NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F079669

Metagenome / Metatranscriptome Family F079669

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079669
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 88 residues
Representative Sequence VAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTA
Number of Associated Samples 105
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 99.05 %
% of genes near scaffold ends (potentially truncated) 84.35 %
% of genes from short scaffolds (< 2000 bps) 91.30 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (68.696 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil
(28.696 % of family members)
Environment Ontology (ENVO) Unclassified
(28.696 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.609 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.81%    β-sheet: 0.00%    Coil/Unstructured: 85.19%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A68.70 %
All OrganismsrootAll Organisms31.30 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004785|Ga0058858_1008771Not Available716Open in IMG/M
3300004798|Ga0058859_10080519Not Available735Open in IMG/M
3300006934|Ga0080680_1250055All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium756Open in IMG/M
3300006937|Ga0081243_1412107All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium749Open in IMG/M
3300007219|Ga0075025_1028271All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium811Open in IMG/M
3300007219|Ga0075025_1064520All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium542Open in IMG/M
3300007219|Ga0075025_1064805Not Available544Open in IMG/M
3300009243|Ga0103860_10048980Not Available836Open in IMG/M
3300009247|Ga0103861_10024893Not Available836Open in IMG/M
3300010060|Ga0127425_134429Not Available643Open in IMG/M
3300010060|Ga0127425_139120All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium679Open in IMG/M
3300010062|Ga0127426_126921All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium753Open in IMG/M
3300010064|Ga0127433_127362All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium747Open in IMG/M
3300010066|Ga0127427_139954All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium791Open in IMG/M
3300010067|Ga0127432_149123All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium523Open in IMG/M
3300010072|Ga0127428_162442All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium709Open in IMG/M
3300010073|Ga0127429_132659All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium629Open in IMG/M
3300010075|Ga0127434_160782All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium687Open in IMG/M
3300010076|Ga0127430_134539Not Available590Open in IMG/M
3300010078|Ga0127487_162479All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium803Open in IMG/M
3300010080|Ga0127448_138786Not Available624Open in IMG/M
3300010082|Ga0127469_148607All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium691Open in IMG/M
3300010084|Ga0127461_1007611Not Available808Open in IMG/M
3300010085|Ga0127445_1006048Not Available693Open in IMG/M
3300010089|Ga0127454_1075268All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium765Open in IMG/M
3300010098|Ga0127463_1002915Not Available718Open in IMG/M
3300010110|Ga0126316_1127652All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium813Open in IMG/M
3300010111|Ga0127491_1109672All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium764Open in IMG/M
3300010122|Ga0127488_1072025Not Available699Open in IMG/M
3300010403|Ga0134123_12209721All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium612Open in IMG/M
3300010861|Ga0126349_1038597Not Available758Open in IMG/M
3300011033|Ga0138552_116447Not Available501Open in IMG/M
3300011084|Ga0138562_1120976Not Available797Open in IMG/M
3300011088|Ga0138576_1226672Not Available762Open in IMG/M
3300011282|Ga0138293_117154All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium718Open in IMG/M
3300011340|Ga0151652_12896835Not Available669Open in IMG/M
3300012371|Ga0134022_1120544Not Available644Open in IMG/M
3300012371|Ga0134022_1188351All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium685Open in IMG/M
3300012373|Ga0134042_1138689Not Available683Open in IMG/M
3300012377|Ga0134029_1172026All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium584Open in IMG/M
3300012379|Ga0134058_1012206Not Available505Open in IMG/M
3300012387|Ga0134030_1062954Not Available698Open in IMG/M
3300012387|Ga0134030_1247025All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium760Open in IMG/M
3300012388|Ga0134031_1073230Not Available808Open in IMG/M
3300012390|Ga0134054_1013770All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium790Open in IMG/M
3300012397|Ga0134056_1114331Not Available632Open in IMG/M
3300012403|Ga0134049_1261151Not Available740Open in IMG/M
3300012406|Ga0134053_1342624All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium798Open in IMG/M
3300012971|Ga0126369_12117597Not Available650Open in IMG/M
3300013052|Ga0154014_131628Not Available799Open in IMG/M
3300015371|Ga0132258_11472391Not Available1720Open in IMG/M
3300019199|Ga0187789_1240706Not Available763Open in IMG/M
3300019199|Ga0187789_1316989Not Available532Open in IMG/M
3300019228|Ga0180119_1268759Not Available657Open in IMG/M
3300019233|Ga0184645_1105087Not Available648Open in IMG/M
3300019238|Ga0180112_1031011Not Available755Open in IMG/M
3300019245|Ga0187791_1021242Not Available716Open in IMG/M
3300019248|Ga0180117_1377922Not Available751Open in IMG/M
3300019250|Ga0187790_1096439Not Available752Open in IMG/M
3300019264|Ga0187796_1498141Not Available512Open in IMG/M
3300019269|Ga0184644_1382635All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium743Open in IMG/M
3300019270|Ga0181512_1074579Not Available541Open in IMG/M
3300019273|Ga0187794_1318950Not Available717Open in IMG/M
3300020067|Ga0180109_1061927Not Available754Open in IMG/M
3300020070|Ga0206356_10819329Not Available683Open in IMG/M
3300020077|Ga0206351_10951781Not Available751Open in IMG/M
3300020078|Ga0206352_10281412Not Available759Open in IMG/M
3300020610|Ga0154015_1590212Not Available607Open in IMG/M
3300021269|Ga0210356_173845Not Available715Open in IMG/M
3300021286|Ga0179583_1023730Not Available746Open in IMG/M
3300021299|Ga0210302_1082215All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium767Open in IMG/M
3300021857|Ga0213849_1108544All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium747Open in IMG/M
3300021861|Ga0213853_10901913All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium742Open in IMG/M
3300021947|Ga0213856_1053702Not Available554Open in IMG/M
3300022171|Ga0213857_1014385All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium801Open in IMG/M
3300022195|Ga0222625_1009683Not Available719Open in IMG/M
3300022720|Ga0242672_1030082Not Available816Open in IMG/M
3300023703|Ga0228708_1056671Not Available588Open in IMG/M
3300024574|Ga0255275_1114734Not Available735Open in IMG/M
3300025940|Ga0207691_10659699Not Available884Open in IMG/M
3300030829|Ga0308203_1027233All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium779Open in IMG/M
3300030902|Ga0308202_1044033Not Available799Open in IMG/M
3300030904|Ga0308198_1027058All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium801Open in IMG/M
3300030905|Ga0308200_1117131Not Available584Open in IMG/M
3300030987|Ga0308155_1008663Not Available793Open in IMG/M
3300030989|Ga0308196_1016670Not Available822Open in IMG/M
3300031058|Ga0308189_10201263Not Available722Open in IMG/M
3300031082|Ga0308192_1024742Not Available801Open in IMG/M
3300031094|Ga0308199_1052776All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium799Open in IMG/M
3300031125|Ga0308182_1007558Not Available793Open in IMG/M
3300031125|Ga0308182_1024329Not Available532Open in IMG/M
3300032256|Ga0315271_11281012All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium633Open in IMG/M
3300034363|Ga0326787_029707Not Available755Open in IMG/M
3300034448|Ga0370540_03330Not Available813Open in IMG/M
3300034643|Ga0370545_059268All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium762Open in IMG/M
3300034644|Ga0370548_040149Not Available801Open in IMG/M
3300034661|Ga0314782_047024Not Available847Open in IMG/M
3300034665|Ga0314787_066541Not Available619Open in IMG/M
3300034666|Ga0314788_055908Not Available792Open in IMG/M
3300034666|Ga0314788_084111All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium691Open in IMG/M
3300034668|Ga0314793_041838Not Available811Open in IMG/M
3300034670|Ga0314795_113926All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium555Open in IMG/M
3300034672|Ga0314797_047656Not Available770Open in IMG/M
3300034678|Ga0314803_024356Not Available922Open in IMG/M
3300034678|Ga0314803_046631Not Available738Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil28.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.83%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds6.96%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment6.09%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland5.22%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere4.35%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.61%
River WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water1.74%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.74%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.74%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated1.74%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil1.74%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.87%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.87%
WetlandEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland0.87%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.87%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.87%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater0.87%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.87%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.87%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.87%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004785Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300004798Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300006934Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A1 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300006937Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A01 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300007219Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaT_SC_2013 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009243Microbial communities of water from Amazon river, Brazil - RCM13EnvironmentalOpen in IMG/M
3300009247Microbial communities of water from Amazon river, Brazil - RCM14EnvironmentalOpen in IMG/M
3300010060Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010062Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010064Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010066Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010067Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010072Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010073Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010075Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010076Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010078Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010080Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010082Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010084Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010085Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010089Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010093Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010098Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010110Soil microbial communities from Illinois, USA to study soil gas exchange rates - BV-IL-AGR metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010111Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010122Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010861Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011033Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 33 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011084Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011088Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011282Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaT_SC_2012 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011340Combined Assembly of Wetland MetatranscriptomesEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012371Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012372Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012373Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012377Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012379Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012387Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012388Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012390Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012406Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013052Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300019199Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019228Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019233Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019238Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019245Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019248Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019250Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019264Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019270Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019273Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020067Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020077Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020610Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021269Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.499 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021286Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021299Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1034 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021857Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - WE:C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021947Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - G-2016_32 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022171Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_45 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022720Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023703Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024574Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030904Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030969Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030987Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030989Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030998Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031082Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031125Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300034363Metatranscriptome of soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - S96 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300034448Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_115 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034643Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034661Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034665Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034666Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034668Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034670Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034672Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034678Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058858_100877123300004785Host-AssociatedVSERQPESEEARPVASGERAAKSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSVGKLAA
Ga0058859_1008051913300004798Host-AssociatedVARGKRAAKSRGRPCAKWSRRDDENHRRVLAWLAGRWRNHQSKRAEKPHSIIQSREALDGPATRPITPLAVENGVGKLAA
Ga0080680_125005513300006934Tropical Rainforest SoilVAPGERTVKSRGRPGAKWSRRGNKVADVSLTWFASRWRNHQPKRAEKPHSTIQCRKTLDGPATRPITPLAVENSVGKLTA
Ga0081243_141210713300006937Tropical Rainforest SoilVAPGERTVKSRGRPGAKWSRRGNKVADVSLTWFASRWRNHQPKRAEKPHSTIQCRKTLDGPATRPITPLAVENGVGK
Ga0075025_102827113300007219WatershedsVASGERAARSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSVGKLAAPARVRA*
Ga0075025_106452013300007219WatershedsVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRCRKHQPKRAEKPHSTIQRRKTLDGPATRPITPLAVENSVGKLAASARTAPNVSSGKRAWRTPI
Ga0075025_106480513300007219WatershedsVAPGQRTAKSRGRPGAKWSRRGNKVINVSLTWFASRWRNHQPKRAEKPHSTIQRRKTLDGPATRPTTPLAVENSVGKLTAPARAAPNVSAGKREWRTPIP
Ga0103860_1004898013300009243River WaterVARGERAAKSRGRPCAKWWRRGENHRRVFTWLAGRWRNHQSKRAEKPHSIIQRREALNGPATRPITPLAVENGVGKPAALERGAPNAGMGKRAWRTPTAHFRARWSQDW
Ga0103861_1002489313300009247River WaterVARGERAAKSRGRPCAKWWRRGENHRRVFTWLAGRWRNHQSKRAEKPHSIIQRREALNGPATRPITPLAVENGVGKPAALERGAPNAGMGKRAWRTPTAHFRARWSQ
Ga0127425_13442913300010060Grasslands SoilVASGERAAKSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSVGKLAA
Ga0127425_13912013300010060Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREW
Ga0127426_12692113300010062Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTA
Ga0127433_12736213300010064Grasslands SoilVASGERAAKSRGRPEANRSRRGDEVINVSLTWFASRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSVGKLAA
Ga0127427_13995413300010066Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGK
Ga0127432_14912313300010067Grasslands SoilVAPGQRTVKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTA
Ga0127428_16244213300010072Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKL
Ga0127429_13265913300010073Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENS
Ga0127434_16078223300010075Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREWRTP
Ga0127430_13453913300010076Grasslands SoilVASGERAARSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSVGKLAA
Ga0127487_16247913300010078Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREWRTPIP
Ga0127448_13878613300010080Grasslands SoilVASGERAARSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENS
Ga0127469_14860723300010082Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREWRTPI
Ga0127461_100761113300010084Grasslands SoilVASGERAAKSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSVGKLAAPARVRA*
Ga0127445_100604813300010085Grasslands SoilVASGERAAKSGGRPESQWLRRERKNHRRVLTWFVSRWRNHQPKRAEKPHSKSVQRKLADGPATRPKTPLAVENSVGNPAA
Ga0127454_107526813300010089Grasslands SoilVASGERAAKSGGRPESQWLRRERKNHRRVLTWFASRWRNHQPKRAEKPHSKSVQRKLTDGPATRPKTPLAVENSVGNPAASEKSAPNA
Ga0127490_107766713300010093Grasslands SoilVAPGQRTVRSSGRPGAKWSRGGKKSHSRVLTWLASRWRNHRLKRAKKPHSKIQLSPQNGRLDGPATRPKRTPLAVENSVGKLAAPEM
Ga0127463_100291513300010098Grasslands SoilVASGERAAKSRGRPEANRSRRGDEVTNVSLTWFASRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSV
Ga0126316_112765213300010110SoilVAPGQRAAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSIIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREWRTPI
Ga0127491_110967213300010111Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREWR
Ga0127488_107202513300010122Grasslands SoilVASGERAAKSRGRPEANRSRRGDEVINVSLTWFASRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSV
Ga0134123_1220972113300010403Terrestrial SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFVSRWRNHQPKRAEKPHSTIQCRKTLDGPATRPKTPLAVENS
Ga0126349_103859713300010861Boreal Forest SoilVARGERTDKIRGGPCAKRSRRDHENHRRVLAWFAGRWRNHQSKRAEKPHSIIQHREMLDGPATRPKTPLAVENSVGKPAAP
Ga0138552_11644713300011033Peatlands SoilVAPGQRAAKSCGRPGAKWSRRGQSSRRRVLAWFANRCRKHQSKRAEKPHSIIQRRKALDGPATRPQTPLAVENSVGKLATNQVPNASAGKRAW
Ga0138562_112097613300011084Peatlands SoilVAPGQRAAKSCGRPGAKWSRRGQSSRRRVLAWFANRCRKHQSKRAEKPHSIIQRRKALDGPATRPQTPLVVENSVGKLAAPPCEAPNASVGKRAWRT
Ga0138576_122667213300011088Peatlands SoilVAPGQRAAKSCGRPGAKWSRRGQSSRRRVLAWFANRCRKHQSKRAEKPHSIIQRRKALDGPATRPQTPLAVENSVVKLAAPPCEAPNASVGKRAW
Ga0138293_11715413300011282WatershedsVASGERAAKSRGRPEANRSRRGDEVINVSLTWFASRWRNHQPKRAEKPHSTIQCREALDGPATRPETP
Ga0151652_1289683513300011340WetlandVASGERAAKSGGRPGVKRSRREKSYRRRVLTWFASRWRNHRPKRAEKPHSKFSDRKALDGPATRPITPLAVENGVG
Ga0150985_10175507913300012212Avena Fatua RhizosphereVALGQRIAKSDGRPSAKWSRRGDESHSRVLTWFASRWRNHQPKRAERPHSKSSRRNPLDGPAMRPVTPLAVENGVGKLAANFVGAKCQRGKESLAHSHPP
Ga0134022_112054413300012371Grasslands SoilVALGQRTVRSSGRPGAKWSRGGKKSHSRVLTWLASRWRNHRLKRAKKPHSKIQLSPQNGRLDGPATRPKRTPLAVENSVGKL
Ga0134022_118835123300012371Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREWRT
Ga0134037_118723513300012372Grasslands SoilVAPGQRTVRSSGRPGAKWSRGGKKSHSRVLTWLASRWRNHRLKRAKKPHSKIQLSPQNGRLDGPATRPKRTPLAVENSVGKLAAPEMRRLMSAREREHGELP
Ga0134042_113868913300012373Grasslands SoilVASGERAARSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPL
Ga0134029_117202613300012377Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREWRTPIPH
Ga0134058_101220613300012379Grasslands SoilVASGERAARSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATSPETPLAVENSVGKLAAPARVRA*
Ga0134030_106295413300012387Grasslands SoilVALGQRIAKSGGRPSAKWSRRGDESHSRVLTWFASRWRNHQPKRAERPHSNSSRRNPLDGPAMRPVTPLAVENGVGKLAA
Ga0134030_124702513300012387Grasslands SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPARV
Ga0134031_107323013300012388Grasslands SoilVASGERAAKSRGRPEANRSRRGDEVINVSLTWFASRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSVGKLAAPARVRA*
Ga0134054_101377013300012390Grasslands SoilVASGERAAKSGGRPESQWLRRERKNHRRVLTWFASRWRNHQPKRAEKPHSKSVQRKLADGPATRPKTPLAVENSVGKPAASEKSAPNAGSGKRAW
Ga0134056_111433113300012397Grasslands SoilVASGERAARSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSV
Ga0134049_126115113300012403Grasslands SoilVALGQRIAKSGGRPSAKWSRRGDESHSRVLTWFASRWRNHQPKRAERPHSNSSRRNPLDGPAMRPVTPLAVENGVGKLAAN
Ga0134053_134262413300012406Grasslands SoilVASGERAAKSGGRPESQWLRRERKNHRRVLTWFASRWRNHQPKRAEKPHSKSVQRKLTDGPATRPKTPLAVENGVGKLAAPEMRRPIASTGKREWR
Ga0150984_11200224723300012469Avena Fatua RhizosphereVALGQRIATSDGRPSAKWSRRGDESHSRVLTWFASRWRNHQPKRAERPHSKSSRRNPLDGPAMRPVTPLAVENGVGKLAANFVGAKCQRGKESLAHSHQIGRA
Ga0126369_1211759713300012971Tropical Forest SoilVASGERAAKSSGGPGAKWLRRGKKSRRRVLTWFADRWRNHRSKRAEKPHSIIQCARKNGPLDGPATRPKTPLAVENGVGKL
Ga0154014_13162813300013052Corn, Switchgrass And Miscanthus RhizosphereVVMGQRTAKSGGRPVAKWSRRGKNGHRRVLTWFASRWRNHQLKRAEKPHSITQGSGNGELSGPATRPKTPLAVENSVGKLAAPEMRRQMSARER
Ga0132258_1147239123300015371Arabidopsis RhizosphereMGQRTAKSGGRPVAKWSRRGKNGHRRVLTWFASRWRNHQFKQAEKPHSKFSSRKTLDGPATRPMTPLAVENSVGKPAADRAPNVGTGKRAWRTPIPRFVPV*
Ga0187789_124070613300019199PeatlandVAPGQRAANSGGRPGAKWSRRGPSSHRRVSTWFASRCRNHQPKRAEKPHSKSKRRKALDGPATRPMTPLAVENSVGKLAAPL
Ga0187789_131698913300019199PeatlandVASGERAAKSRGRPEANRSRRGDEVINVSLTWFASRWRNHQPKRAEKPHSIIQCCEVLDGPATRPETPLAVENSVG
Ga0180119_126875913300019228Groundwater SedimentVAPGQRAAKSRGRPGAKWSRRGNKVTNVSLTWFASRWRNHQPKRAEKPHSTIQRRKTLDGPATRPTTPLAVENSVGKLTAPARAAPNV
Ga0184645_110508713300019233Groundwater SedimentVASGERAAKSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREALDGPATRPETPLAVENSVGKLAAPARVRA
Ga0180112_103101113300019238Groundwater SedimentMGQRIVKSDGRPVANRSRSGTTNRSRVLTWFAGRWRNHQSKQAEKPHSTVQRCETLDGPATRPITPLAVENSVGKPAA
Ga0187791_102124213300019245PeatlandVAPGKRMAKSRGRPGAKRWRRGRIVADVSSPGPRAGGCNHQLKRAEKPHSIIQRRKALDGPATRPQTPLAVENSVGKLAAN
Ga0180117_137792213300019248Groundwater SedimentVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRCRKHQPKRAEKPHSTIQRRKTLDGPATRPTTPLAVENSVGKLAASARTAPNVSSGKR
Ga0187790_109643913300019250PeatlandVAPGERAAKSGGRPGSKWSRRGQAHKRVLTWFVSRWRNHQPKRAEKPHSIIQRRKTLDGPATRPKTPLAVENGVGKLAA
Ga0187796_149814113300019264PeatlandVAPGQRAAKSRGRPGAKWSRRGQRCRSRVLAWFANRWRNHQSKRAEKPHSKFSRRKTLDGPATRPMTPLAVENSVGKLAAPH
Ga0184644_138263523300019269Groundwater SedimentVAPGQRAAKSRGRPGAKWSRRGNKIANVSLTWFAGRWRNHQPKRAEKPHSTIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREWRTPIP
Ga0181512_107457913300019270PeatlandVALGERIASSRWLSQSQWSRREREIRRRVLTWFAGRCCNHQPKRAEKPHSKSAHRKVSDGPATRPITPLAVENGVGKPAAPEKGAPNAGSGK
Ga0187794_131895013300019273PeatlandVAPGQRAAKSSGRPGAKWSRRGDCSRKRVLTWFASRWRNHQPKRAEKPHSKSSNRKVLDGPATRPKTPLAVENGVGKLAA
Ga0180109_106192713300020067Groundwater SedimentVASGERAAKNRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSVGKLAA
Ga0206356_1081932913300020070Corn, Switchgrass And Miscanthus RhizosphereVAQGERTVKSRGGPCAKWSRRDDENHRRVLAWFAGRWRKHQSKRAEKPHSIIQHRELLDGPATRPITPLAVENSVGKPAAP
Ga0206351_1095178113300020077Corn, Switchgrass And Miscanthus RhizosphereVARGKRAAKSRGRPCAKWSRRDDENHRRVLAWLAGRWRNHQSKRAEKPHSIIQSREALDGPATRPITPLAVENSVGKLAA
Ga0206352_1028141213300020078Corn, Switchgrass And Miscanthus RhizosphereVARGERMAKSRGGPCAKWPRRDDENHRRVLVWFAGRCRNHQSKRAEKPHSIIQGRKAMDGPATRPITPLAVENSVGKPAAPARV
Ga0154015_159021213300020610Corn, Switchgrass And Miscanthus RhizosphereVARGKRAAKSRGRPCAKWSRRDDENHRRVLAWLAGRWRNHQSKRAEKPHSIIQSREALDGPATRPITPLAVENGVGKL
Ga0210356_17384513300021269EstuarineVASGERAAKSRGRPEANRSRRGDEVINVSLTWFAGRWRNHQPKRAEKPHSTIQCREALGGPATRPETPLAVENSVGKLAA
Ga0179583_102373033300021286Vadose Zone SoilVARGERTVKSRGGPCAKWSRRDDENHRRVLAWFAGRWRNHQSKRAEKPHSIIQHRELLDGPATRPITPLAVENSVGKPAAP
Ga0210302_108221513300021299EstuarineVAPGQRTAKSRGRPGAKWSRRGNKVINVSLSWFASRWRNHQPKRAEKPHSIIQRRKALDGPATRPTTPLAVENSVGKPAAPEKGAPNAGAGKREWRTP
Ga0213849_110854413300021857WatershedsVASGERAARSRGRPEANWSRRGDEVINVSLTWFASRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSVGKLAAP
Ga0213853_1090191313300021861WatershedsVASGERAAKSRGRPEANRSRRGDEVINVSLTWFASRWRNHQPKRAEKPHSTIQCREALDGPATRPMTPLAVENSVGKLAAP
Ga0213856_105370213300021947WatershedsVASGERAAKSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCRKVLDGPATRPETPLAVENSVGKLAAPARVRA
Ga0213857_101438513300022171WatershedsVAPGQRTAKSRGRPGAKWSRRGNKVINVSLTWFASRWRNHQPKRAEKPHSTIQRRKALDGPATRPTTPLAVENSVGKLTAPARAAPNVSAGKREWRTPIP
Ga0222625_100968313300022195Groundwater SedimentVSEKQPEREEARPVARGERAAKSRGRPCAKWSRRGVENHKRVLTWFAGRWRNHQSKRAEKPHSIIQRRETLDGPATRPNNS
Ga0242672_103008213300022720SoilVASGERAAKSGGGPGAKWSRRGNNSRKRVLTWFANRWRNHQSKRAEKPHSITQRFRKNGMLGGPATRPMTPLAVENSVGKLAAPETGRQMPAREREPGELP
Ga0228708_105667113300023703FreshwaterVASGERTARSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCCEVLDGPATRPETPLAVENSVGKPAAPLRWERQMSARERECGELPSP
Ga0255275_111473413300024574FreshwaterVARGKRAAKSGGCPCAKWSRRDRKHSRVLTWFVSRWRNHQPKRAEKPHSNSSGRKALDGPAARPETPLAVENSVGKP
Ga0207691_1065969913300025940Miscanthus RhizosphereVVMGQRTAKSGGRPVAKWSRRGKNGHRRVLTWFASRWRNHQPKQAEKPHSKFNGRKTLDGPATRPQTPLAVENSVGKLAVE
Ga0308203_102497513300030829SoilVALSQRIGKTDCGLSANWSRRGNNYSRVLAWFAGRWRNHRLKRAEKPYSIIQCARKNGPLDGPATRPKTPLAVENGVGKLAAPLRWVRLMSAWEREHG
Ga0308203_102723313300030829SoilVAPGQRAAKSRGRPGAKWSRRGNKIANVSLTWFAGRWRNHQPKRAEKPHSTIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREW
Ga0308202_104403313300030902SoilVAPGERAVTSSGRPSANWSRRGQESRSRVLTWFASRWRNHQPKRAEKPHSKSSGRKALDGPATRPPTPLAVENSVGKLAATVMRRLMPAWEREYG
Ga0308198_102705813300030904SoilVAPGQRAAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAEKPHSTIQRRKMLDGPATRPITPLAVENSVGKLTAPARAAPNVSMGKRE
Ga0308200_111713123300030905SoilVAPGERAVTSSGRPSANWSRRGQESRSRVLTWFASRWRNHQPKRAEKPHSKSSGRKALDGPATRPPTPLAVENSVGKLAATVMRRLMPAWEREYGELP
Ga0075394_1200550013300030969SoilVALGKRIAKSDGRPSAKWSRRGDESHSRVLTWFASRWRNHQPKRAERPHSKSSRRNPLDGPAMRPVTPLAVENGVGKLAAKAR
Ga0308155_100866313300030987SoilVAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAEKPHSTIQRRKTLDGPATRPTTPLAVENSVGKLAAPQKGAPNSQHGKESMANSHPPICPCL
Ga0308196_101667013300030989SoilVAPGERAVTSSGRPSANWSRRGQESRSRVLTWFASRWRNHQPKRAEKPHSKSSGRKVLDGPATRPQTPLAVENSVGKLAAAEMRRLMPAWEREYGELPSPIWSLLG
Ga0073996_1222577513300030998SoilVALGQRIAKSDGRPSAKWSRRGDESHSRVLTWFASRWRNHQPKRAERPHSKSSRRNPLDGPAMRPVTPLAVENGVGKLA
Ga0308189_1020126313300031058SoilVASGERAAKNRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREALDGPATRPETPLAVENSVGKLAAPEA
Ga0308192_102474213300031082SoilVAPGERAVTSSGRPSANWSRRGQESRSRVLTWFASRWRNHQPKRAEKPHSKSSGRKALDGPATRPPTPLAVENSVGKLAATVMRRLMPAWEREYGE
Ga0308199_105277613300031094SoilVAPGQRAAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAEKPHSTIQRRKMLDGPATRPITPLAVENSVGKLTAPARAAPNVSMGKREW
Ga0308182_100755813300031125SoilVAPGQRTVKSGGRPGAKWSRRGKNRKRVLAWFVSRWRNHQPKRAEKPHSKFSVRKALDGPAMRPQTPLAVENGVGKLAAKARPMPAWERESGE
Ga0308182_102432913300031125SoilVAPGQRAANSRGRPGAKWSRRGNKIANVSLTWFAGRWRNHQPKRAEKPHSTIQRRKTLDGPATRPITPLAVENSVGKLTAPARA
Ga0170824_10592098413300031231Forest SoilVALGQRIAKSDGRPSAKWSRRGDESHSRVLTWFASRWRNHQPKRAERPHSKSSRRNPLDGPAMRPVTPLAVENGVGKLAANFVGAK
Ga0308194_1010807623300031421SoilVALGQRIAKSGGRPSAKWSRRGDESHSRVLTWFASRWRNHQPKRAERPHSNSSRRNPLDGPAMRPMTPLAVENGVGKLAANSLAPNVSAGKRAWRTPI
Ga0170820_1325421313300031446Forest SoilVALGKRIAKSDGRPSAKWSRRGDESHSRVLTWFASRWRNHQPKRAERPHSKSSRRNPLDGPAMRPVTPLAVENGVGKLAA
Ga0315271_1128101213300032256SedimentVAPGQRTAKSRGRPGAKWSRRGNKVINVSLTWFASRWRNHQPKRAEKPHSIIQRRKALDGPATRPTTPLAVENSVGKLTAPARAAPNVSAGKREWRTPIP
Ga0326787_029707_516_7553300034363SoilMARGERTAKSRGRPCAKWPRRDDENHRRVLVWFAGRCRNHQSKRAEKPHSTIQCREAMDGPATRPITPLAVENSVGKPAA
Ga0370540_03330_519_8123300034448SoilMAPGERAVTSSGRPSANWSRRGQESRSRVLTWFASRWRNHQPKRAEKPHSKSSGRKALDGPATRPPTPLAVENSVGKLAATVMRRLMPAWEREYGELP
Ga0370545_059268_463_7623300034643SoilMAPGQRAAKSRGRPGAKWSRRGNKVTNVSLTWFASRWRNHQPKRAEKPHSTIQRRETLDGPATRPTTPLAVENSVGKLAASARTAPNVSSGKREWRTPIP
Ga0370548_040149_2_2863300034644SoilMAPGERAVTSSGRPSANWSRRGQESRSRVLTWFASRWRNHQPKRAEKPHSKSSGRKALDGPATRPPTPLAVENSVGKLAATVMRRLMPAWEREYG
Ga0314782_047024_588_8453300034661SoilMARGERTVKSRGGPCAKWSRRDDENHRRVLAWFAGRWRNHQSKRAEKPHSIIQQRELLDGPATRPITPLAVENSVGKPAAPARVRA
Ga0314787_066541_332_5923300034665SoilMASGERAAKSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSVGKLAAPARVRA
Ga0314788_055908_2_2773300034666SoilMGQRTAKSGGRPMAKWSRRGDKSHRRVLTWLASRWRNHRFKRAEKPHSIDSVFWKNRETGRPCYEAEQTPLAVENSVGKLAAPEMRRLMSAR
Ga0314788_084111_392_6913300034666SoilMAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAEKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREWRTPIP
Ga0314793_041838_516_8093300034668SoilMAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAEKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPVRAAPNVSAGKREWRTP
Ga0314795_113926_3_2273300034670SoilMASGERTARSRGRPEANRSRRGDEVINVSLTWFASRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSV
Ga0314797_047656_3_2963300034672SoilMASGERAAKSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSRIQRRKTLDGPATRPKTPLAVENSVGKLAAPPCGAPNASMGKRAWRTP
Ga0314803_024356_637_9213300034678SoilMAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAEKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPVRAAPNVSAGKREW
Ga0314803_046631_2_2383300034678SoilMARGERTVKSRGGPCAKWSRRDDENHRRVLAWFAGRWRNHQSKRAEKPHSIIQQRELLDGPATRPITPLAVENSVGKPA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.