Metagenome / Metatranscriptome Family F079670

Basic Information
Family ID	F079670
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	48 residues
Representative Sequence	KKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKI
Number of Associated Samples	98
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.48 %
% of genes near scaffold ends (potentially truncated)	76.52 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (94.783 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.391 % of family members)
Environment Ontology (ENVO)	Unclassified (23.478 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (34.783 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.55% β-sheet: 0.00% Coil/Unstructured: 22.45%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF03144	GTP_EFTU_D2	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.78 %
All Organisms	root	All Organisms	5.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.78 %
cellular organisms	root	All Organisms → cellular organisms	5.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.78 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.78 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.78 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.48 %
Oligoflexia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.78 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.48 %
Oligoflexales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Oligoflexales	0.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.78 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.48 %
Oligoflexaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Oligoflexales → Oligoflexaceae	0.87 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.78 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.48 %
Candidatus Zinderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Candidatus Zinderia	0.87 %
Oligoflexus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Oligoflexales → Oligoflexaceae → Oligoflexus	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.78 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.48 %
Candidatus Zinderia insecticola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Candidatus Zinderia → Candidatus Zinderia insecticola	0.87 %
Oligoflexus tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Oligoflexales → Oligoflexaceae → Oligoflexus → Oligoflexus tunisiensis	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100511217	Not Available	1078	Open in IMG/M
3300002647\|Ga0005469J37257_100803	Not Available	572	Open in IMG/M
3300002648\|Ga0005468J37256_100444	Not Available	749	Open in IMG/M
3300002650\|Ga0005470J37258_102454	Not Available	569	Open in IMG/M
3300002662\|Ga0005456J37224_100613	Not Available	887	Open in IMG/M
3300002668\|Ga0005482J37270_100267	Not Available	718	Open in IMG/M
3300002673\|Ga0005480J37268_103473	Not Available	502	Open in IMG/M
3300002866\|Ga0006772J43183_100004	Not Available	617	Open in IMG/M
3300002866\|Ga0006772J43183_100346	Not Available	502	Open in IMG/M
3300003160\|Ga0006779J45831_100010	Not Available	877	Open in IMG/M
3300003162\|Ga0006778J45830_1000034	Not Available	601	Open in IMG/M
3300003162\|Ga0006778J45830_1000083	Not Available	674	Open in IMG/M
3300003162\|Ga0006778J45830_1001916	Not Available	589	Open in IMG/M
3300003163\|Ga0006759J45824_1003178	Not Available	541	Open in IMG/M
3300003288\|Ga0007428J48920_100035	Not Available	599	Open in IMG/M
3300003305\|Ga0006770J48903_1000014	Not Available	619	Open in IMG/M
3300003305\|Ga0006770J48903_1003493	Not Available	540	Open in IMG/M
3300003305\|Ga0006770J48903_1003624	Not Available	857	Open in IMG/M
3300003308\|Ga0006777J48905_1000680	Not Available	913	Open in IMG/M
3300003308\|Ga0006777J48905_1004778	Not Available	811	Open in IMG/M
3300003557\|Ga0007432J51704_105634	Not Available	560	Open in IMG/M
3300003563\|Ga0007430J51106_101174	Not Available	847	Open in IMG/M
3300003570\|Ga0007418J51697_1000014	Not Available	743	Open in IMG/M
3300003575\|Ga0007409J51694_1001946	Not Available	876	Open in IMG/M
3300003576\|Ga0007413J51701_1005276	Not Available	541	Open in IMG/M
3300003577\|Ga0007416J51690_1000042	Not Available	866	Open in IMG/M
3300003579\|Ga0007429J51699_1012179	Not Available	833	Open in IMG/M
3300003692\|Ga0007426_1000028	Not Available	604	Open in IMG/M
3300003706\|Ga0008095_103898	Not Available	677	Open in IMG/M
3300003717\|Ga0006766_100390	All Organisms → cellular organisms → Eukaryota	1288	Open in IMG/M
3300003717\|Ga0006766_101802	Not Available	545	Open in IMG/M
3300004104\|Ga0058891_1031413	Not Available	779	Open in IMG/M
3300004116\|Ga0058885_1012126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Candidatus Zinderia → Candidatus Zinderia insecticola	1462	Open in IMG/M
3300004139\|Ga0058897_11075668	Not Available	521	Open in IMG/M
3300004486\|Ga0068951_107801	Not Available	681	Open in IMG/M
3300004785\|Ga0058858_1032457	Not Available	980	Open in IMG/M
3300004799\|Ga0058863_10094676	Not Available	532	Open in IMG/M
3300004799\|Ga0058863_10159394	Not Available	980	Open in IMG/M
3300004801\|Ga0058860_10125836	Not Available	684	Open in IMG/M
3300004803\|Ga0058862_10168470	Not Available	539	Open in IMG/M
3300004972\|Ga0072325_1312134	Not Available	731	Open in IMG/M
3300006933\|Ga0081247_1201550	Not Available	634	Open in IMG/M
3300010061\|Ga0127462_122563	Not Available	941	Open in IMG/M
3300010061\|Ga0127462_129729	Not Available	504	Open in IMG/M
3300010062\|Ga0127426_137583	Not Available	539	Open in IMG/M
3300010066\|Ga0127427_110492	Not Available	529	Open in IMG/M
3300010068\|Ga0127442_116493	Not Available	502	Open in IMG/M
3300010074\|Ga0127439_143356	Not Available	548	Open in IMG/M
3300010101\|Ga0127481_1112798	Not Available	598	Open in IMG/M
3300010146\|Ga0126320_1013507	Not Available	1033	Open in IMG/M
3300012386\|Ga0134046_1057567	Not Available	993	Open in IMG/M
3300012406\|Ga0134053_1232848	Not Available	681	Open in IMG/M
3300012469\|Ga0150984_103082134	Not Available	951	Open in IMG/M
3300018433\|Ga0066667_10556233	Not Available	953	Open in IMG/M
3300019171\|Ga0184572_116135	Not Available	541	Open in IMG/M
3300019233\|Ga0184645_1141671	Not Available	503	Open in IMG/M
3300019233\|Ga0184645_1143011	Not Available	941	Open in IMG/M
3300019245\|Ga0187791_1358849	Not Available	708	Open in IMG/M
3300019251\|Ga0187795_1028448	Not Available	502	Open in IMG/M
3300019254\|Ga0184641_1091370	Not Available	610	Open in IMG/M
3300019255\|Ga0184643_1189329	All Organisms → cellular organisms → Eukaryota	1161	Open in IMG/M
3300019259\|Ga0184646_1529150	All Organisms → cellular organisms → Eukaryota	990	Open in IMG/M
3300020069\|Ga0197907_10039107	Not Available	749	Open in IMG/M
3300020070\|Ga0206356_10676365	Not Available	576	Open in IMG/M
3300020078\|Ga0206352_10006292	Not Available	674	Open in IMG/M
3300020078\|Ga0206352_10386903	Not Available	521	Open in IMG/M
3300021951\|Ga0222624_1265177	Not Available	538	Open in IMG/M
3300021951\|Ga0222624_1295011	Not Available	765	Open in IMG/M
3300022195\|Ga0222625_1245286	Not Available	945	Open in IMG/M
3300022467\|Ga0224712_10372357	Not Available	678	Open in IMG/M
3300022503\|Ga0242650_1002055	All Organisms → cellular organisms → Eukaryota	1156	Open in IMG/M
3300022530\|Ga0242658_1220896	Not Available	524	Open in IMG/M
3300023658\|Ga0184591_104476	Not Available	529	Open in IMG/M
3300030546\|Ga0247646_1117365	Not Available	680	Open in IMG/M
3300030547\|Ga0247656_1044198	Not Available	776	Open in IMG/M
3300030547\|Ga0247656_1202386	Not Available	535	Open in IMG/M
3300030551\|Ga0247638_1135108	Not Available	587	Open in IMG/M
3300030552\|Ga0247654_1077365	Not Available	666	Open in IMG/M
3300030563\|Ga0247653_1018610	Not Available	718	Open in IMG/M
3300030563\|Ga0247653_1101431	Not Available	515	Open in IMG/M
3300030570\|Ga0247647_1182603	Not Available	588	Open in IMG/M
3300030571\|Ga0247652_1158638	Not Available	558	Open in IMG/M
3300030572\|Ga0210258_10144966	Not Available	1320	Open in IMG/M
3300030590\|Ga0247643_1147335	Not Available	557	Open in IMG/M
3300030602\|Ga0210254_10232689	Not Available	1061	Open in IMG/M
3300030604\|Ga0247637_1040251	Not Available	812	Open in IMG/M
3300030621\|Ga0247655_10139704	Not Available	663	Open in IMG/M
3300030633\|Ga0247623_10010992	Not Available	1159	Open in IMG/M
3300030748\|Ga0074043_11477275	Not Available	513	Open in IMG/M
3300030829\|Ga0308203_1018427	Not Available	885	Open in IMG/M
3300030831\|Ga0308152_112250	Not Available	550	Open in IMG/M
3300030845\|Ga0075397_11193771	Not Available	502	Open in IMG/M
3300030885\|Ga0265743_107348	Not Available	715	Open in IMG/M
3300030902\|Ga0308202_1069662	Not Available	680	Open in IMG/M
3300030905\|Ga0308200_1079353	Not Available	667	Open in IMG/M
3300030945\|Ga0075373_10055965	Not Available	545	Open in IMG/M
3300030987\|Ga0308155_1015837	Not Available	658	Open in IMG/M
3300031011\|Ga0265774_102527	Not Available	696	Open in IMG/M
3300031092\|Ga0308204_10299829	Not Available	538	Open in IMG/M
3300031092\|Ga0308204_10305600	Not Available	534	Open in IMG/M
3300031100\|Ga0308180_1037936	Not Available	521	Open in IMG/M
3300031231\|Ga0170824_106922898	Not Available	540	Open in IMG/M
3300031421\|Ga0308194_10336504	Not Available	533	Open in IMG/M
3300031828\|Ga0316043_132899	Not Available	507	Open in IMG/M
3300031866\|Ga0316049_120777	Not Available	532	Open in IMG/M
3300034447\|Ga0370544_21167	Not Available	530	Open in IMG/M
3300034479\|Ga0314785_003234	Not Available	986	Open in IMG/M
3300034479\|Ga0314785_012259	Not Available	634	Open in IMG/M
3300034479\|Ga0314785_016219	Not Available	580	Open in IMG/M
3300034480\|Ga0314789_014138	Not Available	681	Open in IMG/M
3300034644\|Ga0370548_151036	Not Available	501	Open in IMG/M
3300034659\|Ga0314780_176049	Not Available	544	Open in IMG/M
3300034661\|Ga0314782_116387	Not Available	622	Open in IMG/M
3300034664\|Ga0314786_064947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Oligoflexia → Oligoflexales → Oligoflexaceae → Oligoflexus → Oligoflexus tunisiensis	720	Open in IMG/M
3300034671\|Ga0314796_044715	Not Available	825	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.78%
Host-Associated	Host-Associated	25.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.96%
Plants	Host-Associated → Plants	20.87%
Aquatic	Environmental → Aquatic	7.83%
Human	Host-Associated → Human	4.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.04%
Freshwater	Environmental → Aquatic → Freshwater	7.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.83%
Digestive System	Host-Associated → Human → Digestive System	4.35%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.04%
Loam	Environmental → Terrestrial → Soil → Loam	8.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.96%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	4.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.96%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	4.35%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	13.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	7.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	4.35%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.74%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.74%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002647	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF118 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002648	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF117 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002650	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF119 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002662	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF105 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002668	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF131 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002673	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF129 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002866	Avena fatua rhizosphere microbial communities - H3_Rhizo_Litter_15 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003160	Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_22 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003162	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003163	Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003288	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_44 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003305	Avena fatua rhizosphere microbial communities - H3_Rhizo_Litter_13 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003308	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003557	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Bulk_48 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003563	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Bulk_46 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003570	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_34 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003575	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003576	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Bulk_29 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003577	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003692	Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_42 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003706	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A100I (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003717	Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_9 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004116	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF206 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004486	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 39 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004972	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006933	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A100I (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010061	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010062	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010066	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010068	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010074	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010101	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019171	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019245	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019251	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023658	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030546	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030547	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db9 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030551	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030552	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db7 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030563	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb6 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030570	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030571	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb5 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030572	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR103SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030590	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb8 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030602	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR018SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030604	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030621	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db8 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030633	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030748	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter C3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030831	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030845	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030885	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031011	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031100	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031828	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300034447	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034479	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034480	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1005112171	3300002245	Forest Soil	WKPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFKKKYKFVFFNI*
Ga0005469J37257_1008031	3300002647	Forest Soil	LKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFKKKYKFVFFNI*
Ga0005468J37256_1004441	3300002648	Forest Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLKIKNFFFIKKKSLLIII*
Ga0005470J37258_1024541	3300002650	Forest Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFKKKYKFVFFNI*
Ga0005456J37224_1006131	3300002662	Forest Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFF*
Ga0005482J37270_1002671	3300002668	Forest Soil	VKRTLKKGLKVLEMVKRERNKIITIVNSLKLRTNFNKFVLINI*
Ga0005480J37268_1034731	3300002673	Forest Soil	LKKGLKVLEMVKRERNKIITIVNSLKLRTNFNKFVLINI*
Ga0006772J43183_1000041	3300002866	Avena Fatua Rhizosphere	VKRTLKKGLKVLEMVKRERNKIIIIDNSLILRTILYFLKKKKYNLS*
Ga0006772J43183_1003461	3300002866	Avena Fatua Rhizosphere	VKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFFKKKI*
Ga0006779J45831_1000101	3300003160	Avena Fatua Rhizosphere	LKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFFFKKKYNLS*
Ga0006778J45830_10000341	3300003162	Avena Fatua Rhizosphere	VKRTLKKGLKVLEMVKRERNKIIIIDNSLILRTILYFLIKKKYNLS*
Ga0006778J45830_10000831	3300003162	Avena Fatua Rhizosphere	KKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLILRTILYFLKKKI*
Ga0006778J45830_10019161	3300003162	Avena Fatua Rhizosphere	VKRTLKKGLKVLEMVKRERNKIITIDNSLKIKNFFFIKKKVS*
Ga0006759J45824_10031781	3300003163	Avena Fatua Rhizosphere	PIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFFFLKKYNLS*
Ga0007428J48920_1000351	3300003288	Avena Fatua Rhizosphere	LKKGLKVLEMVKRERNKIIIIDNSLKLSTTLYFSFKKKYNLS*
Ga0006770J48903_10000141	3300003305	Avena Fatua Rhizosphere	LKKGLKVLEMVKRERNKIIIIDNSLILRTILYFLKKKKYNLS*
Ga0006770J48903_10034931	3300003305	Avena Fatua Rhizosphere	KPIEKKYSNGKVKRTLKKGLKVLERLKGKGIKIITIDNSLKLRTILYFFFKKKNIICLNNI*
Ga0006770J48903_10036241	3300003305	Avena Fatua Rhizosphere	KPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLIQFLYIFFKKIYKFVLIIFEF*
Ga0006777J48905_10006801	3300003308	Avena Fatua Rhizosphere	WKPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLKIKNFFFIKKKVS*
Ga0006777J48905_10047781	3300003308	Avena Fatua Rhizosphere	NGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLIQFLYIFFKKIYKFVLIIFEF*
Ga0007432J51704_1056341	3300003557	Avena Fatua Rhizosphere	LKKGLKVLEMVKRERNKIIIIDNSLKLIQFLYIFLKKYINLS*
Ga0007430J51106_1011741	3300003563	Avena Fatua Rhizosphere	KTIELLFGKIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTTLYFS*
Ga0007418J51697_10000141	3300003570	Avena Fatua Rhizosphere	LKKGLKVLEMVKRERNKIIIIDNSLILRTILYFLIKKKYNLS*
Ga0007409J51694_10019461	3300003575	Avena Fatua Rhizosphere	IELLFGKIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLIQFLYIFFKKIYKFVLIIFEF*
Ga0007413J51701_10052761	3300003576	Avena Fatua Rhizosphere	PIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLRLSTNLNF*
Ga0007416J51690_10000421	3300003577	Avena Fatua Rhizosphere	KRTLKKGLKVLEMVKRERNKIIIIDNSLILRTILYFLKKKI*
Ga0007429J51699_10121791	3300003579	Avena Fatua Rhizosphere	KYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLIQFLYIFLKKYINLS*
Ga0007426_10000281	3300003692	Avena Fatua Rhizosphere	LKKGLKVLEMVKRERNKIIIIDNSLKLSTTLYFSLKKKYNLS*
Ga0008095_1038981	3300003706	Tropical Rainforest Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLKLFSILYFFFKKKYKFDLI*
Ga0006766_1003901	3300003717	Avena Fatua Rhizosphere	VWKPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLIQFLYIFFKKIYKFVLIIFEF*
Ga0006766_1018021	3300003717	Avena Fatua Rhizosphere	VWKPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTTLYFS*
Ga0058891_10314131	3300004104	Forest Soil	PIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLKIKNFY*
Ga0058885_10121261	3300004116	Forest Soil	IIVWKPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFKKKYKFVFFNI*
Ga0058897_110756681	3300004139	Forest Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFKKKKKFFFFNF
Ga0068951_1078011	3300004486	Peatlands Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFI*
Ga0058858_10324571	3300004785	Host-Associated	KTIEIVWKPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIVIIDNSLKLRTTLYFF*
Ga0058863_100946761	3300004799	Host-Associated	KKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTILYFSKTKI*
Ga0058863_101593941	3300004799	Host-Associated	KTIELLFGKIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIVIIDNSLKLRTTLYFF*
Ga0058860_101258361	3300004801	Host-Associated	IVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTILYFSKTKI*
Ga0058862_101684701	3300004803	Host-Associated	IVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKI*
Ga0072325_13121341	3300004972	Peatlands Soil	VKRTLKKGLKVLEMVKRERNKIIIIDNSLILRTILYFLKKKI*
Ga0081247_12015501	3300006933	Tropical Rainforest Soil	LKKGLKVLEMVKRERNKIITIDNSLKLFSILYFFFKKKYKFDLI*
Ga0127462_1225631	3300010061	Grasslands Soil	KKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRQLYIFFSFNKGKKYNLSL*
Ga0127462_1297291	3300010061	Grasslands Soil	KKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKI*
Ga0127426_1375831	3300010062	Grasslands Soil	KPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKI*
Ga0127427_1104921	3300010066	Grasslands Soil	NGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLILRTILYFFEKKNIICLDNI*
Ga0127442_1164931	3300010068	Grasslands Soil	IVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTTLYFS*
Ga0127439_1433561	3300010074	Grasslands Soil	KPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLILRTILY*
Ga0127481_11127981	3300010101	Grasslands Soil	KRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKI*
Ga0126320_10135071	3300010146	Soil	VKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLIQIFIYFFKKLYIN*
Ga0134046_10575672	3300012386	Grasslands Soil	KPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLILRTILYFLKKKI*
Ga0134053_12328481	3300012406	Grasslands Soil	KPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTTLYFS*
Ga0150984_1030821341	3300012469	Avena Fatua Rhizosphere	VKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLNNNIFFTKKKRLFLMIFEL*
Ga0066667_105562331	3300018433	Grasslands Soil	VKRTLKKGLKVLEMVKRERNKIIIIDNSLILRTIL
Ga0184572_1161351	3300019171	Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFLKKNIKLFLILMNY
Ga0184645_11416711	3300019233	Groundwater Sediment	PIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRQFYIFFF
Ga0184645_11430111	3300019233	Groundwater Sediment	PIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKI
Ga0187791_13588491	3300019245	Peatland	VEKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLILRTKLYNFF
Ga0187795_10284481	3300019251	Peatland	VKKYSNGKVKRTLKKGFKVLEMVKRERNKIITIDNSLILRTKLYNFFLKKIIIFVLII
Ga0184641_10913701	3300019254	Groundwater Sediment	GLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKYNLS
Ga0184643_11893291	3300019255	Groundwater Sediment	PIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLNNKIFFTKKKRLFLMIFEL
Ga0184646_15291501	3300019259	Groundwater Sediment	IVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLNNKIFFTKKKRLFLMIFEL
Ga0197907_100391071	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	YSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKI
Ga0206356_106763651	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	IVKKYSNGKVKRTLKKGLKVLEMVKRERNKIVIIDNSLKLRTTLYFF
Ga0206352_100062921	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	SNGKVKRTLKKGLKVLEMVKRERNKIIKIDNSLKLIQIYIFF
Ga0206352_103869031	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	NGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKI
Ga0222624_12651771	3300021951	Groundwater Sediment	IVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKI
Ga0222624_12950111	3300021951	Groundwater Sediment	WKPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLRLIQFYIF
Ga0222625_12452861	3300022195	Groundwater Sediment	KKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRQLYIFFSFNKGKKYNLSL
Ga0224712_103723571	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	KKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTILYFS
Ga0242650_10020551	3300022503	Soil	KPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFKKKYKFVFFN
Ga0242658_12208961	3300022530	Soil	KPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLKIKNFY
Ga0184591_1044761	3300023658	Soil	VLEMVKRERNKIITIDNSLKLRTILYFFFKKKYNLSFLYLNFN
Ga0247646_11173651	3300030546	Soil	LKKGLKVLEMVKRERNKIVKIDNSLKLRTILYFFLYKKKYNLSK
Ga0247656_10441981	3300030547	Soil	VKRTLKKGLKVLEMVKRERNKIVKIDNSLKLRTILYFF
Ga0247656_12023861	3300030547	Soil	TLKKGLKVLEMVKRERNKIVKIDNSLKLRTILYFFFI
Ga0247638_11351081	3300030551	Soil	SIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIVIIDNSLKLRTIL
Ga0247654_10773651	3300030552	Soil	VKRTLKKGLKVLEMVKRERNKIIIIDNSLKLIQYYVFFVKEKNIVCLDNI
Ga0247653_10186101	3300030563	Soil	VKRTLKKGLKVLEMVKRERNKIIIIDNSLKLNNNFFFKKKVVFNDI
Ga0247653_11014311	3300030563	Soil	KGLKVLEMVKRERNKIVKIDNSLKLRTILYFFLYKKKI
Ga0247647_11826032	3300030570	Soil	VKRTLKKGLKVLEMVKRERNKIIIIDNSLKLNNKIFFTKKKKIVFNDI
Ga0247652_11586381	3300030571	Soil	RTLKKGLKVLEMVKRERNKIVKIDNSLKLRTILYFFLYKKNIICLNNI
Ga0210258_101449661	3300030572	Soil	KVLEMVKRERNKIITIDNSLKLRTILYFFFKKKYKFVFFNI
Ga0247643_11473351	3300030590	Soil	MVKRERNKIVKIDNSLKLRTILYFFLYKKKYNLSK
Ga0210254_102326891	3300030602	Soil	KKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFKKKYKFVFFNI
Ga0247637_10402511	3300030604	Soil	KLLIIVWKPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLNNNFFLKKSCF
Ga0247655_101397041	3300030621	Soil	VKRTLKKGLKVLEMVKRERNKIVKIDNSLKLRTILYFFLYKKKY
Ga0247623_100109922	3300030633	Soil	LKKGLKVLEMVKRERNKIVKIDNSLKLRTILYFFLYKKKY
Ga0074043_114772751	3300030748	Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFKKKYN
Ga0308203_10184271	3300030829	Soil	IVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRSILYFLKKKI
Ga0308152_1122501	3300030831	Soil	VWKPIEKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLRLIQFYIF
Ga0075397_111937711	3300030845	Soil	VKRTLKKGLKGLEMVKRERKKIITIDNSLKLKTILYFFFKKK
Ga0265743_1073481	3300030885	Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFF
Ga0308202_10696621	3300030902	Soil	IVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTILYFSKTKI
Ga0308200_10793531	3300030905	Soil	KKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTTLYFS
Ga0075373_100559651	3300030945	Soil	KVKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFI
Ga0308155_10158371	3300030987	Soil	VKRTLKKGLKVLEMVKRERNKIIIIDNSLKLNNKIFFTKKKRLFLMIFEL
Ga0265774_1025271	3300031011	Soil	IVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLKLSQV
Ga0308204_102998291	3300031092	Soil	KPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLRLIQFYIF
Ga0308204_103056001	3300031092	Soil	PIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTILYFS
Ga0308180_10379361	3300031100	Soil	KKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTILYFSKTKI
Ga0170824_1069228981	3300031231	Forest Soil	KKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKI
Ga0308194_103365041	3300031421	Soil	IVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTTLYFS
Ga0316043_1328991	3300031828	Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFLKKNIKLF
Ga0316049_1207771	3300031866	Soil	VLEMVKRERNKIITIDNSLKLRTILYFFFKKKYNLSFL
Ga0370544_21167_1_123	3300034447	Soil	RTLKKGLKVLEMVKRERNKIIIIDNSLKLRTILYFLKKKI
Ga0314785_003234_830_985	3300034479	Soil	KPIEKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTIFIKKLS
Ga0314785_012259_1_135	3300034479	Soil	KKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLILRTNLYF
Ga0314785_016219_53_181	3300034479	Soil	VKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTILYFSKTKI
Ga0314789_014138_414_536	3300034480	Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTIFIKKLS
Ga0370548_151036_357_500	3300034644	Soil	IVKKYSNGKVKRTLKKGLKVLEMVKRERNKIIIIDNSLKLSTILYFS
Ga0314780_176049_1_150	3300034659	Soil	KYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFKKKI
Ga0314782_116387_457_621	3300034661	Soil	KPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLKLRTILYFFFKKKI
Ga0314786_064947_10_138	3300034664	Soil	VKRTLKKGLKVLEMVKRERNKIITIDNSLILSLKDLLAFFCC
Ga0314796_044715_3_149	3300034671	Soil	KPIVKKYSNGKVKRTLKKGLKVLEMVKRERNKIITIDNSLILRTNLYF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079670

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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