Metagenome Family F079796

Basic Information
Family ID	F079796
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	43 residues
Representative Sequence	ADFDRTAGHLAATLDSLGVPGHLADQIVGIVAGLRPAVVTA
Number of Associated Samples	91
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.88 %
% of genes near scaffold ends (potentially truncated)	98.26 %
% of genes from short scaffolds (< 2000 bps)	92.17 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Bacteria (69.565 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.087 % of family members)
Environment Ontology (ENVO)	Unclassified (61.739 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (48.696 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.28% β-sheet: 0.00% Coil/Unstructured: 50.72%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13191	AAA_16	57.39
PF13401	AAA_22	9.57
PF04675	DNA_ligase_A_N	3.48
PF00196	GerE	1.74
PF08327	AHSA1	1.74
PF01161	PBP	0.87
PF07721	TPR_4	0.87
PF01152	Bac_globin	0.87
PF00561	Abhydrolase_1	0.87
PF00271	Helicase_C	0.87
PF12840	HTH_20	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.48
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.87
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.57 %
Unclassified	root	N/A	30.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.57 %
Unclassified	root	N/A	30.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.57 %
Unclassified	root	N/A	30.43 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.35 %
Unclassified	root	N/A	30.43 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	64.35 %
Unclassified	root	N/A	30.43 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	53.04 %
Unclassified	root	N/A	30.43 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	3.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	21.74 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	11.30 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	3.48 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.87 %
Motilibacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	11.30 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	7.83 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.61 %
Motilibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae	0.87 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.87 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	10.43 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	7.83 %
Microtetraspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora	2.61 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.87 %
Motilibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter	0.87 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
Actinoplanes globisporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	10.43 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	5.22 %
Microtetraspora fusca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → Microtetraspora fusca	2.61 %
Actinomadura rubrisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rubrisoli	2.61 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.87 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.87 %
Motilibacter peucedani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter peucedani	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
Actinoplanes globisporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	10.43 %
Actinomadura sp. K4S16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. K4S16	5.22 %
Microtetraspora fusca	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → Microtetraspora fusca	2.61 %
Actinomadura rubrisoli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rubrisoli	2.61 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.87 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.87 %
Motilibacter peucedani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter peucedani	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10396526	Not Available	777	Open in IMG/M
3300005332\|Ga0066388_103455942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	806	Open in IMG/M
3300005437\|Ga0070710_11279888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300005445\|Ga0070708_101876135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300005467\|Ga0070706_101361268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650	Open in IMG/M
3300005538\|Ga0070731_10306432	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300005552\|Ga0066701_10967785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	503	Open in IMG/M
3300005559\|Ga0066700_10770536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300006047\|Ga0075024_100438519	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300006050\|Ga0075028_100638105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	636	Open in IMG/M
3300006804\|Ga0079221_10128905	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300006804\|Ga0079221_10736577	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300007255\|Ga0099791_10068440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → Microtetraspora fusca	1607	Open in IMG/M
3300009162\|Ga0075423_13033931	Not Available	514	Open in IMG/M
3300009792\|Ga0126374_10111391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1578	Open in IMG/M
3300010043\|Ga0126380_10485453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	944	Open in IMG/M
3300010047\|Ga0126382_10244731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1310	Open in IMG/M
3300010048\|Ga0126373_11249194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	809	Open in IMG/M
3300010048\|Ga0126373_11333206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	783	Open in IMG/M
3300010048\|Ga0126373_11485525	Not Available	743	Open in IMG/M
3300010360\|Ga0126372_12072769	Not Available	616	Open in IMG/M
3300010361\|Ga0126378_11766804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300010366\|Ga0126379_10530392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1254	Open in IMG/M
3300010376\|Ga0126381_104316745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	550	Open in IMG/M
3300012199\|Ga0137383_11319809	Not Available	514	Open in IMG/M
3300012210\|Ga0137378_10709030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	917	Open in IMG/M
3300012210\|Ga0137378_11380720	Not Available	618	Open in IMG/M
3300012354\|Ga0137366_10177467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1598	Open in IMG/M
3300012363\|Ga0137390_10470910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. K4S16	1231	Open in IMG/M
3300012930\|Ga0137407_10048132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	3445	Open in IMG/M
3300012948\|Ga0126375_11276856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300012971\|Ga0126369_12645908	Not Available	586	Open in IMG/M
3300016270\|Ga0182036_10931815	Not Available	713	Open in IMG/M
3300016319\|Ga0182033_10712317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. K4S16	879	Open in IMG/M
3300016404\|Ga0182037_10349302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1204	Open in IMG/M
3300016404\|Ga0182037_11576701	Not Available	584	Open in IMG/M
3300016404\|Ga0182037_11890055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	534	Open in IMG/M
3300016422\|Ga0182039_11015679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	744	Open in IMG/M
3300016445\|Ga0182038_10525059	Not Available	1013	Open in IMG/M
3300018064\|Ga0187773_11253946	Not Available	501	Open in IMG/M
3300021086\|Ga0179596_10611795	Not Available	553	Open in IMG/M
3300021560\|Ga0126371_13310445	Not Available	545	Open in IMG/M
3300025898\|Ga0207692_10707988	Not Available	654	Open in IMG/M
3300025922\|Ga0207646_11022224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	730	Open in IMG/M
3300026557\|Ga0179587_10411908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. K4S16	882	Open in IMG/M
3300027869\|Ga0209579_10023475	All Organisms → cellular organisms → Bacteria	3438	Open in IMG/M
3300027882\|Ga0209590_10575238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	725	Open in IMG/M
3300031543\|Ga0318516_10076468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1863	Open in IMG/M
3300031543\|Ga0318516_10840026	Not Available	518	Open in IMG/M
3300031549\|Ga0318571_10054664	Not Available	1200	Open in IMG/M
3300031561\|Ga0318528_10365447	Not Available	775	Open in IMG/M
3300031561\|Ga0318528_10493376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. K4S16	658	Open in IMG/M
3300031564\|Ga0318573_10053164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1983	Open in IMG/M
3300031564\|Ga0318573_10094589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1527	Open in IMG/M
3300031572\|Ga0318515_10071777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1779	Open in IMG/M
3300031572\|Ga0318515_10114430	Not Available	1422	Open in IMG/M
3300031572\|Ga0318515_10233643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Motilibacterales → Motilibacteraceae → Motilibacter → Motilibacter peucedani	986	Open in IMG/M
3300031572\|Ga0318515_10709366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rubrisoli	532	Open in IMG/M
3300031640\|Ga0318555_10198404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1081	Open in IMG/M
3300031680\|Ga0318574_10415857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	786	Open in IMG/M
3300031719\|Ga0306917_10484613	Not Available	970	Open in IMG/M
3300031720\|Ga0307469_10856666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	838	Open in IMG/M
3300031723\|Ga0318493_10048757	Not Available	1996	Open in IMG/M
3300031744\|Ga0306918_10564117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. K4S16	892	Open in IMG/M
3300031751\|Ga0318494_10321058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	894	Open in IMG/M
3300031754\|Ga0307475_10752562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	775	Open in IMG/M
3300031771\|Ga0318546_10119312	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300031771\|Ga0318546_11343833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	502	Open in IMG/M
3300031777\|Ga0318543_10415793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	603	Open in IMG/M
3300031781\|Ga0318547_10144174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1396	Open in IMG/M
3300031792\|Ga0318529_10132848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1138	Open in IMG/M
3300031793\|Ga0318548_10287753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	807	Open in IMG/M
3300031795\|Ga0318557_10054872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1685	Open in IMG/M
3300031799\|Ga0318565_10244492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	872	Open in IMG/M
3300031799\|Ga0318565_10390555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	675	Open in IMG/M
3300031805\|Ga0318497_10658800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	587	Open in IMG/M
3300031820\|Ga0307473_10293278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1020	Open in IMG/M
3300031821\|Ga0318567_10367247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. K4S16	814	Open in IMG/M
3300031831\|Ga0318564_10123872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → Microtetraspora fusca	1151	Open in IMG/M
3300031832\|Ga0318499_10013440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2724	Open in IMG/M
3300031846\|Ga0318512_10198996	Not Available	979	Open in IMG/M
3300031846\|Ga0318512_10306092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	790	Open in IMG/M
3300031890\|Ga0306925_11657827	Not Available	619	Open in IMG/M
3300031893\|Ga0318536_10011641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3797	Open in IMG/M
3300031894\|Ga0318522_10094818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1101	Open in IMG/M
3300031896\|Ga0318551_10121510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1407	Open in IMG/M
3300031896\|Ga0318551_10532173	Not Available	675	Open in IMG/M
3300031897\|Ga0318520_10507216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rubrisoli	745	Open in IMG/M
3300031897\|Ga0318520_10609295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	679	Open in IMG/M
3300031910\|Ga0306923_10128454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2882	Open in IMG/M
3300031910\|Ga0306923_11365269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microtetraspora → Microtetraspora fusca	748	Open in IMG/M
3300031912\|Ga0306921_12416531	Not Available	548	Open in IMG/M
3300031941\|Ga0310912_11330942	Not Available	544	Open in IMG/M
3300031942\|Ga0310916_10433592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1119	Open in IMG/M
3300031947\|Ga0310909_10244063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1500	Open in IMG/M
3300031954\|Ga0306926_10929399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1040	Open in IMG/M
3300031959\|Ga0318530_10020934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2249	Open in IMG/M
3300032008\|Ga0318562_10042179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2478	Open in IMG/M
3300032008\|Ga0318562_10045125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2403	Open in IMG/M
3300032009\|Ga0318563_10767525	Not Available	517	Open in IMG/M
3300032025\|Ga0318507_10058245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1537	Open in IMG/M
3300032041\|Ga0318549_10196605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	905	Open in IMG/M
3300032041\|Ga0318549_10546617	Not Available	520	Open in IMG/M
3300032044\|Ga0318558_10399059	Not Available	684	Open in IMG/M
3300032054\|Ga0318570_10172750	Not Available	971	Open in IMG/M
3300032055\|Ga0318575_10583589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	567	Open in IMG/M
3300032065\|Ga0318513_10051501	Not Available	1845	Open in IMG/M
3300032065\|Ga0318513_10401389	Not Available	669	Open in IMG/M
3300032067\|Ga0318524_10100790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1431	Open in IMG/M
3300032076\|Ga0306924_11682360	Not Available	666	Open in IMG/M
3300032076\|Ga0306924_12613037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rubrisoli	504	Open in IMG/M
3300032089\|Ga0318525_10731134	Not Available	503	Open in IMG/M
3300032261\|Ga0306920_103214461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300032261\|Ga0306920_103394471	Not Available	591	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.13%
Host-Associated	Host-Associated	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.39%
Aquatic	Environmental → Aquatic	1.74%
Plants	Host-Associated → Plants	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.39%
Sediment	Environmental → Aquatic → Sediment	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.43%
Loam	Environmental → Terrestrial → Soil → Loam	6.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079796

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_103965262	3300004633	Tropical Forest Soil	VDFDRTAVFLAETLESLGVPGHLADYIVGVVAGLRPALVTA*
Ga0066388_1034559421	3300005332	Tropical Forest Soil	GLGITDADFDRTAGLLAATLGSLGVPGHLADQIVGIVAGLRPALVTA*
Ga0070710_112798881	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LGITDADFDRTAGHLAATLDSLAVPGHLTDQIVAIVAGLRPAVVTA*
Ga0070708_1018761352	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DAHRGLGISDIQFDLVAAHLGAILDELGVPSHLAGRIVGIVAGLRPAIVTA*
Ga0070706_1013612681	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RISNAHFDQTAAHLDAVLDGLGVRRELTDQIVGIVASLRPHIVTA*
Ga0070731_103064322	3300005538	Surface Soil	TDAHFNLAAGHLDATLDGLGVPRHLTDQIIGIVATLQPAVVTA*
Ga0066701_109677852	3300005552	Soil	GPGLAGAHCRLGISDIHFDLVAAHLGATLDELGVPSHLAGRIGQIVAGLRPAIVTA*
Ga0066700_107705362	3300005559	Soil	FDQTAAHLDAVLDGLGVPRDLTNQIIGIVASLRPHIVTA*
Ga0075024_1004385191	3300006047	Watersheds	RYRGPGIADAHRGLSISAAHFDRAAGYLGATLDKLGVPPHLADQIVGIVAGLRPAVVTGQGDRAP*
Ga0075028_1006381051	3300006050	Watersheds	AHHGLGITGAHFDLAAAHLYATLDGLGVPRHLSDHIVGIVGGLRPAVVTA*
Ga0079221_101289052	3300006804	Agricultural Soil	GHLAATLDSLGVPGHLAGQIVGIVAGLRPAVVTA*
Ga0079221_107365771	3300006804	Agricultural Soil	HRGLGITDADFDRTAVHLADTLDSLGVPGHLGDHIVGIVAGLRPALVTG*
Ga0099791_100684401	3300007255	Vadose Zone Soil	SNAHFDQTAAHLDAVLDGLGVPRELTDQIIGIVASLRPHLVTA*
Ga0075423_130339311	3300009162	Populus Rhizosphere	DADFDRTAVHLADTLDSLGVPGHLADHIVGIVAGLRPALVTG*
Ga0126374_101113911	3300009792	Tropical Forest Soil	RGLGISDAHFDRAAACLSASLDELGVPRNLADRIVAIVAGLRQAVVTG*
Ga0126380_104854532	3300010043	Tropical Forest Soil	RAAACLSASLDELGVPRNLADRIVAIVAGLRQAVVTG*
Ga0126382_102447312	3300010047	Tropical Forest Soil	ISDAHFDRTAAHLAGALDELGVPCHLADQIIGIVAGLRPIIVTAGA*
Ga0126373_112491941	3300010048	Tropical Forest Soil	HFERTAAHLAATLDELGVPAGLAGQIVAAVAGLRPAIVTG*
Ga0126373_113332061	3300010048	Tropical Forest Soil	ITGAHFDRTAAHLAATLDELGVPAGLAGQVVSAVAGLRPAIVTA*
Ga0126373_114855252	3300010048	Tropical Forest Soil	GAHRGLGISDAHGDRAAAHLGATLDELGIPRDLTDRIGAILAGLRRAVVGVG*
Ga0126372_120727691	3300010360	Tropical Forest Soil	DRAAGHLSDTLDELAVPRPLADQVIAIVAGLRPVIVTG*
Ga0126378_117668043	3300010361	Tropical Forest Soil	GLGISGAHFERAAAHLDATLNELGVPRHLTDHIVGIVAGLRHAVVTV*
Ga0126378_134206632	3300010361	Tropical Forest Soil	HLGVTDAQFDRAAGCLDATLTSLGVPRHLSDRVIGIVAGLRPVIVTA*
Ga0126379_105303922	3300010366	Tropical Forest Soil	LGITDADFDRTAGHLAATLDSLSVPGHLADQIVGIVAGLRPAVVTA*
Ga0126381_1043167451	3300010376	Tropical Forest Soil	FNQTAGHLSDALDELAVPRPLADQVIGIVAGLRPVVVTA*
Ga0137383_113198092	3300012199	Vadose Zone Soil	TDADFDRTAGHLAATLGSLCVPGHLAGQIVGLVVGLRSAVVTA*
Ga0137378_107090302	3300012210	Vadose Zone Soil	RTAAHLHATLEELGVPGELASRIVAIVAGLRPAVVTA*
Ga0137378_113807201	3300012210	Vadose Zone Soil	GHLAATLDSLGVPGHLVDHIVGIVAGLRPAVVTA*
Ga0137366_101774671	3300012354	Vadose Zone Soil	KAHRGLGIGDADFDRTAGHLAATLDSLGVPGHLADHIVGIVAGLRPAVVTA*
Ga0137390_104709102	3300012363	Vadose Zone Soil	AAHLAATLGELGVPRHLADHIVAVVAGLRPAVVTVSV*
Ga0137407_100481323	3300012930	Vadose Zone Soil	LGISDTHFERAAAHLHATLDDLGVPRRLADHIVGIVAGLRQAIVTV*
Ga0126375_112768562	3300012948	Tropical Forest Soil	LAKAHGGLGITNADFDRTAGHLAATLDSLGVPGHPTDQIVGIVAGLRPAVVTA*
Ga0126369_126459082	3300012971	Tropical Forest Soil	ADFDRTAGHLAATLDSLGVPGHLADQIVGIVAGLRPAVVTA*
Ga0182036_109318151	3300016270	Soil	AQFDRAAVHLAGTLDELGVPRDLADRIVETVAGLRPAVVTA
Ga0182033_107123172	3300016319	Soil	INDTHFDRAAFHLRATLDGLSVPRHLADHIVGIVAGLRPAVVTA
Ga0182037_103493022	3300016404	Soil	GLSISNAHFDRAAAHLAGTLDELGVPRDLADRIVGIVAGLRPVVVTA
Ga0182037_115767012	3300016404	Soil	IGDAHFDRAAAHLAVTLSELGVSRHLADHIVATVAGLRPAVVTA
Ga0182037_118900551	3300016404	Soil	AAACLSASLDELGVPGHLADRIVGIVAGLRPAVVTA
Ga0182039_110156791	3300016422	Soil	DADFDRTAAHLAGTLDGLGVPGHLADHIVGVVAGLRPALVTA
Ga0182038_105250591	3300016445	Soil	RAAFHLRATLDGLSVPRHLADHIVGIVAGLRPAVVAA
Ga0187773_112539462	3300018064	Tropical Peatland	GVSDAHFERAAGHLAAALDELAVPRHLADRIVGIVAGLRPAVVTA
Ga0179596_106117951	3300021086	Vadose Zone Soil	ADFDRTAGHLAATLGALGVPGHLTDQIVGIVAGLRPAVVTA
Ga0126371_133104451	3300021560	Tropical Forest Soil	GGLGITNADFDRTAGHLAATLDSLGVPGHLTDQIVGIVAALRPAVVTA
Ga0207692_107079881	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	ITDADFDRTAVHLADTLGSLGVPGHLADHIVGIVAGLRPAVVTA
Ga0207646_110222242	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AAGHLYATLDGLGVPRHLSDHIVGIVAGLRPAVVTA
Ga0179587_104119082	3300026557	Vadose Zone Soil	FNLVAGHLDATLEDLDVPRDLTDQIIAIVATLRDTAVTA
Ga0209579_100234753	3300027869	Surface Soil	NLAAGHLDATLDGLGVPRHLTDQIIGIVATLQPAVVTA
Ga0209590_105752381	3300027882	Vadose Zone Soil	SDTHFDLAAAHLAATLDGLGVPRHLADQIVGIVAGLRSAIVTA
Ga0318516_100764682	3300031543	Soil	AVHLAEVLDSLGVPGHLADHIVGIVAGLRPALVTA
Ga0318516_108400261	3300031543	Soil	TAVHLAEVLDSLGVPGHLADHIVGIVAGLRPAIVTA
Ga0318571_100546641	3300031549	Soil	HRGLGINDTHFDRAAFHLRATLDGLSVPRHLADHIVGIVAGLRPAVVAA
Ga0318528_103654472	3300031561	Soil	TAVYLAEVLDSLGVPGHLADHIVGIVAGLRPAVVTA
Ga0318528_104933762	3300031561	Soil	FDRAAVHLYATLDSLSVPQHLADHIVGIVAGLRPVVVTA
Ga0318573_100531642	3300031564	Soil	VCLGISDADFDRTAVHLAATLDSLGVPGHLADHIVGIVAGLRPALVTA
Ga0318573_100945891	3300031564	Soil	TDAHFDRAAGHLSGTLDGLGVPRHLTDHIVGIVAGLRPAVVTA
Ga0318515_100717771	3300031572	Soil	GISDAHFDRAAVHLYATLDSLSVPQHLADHVVGIVAGLRPVVVTA
Ga0318515_101144301	3300031572	Soil	FDRAAFHLRATLDGLSVPRHLADHIVGIVAGLRPAVVAA
Ga0318515_102336431	3300031572	Soil	LNISDGHFDRAAAHLAGTLDELGVPRDLADRIVGIVAGLRPVVVTA
Ga0318515_107093662	3300031572	Soil	DRTAAHLDDTLGELGVPRHLADQIIAIVASLRPAVVTA
Ga0318555_101984042	3300031640	Soil	DRTAVHLAEVLDSLGVPGHLADHIVGIVAGLRPAVVTA
Ga0318574_104158571	3300031680	Soil	PDLAQAHRRLGISDADFDRTAVHLAATLDSLGVPGHLADHIVGIVAGLRPALVTA
Ga0306917_104846132	3300031719	Soil	DLAAGHLGATLDELGVPSQLADRIIVIVAGLRPAVVTV
Ga0307469_108566662	3300031720	Hardwood Forest Soil	LGITGAHFDLAAAHLYATLDGLGVPRHLSDHIVGIVGGLRPAVVTA
Ga0318493_100487572	3300031723	Soil	LSISNAHFDRAAAHLAGTLDELGVPRDLADRIVGIVAGLRPAVVTA
Ga0306918_105641171	3300031744	Soil	DLAAAHLYATLDGLGVPRHLSDHIVGIVAGLRPAVVTA
Ga0318494_103210581	3300031751	Soil	FDRAAAHLAGTLDELGVPRDLADRIVGTVAGLRPAVVTA
Ga0307475_107525621	3300031754	Hardwood Forest Soil	AAHHGLGITGAHFDLAAAHLYATLDGLGIPRHLSDHIVGIVGSLRPAVVTA
Ga0318546_101193124	3300031771	Soil	DRTAGHLDATLDELGVPRHLADQIIAIVASLRPAIVTG
Ga0318546_113438331	3300031771	Soil	DAHFDRAAGHLGATLDELGVPGHLADGIIMIVAGLRPAVVTV
Ga0318543_104157931	3300031777	Soil	AVTSAHRGLGIGDTHFDRAATHLAATLGELGVPRHLADHIVGIVAGLRPAVVAA
Ga0318547_101441742	3300031781	Soil	HFDRAAAHLAVTLSELGVSPHLADHIVATVAGLRPAVVTA
Ga0318529_101328481	3300031792	Soil	AQAHRRLGISDADFDRTAVHLAATLDSLGVPGHLADHIVGIVAGLRPALVTA
Ga0318548_102877532	3300031793	Soil	NAQFVQGAAHLAGTLDELGVPRDLADRIVETVAGLRPAVVTA
Ga0318557_100548721	3300031795	Soil	VQGAAHLAGTLDELGVPRDLADRIVGIVAGLRPVVVTA
Ga0318565_102444922	3300031799	Soil	RGLGISGAHFDRAAAHLAGTLDELGVPRDLADRIVETVAGLRPAVVTA
Ga0318565_103905552	3300031799	Soil	HFDRAAGHLGATLDELGVPGHLADRIIMIVAGLRPAVVTV
Ga0318497_106588002	3300031805	Soil	RAAGHLSGTLDELAVPRPLADQIIGIVAGLRPVIVIV
Ga0307473_102932781	3300031820	Hardwood Forest Soil	ITGTHFDLAATHLYATLDGLGVPRHLSDHIVGIVAGLRSAVVTA
Ga0318567_103672472	3300031821	Soil	AVHLVATFDALSVPRHLADPIVGIVAGLRPAVVTG
Ga0318564_101238722	3300031831	Soil	AAVHLVATLDALSVPRHLADPIVGIVAGLRPAVVTA
Ga0318499_100134401	3300031832	Soil	PSPPWAAAHLYATLDGLGVPRHLSDHIVGIVAGLRPAVVTA
Ga0318512_101989962	3300031846	Soil	GDAHFDLAAGHLGATLDELGVPSQLADRIIVIVAGLRPAVVTV
Ga0318512_103060921	3300031846	Soil	GAAHLAGTLDELGVPRDLADRIVGIVAGLRPVVVTA
Ga0306925_116578271	3300031890	Soil	ADFDRTAVLLAETLDSLGVPGHLADYIVGIVAGLRPAVVTA
Ga0318536_100116411	3300031893	Soil	AAGHLGATLDELGVPSQLADRIIVIVAGLRPAVVTV
Ga0318522_100948181	3300031894	Soil	LGITDAHFDRAAGHLSGTLDGLGVPRHLTDHIVGIVAGLRPAVVTA
Ga0318551_101215102	3300031896	Soil	SNDHFDRAGAHLAATLDELGVPGPLADHVVGIVVGLRGSVVSV
Ga0318551_105321732	3300031896	Soil	LGITDADFDQTAVHLAEVLDSLGVPGHLADHIVGIVAGLRPAVVTA
Ga0318520_105072162	3300031897	Soil	GITNAQFDRTAGHLDATLDELGVPRHLADQIIAIVASLRPAIVTG
Ga0318520_106092951	3300031897	Soil	DRAAVHLAGTLDELGVPRDLADRIVGIVAGLRPAVVTV
Ga0306923_101284541	3300031910	Soil	FDRTAVHLAATLDSLGVPGHLADHIVGIVAGLRPALVTA
Ga0306923_113652691	3300031910	Soil	RAAGHLSGTLDGLGVPRHLTDHIVGIVAGLRPAVVTA
Ga0306921_124165311	3300031912	Soil	AAAHLAATLDELGVPGHLADQIVAVVAGLRPAVVTA
Ga0310912_113309422	3300031941	Soil	RGLSISGAHFDRAAAHLDATLDGLGVPRHLTDRIVGIVAGLRPAVVTV
Ga0310916_104335922	3300031942	Soil	FDRAAAHLAGTLDELGVPRDLADRIVGIVAGLRPAVVTA
Ga0310909_102440631	3300031947	Soil	LGISDAHFDRAAACLSATLDELGVPGHLADRIVGIVAGLRQAVVTG
Ga0306926_109293991	3300031954	Soil	ISDAHFDRAAACLSATLDELGVPGHLADRIVGIVAGLRQAVVTG
Ga0318530_100209342	3300031959	Soil	AGHLGATLDELGVPRHLANRIIATVAGLRPAVVTV
Ga0318562_100421791	3300032008	Soil	THFDLAAAHLYATLDGLGVPRHLSDHIVGIVAGLRPAVVTA
Ga0318562_100451252	3300032008	Soil	AAHRGLGISGAHFDRAAAHLAGTLDELGVPRDLADRIVETVAGLRPAVVTA
Ga0318563_107675251	3300032009	Soil	RGLGIGDTHFDRAAAHLAVTLSELGVSRHLADHIVATVAGLRPAVVTA
Ga0318507_100582451	3300032025	Soil	AFHLTATLDGLGVPRHLADHIVGIVAGLRPAVVTA
Ga0318549_101966051	3300032041	Soil	RGLGISDAHFDRAAACLSATLDELGVPGHLADRIVGIVAGLRQAVVTG
Ga0318549_105466171	3300032041	Soil	RAAAHLAGTLDELGVTRDLADRIVGIVAGLRPVVVTA
Ga0318558_103990592	3300032044	Soil	VTGNAKLVQGAAHLAGTLDELGVPRDLADRIVGIVAGLRPVVVTA
Ga0318570_101727501	3300032054	Soil	FDLAAGHLGATLDELGVPSQLADRIIVIVAGLRPAVVTV
Ga0318575_105835891	3300032055	Soil	DFDRTAVYLAEVLDSLGVPGHLADHIVGIVAGLRPAVVTA
Ga0318513_100515011	3300032065	Soil	HFDRAAAHLDATLDGLGVPRHLTDRIVGIVAGLRPAVVTV
Ga0318513_104013891	3300032065	Soil	PDLAKAHRSLGISDADFDQTAVHLAETLGSLGVPGHLADHIVGIVAGLRPALVMA
Ga0318524_101007901	3300032067	Soil	ITDADFDQTAVHLAEVLDSLGVPGHLADHIVGIVAGLRPAVVTA
Ga0306924_116823602	3300032076	Soil	DFDRTAGHLAATLDSLGVPGHLADQIVGIVAGLRPAVVTA
Ga0306924_126130372	3300032076	Soil	DRTAAHLDDTLTELGVPRHLADQIIAIVASLRPAVVTA
Ga0318525_107311341	3300032089	Soil	GLGIGDTHFDRAAAHLAAALSELGVPRHLADHIVATVAGLRPAVVTA
Ga0306920_1032144612	3300032261	Soil	HFDLAAAHLYATLDGLGVPRELSDQIVGIVAGLRPAVVTA
Ga0306920_1033944712	3300032261	Soil	RAAACLSATLDELGVPGHLADRIVGIVAGLRQAVVTG

Hidden Markov Model


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