Metagenome / Metatranscriptome Family F079887

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079887
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	102 residues
Representative Sequence	MERSRLRKPSLSQSEDARPGDPAFLAPAANGTPPERKHPIPKHAQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHHESP
Number of Associated Samples	103
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.30 %
% of genes near scaffold ends (potentially truncated)	46.09 %
% of genes from short scaffolds (< 2000 bps)	79.13 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.391 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.130 % of family members)
Environment Ontology (ENVO)	Unclassified (22.609 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.174 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.91% β-sheet: 0.00% Coil/Unstructured: 84.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00078	RVT_1	6.96
PF13570	PQQ_3	1.74
PF08388	GIIM	1.74
PF00239	Resolvase	1.74
PF00704	Glyco_hydro_18	0.87
PF13592	HTH_33	0.87
PF04542	Sigma70_r2	0.87
PF03050	DDE_Tnp_IS66	0.87
PF15631	Imm-NTF2-2	0.87
PF04972	BON	0.87
PF14106	DUF4279	0.87
PF13551	HTH_29	0.87
PF07589	PEP-CTERM	0.87
PF14499	DUF4437	0.87
PF07676	PD40	0.87
PF14534	DUF4440	0.87
PF02517	Rce1-like	0.87
PF13751	DDE_Tnp_1_6	0.87
PF13649	Methyltransf_25	0.87
PF06739	SBBP	0.87
PF08447	PAS_3	0.87
PF04185	Phosphoesterase	0.87
PF07366	SnoaL	0.87
PF12973	Cupin_7	0.87
PF02558	ApbA	0.87
PF01844	HNH	0.87
PF11954	DUF3471	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.74
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.74
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.87
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.87
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.87
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.87
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.87
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.87
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Unclassified	root	N/A	2.61 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	53.04 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.61 %
Unclassified	root	N/A	2.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.04 %
Unclassified	root	N/A	2.61 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.87 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.04 %
Unclassified	root	N/A	2.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.87 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.04 %
Unclassified	root	N/A	2.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.87 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.87 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.87 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.04 %
Unclassified	root	N/A	2.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.87 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.87 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	0.87 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.04 %
Unclassified	root	N/A	2.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
unclassified Zavarzinella	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella	0.87 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.87 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.87 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.04 %
Unclassified	root	N/A	2.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Zavarzinella sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	0.87 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.87 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.87 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000893\|AP72_2010_repI_A001DRAFT_1078090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300003505\|JGIcombinedJ51221_10046822	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300004157\|Ga0062590_101256281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300004157\|Ga0062590_102951310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300004631\|Ga0058899_10195007	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005171\|Ga0066677_10795615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300005174\|Ga0066680_10054078	All Organisms → cellular organisms → Bacteria	2364	Open in IMG/M
3300005176\|Ga0066679_10545357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300005176\|Ga0066679_10733091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300005177\|Ga0066690_10358874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300005177\|Ga0066690_10990295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300005178\|Ga0066688_10246857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1142	Open in IMG/M
3300005178\|Ga0066688_10441173	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005434\|Ga0070709_10831297	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300005440\|Ga0070705_101804804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300005445\|Ga0070708_101011209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300005451\|Ga0066681_10825376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300005540\|Ga0066697_10200363	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300005540\|Ga0066697_10577639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300005546\|Ga0070696_100950069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300005555\|Ga0066692_10246866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300005555\|Ga0066692_10320375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300005558\|Ga0066698_10472376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300005576\|Ga0066708_10048163	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300005617\|Ga0068859_101450693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300005993\|Ga0080027_10209731	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005995\|Ga0066790_10279559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300006028\|Ga0070717_10104576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	2408	Open in IMG/M
3300006162\|Ga0075030_100113610	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300006791\|Ga0066653_10515967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300006794\|Ga0066658_10219310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300006797\|Ga0066659_10196782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1472	Open in IMG/M
3300006797\|Ga0066659_10672184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300006852\|Ga0075433_10677735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300006871\|Ga0075434_101144979	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300006893\|Ga0073928_10062686	All Organisms → cellular organisms → Bacteria	3274	Open in IMG/M
3300007076\|Ga0075435_100291469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1394	Open in IMG/M
3300009088\|Ga0099830_11342595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300009089\|Ga0099828_11662469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300009143\|Ga0099792_10427544	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300009162\|Ga0075423_11428978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300009700\|Ga0116217_10379165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300009792\|Ga0126374_10389715	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300009839\|Ga0116223_10315734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300010048\|Ga0126373_11995127	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300010323\|Ga0134086_10451589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300010343\|Ga0074044_10064814	All Organisms → cellular organisms → Bacteria → Acidobacteria	2481	Open in IMG/M
3300010359\|Ga0126376_10027758	Not Available	3785	Open in IMG/M
3300010359\|Ga0126376_11283352	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300010371\|Ga0134125_12759080	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010375\|Ga0105239_12347722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300011110\|Ga0138578_1109840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300011270\|Ga0137391_10059733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3264	Open in IMG/M
3300011270\|Ga0137391_10127725	All Organisms → cellular organisms → Bacteria	2209	Open in IMG/M
3300012096\|Ga0137389_10253465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1480	Open in IMG/M
3300012096\|Ga0137389_11791138	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300012189\|Ga0137388_10118082	Not Available	2306	Open in IMG/M
3300012198\|Ga0137364_10798734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300012205\|Ga0137362_10410094	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300012206\|Ga0137380_11222160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300012209\|Ga0137379_11087273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300012210\|Ga0137378_11792931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012357\|Ga0137384_10543904	Not Available	951	Open in IMG/M
3300012362\|Ga0137361_10016377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5507	Open in IMG/M
3300012975\|Ga0134110_10487697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300013105\|Ga0157369_11939572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300014491\|Ga0182014_10058374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2580	Open in IMG/M
3300015241\|Ga0137418_10151737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2041	Open in IMG/M
3300015371\|Ga0132258_12266682	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300017925\|Ga0187856_1034747	All Organisms → cellular organisms → Bacteria	2352	Open in IMG/M
3300017934\|Ga0187803_10442357	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300017936\|Ga0187821_10500306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300018017\|Ga0187872_10044925	All Organisms → cellular organisms → Bacteria → Acidobacteria	2391	Open in IMG/M
3300018431\|Ga0066655_10430476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300018468\|Ga0066662_12606307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300019885\|Ga0193747_1045596	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300020012\|Ga0193732_1001548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4151	Open in IMG/M
3300020018\|Ga0193721_1020687	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300020581\|Ga0210399_10523576	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300020582\|Ga0210395_10431743	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300021088\|Ga0210404_10052674	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300021088\|Ga0210404_10084483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1570	Open in IMG/M
3300021403\|Ga0210397_10444170	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300021404\|Ga0210389_10211635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1513	Open in IMG/M
3300023090\|Ga0224558_1003972	All Organisms → cellular organisms → Bacteria → Acidobacteria	11857	Open in IMG/M
3300023090\|Ga0224558_1004930	All Organisms → cellular organisms → Bacteria → Acidobacteria	10067	Open in IMG/M
3300023101\|Ga0224557_1024214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3205	Open in IMG/M
3300025898\|Ga0207692_10358822	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	900	Open in IMG/M
3300025910\|Ga0207684_10002631	All Organisms → cellular organisms → Bacteria	17962	Open in IMG/M
3300025922\|Ga0207646_11445904	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300025935\|Ga0207709_11158929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300025941\|Ga0207711_10775373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300025986\|Ga0207658_11134669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300026281\|Ga0209863_10156609	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300026325\|Ga0209152_10269189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300026482\|Ga0257172_1100783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300026532\|Ga0209160_1163011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300026538\|Ga0209056_10564618	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300027073\|Ga0208366_1000173	All Organisms → cellular organisms → Bacteria → Proteobacteria	3277	Open in IMG/M
3300027173\|Ga0208097_1040121	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300027748\|Ga0209689_1106161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1438	Open in IMG/M
3300027853\|Ga0209274_10697356	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300028047\|Ga0209526_10052894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2860	Open in IMG/M
3300030707\|Ga0310038_10238504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300030991\|Ga0073994_10075469	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300031018\|Ga0265773_1007451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300031128\|Ga0170823_15909022	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300031231\|Ga0170824_100304985	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300031234\|Ga0302325_11409057	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	906	Open in IMG/M
3300031474\|Ga0170818_113205446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300031718\|Ga0307474_11598772	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031820\|Ga0307473_10728581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300031962\|Ga0307479_10032437	All Organisms → cellular organisms → Bacteria	4982	Open in IMG/M
3300031996\|Ga0308176_11937057	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300032180\|Ga0307471_100900173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.43%
Host-Associated	Host-Associated	9.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.22%
Plants	Host-Associated → Plants	9.57%
Aquatic	Environmental → Aquatic	5.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.83%
Freshwater	Environmental → Aquatic → Freshwater	3.48%
Peat	Environmental → Terrestrial → Peat	3.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.87%
Sediment	Environmental → Aquatic → Sediment	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.35%
Loam	Environmental → Terrestrial → Soil → Loam	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.48%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.22%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.74%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.48%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.74%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.74%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.87%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.87%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.87%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011110	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A001DRAFT_10780901	3300000893	Forest Soil	MKGARLRKPTLSQCEDARPRDPVFLAPAAKSTPPMRQHPIPKHPQTLEVSWDRVIVEVALDDRLEPSSGSGHGIVHALVKLPLNLSQFAPHALADRRAPYHEAS*
JGIcombinedJ51221_100468222	3300003505	Forest Soil	MSGGEANIRKGMKRMRLRKPSRSQDKDACPVDPVLLAPAAKSKPPEREHPIPKHAQAREVPGDRIVVEVALHDRLEPLAGLAHGIVHPLTELLFNLS*
Ga0062590_1012562811	3300004157	Soil	MERSRLRKPSLSQNEDARPGDPAFLASTASGTPPECKHPIPKHTQTREVSRHRVVVEVALDDRLEPLSGLGHGIVHALTQLLLNLSQPGSHALADRRAPHHESP*
Ga0062590_1029513101	3300004157	Soil	MKRARLRKPTLSQCEDARPRDPVFLAAAAKSTPPQRQHPIPKHPQTLEVSWDRVIVEVALDDRLEPLSGLGHGIVHALAKLLLEFSKLGSHALADRRAPYHEAS*
Ga0058899_101950071	3300004631	Forest Soil	MSGGEANIRKGMERTRLRKPSRSQDKHACPVDPALLASAANSTPPEREHPIPKHAQAREVPWYRVVVEVALHDRLEPLAGLAHGIVHPLAELLLNLSQLH
Ga0066677_107956151	3300005171	Soil	MERSRLRNPSLSQNEDARPGDPAFLAPTANDTPPERKHPIPNHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLS
Ga0066680_100540781	3300005174	Soil	MERSRLRKPSLSQNEDARPGDPVFLAPTANGTPPECKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHAL
Ga0066679_105453571	3300005176	Soil	MERSRLGKPALSQNEDACPGDPAFLASTANGTPPERKHPIPKHTQTREVSRYRVVVEEALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHHESP*
Ga0066679_107330911	3300005176	Soil	MERTRLREPSLGQHESARPVDPVFLAPSANGTPPESKHPIAEHSQTREVSRYRVVVEVALDDRLEPLSGLGHGIVHALTELLLNLSQLGSHALADRRAPHHESP*
Ga0066690_103588741	3300005177	Soil	MERSRLRKPSLSQNEDARPGDPVFLAPTANGTPPECKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRG
Ga0066690_109902951	3300005177	Soil	MERSRLGKPALSQNEDACPGDPAFLASTANGTPPERKHPIPKHTQTREVSRYRVVVEEALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRG
Ga0066688_102468571	3300005178	Soil	MERSRLRKPSLSQNEDARPGDPVFLAPTANGTPPECKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLN
Ga0066688_104411732	3300005178	Soil	MERSRLRNPSLSQNEDARPGDPAFLAPTANGTPPERKHPIPKHTQTREVSRYRVVVEVYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAP
Ga0070709_108312971	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MERTRLRKPSLSQSESACPGDPAFLAPATNSSPPERDHPVPKHSLTLKVSWYRVVVEVALHDRLEPSSGLGHGIMHTLAELLLNLSQFGSHAFADRGAPHHESP*
Ga0070705_1018048042	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MERTRLRKPSRSQDKDARPVDPVLLAAAAKSTPPEREHPIPKHAQTREVAGDRIVVEVTLHDRLEPSAGLAHGIVHPLTELLLNLSQLRPHAFANRLAPHHESP*
Ga0070708_1010112091	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	WGKPSLSQYKEARPVDPVFLAPSANGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPLSGLGHGIVHALTELLLNLSQLGSHALANRRAPHHESP*
Ga0066681_108253761	3300005451	Soil	MSGGEASVRKGMERTRLGKPLLSQYKDARPVDPVFLAPAANGTPPESKHPIAEHAQTLEVSRYRVVVEVALDDRLEPLSGLGHGIVHALTELLLNLSQLGSHALADR
Ga0066697_102003631	3300005540	Soil	MERSRLRKPSLSQNEDARSGDPAFLAPTANDTPPERKHPIPNHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALA
Ga0066697_105776391	3300005540	Soil	MERSRLRKPALSQNEDARPGVPVFVTPTANGTPPECKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALA
Ga0070696_1009500691	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MERTRLRKPSLSQSESACPGDPAFLAPATNSSPPERDHPVPKHSLTLKVSWYRVVVEVALHDRLEPSSGLGHGIMHTLAELLLNFSQFGSHAFADRLAPYRKPP*
Ga0066692_102468661	3300005555	Soil	MERSRLRKPSLSQSEDARPGDPAFLAPAANGTPPERKHPIPKHAQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHHESP*
Ga0066692_103203751	3300005555	Soil	MERSRLRKPSLSQNEDARPGDPVFLAPTANGTPPECKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHHESP*
Ga0066698_104723762	3300005558	Soil	MERSRLRNPSLSQNEDARPGDPAFLAPTANDTPPERKHPIPNHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPDHESP*
Ga0066708_100481635	3300005576	Soil	MERSRLRNPSLSQNEDARPGDPAFLAPTANGTPPERKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHHESP*
Ga0068859_1014506932	3300005617	Switchgrass Rhizosphere	MERTRLRDPSLGQHENARPVDPVFLAPSANGTPPESQHPIAEHSQTREVSRYRVVVEVALDDRLEPLSGLGHGIVHALTQLLLNLSQPGSHALADRRAPHHESP*
Ga0080027_102097312	3300005993	Prmafrost Soil	MERSRLRKPSLSQNEDPRPGEPAFLAPAAKDTPPEHKHPIRKHTQTREVSRYRVVVVVALYDRLEPSAGVEHGIVHALVELLLNLSQLGSHALSDRGAPHHESPLIHSSR*
Ga0066790_102795591	3300005995	Soil	MERLRLRKPSLSQYKEACPVDPVFLAPSANGTPPESKHPIAEHAQTLEVPRYRVVVEVASDDRLEPLSSLGHGIVHTLTQLLLDLSQ
Ga0070717_101045766	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MERARLGKPSLSQYKEARPVDPVFLAPSANGTPPESKHSIAEHAQTREVSRYRVVVEVALDDRLEPLSGLGHGIVHALAQLLLNLSQLGSHALADRRAPHHESP*
Ga0075030_1001136101	3300006162	Watersheds	MERTRLRKPSRSQYKGARPVDPALLAPAAKSTPTVHQHPIPKHAQTREVPWYRVVVEVALHDRLEPLAGLAHGIVHPLTELLLNLSQLRPHAFANRLAPHHESP*
Ga0066653_105159671	3300006791	Soil	MDRSRLRNPSLSQNEDARPGDPAFLAPTANGTPPERKHPIPKHTQTREVSWYRIVVEVALYDRLEPLSGLWHGIVHALAELLLNLSQLGSHALADSGAPHHESP*
Ga0066658_102193101	3300006794	Soil	MERSRLRNPSLSQNEDARPGDPVFLAPTANGTPPECKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQ
Ga0066659_101967821	3300006797	Soil	MERSRLRKPALSQNEDARPGVPVFVTPTANGTPPECKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLN
Ga0066659_106721842	3300006797	Soil	MERSRLRNPSLSQNEDARPGEPVFLAPTANGTPPERKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALSDRGAPHHESP*
Ga0075433_106777352	3300006852	Populus Rhizosphere	MERSRLRKPSLSQSKDARPGDWAFLAPMAKSSPPERKHPIPKHAQAREISRYRVVVEVALYDRLEPLSGLEHGIVHALAELLLNLSQLGSHALADRGAPHHS*
Ga0075434_1011449791	3300006871	Populus Rhizosphere	MERTRLRKPSLSQSESACPGDPAFLAPATNSSPPERDHPVPKHSLTLKVSWYRVVVEVALHDRLEPSSGLGHGIMHTLAELLLNFSQFGSHAFADRGAPH
Ga0073928_100626861	3300006893	Iron-Sulfur Acid Spring	MESARLRKPSRSQHKGTCPVDPVLLAPAAKSTPPVREHPIPKHAQTREVPWYRVVVEVALHDRLEPLAGLAHGIVHPLTELLLNFSQL
Ga0075435_1002914692	3300007076	Populus Rhizosphere	MERSRLRKPSLSQSKDARPGDWAFLAPTAKSSPPERKHPIPKHAQTREISRYRVVVEVALYDRLEPLSGLEHGIVHALAELLLNLSQLGSHALADRGAPHHS*
Ga0099830_113425951	3300009088	Vadose Zone Soil	MERTRLREPSLSQYKEARPVDPVSLAPSANGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPRSGLGHGIVHALTELLLNLSQLGSHALADRRAPHHESP*
Ga0099828_116624691	3300009089	Vadose Zone Soil	MSGGEASIRKGMERSRLGKPSLSQYKEARPVDPVFLAPSANGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPRSGLGHGIVHALTELLLNLSQLGSHALANRRAPHHESP*
Ga0099792_104275441	3300009143	Vadose Zone Soil	MSGGEASVRKGMERTRLGEPAVSQYKKARPVDSVFVAPATNGTPPESKHPIAKHAQTLEVSRYRVVVEVALDDRMEPLSGLGHGIVHALMELLLNLSQLGSHALADCR
Ga0075423_114289781	3300009162	Populus Rhizosphere	MTGGKASIRKGMERSRLRKPSLSQSKDARPGDWAFLAPMAKSSPPERKHPIPKHAQAREISRYRVVVEVALYDRLEPLSGLEHGIVHALAELLLNLSQLGSHALADRGAPHHS*
Ga0116217_103791651	3300009700	Peatlands Soil	MSGGEASIRKGMERTRWGKPSLSQYKEARPVDPVFLAPSANGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPLSDWGHGIVPALTESLLNLSQLGSQALADRRAPHHESP*
Ga0126374_103897151	3300009792	Tropical Forest Soil	MNGSKACIRKGMKRARWRKPTLSQCEDARPRDPVFLAPAAKSTPPKRQHPIPKHPQTLEVSWDRVIVEVALDDRLEPSSGSGHGIVHALMKLLLNLSQFAPHALADRRAPYHEAS
Ga0116223_103157341	3300009839	Peatlands Soil	KPSLSQYKEARPVDPVFLAPSANGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPLSGWGHGIVPALTESLLNLSQLGSQALADRRAPHHESP*
Ga0126373_119951271	3300010048	Tropical Forest Soil	MGGGEASIRKGMKRTRLRKPRLSQCENARPRDPTFLTAATKSTPPQRQHPIPKHSQTLEVSWYRVVVEVAVDDRLEPLSGSGHGIVHALAKLLLNLSQFAPHAL
Ga0134086_104515891	3300010323	Grasslands Soil	MTGGKASIRKGMERSRLRKPALSQNEDARPGVPVFVTPTANGTPPECKHPIPKHTQTREVSWYRIVVEVALYDRLEPLSSLGHGIVHALAELLLNLSQ
Ga0074044_100648145	3300010343	Bog Forest Soil	MSSGKASVGERMERTRLRKPSRSQYEGACPVDPVLLAPAAKSTPPECDHPIPKHAQALEIAGDRIVVEVALHDRLEPLAGLAHGIVHPLTELLLSLSQLRPHAFANRLASHHESP*
Ga0126376_100277584	3300010359	Tropical Forest Soil	MGGGEASIRKGMKRTRLRKPRLSQCENARPRDPTFLTAATKSTPPQRQHPIPKHSQTLEVSWYRVVVEVAVDDRLEPLSGSGHGIVHALAKLLLNLSQFAPHPLADRRAPYHEAP*
Ga0126376_112833521	3300010359	Tropical Forest Soil	MNGGKAGIRKGMKRARLRKPTLSQCEDARPRDPVFLAPAAKSTPPKRQHPIPKHPQTLEVSWDRVIVEVALDDRLEPSSGSGHGIVHALMKLLLNLSQFAPHALAD
Ga0134125_127590801	3300010371	Terrestrial Soil	MERTRLRKPSLSQSESACPGDPAFLAPATNSSPPERDHPVPKHSLTLKVSWYRVVVEVALHDRLEPSSGLGHGIMHTLAELLLNFSQFGSHAFAD
Ga0105239_123477221	3300010375	Corn Rhizosphere	MERSRLRKPSLSQNEDARPGDPAFLASTASGTPPECKHPIPKHTQTREVSRRRVVVEVALDDRREPLSGLGHGIVHALTRLLLNLSQLGSHALADR
Ga0138578_11098401	3300011110	Peatlands Soil	MSGGEASVVEGMERARLRKPSLSQYKDARPVDPAFLAPSANGTPPKRKHPIPKHTQTREVSRYRVVVEVTLYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRRAPHHESP*
Ga0137391_100597331	3300011270	Vadose Zone Soil	MMSGEAGVRKGMEHSWLRNPSLSQIEDARPRDPAFLAPSAKSSPPERKHPIPKHAQTREVSWYRVVVEVALHDRLEPLSGLGHGIVHALAELLLNLSQLGSHALAHRGAPHQESP*
Ga0137391_101277251	3300011270	Vadose Zone Soil	MSGGEASVRKGMERSRLRNPSLSQLEDARPRDPAFLAPAAKSAPPERKHPIPKHPQTRQVSWYRVVVEVALHDRLEPSTGLGHGIVHALAELLLNLSQLSSHALADRGAPHHES
Ga0137389_102534651	3300012096	Vadose Zone Soil	MSGGEASIRKGMERSRLGKPSLSQYKEARPVDSVFVAPATNGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPRSGLGHGIVHALTELLLNLSQLGSHALANRRAPHHESP*
Ga0137389_117911381	3300012096	Vadose Zone Soil	MSGGEANIRKGMERTRLRKPSRSQDKDARPVDPVLLAPAAKSTPPEREHPIPKHAQTREVAGDRIVVEVALHDRFEPLAGLAHGIVHPLTELLLNFSQLSPHAFANRLAPHHESP*
Ga0137388_101180822	3300012189	Vadose Zone Soil	MTGGKASIRKGMERSRLRKPSLSQTEDARPVDPAFLAPAAKSTPPERKHPIPKHTQTREVSRYRVVVEVALYDRLEPSSGLGHGIVHALAELLPNLSQLGSHALADRGAPHHESP*
Ga0137364_107987341	3300012198	Vadose Zone Soil	MERSRLRKPALSQNEDARPGVPVFVTPTANGTPPECKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHHESP*
Ga0137362_104100942	3300012205	Vadose Zone Soil	MSGGEASIRKGMERSRLRKPSLSQYKEARPVDPVFLAPPANGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPRSGLGHGIVHALTELLLNLSQLGSHALA
Ga0137380_112221602	3300012206	Vadose Zone Soil	MSGGEASVRKGMERSRLRKPSLSQYKEARPVDPAFLAPSANGTPPESKHPIAEHSQTREVSRYRVVVEVALDDRLEPLSGLGHGIVHALTQLLL
Ga0137379_110872732	3300012209	Vadose Zone Soil	MTGGKASIRKGMECSRLRKPSLSQNEDARPGDPAFLAPTANGTPPERKHPIPKHTQTRQVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALA
Ga0137378_117929311	3300012210	Vadose Zone Soil	MTGGKASIRKGMECSRLRKPSLSQNEDARPGDPAFLAPTANGTPPERKHPIPKHTQTRQVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHAL
Ga0137384_105439042	3300012357	Vadose Zone Soil	MTGGKASVRKGMERSRLRKPSLSQNEDARPGNSAFLAPAAKVTPPERKHPIPKHTQTREVSRYRVVVEVALYHRLEPSAGLGDGIVHALTELLLNLSQLGSHTLSDRGAPHHESP*
Ga0137361_100163775	3300012362	Vadose Zone Soil	MSGGEASIRKGMERSRLGKPSLSQYKEARPVDPVFLAPSANGTPPESKHPIAEHAQTREVSRYRVAVEVALDDRLEPRSGLGHGIVHALTELLLNLSQLGSHALANRRAPHHESP*
Ga0134110_104876971	3300012975	Grasslands Soil	MTGGKASVRKGMERSRLRNPSLSQNEDARPGDPAFLAPTANDTPPERKHPIPNHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAEMLLNLSQLGS
Ga0157369_119395721	3300013105	Corn Rhizosphere	MERSRLRKPSLSQNEDARPGDPAFLASTASGTPPECKHPIPKHTQTREVSRYRVVVEVAPHDRLEPPSRLSYGIMHASMKLLLKLPQFAPHALADRFASHGEAPQTILPANVRES*
Ga0182014_100583741	3300014491	Bog	MERSRLRKPSLSDNESARPGVSAFLAPAANSPPPEREHPIPEHSQTREVSWYRVVVEVALHDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHHESP*
Ga0137418_101517371	3300015241	Vadose Zone Soil	MSGGEASVRKGMERSRLGKPSLSQYKEARPVDPVFLAPSAKGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPLSGLGHGIVHALAQLLLNLSQLGSHALADRRAPHHESP*
Ga0132258_122666821	3300015371	Arabidopsis Rhizosphere	MERTWLRKPSLSPSESACPGDPVFLAPATNSSPPERDHPVPKHSQTLEVSRYRVVVEVAWHDRLEPSSGLGHGIMHTLAEMLLN
Ga0187856_10347472	3300017925	Peatland	MERSRLRKPSLSQSESARPGNRVFLTPAANSTPPERDHPIPEHSQTREVSWYRVVVEVALHDRLKPLSGLGHGIVHALAELLLHLSQFGSHALADRGAPHHESP
Ga0187803_104423571	3300017934	Freshwater Sediment	MERTRLREPSLGQHESARPVDPVFLAPSANGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPLSGLGHGIVHALTELLLNLSQLGSHALADRRAPH
Ga0187821_105003061	3300017936	Freshwater Sediment	MERSRLGKPALSQNEDARPVDPAFLASTANGTPPERNHPIPKRTQTREVSRYRVVVEVALYDRPEPRSGLGHGIVHAHAELLLNLSQLGSHALADR
Ga0187872_100449254	3300018017	Peatland	MERTRLRKPSLSQSESACPRDPAFLAPTTNSSPPVRDHPIPKHSQAREVSWYRVVVEVALHDRLEPASGLGHGIMHTFAKLLLNLSQFGSHAFADRGAPHQESP
Ga0066655_104304762	3300018431	Grasslands Soil	MERSRLRKPALSQNEDARPGVPVFVTPTANGTPPECKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHHESP
Ga0066662_126063071	3300018468	Grasslands Soil	MERSRLRKPSLSQNEDARPGDPVFLAPTANGTPPECKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGA
Ga0193747_10455962	3300019885	Soil	MERTRLRKPWLSQSESACPGDSAFLAPATNGSPPVRDHPIPEHSQTLEVSWYRVVTEVALHDRLEPSSGLGHGIVHPLAELLLNPSAWSDYKREANQ
Ga0193732_10015483	3300020012	Soil	MERSRLREPSLSQSEDARPGDPAFLAPTANGMPPERKHPIPKHTQTREVSRYRVVVEVALHDRLEPLSGLGHGIVHALAELLLNLSQLGPHALADRGAPHHESP
Ga0193721_10206871	3300020018	Soil	MERSRLRNPSLSQNEDARPGDPAFLAPTANGTPPERKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLN
Ga0210399_105235761	3300020581	Soil	MERTRLRKPALSQSESACPGDPAFLAPATNSSPPERDHPVPKHSQTLEVSWYRVVVEVALHDRLEPSSGLGHGIMHTLAELLLNLSQFGSHAFADRRAPH
Ga0210395_104317433	3300020582	Soil	MSGGEANIRKGMKRMRLRKPSRSQDKDACPVDPVLLAPAAKSKPPEREHPIPKHAQAREVPGDRIVVEVALHDRLEPLAGLAHGIVHPLTELLFNLS
Ga0210404_100526741	3300021088	Soil	MERTRLREPSLGQHESARPVDPVFLAPSANGTPPESQHPIAEHSQTREVSRYRVVVEVALDDRLEPLSGLGHGFVHALAELLLNLSQLGSHALADRGAPHHESP
Ga0210404_100844833	3300021088	Soil	MERSRLGKPSLSQYKEARPVDPVFLAPSANGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPLSGLGHGIVHALTELLLDLSQLGSH
Ga0210397_104441701	3300021403	Soil	RKGMKRMRLRKPSRSQDKDACPVDPVLLAPAAKSKPPEREHPIPKHAQAREVPGDRIVVEVALHDRLEPLAGLAHGIVHPLTELLFNLS
Ga0210389_102116352	3300021404	Soil	MERTRRRKPSLSHSESACPGDPALLTPASNSSPPERDHPIPKHSQAFEVSWYRVVVEVALHDRLEPSSGLGHGIMHTLAELLLNLSQFGAHAFADRNAPHHESP
Ga0224558_10039721	3300023090	Soil	MERSRLRKPSLSDNESARPGVSAFLAPAANSPPPEREHPIPEHSQTREVSWYRLVVEVALHDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHHESP
Ga0224558_100493010	3300023090	Soil	MERSRSRKPSLSQNEDARPGDPTFLAPTANSTPPEREHPVPKYTQTREVSRYRVVVEVALYDRLAPLSGLGHGIVHALAELLLNLSQLDSHALADRGAPHHPAHKYRLYTNNRLA
Ga0224557_10242143	3300023101	Soil	MELARLRKPSLSQNEDARPWDTAFLAPATNSSPPERQHPIPKHPQTGEVARYRVVVEVALHDRLEPLSGLGHGIMHALAELLLHLSQLGSHALADRGAPHHESP
Ga0207692_103588221	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MERTWLRKPSLSPSESACPGDPVFLAPATNSSPPERDHPVPKHSQTLEVSRYRVVVEVAWHDRLEPSSGLGHGIMHTLAEMLLNLSQFGSHAFADRGTPHHESP
Ga0207684_100026312	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MERSRLGKPSLSQYKEARPVDPVFLAPSANGTPPESKHPIAEHAQTREVSRYRVVVEVALGDRLEPRSGLGHGIVHALTELLLNLSQLGSHALANRRAPHHESP
Ga0207646_114459041	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FLSRMSSGEANIRKGMERTRLRKPSRSQDKDARPVDPVLLALAAKSTPPEREHPIPKHAQTREVAGDRIVVEVTLHDRLEPSAGLEIASLPLSARLMS
Ga0207709_111589291	3300025935	Miscanthus Rhizosphere	MERSRLRKPSLSQNEDARPGDPAFLASTASGTPPECKHPIPKHTQTREVSRHRVVVEVALDDRLEPLSGLGHGIVHALTQLLLNLSQLGSHALADRRAPH
Ga0207711_107753732	3300025941	Switchgrass Rhizosphere	MERSRLRKPSLSQNEDARPGDPAFLASTASGTPPECKHPIPKHTQTREVSRHRVVVEVALDDRLEPLSGLGHGIVHALTQLLLNLSQLGSHALADRRAPHHESP
Ga0207658_111346692	3300025986	Switchgrass Rhizosphere	MERSRLRKPSLSQNEDARPGDPAFLASTASGTPPECKHPIPKHTQTREVSRHRVVVEVALDDRLEPLSGLGHGIVHALTQLLLNLSQ
Ga0209863_101566091	3300026281	Prmafrost Soil	MERSRLRKPSLSQNEDPRPGEPAFLAPAAKDTPPEHKHPIRKHTQTREVSRYRVVVVVALYDRLEPSAGVEHGIVHALVELLLNLSQLGSHALSDRGAPHHESPLIHSSR
Ga0209152_102691891	3300026325	Soil	MERSRLRKPSLSQNEDARPGDPVFLAPTANGTPPECKHPIPKHTQTREVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALSDRGAPHHESP
Ga0257172_11007832	3300026482	Soil	MERTRLGKPSLSQYKEARPVDPVFLAPSANGAPPESKHPVAEHAQTLEVSRYRVVVEVALDDRLEPLSGLGHGIVHALTELLLNLSQLGSHALADR
Ga0209160_11630111	3300026532	Soil	MERTRLGKPLLSQYKDARPVDPVFLAPAANGTPPESKHPIAEHAQTLEVSRYRVVVEVALDDRLEPLSGLGHGIVHALTELLLNLSQLGSH
Ga0209056_105646181	3300026538	Soil	MDRSRLRNPSLSQNEDARPGDPAFLAPTANGTPPERKHPIPKHTQTREVSRYRVVVEVYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHH
Ga0208366_10001736	3300027073	Forest Soil	MERTRRRKPSLSHSESACPGDPALLTPASNSSPPERDHPIPKHSQAFEVSWYRVVVEVALHDRLEPSSGLGHGIMHTLAELLLNLSQFGAHVFADR
Ga0208097_10401211	3300027173	Forest Soil	MERTRRRKPSLSHSESACPGDPALLTPASNSSPPERDHPIPKHSQAFEVSWYRVVVEVALHDRLEPSSGLGHGIMHTLAELLLNLSQF
Ga0209689_11061613	3300027748	Soil	MERSRLGKPALSQNEDACPGDPAFLASTANGTPPERKHPIPKHTQTREVSRYRVVVEEALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHHESP
Ga0209274_106973561	3300027853	Soil	MERTRLRKPSRSQDKHACPVDPALLASAANSTPPEREHPIPKHAQTHEVPWYRVVVEVALHDRLEPLAGLAHGIVHPLAELLLNLPQLRPHAFGRSRYVTATSTGLWWCPVCA
Ga0209526_100528941	3300028047	Forest Soil	MERSRLGKPSLSQYKEARPVDPVFLAPSANGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPLSGLGHGIVHALTELLLNLSQLGSHALADRRAPHHESP
Ga0310038_102385041	3300030707	Peatlands Soil	MERTRWGKPSLSQYKEARPVDPVFLAPSANGTPPESKHPIAEHAQTREVSRYRVVVEVALDDRLEPLSDWGHGIVPALTESLLNLSQLGSQALADRRAPHHESP
Ga0073994_100754693	3300030991	Soil	MERSRLRKPSLSQYCKEARPVGPVFLAPSANGTPPESKRSIAEHSQTCEVSRYRVVVEVALDGRLEPLSGLGHGIVHALAELLLNLSQLDSHALAERRAPHQP
Ga0265773_10074512	3300031018	Soil	MERTRLRKPSRSQYKGTRPVDPALLAPAAKSTPPEREHPIPKHAQTREVPWYRVIVEVALHDRLEPLAGLAHGIVHPLTELLLNFSQLRPHAFANRLAPHHESP
Ga0170823_159090222	3300031128	Forest Soil	MERTRLRKPTQSQFKEARPIDPVFVAPATNGTPPESQHPIAEHAQTLEVSRYRIVVEVALDDRLEPLSGLGHGIVHALAQSLLDLSQLGSHALADRRAPYHEAP
Ga0170824_1003049852	3300031231	Forest Soil	MERTRLRKPALSQSESACPGDPAFLAPATNSSPPERDHPVPKHSQTLEVSWYRVVVEVALHDRLEPSSGLGHGIMHTLAELLLNL
Ga0302325_114090571	3300031234	Palsa	MSGGEANIRKGMERARLRKPSLTQGKGACPVDPVLLAPAAESTPPVREHPIPKHTQALEIAGDRIVVEVPLHDRLEPLAGLAHGIVHPFAELLLNLSQLRPHAFANRLAP
Ga0170818_1132054461	3300031474	Forest Soil	MERTRLRKPARSQYKGARPVDPALLAPAAKSTPPLPQHPIPKHAQTREVPWYRVVVEVALHDRPEPLAGLAHGIVHPLTELLLNLSQLRPHAFANRLAPHHESP
Ga0307474_115987721	3300031718	Hardwood Forest Soil	MERTRLRKPSRSQDKHACPVDPVLLASAANSTPPEREHPIPKHAQAREVPWYRVVVEVALHDRLEPLAGLAHGIVHPLAELLLN
Ga0307473_107285811	3300031820	Hardwood Forest Soil	MECSRLRKPSLSQSKDARPGDGAFLAPTAKSSPPERKHPIPKHAQTREVSRYRVVVEVALYDRLEPLSGLQHGIVHALAELLLNLS
Ga0307479_100324379	3300031962	Hardwood Forest Soil	MERSRLGAIAEPKDARPGDPVFLAPTASSTPPERKHPIPKHTQTRGVSRYRVVVEVALYDRLEPLSGLGHGIVHALAELLLNLSQLGSHALADRGAPHHESP
Ga0308176_119370571	3300031996	Soil	MEHLRLRSPSLSQSEDARPVDPAFLASAAKSTPPERKHPIPKHTQTREVSRHRVVVEVALHDQLEPSSGSGHGIMHALAKLLPNLSQLGSHALADRGA
Ga0307471_1009001731	3300032180	Hardwood Forest Soil	MERSRLRNPSLSQPEDARPRDPAFLAPSAKSTPPECKHPIPKHPQTRQVSWYRVVVEVALHDRLEPSTGLGHGIVHALAELLLNLSQLGSHALADRGAPHH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079887

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences