Metagenome / Metatranscriptome Family F079834

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F079834
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	67 residues
Representative Sequence	MTRMMRAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDTDYLLAVLFISVVVWIAKG
Number of Associated Samples	78
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.43 %
% of genes near scaffold ends (potentially truncated)	29.57 %
% of genes from short scaffolds (< 2000 bps)	88.70 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (59.130 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.217 % of family members)
Environment Ontology (ENVO)	Unclassified (46.957 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.391 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.95% β-sheet: 0.00% Coil/Unstructured: 41.05%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF12850	Metallophos_2	6.09
PF06725	3D	5.22
PF04392	ABC_sub_bind	4.35
PF03401	TctC	3.48
PF00313	CSD	2.61
PF13676	TIR_2	2.61
PF14347	DUF4399	1.74
PF07883	Cupin_2	1.74
PF00571	CBS	1.74
PF13602	ADH_zinc_N_2	1.74
PF07045	DUF1330	1.74
PF02586	SRAP	1.74
PF00816	Histone_HNS	0.87
PF07681	DoxX	0.87
PF07345	DUF1476	0.87
PF05974	DUF892	0.87
PF13424	TPR_12	0.87
PF13683	rve_3	0.87
PF02738	MoCoBD_1	0.87
PF15956	DUF4760	0.87
PF03928	HbpS-like	0.87
PF11684	DUF3280	0.87
PF03592	Terminase_2	0.87
PF13924	Lipocalin_5	0.87
PF09913	DUF2142	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.35
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.48
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.74
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.74
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.87
COG2916	DNA-binding protein H-NS	Transcription [K]	0.87
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.87
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.87
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.13 %
Unclassified	root	N/A	40.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.13 %
Unclassified	root	N/A	40.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.13 %
Unclassified	root	N/A	40.87 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.22 %
Unclassified	root	N/A	40.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.09 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.22 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.43 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.61 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10017117	All Organisms → cellular organisms → Bacteria → Proteobacteria	1991	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10109509	Not Available	678	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10109947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1078019	Not Available	582	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10110940	Not Available	576	Open in IMG/M
3300004633\|Ga0066395_10123731	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300005167\|Ga0066672_10134207	All Organisms → cellular organisms → Bacteria → Proteobacteria	1541	Open in IMG/M
3300005179\|Ga0066684_10885535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300005332\|Ga0066388_100567979	Not Available	1761	Open in IMG/M
3300005332\|Ga0066388_100641562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1678	Open in IMG/M
3300005332\|Ga0066388_100805544	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300005363\|Ga0008090_15637058	Not Available	680	Open in IMG/M
3300005406\|Ga0070703_10378477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300005445\|Ga0070708_100704087	All Organisms → cellular organisms → Bacteria → Proteobacteria	951	Open in IMG/M
3300005467\|Ga0070706_100612279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1012	Open in IMG/M
3300005468\|Ga0070707_100738736	Not Available	947	Open in IMG/M
3300005536\|Ga0070697_100855754	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005559\|Ga0066700_10201475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1375	Open in IMG/M
3300005713\|Ga0066905_100483107	Not Available	1026	Open in IMG/M
3300005713\|Ga0066905_101417269	Not Available	629	Open in IMG/M
3300005764\|Ga0066903_100289652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2577	Open in IMG/M
3300005764\|Ga0066903_101782410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1175	Open in IMG/M
3300005764\|Ga0066903_102336413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1033	Open in IMG/M
3300005764\|Ga0066903_103381017	Not Available	861	Open in IMG/M
3300006028\|Ga0070717_10827228	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300006797\|Ga0066659_11361577	Not Available	592	Open in IMG/M
3300009137\|Ga0066709_101928727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	821	Open in IMG/M
3300010046\|Ga0126384_10634872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	939	Open in IMG/M
3300010046\|Ga0126384_11404966	Not Available	651	Open in IMG/M
3300010359\|Ga0126376_10587731	Not Available	1050	Open in IMG/M
3300010360\|Ga0126372_11094463	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300010366\|Ga0126379_11551515	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300010366\|Ga0126379_12011687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300010376\|Ga0126381_103585460	Not Available	609	Open in IMG/M
3300010398\|Ga0126383_10279338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1656	Open in IMG/M
3300010398\|Ga0126383_11766070	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300010398\|Ga0126383_12366434	Not Available	616	Open in IMG/M
3300012200\|Ga0137382_10683082	Not Available	735	Open in IMG/M
3300012202\|Ga0137363_10447762	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300012207\|Ga0137381_11455179	Not Available	577	Open in IMG/M
3300012209\|Ga0137379_10714198	Not Available	908	Open in IMG/M
3300012211\|Ga0137377_10130745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2399	Open in IMG/M
3300012211\|Ga0137377_10806191	All Organisms → cellular organisms → Bacteria → Proteobacteria	871	Open in IMG/M
3300012361\|Ga0137360_10064062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2696	Open in IMG/M
3300012361\|Ga0137360_11381902	Not Available	607	Open in IMG/M
3300012362\|Ga0137361_10166513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1980	Open in IMG/M
3300012362\|Ga0137361_10331431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1395	Open in IMG/M
3300012582\|Ga0137358_10285766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1120	Open in IMG/M
3300012923\|Ga0137359_10729442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	862	Open in IMG/M
3300012958\|Ga0164299_11087466	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300012971\|Ga0126369_10616909	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300012971\|Ga0126369_12781067	Not Available	573	Open in IMG/M
3300014150\|Ga0134081_10340803	Not Available	548	Open in IMG/M
3300016294\|Ga0182041_11188430	Not Available	695	Open in IMG/M
3300016294\|Ga0182041_11389373	Not Available	644	Open in IMG/M
3300016294\|Ga0182041_11527088	Not Available	615	Open in IMG/M
3300016341\|Ga0182035_11697533	Not Available	571	Open in IMG/M
3300016357\|Ga0182032_11769827	Not Available	540	Open in IMG/M
3300016371\|Ga0182034_11798169	Not Available	540	Open in IMG/M
3300018431\|Ga0066655_10031138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2601	Open in IMG/M
3300018433\|Ga0066667_10193910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1485	Open in IMG/M
3300018468\|Ga0066662_10310117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1332	Open in IMG/M
3300021560\|Ga0126371_10318963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1684	Open in IMG/M
3300025910\|Ga0207684_10173364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1859	Open in IMG/M
3300027874\|Ga0209465_10452454	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300028878\|Ga0307278_10171953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	969	Open in IMG/M
3300031543\|Ga0318516_10047973	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300031543\|Ga0318516_10233390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1064	Open in IMG/M
3300031545\|Ga0318541_10203444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1096	Open in IMG/M
3300031545\|Ga0318541_10598978	Not Available	616	Open in IMG/M
3300031545\|Ga0318541_10744720	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300031564\|Ga0318573_10251889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	941	Open in IMG/M
3300031640\|Ga0318555_10303678	Not Available	864	Open in IMG/M
3300031640\|Ga0318555_10476476	Not Available	676	Open in IMG/M
3300031679\|Ga0318561_10493545	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M
3300031681\|Ga0318572_10289413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300031719\|Ga0306917_10051314	All Organisms → cellular organisms → Bacteria	2778	Open in IMG/M
3300031736\|Ga0318501_10237647	Not Available	961	Open in IMG/M
3300031736\|Ga0318501_10408124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300031768\|Ga0318509_10792087	Not Available	524	Open in IMG/M
3300031771\|Ga0318546_10276537	Not Available	1159	Open in IMG/M
3300031771\|Ga0318546_11112279	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031771\|Ga0318546_11124064	Not Available	552	Open in IMG/M
3300031795\|Ga0318557_10568642	Not Available	520	Open in IMG/M
3300031796\|Ga0318576_10400354	Not Available	649	Open in IMG/M
3300031832\|Ga0318499_10434320	Not Available	501	Open in IMG/M
3300031879\|Ga0306919_10100325	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300031879\|Ga0306919_10118811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1889	Open in IMG/M
3300031879\|Ga0306919_10157234	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300031879\|Ga0306919_10471339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	967	Open in IMG/M
3300031880\|Ga0318544_10067088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1319	Open in IMG/M
3300031890\|Ga0306925_10407736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1456	Open in IMG/M
3300031910\|Ga0306923_12211126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300031912\|Ga0306921_10114772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3132	Open in IMG/M
3300031912\|Ga0306921_12274359	Not Available	569	Open in IMG/M
3300031946\|Ga0310910_10584748	Not Available	885	Open in IMG/M
3300031947\|Ga0310909_10658270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	872	Open in IMG/M
3300031954\|Ga0306926_12047526	Not Available	642	Open in IMG/M
3300031959\|Ga0318530_10070657	Not Available	1350	Open in IMG/M
3300031981\|Ga0318531_10273304	Not Available	763	Open in IMG/M
3300032001\|Ga0306922_10006461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	11249	Open in IMG/M
3300032001\|Ga0306922_10135856	All Organisms → cellular organisms → Bacteria	2622	Open in IMG/M
3300032001\|Ga0306922_10725439	Not Available	1044	Open in IMG/M
3300032001\|Ga0306922_11996206	Not Available	565	Open in IMG/M
3300032052\|Ga0318506_10126626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1107	Open in IMG/M
3300032059\|Ga0318533_11130519	Not Available	573	Open in IMG/M
3300032076\|Ga0306924_10046914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4759	Open in IMG/M
3300032180\|Ga0307471_103915885	Not Available	526	Open in IMG/M
3300032261\|Ga0306920_100782644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1401	Open in IMG/M
3300032261\|Ga0306920_101283604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1054	Open in IMG/M
3300032261\|Ga0306920_103077891	Not Available	627	Open in IMG/M
3300032261\|Ga0306920_103842357	Not Available	548	Open in IMG/M
3300033289\|Ga0310914_10105187	All Organisms → cellular organisms → Bacteria → Proteobacteria	2435	Open in IMG/M
3300033289\|Ga0310914_10149157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2061	Open in IMG/M
3300033289\|Ga0310914_10614549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	979	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.35%
Loam	Environmental → Terrestrial → Soil → Loam	15.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.09%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100171172	3300000597	Forest Soil	MTRMMCAWRQANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDTDYLLAALFISVVVWIAIAKFLPST*
AF_2010_repII_A1DRAFT_101095092	3300000597	Forest Soil	MTRMTCAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGXDTDYLLAALFLSVVV
AF_2010_repII_A1DRAFT_101099472	3300000597	Forest Soil	MTRIMRSWRKANAYVQSGQHAKAAHWLIRTLEILDGDQALRRRSRYMDTDYLLAVLFVLVVVWIAKG*
AF_2010_repII_A100DRAFT_10780191	3300000655	Forest Soil	MTRTMRAWRKANAYVRSGHHAKAAYWLSRTLAMLDGNRSPRRRTKYIDADYLLAALFMLVVVLIAKG*
AF_2010_repII_A001DRAFT_101109402	3300000793	Forest Soil	MRAWRKANAYVRSGHHAKAAYWLSRTLAMLDGNRSPRRRTKYIDADYLLAALFMLVVVLIAKG*VKAPTPFGDKVPNS
Ga0066395_101237312	3300004633	Tropical Forest Soil	MTRMMCAWRQANAYMRSGEHAKAVYWLSRTLAILDNERPRRHRLAGMDTDYLLAALFISVVVWIAIAKFSPST*
Ga0066672_101342074	3300005167	Soil	MTRTMRAWRKANAHVRSGQHAKAAYWLSRTLAILDREQPPRRRWKYIEADYLLAALFVLVVVLAAKG*
Ga0066684_108855351	3300005179	Soil	MTRTMRAWRKANAHVRSGQHAKAAYWLSRTLAILDREQPPRRRWKYIEADYLLAALFVLVVV
Ga0066388_1005679793	3300005332	Tropical Forest Soil	MTRLMCAWRQANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDIDYLLAALFISVVVWIAIAKFLPST*
Ga0066388_1006415623	3300005332	Tropical Forest Soil	MTKTMRAWRKANAYVRSGDHARAAYWLSRTLVKLDGNRVPRRRTKYIDADYLLAALFMLVVILIAKG*
Ga0066388_1008055442	3300005332	Tropical Forest Soil	MTRMTCAWRKANAYMGSGEHAKAIYWLSRTLAILDNERPRRRRLEDTDYLLAALFISVVVGIAIAKFLPST*
Ga0008090_156370581	3300005363	Tropical Rainforest Soil	MTRMTCAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEVMDTDYLLAALFISVVVGIAIAKFLPST*
Ga0070703_103784771	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRAWRKANRYVRSGQHAKAAYWLSRTLAILDGERARRRRLEGIEIDCLLGALLVLV
Ga0070708_1007040871	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTKTMRAWRKANAYVRSGHHAKAAYWLSRTLLMLDGNRVPQRRTKHIDADYLLAALFMLVVILIAKG*
Ga0070706_1006122792	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTMRAWRKANAYVRSGQHAKAAYWLSQTLEMLDRDRTPRRRSKFMETDYLLAALFVLVVVLIGKG*
Ga0070707_1007387361	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTRMMRAWRKANAYVRSGQHAKAIYWLSRTQAILAGGRPRQRRLEGMDTIGYMLAALFVLVVVWIAKG*
Ga0070697_1008557542	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRAWRKANAYVRSGQHAKAAYWLSQTLEMLDRDRTPRRRSKFMETDYLLAALFVLVVVLIGKG*
Ga0066700_102014751	3300005559	Soil	MTKTMRAWRKANAYVRSGHHAKAAYWLSRTLLMLDGNRVPQRRTKHIDADYLLAALFML
Ga0066905_1004831072	3300005713	Tropical Forest Soil	MTRMMRAWRKANAYVRSGQHAKAIYWLSRTQAILDGGRPRQRRLEGMDTIGYMLAALFVLVVAWIAKG*
Ga0066905_1014172692	3300005713	Tropical Forest Soil	MTRMTCAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEIMDTDYLLAVFISVVVWIAIAKFLPST*
Ga0066903_1002896527	3300005764	Tropical Forest Soil	MPHDKNDARLAEANAHMRSGEHAKAVYWLSRTLAILDNERPRRRRLEGMDIEYLLAALFISVVVWIAKG*
Ga0066903_1017824102	3300005764	Tropical Forest Soil	MTKMMRSWRKANAYVRSGQHAKAAHYLTWTLEILTGDQALRRRPKYMDTDYLLAALFVLVVVWIAKG*
Ga0066903_1023364132	3300005764	Tropical Forest Soil	MTRMMRSWRKANAYVRSGQHAKAAHCLTRTLEILAGDQALRPRRKYMETDYLLAALLVLVVVWMAKG*
Ga0066903_1033810173	3300005764	Tropical Forest Soil	MTRTMRSWRKANAYVRSGQHAKAAHWLTRTLEILDGDQIFRRRPKYMDTDYLLAALFVLVVVWIAKG*
Ga0070717_108272282	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTMRAWRKANAYVRSGDHAKSAYWLSRTLAMLDGNRAPRRRKYIDADYLLAALFMLVVVLIAKG*
Ga0066659_113615771	3300006797	Soil	MTKTMRAWRKANAYVRSGQHAKAAYWLSRTLAILDGERLRRRRLEGMEIDCLLGALFVLVVVLITKG*
Ga0066709_1019287271	3300009137	Grasslands Soil	MRAWRKANAHVRSGQHAKAAYWLSRTLAILDREQPPRRRWKYIEADYLLAALFVLVVVLAAKG*
Ga0126384_106348723	3300010046	Tropical Forest Soil	MTKVRCAWRKANAYVRSGQHAKAIYWLSRTQEILDGDRPHGRRSKSMDTDYLLAVLFVLVLFWIAKG*
Ga0126384_114049661	3300010046	Tropical Forest Soil	MTRMTCAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEDTDYLLAALFISVVVGIAIAKFLPST*
Ga0126376_105877311	3300010359	Tropical Forest Soil	MRSWRKANAYVQSGQHAKAAHWLIRTLEILDGDQALRRRLRYMDTDYLLAALFVLVVVWIAKG*
Ga0126372_110944632	3300010360	Tropical Forest Soil	MMCAWRQANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDIDYLLAALFISVVVWIAIAKFLPST*
Ga0126379_115515152	3300010366	Tropical Forest Soil	MMCAWRQANAYMRSGEHAKAVYWLSRTLAILDNERPRRHRLAGMDTDYLLAALFISVVVWIAIAKFLPST*
Ga0126379_120116871	3300010366	Tropical Forest Soil	MRSWRKANAYVQSGQHAKAAHWLIRTLEILDGDQALRRRSRYMDTDYLLAALFVLVVVWIAKG*
Ga0126381_1035854602	3300010376	Tropical Forest Soil	MRSWRKANAYVRSGQHAKAAHWLTRTLEILDGDQIFRRRPKYMDTDYLLAALFVLVVVWIAKG*
Ga0126383_102793382	3300010398	Tropical Forest Soil	MTKVRCAWRKANAYVRSSQHAKAIYWLSRTQEILDGDRPHGRRSKSMDTDYLLAVLFVLVLFWIAKG*
Ga0126383_117660702	3300010398	Tropical Forest Soil	MMCAWRQANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDTDYLLAALFISVVVWIAIAKFLPST*
Ga0126383_123664341	3300010398	Tropical Forest Soil	MTRAMRAWRKANAYVRSGQHARAAYWLSRTLAMLDRDQPLRRRSKYMDTDYLLAALFVLVVVWIAKG*
Ga0137382_106830821	3300012200	Vadose Zone Soil	MTKTMRAWRKANAYVRSGHHAKAAYWLSRTLLMLDGNRVPQRRTKHIDADYLLAALFMLVVVLIAKG*
Ga0137363_104477621	3300012202	Vadose Zone Soil	MRAWRKANGYVRSGQHAKAAYWLSQTLEMLDRDRTPRRRSKFMETDYLLAALFVLVVVLIGKG*
Ga0137381_114551791	3300012207	Vadose Zone Soil	MMRAWRKANAYVRSGQHAKAIYWLSRTQAILDGGRPRQRRLEGMDTIGYMLAALFVLVVVWIAKG*
Ga0137379_107141983	3300012209	Vadose Zone Soil	MTRMMRAWRKANAYVRSGQHAKAIYWLSRTQAILDGGRPRQRRLEGMDTIGYMLAALFVLVVVWIAKG*
Ga0137377_101307453	3300012211	Vadose Zone Soil	GYVRSGHHAKAAYWFRRTLAILDRDRIPRRRSKCIETNYLFEALFVLIVVWIAKG*
Ga0137377_108061912	3300012211	Vadose Zone Soil	MMRAWRKANAYVRSGQHAKAIYWLSRTQAILDGGQPRQRRLEGMDTIGYMLAALFVLVVVWIAKG*
Ga0137360_100640622	3300012361	Vadose Zone Soil	MRAWRKANAYVRSGQHAKAAYWLSRTLAMLDRDQPPRRRSKYMETDYLLAALFVLVVVWIAKG*
Ga0137360_113819021	3300012361	Vadose Zone Soil	MRAWRKANGYVRSGQHAKAAYWLSQTLEMLDRDRTPRRRSKFTETDYLLAALFVLVVVLIGKG*
Ga0137361_101665132	3300012362	Vadose Zone Soil	MTRTMRAWRKANAYVRSGQHAKAAYWLSRTLAMLDRDQPPRRRSKYMETDYLLAALFVLVVVWIAKG*
Ga0137361_103314312	3300012362	Vadose Zone Soil	MRAWQKANRYVRSGQHAKAAYWLSRTLAMLDRHQPSRRRTKYIDADYLLAALFALVVVLIAKG*
Ga0137358_102857662	3300012582	Vadose Zone Soil	MGAWRKANAYVRSGQHAKAAYWLSRTLAMLDRDQPPRRRSKYMETDYLLAALFVLVVVWIAKG*
Ga0137359_107294421	3300012923	Vadose Zone Soil	MTRTMRAWRKANGYVRSGQHAKAAYWLSQTLEMLDRDRTPRRRSKFTETDYLLAALFVLVVVLIGKG*
Ga0164299_110874662	3300012958	Soil	MRAWRKANAYVRSGDHAKSAYWLSRTLAMLDGNRAPRRRKYIDADYLLAALFMLVV
Ga0126369_106169091	3300012971	Tropical Forest Soil	MMCAWRQANAHMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDTDYLLAALFISVVVWIAIAKFLPST*
Ga0126369_127810672	3300012971	Tropical Forest Soil	MRSWRKASAYVQSGQHAKAAHWLIRILEILDGDQALRRRSRYMDTDYLLAALFVLVVVWIAKG*
Ga0134081_103408031	3300014150	Grasslands Soil	HTNEKLANVHLGNVAMTNTMRAWRKANAYVRSGQHAKAAYWLSRTLAILDGERLRRRRLEGMEIDCLLGALFVLVVVLAAKG*
Ga0182041_111884301	3300016294	Soil	GMTRIMRSWRKANAYVQSGQHAKAAHWLIRTLEILDGDQALRHRSRYMDTDYLLAALFVLVVVWIAKG
Ga0182041_113893731	3300016294	Soil	MTRMMRAWRRANAHMRSGEHAKAVYWLSRTLAILDNERPRRRRLEGIDIDYLLAALFILVVVWIAKG
Ga0182041_115270881	3300016294	Soil	MTKMMRSWRKANACVRSGQHAKAAHYLTRTLEILTGDQALRRRPKFVDTDYLLAALFVLVVVWIAKG
Ga0182035_116975331	3300016341	Soil	MRAWRKANAYVRSGNHAKAAYWLSRTLAMLDGNRSPRRRTKYIDADYLLAALFMLVVVLIAKG
Ga0182032_117698271	3300016357	Soil	MTRTMRAWRKANAYVRSGHHAKAAYWLSRTLAMLDGNRSPRRRTKYIDADYLLAAL
Ga0182034_117981691	3300016371	Soil	MTRMMRAWRRANAHMRSGEHAKAVYWLSRTLAILDNERPRRRRLEGMDIDYLLAALIVLVVVWI
Ga0066655_100311385	3300018431	Grasslands Soil	MTRTMRAWRKANAHVRSGQHAKAAYWLSRTLAILDREQPPRRRWKYIEADYLLAALFVVVVVLAAKG
Ga0066667_101939102	3300018433	Grasslands Soil	MTRTMRAWRKANAHVRSGQHAKAAYWLSRTLAILDREQPPRHRWKYIEADYLLAALFVLVVVLAAKG
Ga0066662_103101172	3300018468	Grasslands Soil	MTRTMRAWRKANAHVRSGQHAKAAYWLSRTLAILDREQPPRRRWKYIEADYLLAALFVLVVVLAAKG
Ga0126371_103189633	3300021560	Tropical Forest Soil	MTRMTCAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEIMDTDYLLAVFISVVVWIAIAKFLPST
Ga0207684_101733642	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTKTMRAWRKANAYVRSGHHAKAAYWLSRTLLMLDGNRVPQRRTKHIDADYLLAALFMLVVILIAKG
Ga0209465_104524542	3300027874	Tropical Forest Soil	MTRMTCAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEDTDYLLAALFISVVVWIAIAKFLPST
Ga0307278_101719531	3300028878	Soil	MRAWRKANAYVRSDQHAKAAYWLSRTLAELDRGQPPRRRSKYMETDYLLAALFVLVVVWIAKG
Ga0318516_100479733	3300031543	Soil	MTRMTCAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEVMDTDYLLAALFISVVVGIAIAKFLPST
Ga0318516_102333902	3300031543	Soil	MTTTMRAWRKANAYVRSGHHAKAAYWLSRTLVMLDGNRVPRRRTKYIDADYLLAALFMLVVILIAKG
Ga0318541_102034442	3300031545	Soil	MTKMMRSWRKANAYVRSGQHAKAAHYLTRTLEILTGDQALRRRPKFVDTDYLLAALFVLVVVWIAKG
Ga0318541_105989782	3300031545	Soil	MTRIMRSWRKANAYVQSGQHAKAAHWLIRTLEILDGDQALRRRSRYMDTDYLLAALFVLVVVWIAKG
Ga0318541_107447201	3300031545	Soil	RQANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDTDYLLAALFISVVVWIAIAKFLPST
Ga0318573_102518891	3300031564	Soil	MRHDKNDACLAHAYVRSGHHARAAYWLSRTLAILDGNRAPQRRTKYIDADYLLAAL
Ga0318555_103036781	3300031640	Soil	MTRMMRSWRKANAYVQSGQHAKAAHWLIRTLEILDGDQALRHRSRYMDTDYLLAALFVLVVVWIAKG
Ga0318555_104764761	3300031640	Soil	MTRMMCAWRQANAYMRSGEHAKAVYWLSRTLAILDNERPRRHRLAGMDTDYLLAALFISVVVWIAIAKFLPSTWPV
Ga0318561_104935451	3300031679	Soil	MTRMMCAWRQANAYMRSGEHAKAVYWLSRTLAILDNERPRRHRLAGMDTDYLLAALFISVVVWIA
Ga0318572_102894131	3300031681	Soil	MRHDKNDACLAHAYVRSGHHARAAYWLSRTLAILDGNRAPQRRTKYIDADYLLAALFMLVVILIAKG
Ga0306917_100513144	3300031719	Soil	MTRMMRAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDTDYLLAVLFISVVVW
Ga0318501_102376473	3300031736	Soil	MTRIMRSCRKAKVYVQSGQHAKAAHWLIRTLEILDGDQALRRRSRYMDTDYLLAALFVLVVVWIAKG
Ga0318501_104081242	3300031736	Soil	MTRMMCAWRQANAYMRSGEHAKAVYWLSRTLAILDNERPRRHRLAGMDTDYLLAALFISVVVWIAIAKFLPST
Ga0318509_107920872	3300031768	Soil	MTRMMRAWRRANAHMRSGEHAKAVYWLSRTLAILDNERPRRRRLEGMDIDYLLAAL
Ga0318546_102765372	3300031771	Soil	MTRTMRAWRKANAYVRSGHHAKAAYWLSRTLAILDGNRSPRRRTKYIDADYLLAALFMLVVVLIAKG
Ga0318546_111122792	3300031771	Soil	MTRMMCAWRQANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDIDYLLAALFISVVVWIAIAKFLPLT
Ga0318546_111240642	3300031771	Soil	MCVWECAMTRMMRAWRKANAHMRSGEHAKAVYWLSRTLAILDNERPRRRRLEGMDIDYLLAALFVLVVVWIAKG
Ga0318557_105686422	3300031795	Soil	MTRMMCAWRQANAYMRSGEHAKAVYWLSRTLAILDNERPRRHRLAGMDTDYLLAALFISVVVGIAIAKFLPST
Ga0318576_104003541	3300031796	Soil	DKNDACLAHAYVRSGHHARAAYWLSRTLAILDGNRAPQRRTKYIDADYLLAALFMLVVILIAKG
Ga0318499_104343202	3300031832	Soil	MTRMMRAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEVMDTDYLLAALFISVVVGIAIAKFLPST
Ga0306919_101003252	3300031879	Soil	MTRTMRAWRKANAYVRSGHHAKAAYWLSRTLAMLDGNRSPRRRTKYIDADYLLAALFMLVVVLIAKG
Ga0306919_101188113	3300031879	Soil	MTRMMRAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDTDYLLAVLFISVVVWIAKA
Ga0306919_101572342	3300031879	Soil	MTRMMRAWRRANAHMRSGEHAKAVYWLSRTLAILDNERPRRRRLEGMDIDYLLAALFVLVVVWIAKG
Ga0306919_104713392	3300031879	Soil	MTRIMRSWRKANAYVQSGQHAKAAHWLIRTLEILDGDQALRHRSRYMDTDYLLAALFVLVVVWIAKG
Ga0318544_100670882	3300031880	Soil	MTRMTCAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEVMDTDYLLAALFISVVVWIAIAKFLPST
Ga0306925_104077363	3300031890	Soil	MTRMMCAWRQANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDTDYLLAALFISVVVWIAIAKFLPST
Ga0306923_122111261	3300031910	Soil	MTKMMRSWRKANAYVRSGQHAKAAHYLTRTLEILTGDQALRRRPKYMDTDYLLAALFVLVVVWI
Ga0306921_101147722	3300031912	Soil	MTRMMRAWRKANAYMRSGEHAKAIYWLSRTLAILDNELPRRRRLEGMDTDYLLAVLFISVVVWIAKA
Ga0306921_122743591	3300031912	Soil	DSMCVWECAMTRMMRAWRKANAHMRSGEHAKAVYWLSRTLAILDNERPRRGRVEGMDIDYLLAALFISVVVWIAKG
Ga0310910_105847481	3300031946	Soil	MTRMMRSWRKANAYVQSGQHAKAAHWLIRTLEILDGDQALRRRSRYMDTDYLLAALFVLVVVWIAKG
Ga0310909_106582701	3300031947	Soil	NDACLAHAYVRSGHHARAAYWLSRTLAILDGNRAPQRRTKYIDADYLLAALFMLVVILIAKG
Ga0306926_120475262	3300031954	Soil	MCVWECAMTRMMRAWRKANAHMRSGEHAKAVYWLSRTLAILDNERPRRGRVEGMDIDYLLAALFISVVVWIAKG
Ga0318530_100706571	3300031959	Soil	MTRMTCAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEVMDTDYLLAALFISVVVGIA
Ga0318531_102733042	3300031981	Soil	MTRMTCAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEVMDTDYLLAALFI
Ga0306922_100064619	3300032001	Soil	MTRMMCAWRQANAYMRSGEHAKAVYWLSRTLAILDNERPRRHRLAGMDTDYLLAALFISVVVWIAIVKFLPS
Ga0306922_101358561	3300032001	Soil	MTRTMRAWRKANAYVRSGNHAKAAYWLSRTLAMLDGNRSPRRRTKYIDADYLLAALFMLVVVLIAKG
Ga0306922_107254392	3300032001	Soil	CGMTRMMRAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDTDYLLAVLFISVVVWIAKA
Ga0306922_119962062	3300032001	Soil	MTRMMCAWRQANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDIDYLLAALFISV
Ga0318506_101266261	3300032052	Soil	MTRIMRSWRKANAYVQSGQHAKAAHWLIRTLEILDGDQALRRRSRYMDTDYLLAALFVLVVVW
Ga0318533_111305191	3300032059	Soil	KANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDTDYLLAVLFISVVVWIAKA
Ga0306924_100469147	3300032076	Soil	MTRMMCAWRQANAYMRSGEHAKAVYWLSRTLAILDNERPRRHRLAGMDTDYLLAALFISVVVWIAIAKFLPLT
Ga0307471_1039158851	3300032180	Hardwood Forest Soil	MTRMMRAWRKANAYVRSGQHAKAIYWLSRTQAIVDGGQPRQRRLEGMDTIGYMLAALFVLVVVWIAKG
Ga0306920_1007826442	3300032261	Soil	MTRIMRSWRKANAYVQSGQHAKAAHWLIRTLEILDGDQALRRRSRYMDTDYLLA
Ga0306920_1012836043	3300032261	Soil	MTKMMRSWRKANAYVRSGQHAKAAHYLTRTLEILTGDQALRRRPKYMDTDYLLAALFVLVVVWIAKG
Ga0306920_1030778911	3300032261	Soil	CAWRQANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDIDYLLAALFISVVVWIAIAKFLPLT
Ga0306920_1038423571	3300032261	Soil	MTRIMRSWRKANAYVQSGQHAKAAYWLIRTLEILDGDQALRRRSRYMDTDYLLAALFVLVVVWIAKG
Ga0310914_101051874	3300033289	Soil	MTRMTCAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEVMDTDYLLAAQFISVVVGIAIAKFLPST
Ga0310914_101491572	3300033289	Soil	MTRMMRAWRKANAYMRSGEHAKAIYWLSRTLAILDNERPRRRRLEGMDTDYLLAVLFISVVVWIAKG
Ga0310914_106145491	3300033289	Soil	MRHDKNDACLAHAYVRSGHHARAAYWLSRTLAILDGNRAPQRRTKYIDADYLLAALFMLVVILIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079834

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences