQVTGLDVLDPTEKNEKTSLLEVDDEFDVVLSWQLTGNSTPVVGGSWIVALYSDDMDGQGLMNGLIAGPDIVSI
Ga0070707_1001509471	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MASTQLRSGSLQTTVTDAGVSDILDGQVTGLDVLDPTEKSEKTSLLEVDDEFDVVLSWQL
Ga0070698_1020978132	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSLESGSLQTPVTDFNVSGILDGKVTGIDTYDPSEKGEKTALLEVDDPFDCEVTWELDGAATPVVGGSWVVSLYSK
Ga0070699_1004014853	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPNQLRSGALQTPATDFNAPAILAGKVTGLKVLDPTEHKERTSLLEVNDEFDVQLTWELTGAATPVLGGS
Ga0066903_1081795291	3300005764	Tropical Forest Soil	MASTQLRSGSLQTTVTDTGVPNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVG
Ga0070717_1001536010	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPNQLRSGALQTPATDFNAPAILAGKVTGLKVLDPTEHKERTSLLEVNDEFDVQLTWELTGAATPVLGGSWVVTLYSDDM
Ga0070717_118626981	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPLQSGSLQTPVTDFGISGILDGQVTAMDVLDPTENNEKTALLEVDDEFDVQLSWQLTGAATPIVGGYWVV
Ga0070717_120457091	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLQSGSLQTPVTDFNVPGILDGQVTGMDVLDPTENNEKTSLLEADDEFDVLLSWQLTGAATPVVGGYWVVSLYSDDMDG
Ga0099793_103847771	3300007258	Vadose Zone Soil	MSLQSGSLQTPVTDFNVPGILDAQVTAMDVLDPTENDERIGLLEVDDEFDVVLTWQLTGAATPVVGGSWIVSLFSNDMDG
Ga0126384_115711121	3300010046	Tropical Forest Soil	MPLQSGSLQTTVTDTGVPNILDGQVTGMDVLDPTENDEKTSLLEDDDEFDVLLSWQLTGNSTPAVGGYWIV
Ga0126373_118965741	3300010048	Tropical Forest Soil	VGNILDGQVTGLDVLDPTENNEKTSLLEVDDEFDVVLSWQLTGNSTPVVGGSWIVALYSDDIDGQGQMTGL
Ga0126373_124397191	3300010048	Tropical Forest Soil	MAPTQLRSGALQTTVTDTGVTGILDGQVTGLDVLDPTENEQTSLLEVDDEFDVVLSWELTGDSTPVVGGYWIVSLYSDDM
Ga0126370_105923541	3300010358	Tropical Forest Soil	MALESGSLQTPVTDFNVPGILDGNVTSMDVLDPTENNEKTSLLEVDDEFDVRLAWKLTGAATPVVGGSWVVSLYSDD
Ga0126378_110200301	3300010361	Tropical Forest Soil	MASTQLRSGSLQTTVTDTGVGNILDGKVTGLDVLDPTEKNEKTSLLEVDDEFDVVLSWELTGNSTPVVGGSWIVALYSDDMDGQALMTGLIAGPDIVPITG
Ga0126378_130740251	3300010361	Tropical Forest Soil	MASTQLRSGSLQTTVTDTGVTNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDG
Ga0134128_102991941	3300010373	Terrestrial Soil	MPNQLRSGALETPVTDFHTHGILDGKVTGLKVLDPTEHKEKTSLLEVDDPFDVQLSWELTGAATTVTGGSWVVTLYSNDIDGVGQMTGPI
Ga0126383_102965221	3300010398	Tropical Forest Soil	MAPTQLRSGALQTTVTDTGVTGILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGDSTPVVGGYWIVSLYSDDMDGQGLMTGLIAGPD
Ga0126383_109955672	3300010398	Tropical Forest Soil	MGIHSGSLQTPATDSLGSPNVVLDGKVTGMDVLDPTENDEKTSLLEVDDEFDVLLSWELDGAATTVVGGYWIVSLYSDD
Ga0126383_114575952	3300010398	Tropical Forest Soil	MSLQSGSLQTPASDFNVTGILDGQVMSMDVLDPTENDEKTSLLEVDDEFDVLLTWELTGAATPVVGGFWVVSLYSHDQDGVGAM
Ga0137388_105379813	3300012189	Vadose Zone Soil	MSLQSGSLQTPVTDFNVPGILDGQVTAMDVLDPTENDERIGLLEADDEFDVVLTWQLTGAAT
Ga0137378_105188672	3300012210	Vadose Zone Soil	MAATQLRSGSLQTTVTDTGVSNILDGQVTGLDVLDPTENNEKTSLLEVDDEFDVHLTWQLSGAATPVVGGSWVVTLY
Ga0137377_113118511	3300012211	Vadose Zone Soil	MASTQLRSGSLQTTVTDAGVSDILDGQVTGLDVLDPTERNEKTSLLEVDDEFDVVLSWQLTGNSTPVVGGSWIVALYSDDM
Ga0126369_105433581	3300012971	Tropical Forest Soil	MPNQLRSGALETPVTDFHTPGILDGNVTGLKVLDPTEHKEKTSLLEVNDPFDVQVSWELTGAATTVAGGSWVVTLYS
Ga0126369_135990421	3300012971	Tropical Forest Soil	MSLESGALQTPVTDFKVHGILDGKVKSIAVLDPTEKNERTALLEADDEFDVRIAWELSGAATTVVGGHWVVSL
Ga0182036_107745811	3300016270	Soil	MASTQLRSGALQTTVTDTGVTNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQ
Ga0182041_111327022	3300016294	Soil	MLQSGSLQTTMTDSGLPGFLDGQVTGMDVLDPTEGNEKTSLLEDDDEFDVQLTWQLTGSSTPVVGGSWVVALYSDDIDGVG
Ga0182035_110605252	3300016341	Soil	MALESGALQTPVTDFNVLGILDGKVTSMAVLDPTENNEKTSLLEVDDEFDVILSWELTGNSTPVVGGYWIVS
Ga0182032_118735691	3300016357	Soil	MASTQLRSGSLQTTVTDTGVPNILDGLVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSD
Ga0182034_118571602	3300016371	Soil	MLQSGSLQTTMTDSGLSGYLDGQVTGMDVLDPTEGNEKTSLLEDDDEFDVQLTWQLIGSSTPVVGGTWIVALYS
Ga0182034_119490061	3300016371	Soil	MPNQLRSGALQTPATDFDAPAILAGKVTGLKVLDPTEHNERTSLLEVNDEFDVQLTWELTGAATPVIGGSWVVTL
Ga0182040_101705094	3300016387	Soil	MASTQLRSGSLQTTVTDTGVPKILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQGLM
Ga0182039_120351821	3300016422	Soil	MASTQLRSGSLQTTVTDTGVGNILDGTVTGLDVLDPTEKNEKTSLLEVDDEFDVVLSWELTGNSTPVVGGSWIVALYSDDMDGQALMTGL
Ga0187820_12011332	3300017924	Freshwater Sediment	MLQSGSLQTTMTDSGLSGYLDGQVTSMDVLDPTEGNERTSLLEDDDEFDVQLTWRLTGSSTPVVGGTWIV
Ga0187815_104779621	3300018001	Freshwater Sediment	MASTQLRSGSLQTTVTDAGVSNILDGQVTGLDVLDPTEKNEKTSLLEVDDEFDVVLSWQLTGNSTPVVGGSWIVALYSDDMDGQGLMNGLIA
Ga0126371_106548221	3300021560	Tropical Forest Soil	MASTQLRSGSLQTTVTDTGVTNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQGLMTGL
Ga0126371_110941032	3300021560	Tropical Forest Soil	MSIQSGSLQTPATDALGQPNVVLDGKVTGMDVLDPTENDEKTTLLEVDDEFDVVLSWELDGAATTVVGGYWIVSLYSDDMDGV
Ga0126371_121649361	3300021560	Tropical Forest Soil	MAIQSGSLQTPATDSLGSPNIVLDGKVTGMDVLDPTENNEKTTLLEVDDEFDVLLSWELDGAATTVVGGYWI
Ga0126371_121695381	3300021560	Tropical Forest Soil	MSLESSALQTPATDFEIHGILDGKVNSMVVRDPTEKNEQTALLESDDEFDVRLRWELSGAATTVVG
Ga0126371_138802601	3300021560	Tropical Forest Soil	MASTQLRSGSLQTTVTDTGVGNILDGQVTGLDVLDPTEKNEKTSLLEVDDEFDVVLRWELTGNSTPVVGGSWIVA
Ga0207693_102058821	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MASTQLRSGSLQTTVTDAGVGNILDGQVTGLDVLDPTEKNEKTSLLEVDDEFDVVLSWQLTGNSTPVVGGSWIVALYSDDMDGQGLMTGLIAGPDIVPITG
Ga0209474_100723644	3300026550	Soil	MASAQLRSGSLQTTVTDTGVGDILDGQVTGLDVLDPTEKKEKTSLLEVDDEFDVVLSWELTGNSTPVVGGSWIVALYSDDI
Ga0208860_10059991	3300027076	Forest Soil	MSLLSSALQTPATDFGVTGILDGQVTGMDVLDPTENEKISLLETDDEFDVVLSWQLTGAATPVVGGSWIVTLYSDDMDGV
Ga0209465_103253102	3300027874	Tropical Forest Soil	MGIHSGSLQTPATDSLGSPNVVLDGKVTGMDVLDPTENDEKTSLLEVDDEFDVLLSWELDGAATTVVGGYWIVSLY
Ga0318534_100465794	3300031544	Soil	MASTQLRSGSLQTTVTDTGVPKILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQG
Ga0318534_101244371	3300031544	Soil	VTLLSGSLQTPATDTLGSPNAVLDGKVTGMDVLDPTENNEKTSLLEVDDEFDVQVTWELDGAATTVLGGSW
Ga0318534_102903192	3300031544	Soil	MASTQLRSGSLQTTVTDTGVPNILDGKVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYW
Ga0318573_101379761	3300031564	Soil	MASTQLRSGALQTTVTDTGVTNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDM
Ga0318573_108158521	3300031564	Soil	MLQSGSLQTTMTDSGLSGYLDGQVTGMDVLDPTEGNEKTSLLEDDDEFDVQLTWQLTGSSTPVVGGKWIVALYSDDIDGVG
Ga0318515_104957341	3300031572	Soil	MALESGALQTPVTDFNVLGILDGKVTSMAVLDPTENNEKTSLLEVDDEFDVRLKWELSGAATPILGGYWVVTLY
Ga0318555_102579512	3300031640	Soil	MASTQLRSGSLQTTVTDTGVPNILDGKVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYCD
Ga0318574_100487831	3300031680	Soil	MALESGALQTPVTDFNVLGILDGKVTSMAVLDPTENNEKTSLLEVDDEFDVRLKWELSGAAT
Ga0318574_100499301	3300031680	Soil	MASTQLRSGSLQTTVTDTGVPKILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQGLMT
Ga0318574_105088382	3300031680	Soil	MGMQSGSLQTPATDSLGHPNVVLDGNVTAMEVLDPTENNEKTSLLEVDDEFDVQLSWELDGAATTVVGGYWIVSL
Ga0318572_103580982	3300031681	Soil	MASTQLRSGSLQTTVTDTGVPNILDGLVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVV
Ga0318572_104986131	3300031681	Soil	MALESGALQTPVTDFNVLGILDGKVTSMAVLDPTENNEKTSLLEVDDEFDVRLKWELSGAATPILGGYWVVTLYSK
Ga0318496_102299973	3300031713	Soil	MASTQLRSGALQTTVTDTGVTNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSD
Ga0306917_100165416	3300031719	Soil	MASTQLRSGSLQTTVTDTGVPKILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSL
Ga0318500_102877881	3300031724	Soil	MASTQLRSGSLQTTVTDTGVGNILDGTVTGLDVLDPTEKNEKTSLLEVDDEFDVVLSWELTGNSTPVVGGSWIVALYSDDMD
Ga0306918_102104323	3300031744	Soil	MAIQSGSLQTPATDALGSPNAILDGKVTGMDVLDPTENNEKTSLLEVDDEFDVLLTWELDGVATPVVGGYWIVSLYSDDMDGVGQMTGL
Ga0318492_102123122	3300031748	Soil	MASTQLRSGSLQTTVTDTGVPNILDGKVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVV
Ga0318492_104880102	3300031748	Soil	MASQLRSGSLQTTVTDTGQPNILDGHVTGLHVLDPTENNEQTSLLEVDDEFDVVLSWKLTGNSTPVVGGYWIVALYSDDIDGQGLM
Ga0318494_105491891	3300031751	Soil	MLQSGSLQTTMTDSGLSGYLDGQVTGMDVLDPTEGNEKTSLLEDDDEFDVQLTWQLTGSSTPVVGGKWIVALYSDDID
Ga0318537_100381713	3300031763	Soil	MASTQLRSGSLQTTVTDTGVPNILDGLVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQGLMTGLIAGP
Ga0318535_100717551	3300031764	Soil	MLQSGSLQTTMTDSGLSGYLDGQVTGMDVLDPTEGNERTSLLEDDDEFDVQLTWQLTGSSTPVVGGTWIVALYSDDIDGVGPMTGL
Ga0318554_103380702	3300031765	Soil	MASQLRSGSLQTTVTDTGQPNILDGHVTGLHVLDPTENNEQTSLLEVDDEFDVVLSWKLTGNSTPVVGGYWIVALYSDDIDGQGLMTGLIAGPDQVSI
Ga0318509_106291071	3300031768	Soil	MAIQSGSLQTPATDALGSPNAILDGKVTGMDVLDPTENNEKTSLLEVDDEFDVLLTWELDGVATPVVGGYWIVSLYSDDMDGVG
Ga0318526_103955492	3300031769	Soil	MPNQLRSGAMETPVTDFHVHGILEGKVTGLKVLDPTEHKEKTSLLEVNDPFDVQLTWELDGAATTSTAWD
Ga0318521_106159672	3300031770	Soil	MASQLRSGSLQTTVTDTGQPNILDGHVTGLHVLDPTENNEQTSLLEVDDEFDVVLSWKLTGNSTPVVGGYWIVALYSDDIDGQGL
Ga0318546_105831871	3300031771	Soil	MASTQLRSGSLQTTVTDTGVPNILDGKVTGLDVLDPTENNEQTSLLEVDDEFDVVLSW
Ga0318543_101669411	3300031777	Soil	VTLLSGSLQTPATDTLGSPNAVLDGKVTGMDVLDPTENNEKTSLLEVDDEFDVQVTWELDGAATTVLGGSWVVSLYSD
Ga0318508_11937661	3300031780	Soil	MASTQLRSGSLQTTVTDTGVPNILDGKVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLY
Ga0318547_105302402	3300031781	Soil	MPMQSGSLQTPATDSLGSPNVVLDGKVTAMDVLDPTEKDEKTSLLEVDDEFDVVLSWELDGAATTVVGGYWIVSLYSDDI
Ga0318547_108777291	3300031781	Soil	VTLLSGSLQTPATDTLGSPNAVLDGKVTGMDVLDPTENNEKTSLLEVDDEFDVQVTWELDGAATTVLGGSWVVSLYSDD
Ga0318529_103343871	3300031792	Soil	MASTQLRSGALQTTVTDTGVTNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWEL
Ga0318548_103106521	3300031793	Soil	MASTQLRSGSLQTTVTDTGVPNILDGKVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGG
Ga0318503_103072491	3300031794	Soil	VTLLSGSLQTPATDTLGSPNAVLDGKVTGMDVLDPTENNEKTSLLEVDDEFDVQVTWELDGAATTVLGGSWV
Ga0318557_101796243	3300031795	Soil	MTTQLRSGSLQTTVTDTGVSGILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGSSTPVVGG
Ga0318523_101709653	3300031798	Soil	MPLESSALQTPVTDFKVHGILDGKVKSMVVLDPTEKNEKTALLEGDDEFDVRLRWELDGAATTVVGGYWVVSLYSK
Ga0318497_105362922	3300031805	Soil	MLQSGSLQTTMTDSGLPGFLDGQVTGMDVLDPTEGNEKTSLLEDDDEFDVQLTWQLTGSSTPVVGGSW
Ga0318568_103368581	3300031819	Soil	MLQSGSLQTTMTDSGLSGYLDGQVTGMDVLDPTEGNEKTSLLEDDDEFDVQLTWQLTGSSTPVVGGKWIVALYSDDIDGVGAMTGLI
Ga0318568_108085281	3300031819	Soil	MASTQLRSGSLQTTVTDTGVLNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQG
Ga0318567_102254823	3300031821	Soil	MASTQLRSGALQTTVTDTGVTNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYW
Ga0318517_104520311	3300031835	Soil	MASTQLRSGSLQTTVTDTGVPNILDGLVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQG
Ga0318527_104839701	3300031859	Soil	MALESGALQTPVTDFNVLGILDGKVTSMAVLDPTENNEKTSLLEVDDEFDVRLKWELSGAATPILGGYWVVTLYS
Ga0318536_103554961	3300031893	Soil	MASTQLRSGSLQTTVTDTGVPNILDGKVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPV
Ga0306923_120685651	3300031910	Soil	MGMQSGSLQTPATDSLGHPNVVLDGNVTAMEVLDPTENNEKTSLLEVDDEFDVVLSWQLTGNSTPVVGGSWIVALYSDDID
Ga0306921_100323567	3300031912	Soil	MASTQLRSGALQTTVTDTGVTNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQG
Ga0310910_111796682	3300031946	Soil	MASTQLRSGALQTTVTDTGVTNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWI
Ga0318530_100079904	3300031959	Soil	MASTQLRSGSLQTTVTDTGVPKILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQ
Ga0306922_117024141	3300032001	Soil	MPSTQLRSGSLQTTVTDTGVPNILDGEVTGLDVLDPTENNEKTSLLEVDDEFDVVLTWQLTGSSTPVVGGSWIVS
Ga0310911_105124762	3300032035	Soil	MASTQLRSGSLQTTVTDTGVPNILDGKVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQGLMTGLIAGPDKIQF
Ga0318549_100877481	3300032041	Soil	MLQSGSLQTTMTDSGLSGYLDGQVTGMDVLDPTEGNEKTSLLEDDDEFDVQLTWQLTGSSTPVVGGSWVVALYSDDIDGVGAMTG
Ga0318549_105597051	3300032041	Soil	MASTQLRSGSLQTTVTDTGVPNILDGKVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDM
Ga0318545_103058092	3300032042	Soil	MASTQLRSGSLQTTVTDTGVPNILDGLVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWEL
Ga0318532_100765993	3300032051	Soil	MASTQLRSGSLQTTVTDTGVPKILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVALY
Ga0318533_106435442	3300032059	Soil	MASTQLRSGSLQTTVTDTGVGNILDGTVTGLDVLDPTEKNEKTSLLEVDDEFDVVLSWELTGNSTPVVGGSW
Ga0318505_100506594	3300032060	Soil	MTTQLRSGSLQTTVTDTGVSGILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGSSTPVVGGYWIV
Ga0318505_101488741	3300032060	Soil	MALESGALQTPVTDFNVLGILDGKVTSMAVLDPTENNEKTSLLEVDDEFDVKLTWKLTGAATPVVGGSWVVSLYS
Ga0318504_104907021	3300032063	Soil	MASTQLRSGALQTTVTDTGVTNILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVSLYSDDMDGQGLMTGLIAGPDKIQ
Ga0318504_104980231	3300032063	Soil	MASTQLRSGSLQTTVTDTGVPKILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGGYWIVAL
Ga0318514_101010383	3300032066	Soil	MASTQLRSGSLQTTVTDTGVPKILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGNSTPVVGDSLI
Ga0306924_125221091	3300032076	Soil	MLQSGSLQTTMTDSGLSGYLDGQVTGMDVLDPTEGNEKTSLLEDDDEFDVQLTWQLTGSSTPVVGGKWIVALYSDDIDGVGAM
Ga0318518_102032843	3300032090	Soil	MASTQLRSGSLQTTVTDTGVPNILDGLVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWE
Ga0318577_100668701	3300032091	Soil	MLQSGSLQTTMTDSGLSGYLDGQVTGMDVLDPTEGNERTSLLEDDDEFDVQLTWQLTGSSTPVVGGTWIVA
Ga0306920_1000840525	3300032261	Soil	MASTQLRSGSLQTTVTDTGVPNILDGKVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTG
Ga0306920_1019098161	3300032261	Soil	MTTQLRSGSLQTTVTDTGVSGILDGQVTGLDVLDPTENNEQTSLLEVDDEFDVVLSWELTGSSTPV
Ga0306920_1022618081	3300032261	Soil	MLQSGSLQTTMTDSGLPGFLDGQVTGMDVLDPTEGNEKTSLLEDDDEFDVQLTWQLTGSSTPVVGGSWVVALYSDDI
Ga0306920_1031415841	3300032261	Soil	MPSTQLRSGSLQTTVTDTGVPNILDGEVTGLDVLDPTENNEKTSLLEVDDEFDVVLTWQLTGSST
Ga0335077_119691171	3300033158	Soil	MLQSGSLQTTMTDSGLSGYLDGQVTGMDVLDPTEGNERTSLLEDDDEFDVQLTWQLTGSSTPVVGGT
Ga0373959_0081785_3_218	3300034820	Rhizosphere Soil	VTDFAVAGILDGQVTAMDVLDPTENNEKTSLLEVDDEFDVRLTWKLTGAATPVVGGSWVVSLYSDDMDGIGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079640

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences