Metagenome Family F079808

Basic Information
Family ID	F079808
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	59 residues
Representative Sequence	MKIKDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Number of Associated Samples	83
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	80.00 %
% of genes near scaffold ends (potentially truncated)	29.57 %
% of genes from short scaffolds (< 2000 bps)	79.13 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (85.217 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (51.304 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (63.478 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1RCM40_10442312 2RCM30_10186493 3RCM26_10430493 4JGI25908J49247_100045251 5JGI25908J49247_101040453 6JGI25909J50240_100100111 7JGI25907J50239_10069752 8JGI25907J50239_10442202 9Ga0049081_100776645 10Ga0049081_101392523 11Ga0049081_101503174 12Ga0049081_101716563 13Ga0049081_103098432 14Ga0075470_101628503 15Ga0070749_103552711 16Ga0070749_106846791 17Ga0070749_107503152 18Ga0070748_11488873 19Ga0075458_100828723 20Ga0102859_11053952 21Ga0114841_11807062 22Ga0114337_10804596 23Ga0114876_10196244 24Ga0114876_11593442 25Ga0114876_12292951 26Ga0102829_11937411 27Ga0114968_100319596 28Ga0114968_105421742 29Ga0114970_100168053 30Ga0114975_106636401 31Ga0115547_11585311 32Ga0137675_10063663 33Ga0157203_10571282 34Ga0157498_10803511 35Ga0164293_103360991 36Ga0177922_112272651 37Ga0181350_10451221 38Ga0181350_11221992 39Ga0181347_11417371 40Ga0181347_11555523 41Ga0181365_10942551 42Ga0181344_10397951 43Ga0181356_11749273 44Ga0181356_12127191 45Ga0181357_12546741 46Ga0181349_12376262 47Ga0181346_12094594 48Ga0181348_12144482 49Ga0181563_100531575 50Ga0181359_11258853 51Ga0181359_11819612 52Ga0181359_12298063 53Ga0211734_112169092 54Ga0211729_114071131 55Ga0211731_111800023 56Ga0207942_10141623 57Ga0213920_100220111 58Ga0213920_10093139 59Ga0213920_10248156 60Ga0213921_10129136 61Ga0213921_10191013 62Ga0213922_100169917 63Ga0213922_10661582 64Ga0222714_100867768 65Ga0222714_106297732 66Ga0222712_107904391 67Ga0222712_108182392 68Ga0181353_10026861 69Ga0214921_1000561924 70Ga0214919_1000189134 71Ga0255147_100016915 72Ga0208147_10863522 73Ga0208916_103858562 74Ga0208916_104921392 75Ga0255105_10870072 76Ga0255113_10137942 77Ga0208554_10431001 78Ga0208974_10280964 79Ga0208974_10711262 80Ga0208975_11812342 81Ga0209599_100286517 82Ga0209297_100076921 83Ga0209087_100822013 84Ga0209087_10312513 85Ga0209596_10586007 86Ga0209296_100225310 87Ga0209296_10805602 88Ga0209088_104016682 89Ga0209086_1000587211 90Ga0209354_104344342 91Ga0209990_103958442 92Ga0209253_102473553 93Ga0209191_10034173 94Ga0247723_10049449 95Ga0247723_100734412 96Ga0247723_10838334 97Ga0247722_100182644 98Ga0135227_10496432 99Ga0315291_107922384 100Ga0315291_109063893 101Ga0315291_114165982 102Ga0315293_108862333 103Ga0315293_109936833 104Ga0315899_102040354 105Ga0315899_109039343 106Ga0315909_109894433 107Ga0315285_109889812 108Ga0315904_108961542 109Ga0315906_108071171 110Ga0315284_120761421 111Ga0315902_107648402 112Ga0315268_116977201 113Ga0315286_114225881 114Ga0334986_0570213_23_232 115Ga0335031_0397430_720_866
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1RCM40_10442312 2RCM30_10186493 3JGI25908J49247_100045251 4Ga0075470_101628503 5Ga0070749_103552711 6Ga0315906_108071171 7Ga0315286_114225881
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1RCM40_10442312 2RCM30_10186493 3JGI25908J49247_100045251 4Ga0075470_101628503 5Ga0070749_103552711 6Ga0315906_108071171 7Ga0315286_114225881
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.33% β-sheet: 31.67% Coil/Unstructured: 40.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF06378	DUF1071	11.30
PF09588	YqaJ	6.09
PF04404	ERF	5.22
PF07120	DUF1376	3.48
PF13392	HNH_3	2.61
PF00145	DNA_methylase	0.87
PF01391	Collagen	0.87
PF00182	Glyco_hydro_19	0.87
PF02767	DNA_pol3_beta_2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	3.48
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.87
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.87
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	0.87
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	0.87

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	0.87 %
Unclassified	root	N/A	1.74 %
Viruses	superkingdom	All Organisms → Viruses	97.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.87 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	85.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	85.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %
Unclassified	root	N/A	1.74 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	85.22 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	85.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	85.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	12.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %
Unclassified	root	N/A	1.74 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	85.22 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001839\|RCM40_1044231	Not Available	1342	Open in IMG/M
3300001842\|RCM30_1018649	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1118	Open in IMG/M
3300001849\|RCM26_1043049	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	813	Open in IMG/M
3300003277\|JGI25908J49247_10004525	All Organisms → Viruses → Predicted Viral	4451	Open in IMG/M
3300003277\|JGI25908J49247_10104045	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	682	Open in IMG/M
3300003393\|JGI25909J50240_1001001	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7153	Open in IMG/M
3300003394\|JGI25907J50239_1006975	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2702	Open in IMG/M
3300003394\|JGI25907J50239_1044220	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	919	Open in IMG/M
3300005581\|Ga0049081_10077664	All Organisms → Viruses → Predicted Viral	1247	Open in IMG/M
3300005581\|Ga0049081_10139252	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	892	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.65%
Terrestrial	Environmental → Terrestrial	4.35%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	4.35%
Freshwater	Environmental → Aquatic → Freshwater	79.13%
Marine	Environmental → Aquatic → Marine	16.52%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	7.83%
Creek	Environmental → Aquatic → Freshwater → Creek	6.09%
Harbor	Environmental → Aquatic → Marine → Harbor	0.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.48%
Lake	Environmental → Aquatic → Freshwater → Lake	32.17%
Lentic	Environmental → Aquatic → Freshwater → Lentic	28.70%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.48%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.87%
Pond	Environmental → Aquatic → Freshwater → Pond	0.87%
River	Environmental → Aquatic → Freshwater → River	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	5.22%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.48%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.87%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.61%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.83%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	26.96%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	24.35%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.83%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	6.09%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	5.22%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.83%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.87%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	3.48%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.61%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.48%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	6.09%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	5.22%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.35%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.48%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.61%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	20.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	11.30%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.61%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.87%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	6.96%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.74%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.87%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	0.87%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	2.61%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.87%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	0.87%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.83%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001839	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM40, ROCA_DNA238_2.0um_Ob_C_3b	Environmental	Open in IMG/M
3300001842	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM30, ROCA_DNA203_0.2um_MCP-S_C_2b	Environmental	Open in IMG/M
3300001849	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM26, ROCA_DNA190_2.0um_MCP-N_C_2b	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M

Showing 1 to 10 of 83 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
RCM40_10442312	3300001839	Marine Plankton	MKLKNELQDIYDAQSEVYYCCYCLEPQGDKVTCCFESHFVEFKYLFPNDQQ
RCM30_10186493	3300001842	Marine Plankton	MKLKNELEDIYEDLWNVYFCCYCLEPQDGKLVCCHENHFVEFKYLDADCRQEIAQEVLNG
RCM26_10430493	3300001849	Marine Plankton	MKLKNELQDIYEDLWNVYFCCYCLQPQDGKLVCCHENHFVEFKYLDADCRQEIAQEVLNG
JGI25908J49247_100045251	3300003277	Freshwater Lake	KIQDELQAIYEDESNVYYCCYCLQPQNEKIGCCHENHFVEFKYLDNDCKQEIAQEILNG*
JGI25908J49247_101040453	3300003277	Freshwater Lake	DEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG*
JGI25909J50240_100100111	3300003393	Freshwater Lake	MKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCQENHFVEFKYLFPNDQKQIAQEILNG
JGI25907J50239_10069752	3300003394	Freshwater Lake	MKIQDELQAIYEDESNVYYCCYCLQPQNEKIGCCHENHFVEFKYLDNDCKQEIAQEILNG
JGI25907J50239_10442202	3300003394	Freshwater Lake	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0049081_100776645	3300005581	Freshwater Lentic	MKIKDELQAIYEDEENVYYCCYCLQPQNGKIGCCQENHFVEFKYLDNDCRQEIAQEILNG
Ga0049081_101392523	3300005581	Freshwater Lentic	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCQENHFVEFKHLDNDCRQEIAQEILNG
Ga0049081_101503174	3300005581	Freshwater Lentic	MKIKDELQAIYEDEENVYYCCYCLEPQEEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0049081_101716563	3300005581	Freshwater Lentic	MKIQDELQAIYEDEENVYYCCYCLQPQNEKIGCCHENHFVEFKYLDNDCKQE
Ga0049081_103098432	3300005581	Freshwater Lentic	MKIKDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0075470_101628503	3300006030	Aqueous	MKIKEELQEIYKQEANTPYCCYCLQPQDDKIGCCQENHFVAFKYLNQQDQQQIAEEILNG
Ga0070749_103552711	3300006802	Aqueous	MKMKDELQAIYEDQQDVYYCCYCLEPQGEKVTCCFENHFVEFKYLFPNDQQQIAQEILNA
Ga0070749_106846791	3300006802	Aqueous	MKIKDELQAIYEDQAEVYYCCYCLEPQEEKITCCYENHFVEFKYLFPNDQKQIAQ
Ga0070749_107503152	3300006802	Aqueous	MKIKDEMQAIYEDEANVYYCCYCLQPQAGKIGCCQENHFVEFRYLDNDCKQQIAQEILNG
Ga0070748_11488873	3300006920	Aqueous	MKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDKKQIAQEILNG
Ga0075458_100828723	3300007363	Aqueous	MKMKDELQAIYEDQQDVYYCCYCLEPQGEKVTCCFENHFVEFKYLFPNDKKQIAQEILNG
Ga0102859_11053952	3300007708	Estuarine	MKIQDELQAIYEDEENVYYCCYCLQPQNGKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0114841_11807062	3300008259	Freshwater, Plankton	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCRQEISQEILNG
Ga0114337_10804596	3300008262	Freshwater, Plankton	MTIKDELQAIYEDEENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0114876_10196244	3300008448	Freshwater Lake	MKIKDELQAIYEDEENVYYCCYCLEPQGEKVTCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0114876_11593442	3300008448	Freshwater Lake	MKMKDELQAIYEDEENVYYCCYCLEPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0114876_12292951	3300008448	Freshwater Lake	MKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILN
Ga0102829_11937411	3300009026	Estuarine	MKIKDELQAIYEDESNVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0114968_100319596	3300009155	Freshwater Lake	MKELLETIYEDESNVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCKQEIAQEILNG*
Ga0114968_105421742	3300009155	Freshwater Lake	MKIQDELQAIYEDESNVFYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQDIAQEILNG
Ga0114970_100168053	3300009163	Freshwater Lake	MKIQDELQAIYEDESNVYYCCYCLQPQEEKIGCCQENHFVEFKYLDTDCKQEIAQEILNG
Ga0114975_106636401	3300009164	Freshwater Lake	NLSNVSKFWRKMKIQDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG*
Ga0115547_11585311	3300009426	Pelagic Marine	MKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQ
Ga0137675_10063663	3300010966	Pond Fresh Water	MKMKDELQAIYEDQAEVYYCCYCLEPQGEKITCCYENHFVEFKYLFPNDKKQVAQEILNG
Ga0157203_10571282	3300012663	Freshwater	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDYRQEIAQEILNG
Ga0157498_10803511	3300012666	Freshwater, Surface Ice	IQDELQAIYEDESNVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCKQEIAQEILNG*
Ga0164293_103360991	3300013004	Freshwater	SSGGKMKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCYENHFVEFKYLFPNDQKQIAQEILNG*
Ga0177922_112272651	3300013372	Freshwater	MKIQDELQAIYEDEENVYYCCYCLEPQGEKITCCYENHFVEFKYLFPNDQKQIAQEI
Ga0181350_10451221	3300017716	Freshwater Lake	QSSGGKMKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0181350_11221992	3300017716	Freshwater Lake	MKIKDELQAIYEDESNVYYCCYCLQPQNGKIGCCHENHFVEFKYLDNDCRQEIAQEILNG
Ga0181347_11417371	3300017722	Freshwater Lake	MKIKDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQDIAQEILNG
Ga0181347_11555523	3300017722	Freshwater Lake	MKIQDELQAIYEDEENVYYCCYCLEPQGEKITCCQENHFVEFKYLFPNDQKQIAQEILNG
Ga0181365_10942551	3300017736	Freshwater Lake	GKMKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0181344_10397951	3300017754	Freshwater Lake	CNQSKGTSMKMKDELQAIYEDEENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0181356_11749273	3300017761	Freshwater Lake	MKMKDELQAIYEDEENVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCRQEIAQEILNG
Ga0181356_12127191	3300017761	Freshwater Lake	MKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILNGXFQPNNKMF
Ga0181357_12546741	3300017777	Freshwater Lake	MKMKDELQAIYEDEENVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCKQEI
Ga0181349_12376262	3300017778	Freshwater Lake	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCQENHFVEFKHLDNDCKQEIAQEILNG
Ga0181346_12094594	3300017780	Freshwater Lake	MKMKDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCRQEIAQEILNG
Ga0181348_12144482	3300017784	Freshwater Lake	MKIKDELQAIYEDEENVYYCCYCLEPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0181563_100531575	3300018420	Salt Marsh	MKIKDELQAIYEDEENVYYCCYCLQPQAGKIGCCQENHFVEFKYLFPNDQKQIAQEILNG
Ga0181359_11258853	3300019784	Freshwater Lake	MKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCYENHFVEFKYLFPNDQKQIAQEILNG
Ga0181359_11819612	3300019784	Freshwater Lake	MKMKDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKHLDNDCKQEIAQEILNG
Ga0181359_12298063	3300019784	Freshwater Lake	MKIKDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCRQEIAQEILNG
Ga0211734_112169092	3300020159	Freshwater	MKIKDELQAIYEDEENVYYCCYCLQPQGEKIGCCHENHFVEFRYLDNDCKQEIAQEILNG
Ga0211729_114071131	3300020172	Freshwater	IYEEQEEVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0211731_111800023	3300020205	Freshwater	GGQMKIKDELQAIYEDEENVYYCCYCLQPQGEKIGCCHENHFVEFRYLDNDCKQEIAQEILNG
Ga0207942_10141623	3300020549	Freshwater	MKIKDELQAIYEDKENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0213920_100220111	3300021438	Freshwater	MKMKDELQVIYEDQADIYYCCYCLEPQGEKVTCCFENHFVEFKYLFPNDQQQIAQEILNG
Ga0213920_10093139	3300021438	Freshwater	MKMKDELQAIYEDQADVYYCCYCLEPQGEKVTCCFENHFVEFKYLFPNDQQQIAQEILNA
Ga0213920_10248156	3300021438	Freshwater	MKMKDELQAIYEDQADVYYCCYCLEPQDEKVTCCSENHFVEFKYLFPNDQQQIAQEILNA
Ga0213921_10129136	3300021952	Freshwater	MKIKDEMQAIYEDEANVYYCCYCLQPQAGKIGCCQENHFVEFRYLDNDCQQQIAEEILNG
Ga0213921_10191013	3300021952	Freshwater	KDELQAIYEDQADVYYCCYCLEPQGEKVTCCFENHFVEFKYLFPNDQQQIAQEILNA
Ga0213922_100169917	3300021956	Freshwater	MKIKDEMQAIYEDEANVYYCCYCLQPQAGKIGCCQENHFVEFRYLDNDCKQQIAEEILNG
Ga0213922_10661582	3300021956	Freshwater	MKIKDELQTIYEDQAEVYYCCYCLEPQGEKVTCCFENHFVEFKYLFPNDQQQIAQEILNA
Ga0222714_100867768	3300021961	Estuarine Water	MKIKDKLQAIYEDQAEVYYCCYCLEPQGEKITCCYENHFVEFKYLFPNDQKQIAQEILNG
Ga0222714_106297732	3300021961	Estuarine Water	MKIQDELQAIYEDESNVFYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0222712_107904391	3300021963	Estuarine Water	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQDIAQEILNG
Ga0222712_108182392	3300021963	Estuarine Water	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCRQEIAQEILNG
Ga0181353_10026861	3300022179	Freshwater Lake	MKMKDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0214921_1000561924	3300023174	Freshwater	MKMKDELQDIYEDQQDVYYCCYCLEPQGEKVTCCFENHFVEFKYLFPNDQQEIAQEILNG
Ga0214919_1000189134	3300023184	Freshwater	MKIQDELQAIYEDQADVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCRQEIAQEILNG
Ga0255147_100016915	3300024289	Freshwater	MKLKNELEDIYEDLWNVYFCCYCLQPQDGKLVCCHENHFVEFKYLDADCRQEIAQEVWNG
Ga0208147_10863522	3300025635	Aqueous	MKIKDELQAIYEDESNVYYCCYCLQPQAGKIGCCQENHFVEFKYLDNDCKQQIAEEILNG
Ga0208916_103858562	3300025896	Aqueous	MKIKDELQAIYEDQADVYYCCYCLEPQGEKVTCCFENHFVEFKYLFPNDQQQIAQEILNA
Ga0208916_104921392	3300025896	Aqueous	MKIKDKLQAIYEDQAEVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0255105_10870072	3300027143	Freshwater	MKIQDELQAIYEDEENVYYCCYCLQPQNEKIGCCHENHFVEFKYLDNDCKQEIAQEILN
Ga0255113_10137942	3300027147	Freshwater	MKIKDELQAIYEDEENVYYCCYCLQPQNEKIGCCHENHFVEFKYLDNDCKQEIAQEILNG
Ga0208554_10431001	3300027212	Estuarine	GGQMKIQDELQAIYEDESNVYYCCYCLQPQNGKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0208974_10280964	3300027608	Freshwater Lentic	MKMKDELQAIYEDKENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0208974_10711262	3300027608	Freshwater Lentic	MKIQDELQAIYEDKENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCRQEIAQEILNG
Ga0208975_11812342	3300027659	Freshwater Lentic	HQSSGGKMKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCKQEIAQEILNG
Ga0209599_100286517	3300027710	Deep Subsurface	MKDELQAIYEDEENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0209297_100076921	3300027733	Freshwater Lake	MKIKDELQAIYEDEENVYYCCYCLEPQGEKIGCCHENHFVEFKYLDNDCKQEIAQEILNG
Ga0209087_100822013	3300027734	Freshwater Lake	MKIQDELQAIYEDESNVFYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCKQEIAQEILNG
Ga0209087_10312513	3300027734	Freshwater Lake	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCKQDIAQEILNG
Ga0209596_10586007	3300027754	Freshwater Lake	MKELLETIYEDESNVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCKQDIAQEILNG
Ga0209296_100225310	3300027759	Freshwater Lake	MKIKDELQAIYEDQADVYYCCYCLETQGEKITCCQENHFVEFKYLFPNDQKQIAQEILNG
Ga0209296_10805602	3300027759	Freshwater Lake	MKDLLEDIYKDEANVFYCCYCLQPQEEKIGCCHENHFVEFKYLDNDCKQEIAQEILNG
Ga0209088_104016682	3300027763	Freshwater Lake	MKIQDELQAIYEDEENVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCKQEIAQEILNG
Ga0209086_1000587211	3300027770	Freshwater Lake	MKELLETIYEDESNVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCKQEIAQEILNG
Ga0209354_104344342	3300027808	Freshwater Lake	MKIQDELQAIYEDEENVYYCCYCLQPQGEKIGCCHENHFVEFKYLDNDCRQEIAQEILNG
Ga0209990_103958442	3300027816	Freshwater Lake	QAIYEDEENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0209253_102473553	3300027900	Freshwater Lake Sediment	MKLKDELQAIYEDQAEVYYCCYCLEPQGEKITCCYENHFVEFKYLFPNDQKQIAQEILNG
Ga0209191_10034173	3300027969	Freshwater Lake	MKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCHENHFVEFKYLDNDCKQEIAQEILNG
Ga0247723_10049449	3300028025	Deep Subsurface Sediment	MKIKDELQAIYEEQEEVYYCCYCLEPQGEKITCCYENHFVEFKYLFPNDKKQIAQEILNG
Ga0247723_100734412	3300028025	Deep Subsurface Sediment	MKIKDELQAIYEEQEEVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0247723_10838334	3300028025	Deep Subsurface Sediment	MKMKDELQAIYEDQAEVYYCCYCLEPQGEKITCCYENHFVEFKYLFPNDKKQIAQEILNG
Ga0247722_100182644	3300028027	Deep Subsurface Sediment	MKIQDELQAIYEDEENVYYCCYCLQPQGEKVGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0135227_10496432	3300029302	Marine Harbor	MKIKDELQAIMEYEANVYYCCYCLQPQAGKIGCCQENHFVAFNDLYQQDQQQIAEEILNG
Ga0315291_107922384	3300031707	Sediment	MKIQDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0315291_109063893	3300031707	Sediment	MKIQDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDKDCKQEIAQEILNG
Ga0315291_114165982	3300031707	Sediment	MKVQDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILNG
Ga0315293_108862333	3300031746	Sediment	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEILN
Ga0315293_109936833	3300031746	Sediment	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQ
Ga0315899_102040354	3300031784	Freshwater	MKMKDELQAIYEDEENVYYCCYCLEPQGEKITCCYENHFVEFKYLFPNDQKQIAQEILNG
Ga0315899_109039343	3300031784	Freshwater	MKIKDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFRYLDNDCKKQIAQEILNG
Ga0315909_109894433	3300031857	Freshwater	MKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCFENHFVEFKYLFPNDQKQIAQE
Ga0315285_109889812	3300031885	Sediment	MKIQDELQAIYEDESNVYYCCYCLQSQGEKIGCCQENHFVEFKYLDNDC
Ga0315904_108961542	3300031951	Freshwater	MKIKDELQAIYEDQAEVYYCCYCLEPQGERITCCYENHFVEFKYLFPNDQKQIAQEILNG
Ga0315906_108071171	3300032050	Freshwater	RSLGCQTRATHQSSGGQMKIKDELQAIYEEQEEVYYCCYCLEPQNEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0315284_120761421	3300032053	Sediment	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCK
Ga0315902_107648402	3300032093	Freshwater	MKIKDELQAIYEEQEEVYYCCYCLEPQNEKITCCFENHFVEFKYLFPNDQKQIAQEILNG
Ga0315268_116977201	3300032173	Sediment	MKIQDELQAIYEDESNVYYCCYCLQPQGEKIGCCQENHFVEFKYLDNDCKQEIAQEIL
Ga0315286_114225881	3300032342	Sediment	MKIQDELQAIYEDEENVYYCCYCLQPQGEKIGCCQENHFVEFKYLDND
Ga0334986_0570213_23_232	3300034012	Freshwater	MKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCYENHFVEFKYLFPNDQKQIAQEILNGWFQPNNKMF
Ga0335031_0397430_720_866	3300034104	Freshwater	MKIKDELQAIYEDEENVYYCCYCLEPQGEKITCCYENHFVEFKYLFPND

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079808

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences