Metagenome / Metatranscriptome Family F079751

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Overview

Basic Information
Family ID	F079751
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	138 residues
Representative Sequence	MQTRPQGWLYMAAFAMLAAGCASISDTDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSARREDLVIARGQNATFEIDADSDDDVEIQWTCVGTANTERETVECPDETSWVRITRATGDDFLFECYGDRDGSSTRRARR
Number of Associated Samples	79
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.57 %
% of genes near scaffold ends (potentially truncated)	40.87 %
% of genes from short scaffolds (< 2000 bps)	92.17 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.130 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.609 % of family members)
Environment Ontology (ENVO)	Unclassified (34.783 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.913 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 6.40% β-sheet: 27.33% Coil/Unstructured: 66.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00873	ACR_tran	20.00
PF08028	Acyl-CoA_dh_2	4.35
PF00440	TetR_N	3.48
PF07394	DUF1501	3.48
PF10099	RskA	1.74
PF04052	TolB_N	0.87
PF07715	Plug	0.87
PF13472	Lipase_GDSL_2	0.87
PF01717	Meth_synt_2	0.87
PF11839	Alanine_zipper	0.87
PF02518	HATPase_c	0.87
PF07679	I-set	0.87
PF00753	Lactamase_B	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	4.35
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.87
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.13 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.13 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.13 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.74 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	80.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	77.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.74 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	77.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.74 %
Shewanellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae	0.87 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	77.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.74 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.87 %
Shewanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	77.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.74 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.87 %
Shewanella algae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → Shewanella algae	0.87 %
Unclassified	root	N/A	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2330848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1564	Open in IMG/M
3300000956\|JGI10216J12902_101880851	All Organisms → cellular organisms → Bacteria → Proteobacteria	1638	Open in IMG/M
3300000956\|JGI10216J12902_106287562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	920	Open in IMG/M
3300000956\|JGI10216J12902_113234588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	553	Open in IMG/M
3300000956\|JGI10216J12902_126636955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1259	Open in IMG/M
3300004114\|Ga0062593_102204466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	617	Open in IMG/M
3300004157\|Ga0062590_102174713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	580	Open in IMG/M
3300004463\|Ga0063356_103027722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	724	Open in IMG/M
3300004463\|Ga0063356_103188153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	707	Open in IMG/M
3300004480\|Ga0062592_100849338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	816	Open in IMG/M
3300005093\|Ga0062594_100599959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	965	Open in IMG/M
3300005093\|Ga0062594_102972100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → Shewanella algae	529	Open in IMG/M
3300005336\|Ga0070680_100229522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1568	Open in IMG/M
3300005336\|Ga0070680_100246110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1512	Open in IMG/M
3300005341\|Ga0070691_10310636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	864	Open in IMG/M
3300005353\|Ga0070669_101818698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	531	Open in IMG/M
3300005440\|Ga0070705_100350184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1077	Open in IMG/M
3300005444\|Ga0070694_100307900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1216	Open in IMG/M
3300005444\|Ga0070694_101358658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	599	Open in IMG/M
3300005545\|Ga0070695_101656615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	535	Open in IMG/M
3300005578\|Ga0068854_101335131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	646	Open in IMG/M
3300006844\|Ga0075428_102748128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	501	Open in IMG/M
3300006865\|Ga0073934_10001926	All Organisms → cellular organisms → Bacteria → Proteobacteria	46365	Open in IMG/M
3300006876\|Ga0079217_10618643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	707	Open in IMG/M
3300006894\|Ga0079215_10916883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
3300006918\|Ga0079216_10777562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	698	Open in IMG/M
3300006918\|Ga0079216_11664681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	542	Open in IMG/M
3300007004\|Ga0079218_10509427	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300007004\|Ga0079218_10637938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	983	Open in IMG/M
3300009094\|Ga0111539_10488538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1434	Open in IMG/M
3300009148\|Ga0105243_10492522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1160	Open in IMG/M
3300009156\|Ga0111538_13640773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	534	Open in IMG/M
3300009609\|Ga0105347_1129419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	973	Open in IMG/M
3300009610\|Ga0105340_1351783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	652	Open in IMG/M
3300010399\|Ga0134127_10019588	All Organisms → cellular organisms → Bacteria	5217	Open in IMG/M
3300010399\|Ga0134127_10332610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1476	Open in IMG/M
3300010399\|Ga0134127_10585858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1142	Open in IMG/M
3300010403\|Ga0134123_10157817	All Organisms → cellular organisms → Bacteria → Proteobacteria	1885	Open in IMG/M
3300011332\|Ga0126317_10586998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	634	Open in IMG/M
3300011332\|Ga0126317_10869279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	592	Open in IMG/M
3300011333\|Ga0127502_10100212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	516	Open in IMG/M
3300011333\|Ga0127502_10115853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	748	Open in IMG/M
3300011333\|Ga0127502_10769520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	561	Open in IMG/M
3300011333\|Ga0127502_11028845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	528	Open in IMG/M
3300011333\|Ga0127502_11217907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	586	Open in IMG/M
3300011333\|Ga0127502_11233926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1079	Open in IMG/M
3300011439\|Ga0137432_1083633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	986	Open in IMG/M
3300011440\|Ga0137433_1065089	All Organisms → cellular organisms → Bacteria → Acidobacteria	1100	Open in IMG/M
3300011445\|Ga0137427_10441549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	538	Open in IMG/M
3300012167\|Ga0137319_1108634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	558	Open in IMG/M
3300012212\|Ga0150985_121108283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	883	Open in IMG/M
3300012943\|Ga0164241_10897112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	648	Open in IMG/M
3300014272\|Ga0075327_1028873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1652	Open in IMG/M
3300014326\|Ga0157380_10313381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1451	Open in IMG/M
3300015371\|Ga0132258_12363811	All Organisms → cellular organisms → Bacteria → Acidobacteria	1332	Open in IMG/M
3300015371\|Ga0132258_12807588	All Organisms → cellular organisms → Bacteria → Proteobacteria	1213	Open in IMG/M
3300018422\|Ga0190265_10258886	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300018422\|Ga0190265_10494047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1335	Open in IMG/M
3300018422\|Ga0190265_10668808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1159	Open in IMG/M
3300018429\|Ga0190272_11943732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	620	Open in IMG/M
3300018469\|Ga0190270_10991941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	865	Open in IMG/M
3300018469\|Ga0190270_11085234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	833	Open in IMG/M
3300018469\|Ga0190270_11169242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	806	Open in IMG/M
3300018476\|Ga0190274_10203237	All Organisms → cellular organisms → Bacteria → Proteobacteria	1744	Open in IMG/M
3300018476\|Ga0190274_10657927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1085	Open in IMG/M
3300018481\|Ga0190271_10001186	All Organisms → cellular organisms → Bacteria	14506	Open in IMG/M
3300018481\|Ga0190271_13847629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	502	Open in IMG/M
3300019238\|Ga0180112_1203338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	588	Open in IMG/M
3300019377\|Ga0190264_11236920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	624	Open in IMG/M
3300020065\|Ga0180113_1376194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300020146\|Ga0196977_1039007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1141	Open in IMG/M
3300025899\|Ga0207642_10408623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	814	Open in IMG/M
3300025917\|Ga0207660_10134276	All Organisms → cellular organisms → Bacteria → Proteobacteria	1887	Open in IMG/M
3300025917\|Ga0207660_10197372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1570	Open in IMG/M
3300025935\|Ga0207709_10050694	All Organisms → cellular organisms → Bacteria → Proteobacteria	2540	Open in IMG/M
3300025942\|Ga0207689_10230311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1531	Open in IMG/M
3300026089\|Ga0207648_10088060	All Organisms → cellular organisms → Bacteria → Proteobacteria	2710	Open in IMG/M
3300027876\|Ga0209974_10395467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	542	Open in IMG/M
3300027886\|Ga0209486_10897699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	587	Open in IMG/M
3300028380\|Ga0268265_11341734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	716	Open in IMG/M
3300028812\|Ga0247825_10188741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1423	Open in IMG/M
3300028812\|Ga0247825_10504507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	861	Open in IMG/M
3300028812\|Ga0247825_11116215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	574	Open in IMG/M
3300031184\|Ga0307499_10226054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	587	Open in IMG/M
3300031455\|Ga0307505_10045968	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300031538\|Ga0310888_10230612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1031	Open in IMG/M
3300031562\|Ga0310886_11094209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	514	Open in IMG/M
3300031731\|Ga0307405_10988651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	717	Open in IMG/M
3300031820\|Ga0307473_11498047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300031852\|Ga0307410_10892178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	761	Open in IMG/M
3300031903\|Ga0307407_11192907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	594	Open in IMG/M
3300031908\|Ga0310900_11509609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	567	Open in IMG/M
3300031911\|Ga0307412_11391276	Not Available	635	Open in IMG/M
3300031913\|Ga0310891_10281470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	582	Open in IMG/M
3300031995\|Ga0307409_102305863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	568	Open in IMG/M
3300032002\|Ga0307416_100456522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1332	Open in IMG/M
3300032003\|Ga0310897_10476498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	602	Open in IMG/M
3300032004\|Ga0307414_11008069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	767	Open in IMG/M
3300032005\|Ga0307411_10286226	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300032017\|Ga0310899_10558717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	568	Open in IMG/M
3300032075\|Ga0310890_10604649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	849	Open in IMG/M
3300032144\|Ga0315910_10040507	All Organisms → cellular organisms → Bacteria	3402	Open in IMG/M
3300032144\|Ga0315910_10063780	All Organisms → cellular organisms → Bacteria → Proteobacteria	2681	Open in IMG/M
3300032144\|Ga0315910_10100220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	2127	Open in IMG/M
3300032144\|Ga0315910_10126179	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300032144\|Ga0315910_10167128	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300032144\|Ga0315910_10561723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	883	Open in IMG/M
3300032144\|Ga0315910_11305138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	566	Open in IMG/M
3300032157\|Ga0315912_10051996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3245	Open in IMG/M
3300032157\|Ga0315912_10155208	All Organisms → cellular organisms → Bacteria → Proteobacteria	1794	Open in IMG/M
3300032157\|Ga0315912_10324979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1214	Open in IMG/M
3300032157\|Ga0315912_10688281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	814	Open in IMG/M
3300032179\|Ga0310889_10557815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	587	Open in IMG/M
3300032180\|Ga0307471_102093673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	711	Open in IMG/M
3300034667\|Ga0314792_174632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	589	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.39%
Host-Associated	Host-Associated	22.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.61%
Plants	Host-Associated → Plants	22.61%
Aquatic	Environmental → Aquatic	14.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.57%
Freshwater	Environmental → Aquatic → Freshwater	8.70%
Sediment	Environmental → Aquatic → Sediment	5.22%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.17%
Loam	Environmental → Terrestrial → Soil → Loam	7.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	6.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.74%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.87%
Sand	Environmental → Terrestrial → Soil → Sand	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.43%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	6.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.74%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.43%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	6.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.09%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.48%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.87%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.87%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23308481	3300000033	Soil	AALFAAGCVSPQTSDEDARTARLPTGVTLLDSNRETCSGPVAIDDRVIAGAREDLVVQRGENATFDIDAQDEEDNVEIRWTCVGDVAAEREAVRCPDDTSHVRITRATGNDFLLECYGNRGSSTSRARR*
JGI10216J12902_1018808512	3300000956	Soil	MQKRPQGWLYLSAFAVLASGCALTTTTDDDRSARLPTGVTLLESDRSECEGSVAIDESVVASARRADLVIQRGANATFEIDADDEDVEIEWTCVGANDTERNTAECPEETSHVRITRAATGDELVLECYGDGESASRARR*
JGI10216J12902_1062875622	3300000956	Soil	MQARPQGLVFLTAFVVLGTGCATTGTNNDDARTARLPTGITLLESNREQCAGSVAIDDASIASARRSDLVISRGQNAVFEVEENDDDIEVGWTCVGAADADRERIECPDDTSHVRITRGSTGDEFLLECYGDRDSNRR*
JGI10216J12902_1132345881	3300000956	Soil	MQTRPQGWVYLAAVAMLAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAVEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRR
JGI10216J12902_1266369552	3300000956	Soil	MQMRPQGWLLLTAFAVLGAGCATTTTNDEDARTVTLPTGVTLLDSDRSKCEGSVAIDETAVAGARRADLVIQRGQNAVFELDTDADDDVEVDWTCVGSADTERNTLECPDDTSYVRVTRASTGDEFLLECYGDRDGSTSSRARR*
Ga0062593_1022044661	3300004114	Soil	MQTRPQGWVYLAAVAMLAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGTAKTERERIECPEDTSWVRISRATGDDFLLECYGDR
Ga0062590_1021747131	3300004157	Soil	MQTRPQGWIYMAAFAMFAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGTAKTERERIECPEDTSWVRISRATGDDFLLECYGDRGGSSTRRARR*
Ga0063356_1030277222	3300004463	Arabidopsis Thaliana Rhizosphere	MQTRPQGWLYMAAFAMLAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSSRREDLVIARGQNATFEINADDDDDVEIQWTCVGTANTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0063356_1031881532	3300004463	Arabidopsis Thaliana Rhizosphere	MQLRPQGWLYLTAFTVLGAGCVTTATDDNDGRSVRLPTGVTLLDSDRNECAGAVAIDESVLSSTRRSDLVIERGQNATFEVDADADEDVEIEWTCVGAADTDREAVECPDETSYVRITRGADDDFVLECYGDEDAARRARR*
Ga0062592_1008493382	3300004480	Soil	MQTRPQGWIYMAAFAMFAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEINADSDEDVEIQWTCVGTANTERERVECPEDTSWVRVTRATGDDFLFECYGDRGGDSTRRARR*
Ga0062594_1005999592	3300005093	Soil	MQTRPQGWLYMAAFAMLAAGCASISDTDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSARREDLVIARGQNATFEIDADSDDDVEIQWTCVGTANTERETVECPDETSWVRITRATGDDFLFECYGDR
Ga0062594_1029721001	3300005093	Soil	MQTRPQGWVFMAAVAMLAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0070680_1002295222	3300005336	Corn Rhizosphere	MQIRPQGWLYMAAFAMLAAGCASISDTDDQDARSARLPTGVTLLDSSREECGGSVAIDDSVIKSSRREDLVIARGQNATFEIDADSDDDVEVQWTCVGTANTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0070680_1002461102	3300005336	Corn Rhizosphere	MQTRPQGWLYMAAFAMLAAGCASISDTDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSARREDLVIARGQNATFEIDADSDDDVEIQWTCVGTANTERETVECPDETSWVRITRATGDDFLFECYGDRDGSSTRRARR*
Ga0070691_103106361	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	AFAMLAAGCASISDTDDQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0070669_1018186981	3300005353	Switchgrass Rhizosphere	MQTRPQGWIYMAAFAMFAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEINADSDEDVEIQWTCVGTANTERERVECPEDTSWVRVTRATGDDFLFECYGDRDGSSTRRARR*
Ga0070705_1003501842	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	TDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSARREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLLECYGDRGGSSTRRARR*
Ga0070694_1003079002	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MQTRPQGWLYMAAFAVLAAGCATTSENEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0070694_1013586582	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MQTRPQGWLYMAAFAMLAAGCASISDTDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSARREDLVIARGQNATFEIDADSDDDVEIQWTCVGTANTERERVECPEDTSWVRVTRATGDDFLFE
Ga0070695_1016566151	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ISDTDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSARREDLVIARGQNATFEIDADSDDDVEIQWTCVGTANTERETVECPDETSWVRITRATGDDFLFECYGDRDGSSTRRARR*
Ga0068854_1013351311	3300005578	Corn Rhizosphere	GCATTSENEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0075428_1027481281	3300006844	Populus Rhizosphere	MQMRPQGWFCLAAAALFAAGCVSPQTSDEDARTARLPTGVTLLDSNRETCSGPVAIDDRVIAGAREDLVVQRGENATFDIDAQDEEDNVEIRWTCVGDVAAEREAVRCPDDTSHVRITRATGNDFLLECYGNRGSSTSRARR*
Ga0073934_1000192639	3300006865	Hot Spring Sediment	MPTRPQGWLYLTTIAVLAAGCATVSTDDDARNARLPTGVTLLESDRNDCAGAIAIDERVVANAGRADLVVQRGQNATFEIDADDDDVEIEWTCVGSADTDRNSVECPEETSHVRVTRATTGDEFLLECYGDRDGSVSRRARR*
Ga0079217_106186431	3300006876	Agricultural Soil	MQLRPQSWIYLATFAVLGAGCAVTTTTDEDARNARLPTGVTLLESDRNECAGSVAIDEASIASARRSDLVIQRGQNAVFEIDVDDDDDVDIEWTCVGAADTDRETVECPDETSHVRITRASTGNEFLFECYGDRDNDRRVSRR*
Ga0079215_109168832	3300006894	Agricultural Soil	YLATFALLGAGCAVTTTTDEDARSARLPTGVTLLESDRNECAGSVAIDEASIASARRSDLVIQRGQNAVFEIDVDDDDDVEIEWTCVGAANTDRETVECPDETSHVRITRASTGNEFLLECYGDRDRRVSRR*
Ga0079216_107775621	3300006918	Agricultural Soil	MQIRPHGWFYMAALAVLTSGCAAFTSETDEQDARSARLPTGVTLLDSSREECEGSVALDDSVMASARREDLVVQRGQNATFEIDVDADEDVEIEWTCVGTANTERETIECPEETSWVRVTRASGDDFLLECYGEGAGSRRARR*
Ga0079216_116646811	3300006918	Agricultural Soil	MQLRPQGWLYLTAFAVLGTGCATTATDDNDGRSVRLPTGVTLLDSDRNECAGAVAIDESALGSTRRSDLVIERGQNATFEVDADADEDVEIEWTCVGAADTDREAVECPEETSYVRITRGADDDFVLECYGDEDAARRAR
Ga0079218_105094272	3300007004	Agricultural Soil	MQVRPMVSRPQGWLFLAAVAVLGAGCASPSRTTDEDAQAARLPTGVTLLDSNREECAGPVAIDDSLIAGAREDLVVQRGENATFELDADQDEDVAIRWTCVGSASAERESVGCPEETSHVRVTRATGNDFLLECYGNRGSSTSRARR*
Ga0079218_106379381	3300007004	Agricultural Soil	MQMRPQGWLYLTAFAVLGTGCAVTTTTDDDRTARLPTGITLLESDRAECDGSVTLDESIVASARRADLVIRPGANATFEIDADDDEDVEIEWTCVGDSDTARNTSECPGDTSHVRVT
Ga0111539_104885382	3300009094	Populus Rhizosphere	EQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAVEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0105243_104925221	3300009148	Miscanthus Rhizosphere	TTSENEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0111538_136407732	3300009156	Populus Rhizosphere	YLAAVAMLAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAVEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0105347_11294191	3300009609	Soil	MLLLEYTRFKTRKNLLKERDMQKRPQGWLYLTAFTVLAAGCAGTTTTADDRAARLPTGITLLESDRNECEGSVAFDESLVANARRADLVINRGANATFEIDSDTGEDVEIEWTCVGASDTERNINECPEETSHVRITRSATGDDFLLECYGDTDGSSS
Ga0105340_13517831	3300009610	Soil	MLLLEYTRFKTRKNLLKERDMQKRPQGWLYLTAFTVLAAGCAGTTTTADDRAARLPTGITLLESDRNECEGSVAFDESLVANARRADLVINRGANATFEIDSDTGEDVEIEWTCVGASDTERNINECPEETSHVRITR
Ga0134127_100195882	3300010399	Terrestrial Soil	MAAFAMLAAGCASISDTDDQDARSARLPTGVTLLDSSREECGGSVAIDDSVIKSSRREDLVIARGQNATFEIDADSDDDVEVQWTCVGTANTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0134127_103326101	3300010399	Terrestrial Soil	MQTRPQGWLYMAAFAMLAAGCASISDTDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSARREDLVIARGQNATFEIDAASDDDVEIQWTCVGTANTERETVECPDETSWVRITRATGDDFLFECYGDRDGSSTRRARR*
Ga0134127_105858582	3300010399	Terrestrial Soil	MAAFAMFAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEINADSDEDVEIQWTCVGTANTERERVECPEDTSWVRVTRATGDDFLFECYGDRGGDSTRRARR*
Ga0134123_101578172	3300010403	Terrestrial Soil	MAAFAVLAAGCATTSENEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0126317_105869981	3300011332	Soil	MQTRPQGWLYMAAFAVLAAGCASTSKTDETDARSARLPTGVTLLDSNKEECGGSVAIDDSVIKSARREDLVIARGQNATFELDARNDDDVEIQWTCVGSAKTERERVACPEDTSWVRVTRATGDDFLFECYGDRAGSSTRRARR*
Ga0126317_108692791	3300011332	Soil	QDARSARLPTGVTLLDSNREDCAGSVAIDDSVIASARREDLVIARGQNATFELNTKGNDDVEIDWTCVGSSKTAREKIECPEDTSWVRITRAAGDDFLLECYGQGSTARRARR*
Ga0127502_101002121	3300011333	Soil	QVRPQGWVYLTAFALLGAGCVTTATDDNDGRSVRLPTGVTLLDSDRSECEGAVAIDESIVASTRDSDFVIERGQNATFQVDADADDDDIEVEWTCVGAANTDRNALECPEETSYVRITRGADEEFLLECYGDRDGSSSSRARGPAPSSTSTPAAIRPWSSPTAADCPSRPP
Ga0127502_101158532	3300011333	Soil	MQLRPQGWLYLAAFTVLGAGCATTATDDNDGQSVRLPTGVTLLDSDRNECAGAVAIDESALGSTRRSDLVIERGQNATFEVDADADDDVEIEWTCVGAADTDRDAIECPDETSYVRIARGADDEFVLECYGDRDG*
Ga0127502_107695202	3300011333	Soil	VFVAAFTVFAAGCATTTTNDEDARATRLPTGVTLLESDRSECEGSVAIDERFVAGARRADLVVQRGQNAVFEIDAEDDNEVDIDWTCVGSSDTDEATVECPDETSHVRVTRASTGDEFLFECYGDRDDR*
Ga0127502_110288452	3300011333	Soil	QTRPQSWLYLSAFAVLSAGCAITTTTDEDARTARLPTGVTLLESDRGECEGAVAIDETAIASSRREDLVIQRGQNATFEVDFDADEDVDIDWTCVGVADAERETAECPEETTHVRITRATTGDEFLLECYGDGDGSRRARN*
Ga0127502_112179072	3300011333	Soil	LKERDMQKRPQNWLYLTAFAALSAGCALSTTTDDDRTARLPTGITLLESDRAECDGSVTLDESVVASARRADLVIRPGANATFEIDADNDEDVELEWTCVGESNTERNTSECPEDTSHVRITRASTGDELVLECYGDSGSSSRRARG*
Ga0127502_112339264	3300011333	Soil	DMQLRPQGWLYLTAFAVLGAGCVTTATDDNDGRSVRLPTGVTLLDSDRQECAGAVAIDESALGSTRRSDLVIERGQNATFEVDADADEDVEIEWTCVGAADTERDSVECPDETSYVRITRGADDDFVLECYGDEDAARRARR*
Ga0137432_10836332	3300011439	Soil	MLLLEYTRFKTRKNLLKERDMQKRPQGWLYLTTFTVLAAGCAGTTTTADDRAARLPTGITLLESDRNECEGSVAFDESLVANARRADLVINRGANATFEIDSDTGEDVEIEWTCVGASDTERNINECPEETSHVRITRSATGDDFLLECYGDTDGSSSRRARR*
Ga0137433_10650892	3300011440	Soil	MLLLEYTRFKTRKNLLKERDMQKRPQGWLYLTAFTVLAAGCAGTTTTADDRAARLPTGITLLESDRNECEGSVAFDESLVANARRADLVINRGANATFEIDSDTGEDVEIEWTCVGASDTERNINECPEETSHVRITRSATGDDFLLECYGDTDGSSSRRARR*
Ga0137427_104415491	3300011445	Soil	RALSVTDSAVGLAWMLLLEYTRFKTRKNLLKERDMLKRPQGWLYLTAFTVLAAGCAGTTTTADDRAARLPTGITLLESDRNECEGSVAFDESLVANARRADLVINRGANATFEIDSDTGEDVEIEWTCVGASDTERNINECPEETSHVRITRSATGDDFLLECYGDTDGSSSRRARR*
Ga0137319_11086341	3300012167	Soil	MFCLTAFVALGAGCATTATDDNDGRSVRLPTGVTLLDSDRDECAGSVAIDEGIIQNAARSDLVIQHGQNATFAVDAADDDDIEIEWTCVGTAAAERESTECPDETSHVRITRESTSGSFLLECYGDTDGSSSRRARR*
Ga0150985_1211082832	3300012212	Avena Fatua Rhizosphere	MHIRSQGWLYMAACAVLAAGCASTSDKDTQDARSVRLPTGVTLLDSNREDCAGSVAIDDSVIASARREDLVIARGQNATFELNTKGNDDVEIDWTCVGSSKTAREKIECPEDTSWVRITRAAGDDFLLECYGQGSTARRARR*
Ga0164241_108971121	3300012943	Soil	AIAVLGAGCATTTTSDEDARTARLPTGITLLDSDRSECEGAVAFDERAVEGSRRADLVIQRGQNAVFELDTDSDDDVEIDWTCVGSADTERNTLECPDDTSYVRVTRASTGDEFLLECYGDRDGSERRARR*
Ga0075327_10288732	3300014272	Natural And Restored Wetlands	WLYLTTCALLGAGCALTTTSDDGTARLPTGVTLLESDRNECEGAVAIDDGIVENARRADLVVQRGGNATFEIDTDNDDVDIEWTCVGASDTERNSVECPEETSYVRVTRASTGDEFVLECYGDAGSRRARG*
Ga0157380_103133811	3300014326	Switchgrass Rhizosphere	TRPQGWLYMAAFAVLAAGCATTSENEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDVVIARGQNVTFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR*
Ga0132258_123638112	3300015371	Arabidopsis Rhizosphere	MQIRPQGWLYMAACAVLAAGCAVTSDKDTQDARSARLPTGVTLLDSNREDCAGSVAIDDSVIASARREDLVIARGQSATFELDTKADDDVQIDWTCVGSSKTAREKIECPEDTSWVRITRAAGDDFLLECYGQGS
Ga0132258_128075882	3300015371	Arabidopsis Rhizosphere	LAACAALAAGCASTSDKDAPDARSARLPTGVTLLDSNREDCAGSVAIDDSVIASARREDLVIQRGQSATVELDAKADDDVEIDWTCVGTAKTEREKIECPEDTSWVRVTRAAGDDFLLECYGQGSTTRRARR*
Ga0190265_102588862	3300018422	Soil	MQKRPQGWLYLIAFGVLSAGCAATTTTGDDRTARLPTGVTLLESDRAECDGSVAIDESLIASARRADLVIQRGANATFEIDADNDEDVEIEWTCVGASDTERNTSECPEETSHVRVTRASSGDEFLLECYGDSDGSSSRRARR
Ga0190265_104940472	3300018422	Soil	MQMRPQSWIYVTAFAVLGAGCVTTATNEDARSARLPTGVTLLDSDRNECAGSVSIDERSIASARRSDLVIQRGQNATFTIDADDQDDVEIDWTCVGSTNADSETAECPDDTSHVRITRESTGNDFLLECYGERDRR
Ga0190265_106688082	3300018422	Soil	MQMRPQSLVFLAAFVVFGTGCATVSTTNDDARTARLPTGVTLLESNRERCAGSVAIDETSIANASRSDLVISRGQNAVFAVDEDADDDIEVDWTCVGVADADRETIECPDDTSHVRITRGSTGDEFLLECYGDRDSDSRSSRR
Ga0190272_119437321	3300018429	Soil	GCAVTTTTDEDARAARLPTGVTLLESDRNQCAGAVTIDETSLANARRADLVIQRGQNAVFEVDADANDDVEIAWTCVGDADTDRETAECPDDTSHVRITRASTGNEFLLECYGDTDRRRASR
Ga0190270_109919412	3300018469	Soil	MQIRPQSLVFMTAFAVLSAGCATTTTTDEDARAARLPTGVTLLESDRSECAGSVALDERLVSGARRADLVIQPGQNAVFEVDADDENDLDIDWTCVGTSDTDEETVECPDETSHVRVTRASTGNEFLFECYGDRD
Ga0190270_110852342	3300018469	Soil	MQIRPQGWLYLTAFAVLGAGCATTTTDDDASTVRLPTGVTLLESDRNECEGSVAIDESAVASARRSDLVVERGQNAIIEVDADVADDEDVEIEWTCVGSANTDRNAVECPEETSHVRITREATGDEFLLECYGDRDGSSTSRARR
Ga0190270_111692422	3300018469	Soil	MQTRPQSWLYLTAFAVLGAGCAATTTTDDDRTARLPTGITLLESDRNECDGSVAIDESLVASARRADLVIQRGANATFEIDADSDEDVEIEWTCVGASDTERNTAECPEETS
Ga0190274_102032372	3300018476	Soil	MQIRPQSLVFLAAFAVFSAGCATTTTTDEDAAAARLPTGVTLLESDRSECAGSVAIDERLVSGARRADLVIQPGQNAVFEIDADDDNDVDIDWTCVGTSDTDEETVECPDETSYVRVTRASTGDDFLFECYGDRD
Ga0190274_106579272	3300018476	Soil	MQMRPQGWLVLTAIAVLGAGCATSTMANDEDARTARLPTGVTLLDSDRSKCEGSVAIDDTALAGARRADLVIQRGQNAVFELDTDADDDVEIDWTCVGSADTERNTLECPDDTSYVRVTRASTGDEFLLECYGERDGSTERRARG
Ga0190271_1000118610	3300018481	Soil	MQIRPQGWLYLTAFAALGAGCATTTTTDDNRTARLPTGITLLESDRNECDGSVAIDESLVASARRADLVIQRGANATFEIDADSDEDVEIEWTCVGASDTERNTAECPEETSHVRVTRAATGDEFLLECYGDTDGSSSRRARR
Ga0190271_138476291	3300018481	Soil	MQIRPQSLVFLAAFAVLSAGCATTTTTDEDARAARLPTGVTLLESDRSECAGSVAIDERLVSGARRADLVIQPGQNAVFEVDADDENDLDIDWTCVGTSDTDEETVECPDETSHVRVTRASTGNEFLFECYGDRD
Ga0180112_12033382	3300019238	Groundwater Sediment	QGWLYLTAFTVLAAGCAGTTTTADDRAARLPTGITLLESDRNECEGSVAFDESLVANARRADLVINRGANATFEIDSDTGEDVEIEWTCVGASDTERNINECPEETSHVRITRSATGDDFLLECYGDTDGSSSRRARR
Ga0190264_112369201	3300019377	Soil	MQARPQGLVFLTAFVVLATGCATTGTNNDDAGTARLPTGVTLLESNREQCTGSVAIDDRSIARAGRSDLVIARGQNAVFEVEENDDDDVEVGWTCVGAADADRERIECPDNTSHVRITRGSTGDEFLLECYGSGRR
Ga0180113_13761941	3300020065	Groundwater Sediment	MQKRPQGWLYLTAFTVLAAGCAGTTTTADDRAARLPTGITLLESDRNECEGSVALDESLVANARRADLVINRGANATFEIDSDTGEDVEIEWTCVGASDTERNINECPEETSHVRITRSATGDDFLLECYGDTDGSSSRRARR
Ga0196977_10390072	3300020146	Soil	MQLRPQSWIYLATFAVLAAGCATTTTSDEDARSARLPTGVTLLESDRNECAGSVAIDESSIASARRADLVVQRGQNAVFEIDVDDNDDVEIDWTCVGTADTERETSECPDDTSHVRITRASTGNEFLLECYGDNDRR
Ga0207642_104086231	3300025899	Miscanthus Rhizosphere	MQTRPQGWVFMAAVAMLAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR
Ga0207660_101342762	3300025917	Corn Rhizosphere	MQIRPQGWLYMAAFAMLAAGCASISDTDDQDARSARLPTGVTLLDSSREECGGSVAIDDSVIKSSRREDLVIARGQNATFEIDADSDDDVEVQWTCVGTANTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR
Ga0207660_101973721	3300025917	Corn Rhizosphere	MQTRPQGWLYMAAFAMLAAGCASISDTDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSARREDLVIARGQNATFEIDADSDDDVEIQWTCVGTANTERETVECPDETSWVRITRATGDDFLFECYGDRDGSSTRRARR
Ga0207709_100506942	3300025935	Miscanthus Rhizosphere	MQTRPQGWIYMAAFAMFAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR
Ga0207689_102303112	3300025942	Miscanthus Rhizosphere	MQTRPQGWLYMAAFAVLAAGCATTSENEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR
Ga0207648_100880602	3300026089	Miscanthus Rhizosphere	MQTRPQGWVFMAAVAMLAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWMRISRATGDDFLFECYGDRGGSSTRRARR
Ga0209974_103954671	3300027876	Arabidopsis Thaliana Rhizosphere	MQTRPQGWLYMAAFAMFAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSSRREDLVIARGQNATFEINADDDDDVEIQWTCVGTANTERERIECPEDTSWVRVTRATGDDFLFECYGDRGGDSTRRARR
Ga0209486_108976992	3300027886	Agricultural Soil	MQLRPQGWLYLTAFAVLGTGCATTATDDNDGRSVRLPTGVTLLDSDRNECAGAVAIDESALGSTRRSDLVIERGQNATFEVDADADEDIEIEWTCVGAADTDREAVECPEETSYVRVTRGADDDFVLECYGDEDAA
Ga0268265_113417342	3300028380	Switchgrass Rhizosphere	MQTRPQGWLYMAAFAMLAAGCASISDTDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSARREDLVIARGQNATFEIDAASDDDVEIQWTCVGTANTERETVECPDETSWVRITRATGDDFLFECYGDRDGSST
Ga0247825_101887413	3300028812	Soil	MQIRPQSLVFLAAFAVFSAGCATTTTTDEDAAAARLPTGVTLLESDRSECAGSVAIDERLVSGARRADLVIQPGQNAVFEIDANDNDVDIDWTCVGTSDTDEETVECPDETSYVRVTRASTGDDFLFECYGDRD
Ga0247825_105045071	3300028812	Soil	MQTRPQGWIYMAAFAMFAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEINADSDEDVEIQWTCVGTANTERERVECPEDTSWVRVTRATGDDFLFECYGDRGGDSTRRARR
Ga0247825_111162152	3300028812	Soil	MQMRPQGWFCLAAAALFAAGCVSPQTSDEDARTARLPTGVTLLDSNRETCSGPVAIDDRVIAGAREDLVVQRGENATFDIDAQDEEDNVEIRWTCVGDVAAEREAVRCPDDTSHVRITRATGNDFLLECYGNRGSSTSRARR
Ga0307499_102260541	3300031184	Soil	MQTRPQGWLYMAAFAMLAAGCASTSDTDDQDARSARLPTGVTLLDSSREKCGGSVAIDDSAIRSARREDLVIARGQNATFEVDADSDDDVEIQWTCVGTANTERERIECPDDTSWVRISRATGDDFLFECYGDRGGSSTRRARR
Ga0307505_100459683	3300031455	Soil	MQTRPQGWLYLSAFAMLGAGCAFTTTTDEDARTARLPTGVTLLESDRHECEGAVAIDERAISNSGRADLVIQAGQNATFEVDVDSDEDVEIDWTCVGTAAAERDTIECPDETTHVRITRATTGDEFLLECYGDVDGSASRRARN
Ga0310888_102306122	3300031538	Soil	MQTRPQGWLYLTACAVLAAGCVTTSENQQDARGARLPTGVTLLDSNREECAGSVAIDDSVIASARREDLVIQRGQNATFELDTRADDDVVVDWACVGTANTQRERIECPEDTSWVRITRATGDDFLFECYGDRGGSSTSRAR
Ga0310886_110942092	3300031562	Soil	SDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR
Ga0307405_109886512	3300031731	Rhizosphere	MHTRPQGLAFLAAFAVFGTGCATVSTTNDDARTARLPTGVTLLESNREQCAGSVAIDETSIANARRSDLVISRGQNAVFAVDENADDDVEVEWTCVGAADADRETIECPDDTSHVRITRGSTGDEFLLECYGDRDRDDDRRR
Ga0307473_114980471	3300031820	Hardwood Forest Soil	MQTRPQGWLYLAACAVLAAGCASTSDKDAPDARSARLPTGVTLLDSNREDCAGSVAIDDSVIASARREDLVIQRGQSATFELDTKADDDVEIDWTCVGNAKTERAKVECPDDTSWVRVTRAAGDDFLLECYGDRGSATRRARR
Ga0307410_108921781	3300031852	Rhizosphere	MQLRPQSWIYLAAFAVLAAGCATTTTTDEDARSARLPTGVTLLNSDRNECAGSVAIDESSIASARRADLVIQRGQNAVFEIDADDNDDVEIDWTCVGTADTDRETSECPEDTSHV
Ga0307407_111929071	3300031903	Rhizosphere	MQLRPQSWIYLAAFAVLAAGCATTTTTDEDARSARLPTGVTLLNSDRNECAGSVAIDESSIASARRADLVIQRGQNAVFEIDADDNDDVEIDWTCVGTADTDRETSECPEDTSHVRITRATTGNEFLLECYGDRDRR
Ga0310900_115096091	3300031908	Soil	MQTRPQGWLYMAAFAMFAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEINADSDEDVEIQWTCVGTANTERERVECPEDTSWVR
Ga0307412_113912762	3300031911	Rhizosphere	MQTRPQGLVFLAAFAAFGTGCATVSTTNDDAQTARLPTGVTLLESNRERCAGSVAIDETSIVNARRSDLVISRGQNAVFAVDENADDDVEVEWTCGGAAAPDRETGECPDDTSHRRLTRG
Ga0310891_102814701	3300031913	Soil	MQTRPQGWLYMAAFAVLAAGCATTSENEQYARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEINADSDEDVEIQWTCVGTANTERERVECPEDTSWVRVTRATGDDFLFECYGDRGGDSTRRARR
Ga0307409_1023058631	3300031995	Rhizosphere	MQLRPQRWIYLAAFAVLAAGCATTTTTDEDARSARLPTGVTLLNSDRNECAGSVAIDESSIASARRADLVIQRGQNAVFEIDADDNDDVEIDWTCVGTAETDRETSECPEDTSHVRITRASTGNEFLLECYGDRDRDRR
Ga0307416_1004565221	3300032002	Rhizosphere	SWIYLAAFAVLAAGCATTTTTDEDARSARLPTGVTLLNSDRNECAGSVAIDESSIASARRADLVIQRGQNAVFEIDADDNDDVEIDWTCVGTADTDRETSECPEDTSHVRITRATTGNEFLLECYGDRDRR
Ga0310897_104764982	3300032003	Soil	MQTRPQGWVYMAAVAMLAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWMR
Ga0307414_110080692	3300032004	Rhizosphere	MQLRPQRWIYLAAFAVLAAGCATTTTTDEDARSARLPTGVTLLDSDRNECAGSVAIDESSIASARRADLVIQRGQNAVFEIDADDNDDVEIDWTCVGTADTDRETSECPEDTSHVRITRATTGNEFLLECYGDRDRR
Ga0307411_102862262	3300032005	Rhizosphere	MQLRPQSWIYLAAFAVLAAGCATTTTTDEDARSARLPTGVTLLNSDRNECAGSVAIDESSIASARRADLVIQRGQNAVFEIDADDNDDVEIDWTCVGTADTDRETSECPEDTSHVRITRASTGNEFLLECYGDRDRDRR
Ga0310899_105587171	3300032017	Soil	GWVFMAAVAMLAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGSSTRRARR
Ga0310890_106046492	3300032075	Soil	MQTRPQGWLYMTAFAMLAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSVIKSSRREDLVIARGQNATFEINADSDEDVEIQWTCVGTANTERERVECPEDTSWVRVTRATGDDFLFECYGDRGGDSTRRARR
Ga0315910_100405073	3300032144	Soil	MQARLQGLFCLTAFAALSAGCATTGIDDNDGRSARLPTGVTLLDSDRDQCAGSVAIDESGIANAARSDLVIQQGQNATFQVDGDADEDIEIEWTCVGTASTDRNSVVCPDETSYVRITRGTGDDFLLECYGDRGGSSAGSTRR
Ga0315910_100637802	3300032144	Soil	MQTRPQGWLLITGLAVLGTGCAFTTTTDEDAAAARLPTGVTLLESDRNECEGAVAIDETAIASSRREDLVIQRGQNATFEVDFDDDEDVEIDWTCVGVADAERDTVECPDETTHVRITRATTGDEFLLECYGDVDGSSSRRARN
Ga0315910_101002203	3300032144	Soil	MRMRPQGWFYLAAFAALSAGCASTTETDEDARSARLPTGVTLLESDRNECEGAVSVDEGVVSNARRADLVIQRGQNATFEVDGDANEDIDIEWTCVGAANADRETVECPEDTTHVRITRASTGDEFLLECY
Ga0315910_101261792	3300032144	Soil	MQKRPQGWLYLTACAVLSAGCALSTTTDDDRTARLPTGITLLESDRAECDGSVTLDESVVANARRADLVIRPGSNATFEIDADNDEDVEIEWTCVGDRNTERNTSECPEDTSHVRVTRASTGDELVLECYGDNDGSSSRRARR
Ga0315910_101671282	3300032144	Soil	MQLRRQYWLYLTAFGVLAAGCATTTTADRDARAARLPTGVTLLDSDRNECEGAVAIDERSISNARRSDLVIQPGQNATFEVDVDADDDVEIDWTCVGAANADQETADCPDQTSHVRITRASTGDEFLLECYGDRD
Ga0315910_105617232	3300032144	Soil	MQTRPQGWLCLTVFALLGAGCAATTTTDEDARSARLPTGVTLLDSDRNECEGSVAIDERSVASARRSDLVIQRGQNAVIEVEADDNDDVELDWTCVGAADTERNTLSCPDETSHVRVTRASTGDEFLLECYGDRDGSTRRARR
Ga0315910_113051381	3300032144	Soil	MHMRPQSWIYIAAFAVLGTGCATTTASNEDARAARLPTGVTLLESDRNECEGAVAIDESALANARRSDLVIQAGENATFEVEADDDNDVEIEWTCVGAANADRESVECPDRTSYVRITRASTGDEFLLECYGDNDRR
Ga0315912_100519962	3300032157	Soil	MQMRPQGWFCLAAAALFAAGCVSPQTSDEDARTARLPTGVTLLDSNRETCSGPVAIDDRVIAGAREDLVVQRGENATFDIDAQDESDNVEIRWTCVGDVAAEREAVRCPDDTSHVRITRATGNDFLLECYGNRGSSTSRARR
Ga0315912_101552082	3300032157	Soil	MRMRPQGWFYLAAFAALSAGCASTTETDEDARSARLPTGVTLLESDRNECEGAVSVDEGVVSNARRADLVIQRGQNATFEVDGDANEDIDIEWTCVGAANADRETVECPEDTTHVRITRASTGDEFLLECYGDRDGSSSRRARR
Ga0315912_103249792	3300032157	Soil	MQTRPQGWLCLTVFALLGAGCAATTTTDEDARSARLPTGVTLLDSDRNECEGSVAIDERSVASARRSDLVIQRGQNAVIEVEADDNDDVELDWTCVGAADTERNTLSCPDETSHVRVTRASTGDEFLLECYGDR
Ga0315912_106882812	3300032157	Soil	MQARLQGLLCLTAFAALGAGCVTTGTDDNDGRSARLPTGITLLDSDRDQCAGSVAIDESAIANAARSDLVIQQGQNATFQVDGEDDEDVEIEWTCVGTASTDRDSVVCPDETSYVRITRGNGDDFLLECYGDRGGSSAGNRR
Ga0310889_105578151	3300032179	Soil	MQTRPQGWVFMAAVAMLAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEVDADSDDDVAIEWTCVGSAKTERERIECPEDTSWVRISRATGDDFLFECYGDRGGDSTRRARR
Ga0307471_1020936731	3300032180	Hardwood Forest Soil	MQTRPQGWLYMAAFAMLAAGCAYTSDTDREDSRSVRLPTGVTLLDSNREECAGSVAIDDSVIASARREDLVIQRGQNATFKLDTTADDDVEIDWTCVGTASTERETIECPDDTSWVRITRAEGNDFLLECYGDRGSATSRARR
Ga0314792_174632_1_345	3300034667	Soil	MAAFAMFAAGCASISDNDEQDARSARLPTGVTLLDSNREECGGSVAIDDSAIKSSRREDLVIARGQNATFEINADSDEDVEIQWTCVGTANTERERVECPEDTSWVRVTRATGDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079751

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences