Metagenome Family F079918

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F079918
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	81 residues
Representative Sequence	MTSDTGLASLAIEQVLELSADAHIARRMTAPDSAAFHRLTGAIAAYGKALSVLVALEEREEFYAMIAQLNLPASVTGLAH
Number of Associated Samples	62
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.43 %
% of genes near scaffold ends (potentially truncated)	25.22 %
% of genes from short scaffolds (< 2000 bps)	60.87 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.391 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (40.000 % of family members)
Environment Ontology (ENVO)	Unclassified (54.783 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (89.565 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.48% β-sheet: 0.00% Coil/Unstructured: 43.52%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00483	NTP_transferase	20.00
PF13185	GAF_2	14.78
PF12867	DinB_2	13.04
PF07238	PilZ	2.61
PF04389	Peptidase_M28	2.61
PF03952	Enolase_N	2.61
PF04107	GCS2	1.74
PF14534	DUF4440	1.74
PF06170	DUF983	1.74
PF13191	AAA_16	0.87
PF00583	Acetyltransf_1	0.87
PF10944	DUF2630	0.87
PF00155	Aminotran_1_2	0.87
PF07609	DUF1572	0.87
PF00535	Glycos_transf_2	0.87
PF13620	CarboxypepD_reg	0.87
PF00266	Aminotran_5	0.87
PF01590	GAF	0.87
PF06415	iPGM_N	0.87
PF13673	Acetyltransf_10	0.87
PF06940	DUF1287	0.87
PF13451	zf-trcl	0.87
PF00032	Cytochrom_B_C	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0148	Enolase	Carbohydrate transport and metabolism [G]	2.61
COG5349	Uncharacterized conserved protein, DUF983 family	Function unknown [S]	1.74
COG0696	Phosphoglycerate mutase (BPG-independent), AlkP superfamily	Carbohydrate transport and metabolism [G]	0.87
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	0.87
COG3738	Uncharacterized conserved protein YijF, DUF1287 family	Function unknown [S]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.91 %
Unclassified	root	N/A	2.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.48 %
Unclassified	root	N/A	2.61 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.09 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	4.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.48 %
Unclassified	root	N/A	2.61 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.09 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	4.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.48 %
Unclassified	root	N/A	2.61 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.09 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	4.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.48 %
Unclassified	root	N/A	2.61 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.09 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	4.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.48 %
Unclassified	root	N/A	2.61 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10169408	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1026393	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300002909\|JGI25388J43891_1000046	All Organisms → cellular organisms → Bacteria	20416	Open in IMG/M
3300004633\|Ga0066395_10124283	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300004633\|Ga0066395_10241669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	964	Open in IMG/M
3300005167\|Ga0066672_10015646	All Organisms → cellular organisms → Bacteria	3833	Open in IMG/M
3300005167\|Ga0066672_10018615	All Organisms → cellular organisms → Bacteria → Acidobacteria	3585	Open in IMG/M
3300005171\|Ga0066677_10020294	All Organisms → cellular organisms → Bacteria	3063	Open in IMG/M
3300005175\|Ga0066673_10322667	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300005175\|Ga0066673_10568531	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005180\|Ga0066685_10423858	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005184\|Ga0066671_10033677	Not Available	2436	Open in IMG/M
3300005184\|Ga0066671_10140420	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300005332\|Ga0066388_100749425	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1577	Open in IMG/M
3300005332\|Ga0066388_100770782	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300005332\|Ga0066388_101159356	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300005332\|Ga0066388_104673604	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005332\|Ga0066388_105036115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300005454\|Ga0066687_10203249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1082	Open in IMG/M
3300005537\|Ga0070730_10219136	All Organisms → cellular organisms → Bacteria → Acidobacteria	1264	Open in IMG/M
3300005542\|Ga0070732_10031615	All Organisms → cellular organisms → Bacteria	3016	Open in IMG/M
3300005764\|Ga0066903_100095907	All Organisms → cellular organisms → Bacteria	3975	Open in IMG/M
3300005764\|Ga0066903_101177701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1421	Open in IMG/M
3300005764\|Ga0066903_101804480	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300005764\|Ga0066903_102667657	All Organisms → cellular organisms → Bacteria → Acidobacteria	969	Open in IMG/M
3300006046\|Ga0066652_100490524	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300006755\|Ga0079222_10607522	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300006755\|Ga0079222_11169964	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300006755\|Ga0079222_11797535	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006797\|Ga0066659_11480212	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300006804\|Ga0079221_10001841	All Organisms → cellular organisms → Bacteria	7015	Open in IMG/M
3300006804\|Ga0079221_10102320	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300006804\|Ga0079221_10994053	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300006806\|Ga0079220_10180497	All Organisms → cellular organisms → Bacteria → Acidobacteria	1198	Open in IMG/M
3300006854\|Ga0075425_100191672	All Organisms → cellular organisms → Bacteria → Acidobacteria	2348	Open in IMG/M
3300006854\|Ga0075425_101720491	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300006904\|Ga0075424_102520865	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006914\|Ga0075436_100172931	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300009012\|Ga0066710_102870642	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300009792\|Ga0126374_10596434	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300009792\|Ga0126374_10642347	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300010043\|Ga0126380_10006332	All Organisms → cellular organisms → Bacteria → Acidobacteria	5057	Open in IMG/M
3300010048\|Ga0126373_10002241	All Organisms → cellular organisms → Bacteria	14203	Open in IMG/M
3300010048\|Ga0126373_10033845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4442	Open in IMG/M
3300010048\|Ga0126373_10210788	All Organisms → cellular organisms → Bacteria → Acidobacteria	1889	Open in IMG/M
3300010048\|Ga0126373_10586894	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300010048\|Ga0126373_10908526	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300010320\|Ga0134109_10052377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1353	Open in IMG/M
3300010321\|Ga0134067_10074476	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300010358\|Ga0126370_10003116	All Organisms → cellular organisms → Bacteria	8035	Open in IMG/M
3300010358\|Ga0126370_10014142	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4395	Open in IMG/M
3300010358\|Ga0126370_10084604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2144	Open in IMG/M
3300010358\|Ga0126370_10126826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1820	Open in IMG/M
3300010358\|Ga0126370_11540743	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300010359\|Ga0126376_10109204	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300010359\|Ga0126376_11143003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	790	Open in IMG/M
3300010360\|Ga0126372_10140116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1911	Open in IMG/M
3300010360\|Ga0126372_10393718	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300010360\|Ga0126372_10538591	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300010360\|Ga0126372_10567893	All Organisms → cellular organisms → Bacteria → Acidobacteria	1081	Open in IMG/M
3300010361\|Ga0126378_10000536	All Organisms → cellular organisms → Bacteria → Acidobacteria	27751	Open in IMG/M
3300010361\|Ga0126378_10054237	All Organisms → cellular organisms → Bacteria → Acidobacteria	3756	Open in IMG/M
3300010361\|Ga0126378_10108476	All Organisms → cellular organisms → Bacteria	2755	Open in IMG/M
3300010361\|Ga0126378_10194688	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300010361\|Ga0126378_10245512	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1882	Open in IMG/M
3300010361\|Ga0126378_10745336	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300010361\|Ga0126378_10975592	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300010362\|Ga0126377_12492820	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300010366\|Ga0126379_10087674	All Organisms → cellular organisms → Bacteria	2722	Open in IMG/M
3300010366\|Ga0126379_13030815	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300010366\|Ga0126379_13780780	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300010376\|Ga0126381_100020274	All Organisms → cellular organisms → Bacteria → Proteobacteria	7765	Open in IMG/M
3300010376\|Ga0126381_100323844	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300010376\|Ga0126381_100489248	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300010376\|Ga0126381_100574070	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300010376\|Ga0126381_100601533	All Organisms → cellular organisms → Bacteria → Acidobacteria	1564	Open in IMG/M
3300010376\|Ga0126381_101472191	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300010398\|Ga0126383_10448709	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300012199\|Ga0137383_10246057	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300012209\|Ga0137379_10084133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3060	Open in IMG/M
3300012211\|Ga0137377_10013145	All Organisms → cellular organisms → Bacteria → Acidobacteria	7057	Open in IMG/M
3300012971\|Ga0126369_10083652	All Organisms → cellular organisms → Bacteria	2839	Open in IMG/M
3300015357\|Ga0134072_10002585	All Organisms → cellular organisms → Bacteria → Acidobacteria	3669	Open in IMG/M
3300016341\|Ga0182035_10024452	All Organisms → cellular organisms → Bacteria → Acidobacteria	3809	Open in IMG/M
3300016422\|Ga0182039_10956837	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300018431\|Ga0066655_10000017	All Organisms → cellular organisms → Bacteria	39473	Open in IMG/M
3300018431\|Ga0066655_10107397	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300018433\|Ga0066667_10007107	All Organisms → cellular organisms → Bacteria	5070	Open in IMG/M
3300018482\|Ga0066669_10029113	All Organisms → cellular organisms → Bacteria → Acidobacteria	3232	Open in IMG/M
3300021476\|Ga0187846_10451721	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300021560\|Ga0126371_10001837	All Organisms → cellular organisms → Bacteria → Acidobacteria	18064	Open in IMG/M
3300021560\|Ga0126371_10011205	All Organisms → cellular organisms → Bacteria	8095	Open in IMG/M
3300021560\|Ga0126371_10142705	All Organisms → cellular organisms → Bacteria → Acidobacteria	2448	Open in IMG/M
3300021560\|Ga0126371_10161402	All Organisms → cellular organisms → Bacteria	2312	Open in IMG/M
3300021560\|Ga0126371_10311065	Not Available	1704	Open in IMG/M
3300021560\|Ga0126371_10711879	All Organisms → cellular organisms → Bacteria → Acidobacteria	1152	Open in IMG/M
3300021560\|Ga0126371_11626676	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300021560\|Ga0126371_12010051	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300026309\|Ga0209055_1149867	Not Available	804	Open in IMG/M
3300026312\|Ga0209153_1000099	All Organisms → cellular organisms → Bacteria	43896	Open in IMG/M
3300026317\|Ga0209154_1004543	All Organisms → cellular organisms → Bacteria	7315	Open in IMG/M
3300026322\|Ga0209687_1073682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1112	Open in IMG/M
3300026323\|Ga0209472_1087917	All Organisms → cellular organisms → Bacteria → Acidobacteria	1254	Open in IMG/M
3300026542\|Ga0209805_1002514	All Organisms → cellular organisms → Bacteria	10684	Open in IMG/M
3300027725\|Ga0209178_1007137	All Organisms → cellular organisms → Bacteria	3516	Open in IMG/M
3300027725\|Ga0209178_1424769	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300027775\|Ga0209177_10092998	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300027857\|Ga0209166_10005614	All Organisms → cellular organisms → Bacteria	8526	Open in IMG/M
3300031754\|Ga0307475_10006188	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	7602	Open in IMG/M
3300031754\|Ga0307475_10009061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6547	Open in IMG/M
3300031820\|Ga0307473_10144524	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300031910\|Ga0306923_10162222	All Organisms → cellular organisms → Bacteria	2553	Open in IMG/M
3300032180\|Ga0307471_100001845	All Organisms → cellular organisms → Bacteria	11919	Open in IMG/M
3300032261\|Ga0306920_100004780	All Organisms → cellular organisms → Bacteria	17400	Open in IMG/M
3300032261\|Ga0306920_103793054	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.52%
Host-Associated	Host-Associated	3.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.52%
Plants	Host-Associated → Plants	3.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.48%
Cave	Environmental → Terrestrial → Cave	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.48%
Loam	Environmental → Terrestrial → Soil → Loam	12.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.48%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.61%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	40.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	8.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.61%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101694082	3300000597	Forest Soil	MTSDTGLASLAIEQVLELSADAHIARRMTAPDSAAFHRLTGAIAAYGKALSVLVALEEREEFYAMIAQLNLPASVTGLAH*
AF_2010_repII_A100DRAFT_10263932	3300000655	Forest Soil	MTSDTGLASLAIEEVLELSADAHIERRMTAQDSAAFHRLTGAIAAYGKALSVLVALEEREAFYAMIAQLNLPASVTGLAH*
JGI25388J43891_100004616	3300002909	Grasslands Soil	MMTSDTGLANLAIEQVLELSADAHIERRMTAQDSAAFQRLTGAIHAYGKALSLLVALQEREEFFAMIAQLNLPVSVTGLAH*
Ga0066395_101242831	3300004633	Tropical Forest Soil	MDASLGLANVAIERVLELSADAHIERRMAPKDSPAFHRLTGTIMAYGRALSVLVALQEREEFYAMITQLNLPESVTGVAH*
Ga0066395_102416692	3300004633	Tropical Forest Soil	MTSDTGLATLVIEQVLELSADAHIERRMTAQDSAAFHRLTGAIAAYGKALSLLLALEEREEFYALIAQVNPVTGLAH*
Ga0066672_100156464	3300005167	Soil	MNASSGLANLAIEQVLELSAEAHIERRMTALDSPAFHRLTGTIVAYGKMLTLLVALQEREEFYAMIAQLDLPASVTGLAH*
Ga0066672_100186152	3300005167	Soil	MNASSGFAQAAIEQVLELSADAHIERRMTTQGSPAFYRLTGTIAAYGKALSVLVELQEREELYALIAQLNLPESVTGVAH*
Ga0066677_100202944	3300005171	Soil	MKASSGLANLAIEGVLELSADAHIQRKMAARGSSDFHRLTGAIAAYGNAIAVLVALQEREELCAMVAELNLPPSATGVAH*
Ga0066673_103226672	3300005175	Soil	MKAISGLANLAIEGVLELSADAHIQRKMAARGSSDFHRLTGAIAAYGNAIAVLVALQEREELCAMVAELNLPPSATGVAH*
Ga0066673_105685311	3300005175	Soil	MTTSDTGLANLAIEQVLELSADARIERRMTAQDSAAFQRLTGAIHAYGKALSLLVALQEREEFFAMIAQLNLPVSVTGLAH*
Ga0066685_104238582	3300005180	Soil	LPVMKASSGLANLAIEGVLELSADAHIQRKMAARGSSDFHRLTGAIAAYGNAIAVLVALQEREELCAMVAELNLPPSATGVAH*
Ga0066671_100336772	3300005184	Soil	MKTDAGLANIAIEQILEMSADAHIERRLTFPDSPDFQRLSGTITAYGKVLTLLVALQEREEFYAMIAQLNLPASVTGLAH*
Ga0066671_101404202	3300005184	Soil	MNASFAQAAIEQVLELSADAHIERRMTTQGSPAFYRLTGTIAAYGKALSVLVELQEREEFYALIAQLNLPESVTGVAH*
Ga0066388_1007494253	3300005332	Tropical Forest Soil	MYVRRRGKEACHEVSSGLTNLAIERVLELSADAHVQRRMTAKNSPAFHSLTGAIVAYGKALRLLAALREREEFYSMIAEMELLEAHSGLLH*
Ga0066388_1007707821	3300005332	Tropical Forest Soil	MTSDTGLATLAIRQVLELSADAHVERPVTAQDSAAFHRLTGAIAAYGKALSLLLALEEREEFYAMIAQV
Ga0066388_1011593563	3300005332	Tropical Forest Soil	MKISSPVANLAIERVLELSADAHIERRMSVKGSAAFQNLTGAIAAYGKALRVLVALREREELYALLAELEPQEAYSGLVH*
Ga0066388_1046736042	3300005332	Tropical Forest Soil	MKASSGLANLAIEGVLELSADAHIQRKMSARGSSDFHRLTGAIVAYGNALAVLVSLQESEDLCAMIAELELPASVTEVAH*
Ga0066388_1050361151	3300005332	Tropical Forest Soil	ANLAIEGVLELSADAHIERKMTARGSSDFHRLTGAIAAYGNALTFLVLLKEREELHAMIVDLDLPALRTGVSLN*
Ga0066687_102032492	3300005454	Soil	MMTSDTGLANLAIEQVLELSADAHIERRMTAQDSAAFQRLTGAIHAYGKALSLLVALQEREEFFAM
Ga0070730_102191363	3300005537	Surface Soil	MKASSGLANLAIEGVLELSADAHIQRKMTVRNSSDFHRLTGAIAAYGNALAVLVELQEREELCAMITELN
Ga0070732_100316152	3300005542	Surface Soil	MDASLGLANAAIERVLELSADAHIERRIAPKDSPAFHRLTGEIVAYGSALSVLVALQEREEFFAMIAQLNLPESVTGVAH*
Ga0066903_1000959073	3300005764	Tropical Forest Soil	MYDSRERQEAPAMDASLGLANVAIERVLELSADAHIERRMAPKDSPAFHRLTGTIMAYGRALSVLVALQEREEFYAMITQLNLPESVTGVAH*
Ga0066903_1011777011	3300005764	Tropical Forest Soil	RASSDLTNLAIEGVLELSANAHVQRKVAARNSSDFRRLTGAIAAYGNALAVLVALQEREEFHAMIAELDLPASVTGIAH*
Ga0066903_1018044802	3300005764	Tropical Forest Soil	MDANTGLANVAIERVLELSADAHIERRMTPKDCPAFHRLTGTIVGYGRALSVLVALQEREEFFAMMAQLNLPESATEVAH*
Ga0066903_1026676571	3300005764	Tropical Forest Soil	MKASSGLANLAIEGVLELSADAHIQRKMADRNSSDFHRLTGAIAAYGSALAVLVALQEHEELCAMIAELNLPASVTGVAH*
Ga0066652_1004905241	3300006046	Soil	DTGLANLAIEQVLELSADAHIERRMTAQDSAAFQRLTGAIHAYGKALSLLVALQEREEFFAMIAQLNLPVSVTGLAH*
Ga0079222_106075222	3300006755	Agricultural Soil	MKTSSGLANLAIEGVLELSADAHIQRKLAARGSLDFHRLTGAIAAYGNALAVLVELQEREELCAIIAELNLPASVTGAPN*
Ga0079222_111699642	3300006755	Agricultural Soil	MKTSSGLANLAIEGVLELSADAHIQRKMAARGSSDFHRLTGAITAYGNALAVLVALQEREEFCAMVAELNLAESVTGVAH*
Ga0079222_117975352	3300006755	Agricultural Soil	MKASSGLANLAIEGVLELSADAHIQRKMTVRNSSDFHRLTGAIAAYGNALAVLVELQEREEWCAMITELNLPASVTGVAH*
Ga0066659_114802121	3300006797	Soil	ILEMSADAHIERRLTFPDSPDFQRLSGTITAYGKVLTLLVALQEREEFYAMIAQLNLPASVTGLAH*
Ga0079221_100018414	3300006804	Agricultural Soil	MTTSSGLANLGIEEVLELSADAHIQRKMTTRNSSDFHRLTGAIAAYGNALAILVSLQEREELSAMIAELNLPASVTGLAH*
Ga0079221_101023202	3300006804	Agricultural Soil	MDASLGLANTAIERVLELSADAHIERRIAPKDSPAFHRLTGTITAYGRALSVLVALQEREEFYAMIAQLNLPESVTGVAH*
Ga0079221_109940531	3300006804	Agricultural Soil	MKTSSGLANLAIEGVLELSADAHIQRKMAARGSLDFHRLTGAIAAYGNALAVLVELQEREELCAIIAELNLPASVTGAAN*
Ga0079220_101804972	3300006806	Agricultural Soil	MKTSSGLANLAIEGVLELSADAHIQRKLAARGSLDFHRLTGAIAAYGNALAVLVELQEREELCAIIAELNLPASVTGAAN*
Ga0075425_1001916721	3300006854	Populus Rhizosphere	MKTSSGLANLAIEGVLELSADAHIQRKVAARGSSDFHRLTGAIAAYGNALEVLVALQEREELCAMIAELNLPASMTRVAH*
Ga0075425_1017204912	3300006854	Populus Rhizosphere	MKTSSGLANLAIEGVLELSADAHIQRKLAARGSLDFHRLTGAIAAYGNALAVLVELQEREELYAIIAELNLPASVTGVAH*
Ga0075424_1025208651	3300006904	Populus Rhizosphere	LRVPYVKKEEGGLPVMKTSSGLANLAIEGVLELSADAHIQRKVAARGSSDFHRLTGAIAAYGNALEVLVALQEREELCAMIAELNLPASMTRVAH*
Ga0075436_1001729312	3300006914	Populus Rhizosphere	MKTSSGLANLAIEGVLELSADAHIQRKLAARGSLDFHRLTGAIAAYGNALAVLVELQEREELCAIIAELNLPASVTGVAH*
Ga0066710_1028706422	3300009012	Grasslands Soil	MKASSGLANLAIEGVLELSADAHIQRKMAARGSSDFHRLTGAIAAYGNAIAVLVALQEREELCAMVAELNLPPSATGVAL
Ga0126374_105964342	3300009792	Tropical Forest Soil	VMTSDTGLATLAIRQVLELSADAHVERPVTAQDSAAFHRLTGAIAAYGKALSLPLALDEREEFYAMIAQVNPVTGLAH*
Ga0126374_106423471	3300009792	Tropical Forest Soil	MSSGLANLAIEAVLELSADAHIERRMTAKGSPAFHSLTGAIAAYGKTLKFLAALREREEFYAILAELEPLESYCGLVH*
Ga0126380_100063322	3300010043	Tropical Forest Soil	MRASSDLTNLAIEGVLELSANAHVQRKVAARNSSDFHRLTGAIAAYGNALAVLVALQEREEFHAMIAELDLPASVTGIAH*
Ga0126373_100022418	3300010048	Tropical Forest Soil	MSEESKEGGLPVMTSDTGLATLAIRQVLELSADAHVERPVTAQDSAAFHRLTGAIAAYGKALSLLLALEEREEFYAMIAQVNPVTGLAH*
Ga0126373_100338452	3300010048	Tropical Forest Soil	MSEERKEGGLPVMTRDTGLANSAIEQVLELSADAHIERRMTAQDSAAFHRLTGAILAYGRTLSLLVALEEREEFFAMIAQLNLPASVTGLAH*
Ga0126373_102107882	3300010048	Tropical Forest Soil	MSEKRKEGGPPVMTPDTGLANLAIEQVLELSANAHIERCMTARNSAAFDRLSGAISAYGKTLSLLVALREREEFYAMIAELDLPAAVTGLAH*
Ga0126373_105868941	3300010048	Tropical Forest Soil	KEGGLPVMKAISGLANLAIEGVLELSADAHIERKMTAKGSSDFHRLTGAITAYGNALAVLVSLKEREELHALIVELDLPALVTGVAH*
Ga0126373_109085262	3300010048	Tropical Forest Soil	MRMSSGLANLAIEAVLELSADAHIERRMTAKGSHAFHSLTGAIAAYGKTLKLLAALREREEFYATLAELEPLESYCGLVH*
Ga0134109_100523773	3300010320	Grasslands Soil	MMTSDTGLANLAIEQVLELSADAHIERRMTAQDSAAFQRLTGAIHAYGKALSLLVALQEREEFFAMIAQ
Ga0134067_100744761	3300010321	Grasslands Soil	RDFLYAYRAMRVYLIYVRRKKGGLPVMNASSGLANLAIEQVLELSAEAHIERRMTALDSPAFHRLTGTIVAYGKMLTLLVALQEREEFYAMIAQLDLPASVTGLAH*
Ga0126370_100031166	3300010358	Tropical Forest Soil	MRAFTPYKQAGPRVPLYAKEEGGLLIMKASSGLANLAIEGVLELSADAHIQRKMAARNSSEFQRLSGAIAAYGNALAILVALQEREELHAMIAELNLPASVTGVAH*
Ga0126370_100141423	3300010358	Tropical Forest Soil	MKAISGLANLAIEGVLELSADAHIERKMTAKGSSDFHRLTGAITAYGNALAVLVSLKEREELHALIVELDLPALVTGVAH*
Ga0126370_100846041	3300010358	Tropical Forest Soil	MDASLGLANVAIERVLELSADAHIERRMAPKDSPAFHRLTGTIMAYGRALSVLVALQEREEFFAMMAQLNLPESATEVAH*
Ga0126370_101268263	3300010358	Tropical Forest Soil	AIERVLELSADAHIERRMTAKNSPAFHSLTGAIVAYGKALRLLAALREREEFYSMIAEIELPGAHSGLVH*
Ga0126370_115407431	3300010358	Tropical Forest Soil	MVMKASSGLANLAIEGVLELSADAHIQRKMADRNSSDFHRLTGAIAAYGSALAVLVALQEHEELCAMIAELNLPASVTGV
Ga0126376_101092044	3300010359	Tropical Forest Soil	MSSGLANIAIEAVLELSADAHIERRMTAKGSPTFHSLTGAIAAYGKTLKFLAALREREEFYAILAELEPLESYCGMVH*
Ga0126376_111430032	3300010359	Tropical Forest Soil	MSEESKEGGLPVMTSDTGLATLVIEQVLELSADAHNERRTTAEDSAAFHRLTGAIAAYGKALSLLLALEEREEFYA
Ga0126372_101401161	3300010360	Tropical Forest Soil	MYDSRERQEAPAMDASLGLANTAIERVLELSADAHIERRMAPKDSPAFHRLTGTIMAYGRALSVLVALQEREEFFAMMAQLNLPESATEVAH*
Ga0126372_103937182	3300010360	Tropical Forest Soil	MSGEEGRRPAMRVSSGLTNLAIERVLELSADAHIERRMTAKNSPAFHSLTGAIVAYGKALRLLAALREREEFYSMIAEMELLEAHSGLLH*
Ga0126372_105385912	3300010360	Tropical Forest Soil	MSEESKEGGLPVMTSDTGLATLAIRQVLELSADAHVERPVTAQDSAAFHRLTGAIAAYGKALSLLLALEEREEFYALIAQVNPVTGLAH*
Ga0126372_105678932	3300010360	Tropical Forest Soil	MRMSSGLANLAIEAVLELSADAHIERRMTAKGSPAFHSLTGAIAAYGKTLKFLAALREREEFYAILAELEPLESYCGLVH*
Ga0126378_1000053619	3300010361	Tropical Forest Soil	MKAISGLANLAIEGVLELSADAHIERKLTAKGSSDFHRLTGAITAYGNALAVLVSLKEREELHALIVELDLPALVTGVAH*
Ga0126378_100542374	3300010361	Tropical Forest Soil	MYDSRERQEAPVMDASLGLANVAIERVLELSADAHIERRMAPKDSPAFHRLTGTIMAYGRALSVLVALQEREEFYAMITQLNLPESVTGVAH*
Ga0126378_101084762	3300010361	Tropical Forest Soil	MKMSSGLANLAIEAVLELSADAHIERRMTAKGSHAFHSLTGAIAAYGKTLKLLAALREREEFYAILAELEPLESYCGMVH*
Ga0126378_101946883	3300010361	Tropical Forest Soil	MSEESKQGGLPVMTSDTGLACLAIEEVLELSADAHIERRMTAQDSAAFHRLTGAIAAYGKALSVLVALEEREEFYAMIAQLNPPASVTGLAH*
Ga0126378_102455123	3300010361	Tropical Forest Soil	MSGEEGRRPAMRVSSGLTNLAIERVLELSADAHIERRMTAKNSPAFHSLTGAIVAYGKALRLLAALREREEFYSVIAEIELPGAHSGLVH*
Ga0126378_107453362	3300010361	Tropical Forest Soil	SMSEERKEGGLPVMTRDTGLANSAIEQVLELSADAHIERRMTAQDSAAFHRLTGAILAYGRTLSLLVALEEREEFFAMIAQLNLPASVTGLAH*
Ga0126378_109755922	3300010361	Tropical Forest Soil	MKESSGLTNLAIEGVLELSADAHIQRKTAARNSSDFHRLTGAIAAYGNALAVLVALQEREELHAMIAELDLPASVTSVAH*
Ga0126377_124928201	3300010362	Tropical Forest Soil	MSSGLANIAIEAVLELSADAHIERRMTAKGSPAFHRLTGAIAAYSKTLKFLAALREREEFYAILAELEPLESYCGMVH*
Ga0126379_100876742	3300010366	Tropical Forest Soil	MSSGLANIAIEAVLELSADAHIERRMTAKGSPAFHSLTGAIAAYGKTLKFLAALREREEFYAILAELEPLESYCGLVH*
Ga0126379_130308152	3300010366	Tropical Forest Soil	MKMSSALANLAIERVLELSADAHIERRMSVKGSVAFQNLTGAIAAYGKALKVLIALREREEFYAMLAELEPHEAHPGLVH*
Ga0126379_137807801	3300010366	Tropical Forest Soil	EGRRPAAMKASSGLANLAIEGVLELSADAHIQRKMSARGSSDFHRLTGAIAAYGNALAVLVALQERDELSAMIAELELPGSVTEVAH*
Ga0126381_1000202742	3300010376	Tropical Forest Soil	MKAITGLANLAIEGVLELSADAHIERKMTARGSSDFHRLTGAIAAYGNALTFLVLLKEREELHAMIVDLDLPALRTGVAH*
Ga0126381_1003238443	3300010376	Tropical Forest Soil	MSSGLANIAIEAVLELSADAHIERRMTAKGSPTFHSLTGAIAAYGKTLKFLAALREREEFYAILAELEPLESYCGLVH*
Ga0126381_1004892482	3300010376	Tropical Forest Soil	MSEESKEGGLPVMTSDTGLATLAIRQVLELSADAHVERPVTAQDSAAFHRLTGAIAAYGKALSLLLALDEREEFYAMIAQVNPVTGLAHQMYVAEELSGM*
Ga0126381_1005740703	3300010376	Tropical Forest Soil	MPEERKEGGLPVMTSNTGLANLAIEQVLELSADAHIERRMTAQDSAAFHRLTGAILAYGRTLSLLVALEEREEFFAMIAQLDLPASVTGWAH*
Ga0126381_1006015333	3300010376	Tropical Forest Soil	MKASSGLANLAIEGVLELSADAHIQRKMSARGSSDFHRLTGAIAAYGNALAVLVSLQESEDLCAMMAELELPACVTGVAH*
Ga0126381_1014721911	3300010376	Tropical Forest Soil	PAMDANTGLANVAIERVLELSADAHIERRMTPKDCPAFHRLTGTIVGYGRALSVLVALQEREEFFAMMAQLNLPESATEVAH*
Ga0126383_104487092	3300010398	Tropical Forest Soil	MSEESKQGGLPVMTSDTGLACLAIEEVLELSADAHIERRMTAQDSAAFHRLTGAIAAYGKALSVLVALEEREEFYAMIAQLNLPASVTGLAH*
Ga0137383_102460572	3300012199	Vadose Zone Soil	MKTSSGLANLAIEGVLELSADAHIQRKMAARGSSDFHRLTGAIAAYGNALEVLVALQEREEWCAMIAELNLAESVTGVAH*
Ga0137379_100841333	3300012209	Vadose Zone Soil	MMTSDTGLANLAIEQVLELSADAHIERRMTAQDSAAFQRLTGAIHAYGKVLSLLVALQEREEFFAMIAQLNLPVSVTGLAH*
Ga0137377_100131456	3300012211	Vadose Zone Soil	MQHSLYANHPGGAHPYLCQRKERKEGGLPVMTSDTGLANLAIEQVLELSADAHIERRMTAQDSAAFHRLSGAILAYGRTLSLLVALHEREEFYAMIAQMNLPASVTGLAH*
Ga0126369_100836522	3300012971	Tropical Forest Soil	MKAISGLANLAIEGVLELSADAHIERKMTAKGSSDFHRLTGAITAYGNALAVLVSLKEREEVHALIVELDLPALVTGVAH*
Ga0134072_100025855	3300015357	Grasslands Soil	MNASSGLANLAIEQVLELSAEAHIERRMTALDSPAFHRLTGTIVAYGKMLTLLVALQEREEFYAMIAHLDLPASVTGLAH*
Ga0182035_100244521	3300016341	Soil	MTSNTGLANLAIEQVLELSADAPIERRMTAQDSAAFHRLTGAILAYGRTLSLLVALEEREEFLAMIAQLELPASVTGWRINRMADLRYVAEELSRM
Ga0182039_109568371	3300016422	Soil	IEQVLELSADAHIERRMTAQDSAAFHRLTGAIAAYGKALSLLLALEEREEFYAMIAQVHPVTGLAH
Ga0066655_1000001725	3300018431	Grasslands Soil	MMTSDTGLANLAIEQVLELSADAHIERRMTAQDSAAFQRLTGAIHAYGKALSLLVALQEREEFFAMIAQLNLPVSVTGLAH
Ga0066655_101073971	3300018431	Grasslands Soil	MKASSGLANLAIEGVLELSADAHIQRKMAARGSSDFHRLTGAIAAYGNAIAVLVALQEREELCAMVAELNLPPSATGVAH
Ga0066667_100071072	3300018433	Grasslands Soil	MNASSGLANLAIEQVLELSAEAHIERRMTALDSPAFHRLTGTIVAYGKMLTLLVALQEREEFYAMIAQLDLPASVTGLAH
Ga0066669_100291132	3300018482	Grasslands Soil	MKAISGLANLAIEGVLELSADAHIQRKMAARGSSDFHRLTGAIAAYGNAIAVLVALQEREELCAMVAELNLPPSATGVAH
Ga0187846_104517212	3300021476	Biofilm	MMRVASGLANEVIEQILELSADAQIVRRGTVKDSPAFHALTGTIIAYGKALGLLIAVREREEFYAILDELELPPSVSGQVN
Ga0126371_100018373	3300021560	Tropical Forest Soil	MTSDTGLATLVIEQVLELSADAHIERRMTAQDSAAFHRLTGAIAAYGKALSLLLALEEREEFYALIAQVNPVTGLAH
Ga0126371_100112053	3300021560	Tropical Forest Soil	MKAITGLANLAIEGVLELSADAHIERKMTARGSSDFHRLTGAIAAYGNALTFLVLLKEREELHAMIVDLDLPALRTGVAH
Ga0126371_101427053	3300021560	Tropical Forest Soil	MRASSDLTNLAIEGVLELSANAHVQRKVAARNSSDFHRLTGAIAAYGNALAVLVALQEREEFHAMIAELDLPASVTGIAH
Ga0126371_101614021	3300021560	Tropical Forest Soil	IERVLELSADAHIERRMTPKDCPAFHRLTGTIVGYGRALSVLVALQEREEFFAMMAQLNLPESATEVAH
Ga0126371_103110651	3300021560	Tropical Forest Soil	MKAISGLANLAIEGVLELSADAHIERKMTAKGSSDFHRLTGAITAYGNALAVLVSLKEREELHALIVELDLPALVTGVAH
Ga0126371_107118791	3300021560	Tropical Forest Soil	MKASSGLANLAIEGVLELSADAHIQRKMAARNSSEFQRLSGAIAAYGNALAILVALQEREELHAMIAELNLPASVTGVAH
Ga0126371_116266762	3300021560	Tropical Forest Soil	MKMSSGLANLAIEAVLELSADAHIERRMTAKGSHAFHSLTGAIAAYGKTLKFLAALREREEFYAILAELEPLESYCGLVH
Ga0126371_120100512	3300021560	Tropical Forest Soil	MVMKASSGLTNLAIEGILELSADAHIQRKRSARGSSDFHRLTGAIAAYGNALAVLVSLQESEDLCAIMAELELPACVTGVAH
Ga0209055_11498672	3300026309	Soil	MNASSGFAQAAIEQVLELSADAHIERRMTTQGSPAFYRLTGTIAAYGKALSVLVELQEREELYALIAQLNLPESVTGVAH
Ga0209153_100009920	3300026312	Soil	MKTDAGLANIAIEQILEMSADAHIERRLTFPDSPDFQRLSGTITAYGKVLTLLVALQEREEFYAMIAQLNLPASVTGLAH
Ga0209154_100454311	3300026317	Soil	MNASFAQAAIEQVLELSADAHIERRMTTQGSPAFYRLTGTIAAYGKALSVLVELQEREEFYALIAIRQEPKEL
Ga0209687_10736822	3300026322	Soil	MMTSDTGLANLAIEQVLELSADAHIERRMTAQDSAAFQRLTGAIHAYGKALSLLVALQEREEFFAMIAQLNL
Ga0209472_10879172	3300026323	Soil	MKAISGLANLAIEGVLELSADAHIQRKMAARGSSDFHRLTGAIAAYGNAIAVLVALQEREELCAMV
Ga0209805_100251410	3300026542	Soil	MNASFAQAAIEQVLELSADAHIERRMTTQGSPAFYRLTGTIAAYGKALSVLVELQEREEFYALIAQLNLPESVTGVAH
Ga0209178_10071374	3300027725	Agricultural Soil	MTTSSGLANLGIEEVLELSADAHIQRKMTTRNSSDFHRLTGAIAAYGNALAILVSLQEREELSAMIAELNLPASVTGLAH
Ga0209178_14247691	3300027725	Agricultural Soil	LANLAIEGVLELSADAHIQRKLAARGSLDFHRLTGAIAAYGNALAVLVELQEREELCAIIAELNLPASVTGVAH
Ga0209177_100929982	3300027775	Agricultural Soil	MKTSSGLANLAIEGVLELSADAHIQRKLAARGSLDFHRLTGAIAAYGNALAVLVELQEREELCAIIAELNLPASVTGVAH
Ga0209166_100056149	3300027857	Surface Soil	MKASSGLANLAIEGVLELSADAHIQRKMTVRNSSDFHRLTGAIAAYGNALAVLVELQEREELCAMITELNLPASVTGVAH
Ga0307475_100061881	3300031754	Hardwood Forest Soil	LELSADAHIERRMTAQDSAAFQRLTGAIHAYGKALSLLVALQEREEFFAMIAQLNLPVSVTGLAH
Ga0307475_100090618	3300031754	Hardwood Forest Soil	MTSDTGLAKLAIAQVLELSADAHIERRMVAQDSAAFHRLTGAIAAYGKALSLLVALEEREQLYAMIAQLNLPRSVTELAH
Ga0307473_101445242	3300031820	Hardwood Forest Soil	SDTGLANLAIEQVLELSADAHIERRMTAQDSAAFQRLTGAIHAYGKALSLLVALQEREEFFAMIAQLNLPVSVTGLAH
Ga0306923_101622223	3300031910	Soil	MTSDTGHATLAIEQVLELSADAHIERRMTAQDSAAFHRLTGAIAAYGKALSLLLALEEREEFYAMIAQVHPVTGLAH
Ga0307471_10000184513	3300032180	Hardwood Forest Soil	MKTSSGLANPAIEGVLELSADAHIQRKMAARGSSDFHRLTGAIAAYGNALAVLVALQEREEFCAMVAELNLPASVTGVAH
Ga0306920_1000047802	3300032261	Soil	MTSDTGHATLAIEQVLELSAAAHIERRMTAQDSAAFHRLTGAIAAYGKALSLLLALEEREEFYAMIAQVHPVTGLAH
Ga0306920_1037930541	3300032261	Soil	AIERVLELSADAHIERRIAPKDSPAFHRLTGTIVAYGRALSVLVALQEREEFYTMIAQLNLPESVTGVAH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079918

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences