Metagenome / Metatranscriptome Family F079708

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F079708
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	76 residues
Representative Sequence	VKTLILLPIYALMLFIASAVTVNAITFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Number of Associated Samples	73
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.04 %
% of genes near scaffold ends (potentially truncated)	26.09 %
% of genes from short scaffolds (< 2000 bps)	82.61 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (72.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (82.609 % of family members)
Environment Ontology (ENVO)	Unclassified (82.609 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.391 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 83.54% β-sheet: 0.00% Coil/Unstructured: 16.46%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00656	Peptidase_C14	20.87
PF01593	Amino_oxidase	5.22
PF13450	NAD_binding_8	4.35
PF13505	OMP_b-brl	1.74
PF08238	Sel1	0.87
PF13424	TPR_12	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	20.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.17 %
Unclassified	root	N/A	27.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.17 %
Unclassified	root	N/A	27.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.17 %
Unclassified	root	N/A	27.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	72.17 %
Unclassified	root	N/A	27.83 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	57.39 %
Unclassified	root	N/A	27.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.48 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	57.39 %
Unclassified	root	N/A	27.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6.09 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	57.39 %
Unclassified	root	N/A	27.83 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	6.09 %
Alphaproteobacteria bacterium SO-S41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium SO-S41	0.87 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	57.39 %
Unclassified	root	N/A	27.83 %
Limnohabitans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans	6.09 %
Alphaproteobacteria bacterium SO-S41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium SO-S41	0.87 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	57.39 %
Unclassified	root	N/A	27.83 %
unclassified Limnohabitans	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans	6.09 %
Alphaproteobacteria bacterium SO-S41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium SO-S41	0.87 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	57.39 %
Unclassified	root	N/A	27.83 %
Limnohabitans sp. 63ED37-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 63ED37-2	6.09 %
Alphaproteobacteria bacterium SO-S41	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium SO-S41	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2006543006\|2006909938	Not Available	754	Open in IMG/M
3300003409\|JGI26088J50261_1023864	Not Available	1466	Open in IMG/M
3300003410\|JGI26086J50260_1055285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	895	Open in IMG/M
3300003410\|JGI26086J50260_1123610	Not Available	501	Open in IMG/M
3300006874\|Ga0075475_10377717	Not Available	573	Open in IMG/M
3300009000\|Ga0102960_1158015	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M
3300009027\|Ga0102957_1268099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	620	Open in IMG/M
3300012528\|Ga0129352_10998726	Not Available	562	Open in IMG/M
3300016724\|Ga0182048_1022015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1063	Open in IMG/M
3300016731\|Ga0182094_1264046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	790	Open in IMG/M
3300016745\|Ga0182093_1157767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1255	Open in IMG/M
3300016745\|Ga0182093_1498151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	536	Open in IMG/M
3300016745\|Ga0182093_1621682	All Organisms → cellular organisms → Bacteria → Proteobacteria	1299	Open in IMG/M
3300016745\|Ga0182093_1846178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	539	Open in IMG/M
3300016747\|Ga0182078_10085151	Not Available	524	Open in IMG/M
3300016747\|Ga0182078_10441219	Not Available	548	Open in IMG/M
3300017818\|Ga0181565_10195064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 63ED37-2	1395	Open in IMG/M
3300017824\|Ga0181552_10024291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3768	Open in IMG/M
3300017824\|Ga0181552_10067048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2060	Open in IMG/M
3300017824\|Ga0181552_10162043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1182	Open in IMG/M
3300017824\|Ga0181552_10319430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	761	Open in IMG/M
3300017824\|Ga0181552_10536135	Not Available	548	Open in IMG/M
3300017949\|Ga0181584_10253477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1139	Open in IMG/M
3300017949\|Ga0181584_10878592	Not Available	527	Open in IMG/M
3300017950\|Ga0181607_10055406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2665	Open in IMG/M
3300017950\|Ga0181607_10089129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1973	Open in IMG/M
3300017950\|Ga0181607_10447717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	697	Open in IMG/M
3300017951\|Ga0181577_10912720	Not Available	523	Open in IMG/M
3300017952\|Ga0181583_10132280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1681	Open in IMG/M
3300017956\|Ga0181580_10724063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
3300017957\|Ga0181571_10057985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2680	Open in IMG/M
3300017957\|Ga0181571_10073502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2338	Open in IMG/M
3300017957\|Ga0181571_10628369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	647	Open in IMG/M
3300017957\|Ga0181571_10732382	Not Available	589	Open in IMG/M
3300017958\|Ga0181582_10060705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2830	Open in IMG/M
3300017958\|Ga0181582_10108790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1987	Open in IMG/M
3300017962\|Ga0181581_10929195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300017964\|Ga0181589_10034741	All Organisms → cellular organisms → Bacteria → Proteobacteria	3853	Open in IMG/M
3300017964\|Ga0181589_10815658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	577	Open in IMG/M
3300017967\|Ga0181590_10795050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	630	Open in IMG/M
3300017967\|Ga0181590_10962273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	558	Open in IMG/M
3300017968\|Ga0181587_10473539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	817	Open in IMG/M
3300017968\|Ga0181587_10961183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	526	Open in IMG/M
3300017969\|Ga0181585_10541698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	777	Open in IMG/M
3300017985\|Ga0181576_10024545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4169	Open in IMG/M
3300017986\|Ga0181569_10944533	Not Available	559	Open in IMG/M
3300018036\|Ga0181600_10034560	Not Available	3392	Open in IMG/M
3300018036\|Ga0181600_10438471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	628	Open in IMG/M
3300018036\|Ga0181600_10542037	Not Available	548	Open in IMG/M
3300018036\|Ga0181600_10605266	Not Available	511	Open in IMG/M
3300018036\|Ga0181600_10623120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	501	Open in IMG/M
3300018039\|Ga0181579_10615338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	560	Open in IMG/M
3300018041\|Ga0181601_10259658	Not Available	983	Open in IMG/M
3300018041\|Ga0181601_10426739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	703	Open in IMG/M
3300018041\|Ga0181601_10505722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 63ED37-2	629	Open in IMG/M
3300018048\|Ga0181606_10261005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	974	Open in IMG/M
3300018048\|Ga0181606_10691864	Not Available	517	Open in IMG/M
3300018049\|Ga0181572_10434832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	816	Open in IMG/M
3300018049\|Ga0181572_10578994	Not Available	684	Open in IMG/M
3300018049\|Ga0181572_10720028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	599	Open in IMG/M
3300018410\|Ga0181561_10188789	Not Available	1020	Open in IMG/M
3300018410\|Ga0181561_10318890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	720	Open in IMG/M
3300018413\|Ga0181560_10442342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	594	Open in IMG/M
3300018415\|Ga0181559_10173043	Not Available	1255	Open in IMG/M
3300018416\|Ga0181553_10723837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	519	Open in IMG/M
3300018417\|Ga0181558_10302068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	874	Open in IMG/M
3300018417\|Ga0181558_10724527	Not Available	505	Open in IMG/M
3300018418\|Ga0181567_10066208	All Organisms → cellular organisms → Bacteria → Proteobacteria	2525	Open in IMG/M
3300018420\|Ga0181563_10131952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 63ED37-2	1593	Open in IMG/M
3300018420\|Ga0181563_10140372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1532	Open in IMG/M
3300018423\|Ga0181593_10105125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2312	Open in IMG/M
3300018424\|Ga0181591_10059332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 63ED37-2	3196	Open in IMG/M
3300018424\|Ga0181591_10559437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	825	Open in IMG/M
3300018428\|Ga0181568_10206668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1625	Open in IMG/M
3300018428\|Ga0181568_10227602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1538	Open in IMG/M
3300018428\|Ga0181568_10283464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1355	Open in IMG/M
3300018428\|Ga0181568_10306135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1295	Open in IMG/M
3300018428\|Ga0181568_11368633	Not Available	526	Open in IMG/M
3300018876\|Ga0181564_10403561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 63ED37-2	744	Open in IMG/M
3300019459\|Ga0181562_10603871	Not Available	512	Open in IMG/M
3300020014\|Ga0182044_1073780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2313	Open in IMG/M
3300020053\|Ga0181595_10151968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1064	Open in IMG/M
3300020053\|Ga0181595_10204622	Not Available	865	Open in IMG/M
3300020056\|Ga0181574_10567964	Not Available	622	Open in IMG/M
3300020173\|Ga0181602_10093131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1496	Open in IMG/M
3300020177\|Ga0181596_10106274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1402	Open in IMG/M
3300020177\|Ga0181596_10316494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	622	Open in IMG/M
3300020178\|Ga0181599_1004548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 63ED37-2	11081	Open in IMG/M
3300020188\|Ga0181605_10102496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1447	Open in IMG/M
3300020191\|Ga0181604_10135323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1268	Open in IMG/M
3300020191\|Ga0181604_10495838	Not Available	504	Open in IMG/M
3300020194\|Ga0181597_10395395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	583	Open in IMG/M
3300020393\|Ga0211618_10261767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	582	Open in IMG/M
3300020406\|Ga0211668_10396845	Not Available	516	Open in IMG/M
3300020422\|Ga0211702_10085087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	885	Open in IMG/M
3300020810\|Ga0181598_1020715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3860	Open in IMG/M
3300021425\|Ga0213866_10304995	Not Available	798	Open in IMG/M
3300021964\|Ga0222719_10241968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1205	Open in IMG/M
3300022900\|Ga0255771_1074746	All Organisms → cellular organisms → Bacteria → Proteobacteria	1710	Open in IMG/M
3300022923\|Ga0255783_10374709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300022925\|Ga0255773_10033680	All Organisms → cellular organisms → Bacteria → Proteobacteria	3264	Open in IMG/M
3300022926\|Ga0255753_1030578	Not Available	3478	Open in IMG/M
3300023108\|Ga0255784_10386025	Not Available	670	Open in IMG/M
3300023116\|Ga0255751_10429699	Not Available	645	Open in IMG/M
3300023119\|Ga0255762_10155138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1310	Open in IMG/M
3300023175\|Ga0255777_10144692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1481	Open in IMG/M
3300023178\|Ga0255759_10382099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	860	Open in IMG/M
3300023273\|Ga0255763_1214670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	745	Open in IMG/M
3300025608\|Ga0209654_1002718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	11715	Open in IMG/M
3300025608\|Ga0209654_1021646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. 63ED37-2	2370	Open in IMG/M
3300025608\|Ga0209654_1156984	Not Available	545	Open in IMG/M
3300025617\|Ga0209138_1045811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1609	Open in IMG/M
3300025617\|Ga0209138_1096954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium SO-S41	874	Open in IMG/M
3300025695\|Ga0209653_1020602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3073	Open in IMG/M
3300031785\|Ga0310343_10091927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1931	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.26%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.74%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	91.30%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.48%
Coastal	Environmental → Aquatic → Marine → Coastal	2.61%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.74%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.87%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	82.61%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	8.70%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	82.61%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	8.70%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.61%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.74%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.74%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.87%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.87%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2006543006	Marine microbial communities from anoxic basin of Saanich Inlet - SI040908_100	Environmental	Open in IMG/M
3300003409	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA	Environmental	Open in IMG/M
3300003410	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300012528	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016724	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011507AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016731	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016745	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020014	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011503CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020393	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)	Environmental	Open in IMG/M
3300020406	Marine microbial communities from Tara Oceans - TARA_B100000886 (ERX555926-ERR599024)	Environmental	Open in IMG/M
3300020422	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_076 - TARA_B100000513 (ERX555999-ERR599126)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022900	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG	Environmental	Open in IMG/M
3300022923	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300023273	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG	Environmental	Open in IMG/M
3300025608	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025617	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025695	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2007059206	2006543006	Marine	KLILLPVYVVILFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSVEDRICPLLGL
JGI26088J50261_10238643	3300003409	Marine	LRLFVAPIYLAIVLAGIMVVVNVITFDYPGVCPSTLARAEFQKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL*
JGI26086J50260_10552852	3300003410	Marine	VGVAVKTLILLPIYALMLFIASAVTVNAITFEYMGVCPPALARAEYQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL*
JGI26086J50260_11236101	3300003410	Marine	VKLILLPVYVVILFIASAVTVNAITFEYMGVCPPALARAEFQKXXLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL*
Ga0075475_103777171	3300006874	Aqueous	ALMLFIASAVTVNVITFDYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAVEDQVCPLLGL*
Ga0102960_11580152	3300009000	Pond Water	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLFEGEQGHLGTEIRDIVLAAETQLCPLLGL*
Ga0102957_12680992	3300009027	Pond Water	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL*
Ga0129352_109987261	3300012528	Aqueous	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQVCPLLGL*
Ga0182048_10220151	3300016724	Salt Marsh	LKLLLIPVYIVILFVAVAVTVNAITFDYIGICPPTLARAEFQKEQLFSLLEGEQGHLGTEIRDIVLSVEDRICPLLGL
Ga0182094_12640462	3300016731	Salt Marsh	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPGMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0182093_11577672	3300016745	Salt Marsh	LKLLLIPVYIVILFVAVAVTVNAITFDYVGICPPTLARAEFQKEQLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0182093_14981512	3300016745	Salt Marsh	VGVAVKTLILLPIYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDKICPLLGL
Ga0182093_16216821	3300016745	Salt Marsh	ASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0182093_18461782	3300016745	Salt Marsh	MLFIASAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGQQGHLGSEIRDIVLAVEDQVCPLLGL
Ga0182078_100851512	3300016747	Salt Marsh	RTVGFELRLVLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0182078_104412192	3300016747	Salt Marsh	VKLILLPVYVVILFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0181565_101950641	3300017818	Salt Marsh	MGVEVKLLILSPLYAMMLFIASAVTVNAMTFEYMGICPPALVRAEFQKDQLFSLLEGEQGHLGTELRDIVLSAEEKICPLLGL
Ga0181552_100242912	3300017824	Salt Marsh	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQLCPLLGL
Ga0181552_100670482	3300017824	Salt Marsh	LKLLLIPVYIVILFVAVAVTVNAITFDYVGICPPTLARAEFQKEQLFSLLEGEQGHMGTEIRDIMLAVEDQVCPLLGL
Ga0181552_101620433	3300017824	Salt Marsh	MLFIASAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGQQGHLGTEIRDIVLAVEDQVCPLLGL
Ga0181552_103194301	3300017824	Salt Marsh	VKTLILLPIYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0181552_105361351	3300017824	Salt Marsh	VKLILLPVYVVILFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSVEDRICPLLGL
Ga0181584_102534772	3300017949	Salt Marsh	VLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0181584_108785921	3300017949	Salt Marsh	VKLILLPVYVVILFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDKICPLLGL
Ga0181607_100554064	3300017950	Salt Marsh	VKTLILLPIYALMLFIASAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGQQGHLGTEIRDIVLAVEDQVCPLLGL
Ga0181607_100891292	3300017950	Salt Marsh	MLFIASAVIVNAITFEYMGICPPAMARAELEKDKLFSLLEGQQGHLGTEIRDIVLAVEDQVCPLLGL
Ga0181607_104477171	3300017950	Salt Marsh	LKLLLIPVYIVILFVAVAVTVNAITFDYVGICPPTLARAEFQKEQLFSLLEGEQGHLGTEIRDIMLAVEDQVCPLLGL
Ga0181577_109127201	3300017951	Salt Marsh	VKLILLPIYVVILFIASAVTVNAITFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTELRDVVLSAEDKICPILGL
Ga0181583_101322802	3300017952	Salt Marsh	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0181580_107240632	3300017956	Salt Marsh	LRLFVAPIYLAIVLAGIMVVVNVITFDYPGICPSTLARAEFQKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0181571_100579852	3300017957	Salt Marsh	LRLLLLPIYVLVIFIGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0181571_100735022	3300017957	Salt Marsh	VKTLILLPIYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRISPLLGL
Ga0181571_106283692	3300017957	Salt Marsh	MLFIASAVTVNAITFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0181571_107323821	3300017957	Salt Marsh	VKLILLPVYVVILFIASAVTVNAITFEYMGVCAPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSVEDRICPLLGL
Ga0181582_100607052	3300017958	Salt Marsh	LRLVLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQLCPLLGL
Ga0181582_101087902	3300017958	Salt Marsh	LRLVLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0181581_109291951	3300017962	Salt Marsh	LKLLLIPVYIVILFVAVAVTVNAITFDYIGICPPTLARAEFQKEQLFSLLEGEQGHQGTEIRDVVLAIEDQVCPL
Ga0181589_100347412	3300017964	Salt Marsh	VKTLILLPIYALMLFIASAVTVNAITFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0181589_108156582	3300017964	Salt Marsh	VGVAVKTLILFPIYALMLFIASAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLSVEDRICPLLGL
Ga0181590_107950501	3300017967	Salt Marsh	VKTLILLPLYALMLFIASAVTVNAITFEYMGICPPAVARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLG
Ga0181590_109622731	3300017967	Salt Marsh	VGVAVKTLILLPIYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0181587_104735391	3300017968	Salt Marsh	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQLCPLLGF
Ga0181587_109611832	3300017968	Salt Marsh	VGVAVKTLILFPIYALMLFIASAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGQQGHLGTEIRDIVLAVEDQVCPLLGL
Ga0181585_105416982	3300017969	Salt Marsh	VGVAVKTLILLPLYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDKICPLLGL
Ga0181576_100245453	3300017985	Salt Marsh	VLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQLCPLLGL
Ga0181569_109445331	3300017986	Salt Marsh	VKLILLPIYVVILFLASAVTVNAITFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTELRDVVLSAEDKICPILGL
Ga0181600_100345601	3300018036	Salt Marsh	AVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQLCPLLG
Ga0181600_104384712	3300018036	Salt Marsh	VKTLILFPIYALMLFIASAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGQQGHLGTEIRDIVLAVEDQVCPLLGL
Ga0181600_105420371	3300018036	Salt Marsh	PIYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0181600_106052662	3300018036	Salt Marsh	PIYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDKICPLLGL
Ga0181600_106231202	3300018036	Salt Marsh	VKTLILLPLYALMLFIASAVTVNAITFEYMGICPPAVARVEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0181579_106153381	3300018039	Salt Marsh	VGVAVKTLILLPIYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAED
Ga0181601_102596582	3300018041	Salt Marsh	LRLVLLPIYVLVIFVGAAVTVNAITFEYMGICPSAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEGQVCPLLGL
Ga0181601_104267392	3300018041	Salt Marsh	LKLLLIPVYIVILFVAVAVTVNAITFDYIGICPPTLARAEFQKEQLFSLLEGEQGHLGTEIRDIMLAVEDQVCPLLGL
Ga0181601_105057222	3300018041	Salt Marsh	ILLPLYALMLFIASAVTVNAITFEYMGICPPAVARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0181606_102610052	3300018048	Salt Marsh	VKTLILLPIYALMLFIASAVTVNVITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAVEDQVCPLLGL
Ga0181606_106918642	3300018048	Salt Marsh	MVVVNVITFDYPGICPSTLARAEFQKDKLFSLLEGEQGHLGTEIRDIVLAVEDQVCPILG
Ga0181572_104348321	3300018049	Salt Marsh	MLFIASAVLVNAITFEYMGICPPAMARAEFEKDKLFSLLEGQQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0181572_105789941	3300018049	Salt Marsh	RLVLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQLCPLLGL
Ga0181572_107200282	3300018049	Salt Marsh	MMLFIASAVTVNAMTFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTELRDIVLSAEEKICPLLGL
Ga0181561_101887891	3300018410	Salt Marsh	LKLLILMPLYALMLFIASAVLVNAITFEYMGICPPAMARAELEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0181561_103188902	3300018410	Salt Marsh	VRLVLLPVYAVLLFIALAVTVNAITFEYMGICPPALARAEFQKDQLFSFLEGEQGHLGTEIRDIILSAEDRICPLLGL
Ga0181560_104423422	3300018413	Salt Marsh	LKLLLIPVYIVILFVAVAVTVNAITFDYIGICPPTLARAEFQKEQLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0181559_101730433	3300018415	Salt Marsh	LLPIYVLVIFIGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0181553_107238371	3300018416	Salt Marsh	MGVAVKTLILLPIYALMLFIASAVTVNVITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAVEDQVCPLLGL
Ga0181558_103020682	3300018417	Salt Marsh	VGVTLKLLILMPLYALMLFIASAVLVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAMEDQVCPLLGL
Ga0181558_107245272	3300018417	Salt Marsh	FIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0181567_100662082	3300018418	Salt Marsh	VGVAVKTLILFPIYALMLFIASAVTVNAITFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSVEDRICPLLGL
Ga0181563_101319522	3300018420	Salt Marsh	VVILFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSVEDRICPLLGL
Ga0181563_101403722	3300018420	Salt Marsh	MLFIASAVTVNAITFENMGICPPAMARASFEKDKLFSLLEGQQGHLGTEIRDIVLAVEDQVCPLLGL
Ga0181593_101051254	3300018423	Salt Marsh	FVGAAVTVNAITFEYMGICPSAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0181591_100593322	3300018424	Salt Marsh	VVILFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0181591_105594371	3300018424	Salt Marsh	VKTLILLPIYALMLFIASAVTVNAITFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAED
Ga0181568_102066682	3300018428	Salt Marsh	VGVAVKTLILLPIYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRISPLLGL
Ga0181568_102276022	3300018428	Salt Marsh	LKLLILMPLYALMLFIASAVLVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAMEDQVCPLLGL
Ga0181568_102834642	3300018428	Salt Marsh	VLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDSVLAAETQLCPLLGL
Ga0181568_103061352	3300018428	Salt Marsh	GVEVTLLILMPLYTMLLFTATAVTVNAITFEYMGMCPPAKARAEFEKDKLFSLLEGQQGHLGTEIRDMVLAVEDRVCPILGL
Ga0181568_113686332	3300018428	Salt Marsh	VKLILLPVYVVILFIASAVTVNAITFVYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSVEDRICPLLGL
Ga0181564_104035612	3300018876	Salt Marsh	VKLILLPVYVVILFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSVEDRICPVLGL
Ga0181562_106038712	3300019459	Salt Marsh	VTLKLLILMPLYALMLFIASAVIVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0182044_10737801	3300020014	Salt Marsh	LRLVLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQV
Ga0181595_101519682	3300020053	Salt Marsh	MLFIASAVTVNVITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAVEDQVCPLLGL
Ga0181595_102046221	3300020053	Salt Marsh	LLPIYALMLFIASAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGQQGHLGTEIRDIVLAVEDQVCPLLGL
Ga0181574_105679642	3300020056	Salt Marsh	IYALMLFIASAVTVNAITFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSVEDRICPLLGL
Ga0181602_100931312	3300020173	Salt Marsh	VLLPIYVLVIFVGAAVTVNAITFEYMGICPSAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEGQVCPLLGL
Ga0181596_101062743	3300020177	Salt Marsh	VKTLILLPIYALMLFIASAVTVNVITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIMLAVEDQVCPLLGL
Ga0181596_103164942	3300020177	Salt Marsh	VGVAVKTLILLPLYALMLFIASAVTVNAITFEYMGICPPAVARVEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0181599_10045489	3300020178	Salt Marsh	ELRLVLLPIYVPVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQLCPLLGL
Ga0181605_101024962	3300020188	Salt Marsh	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEGQVCPLLGL
Ga0181604_101353231	3300020191	Salt Marsh	LFVAVAVTVNAITFDYIGICPPTLARAEFQKEQLFSLLEGEQGHLGTEIRDIMLAVED
Ga0181604_104958381	3300020191	Salt Marsh	GAAVTVNAITFEYMGICPSAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEGQVCPLLGL
Ga0181597_103953951	3300020194	Salt Marsh	VKALILLPIYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0211618_102617671	3300020393	Marine	VRLLILLPLYVLMLFIASAVTVNTITFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTEVRDMVLAVEDRVCPILGL
Ga0211668_103968452	3300020406	Marine	VGSAVKLLISMPLYALMLFIASAVTVNVITFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTETRDLVLSAQDKICPLLGL
Ga0211702_100850871	3300020422	Marine	VKLLILIPLYALMLFIASAVTVNAITFEYMGICPPALARAEFEKDKLFSLLEGQEGHLGTEIRDIVLALEDQICPILGL
Ga0181598_10207152	3300020810	Salt Marsh	VLLPIYVPVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQLCPLLGL
Ga0213866_103049952	3300021425	Seawater	VKTLILLPIYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSVEDRICPLLGL
Ga0222719_102419682	3300021964	Estuarine Water	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLFEGEQGHLGTEIRDIVLAAETQLCPLLGL
Ga0255771_10747462	3300022900	Salt Marsh	VKTLILLPIYALMLFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDKICPLLGL
Ga0255783_103747092	3300022923	Salt Marsh	LIPVYIVILFVAVAVTVNAITFDYVGICPPTLARAEFQKEQLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0255773_100336802	3300022925	Salt Marsh	LKLLLIPVYIVILFVAVAVTVNAITFDYIGICPPTLARAEFQKEQLFSLLEGEQGHMGTEIRDIMLAVEDQVCPLLGL
Ga0255753_10305785	3300022926	Salt Marsh	HDVGQHRTVGFELRLVLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQLCPLLGL
Ga0255784_103860251	3300023108	Salt Marsh	TVGFELRLVLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0255751_104296991	3300023116	Salt Marsh	VGVAVKTLILLPIYALMLFIASAVTVNAITFEYMGICPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0255762_101551382	3300023119	Salt Marsh	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDELFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0255777_101446922	3300023175	Salt Marsh	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAIEDQVCPLLGL
Ga0255759_103820991	3300023178	Salt Marsh	VLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDELFSLLEGEQGHLGTEIRDIVLAIEDQVCPLLGL
Ga0255763_12146702	3300023273	Salt Marsh	MLFIASAVTVNAITFEYMGICPPAVARVEFQKDQLFSLLEGEQGHLGTEIRDIVLSAED
Ga0209654_10027187	3300025608	Marine	LAIVLAGIMVVVNVITFDYPGVCPSTLARAEFQKDKLFSLLEGEQGHLGTEIRDVVLAIEDQVCPLLGL
Ga0209654_10216461	3300025608	Marine	VKLILLPVYVVILFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSVEDWICPLLGL
Ga0209654_11569841	3300025608	Marine	IAGIYPRCRQSLFCGLSDSHDVGQHRTVGFELRLVLLPIYVLVIFVGAAVTVNAITFEYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQLCPLLGL
Ga0209138_10458112	3300025617	Marine	VGVAVKTLILLPIYALMLFIASAVTVNAITFEYMGVCPPALARAEYQKDQLFSLLEGEQGHLGTEIRDIVLSAEDRICPLLGL
Ga0209138_10969541	3300025617	Marine	LFIASAVTVNAITFEYMGVCPPALARAEFQKDQLFSLLEGEQGHLGTEIRDIVLSVEDWICPLLGL
Ga0209653_10206023	3300025695	Marine	LRLVLLPIYVLVIFVGAAVTVNAITFKYMGICPPAMARAEFEKDKLFSLLEGEQGHLGTEIRDIVLAAETQVCPLLGL
Ga0310343_100919272	3300031785	Seawater	VKLLILIPLYALMLFIASAVTVNAITFEYMGICPPALARAEFEKDKLFSLLQGQEGHLGTEIRDIVLALEDQICPLLGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079708

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences