NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080223

Metagenome / Metatranscriptome Family F080223

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080223
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 86 residues
Representative Sequence MDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFVECCLYVLLVIIESFFLAVRESVIARTLLYKVSIAIVSRSF
Number of Associated Samples 105
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 32.17 %
% of genes from short scaffolds (< 2000 bps) 80.87 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.261 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(21.739 % of family members)
Environment Ontology (ENVO) Unclassified
(33.913 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.348 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF09907HigB_toxin 4.35
PF00400WD40 3.48
PF02604PhdYeFM_antitox 2.61
PF00092VWA 1.74
PF00581Rhodanese 1.74
PF12730ABC2_membrane_4 1.74
PF00575S1 1.74
PF13620CarboxypepD_reg 0.87
PF07670Gate 0.87
PF09722Xre_MbcA_ParS_C 0.87
PF07715Plug 0.87
PF02142MGS 0.87
PF13533Biotin_lipoyl_2 0.87
PF00069Pkinase 0.87
PF01139RtcB 0.87
PF05973Gp49 0.87
PF07927HicA_toxin 0.87
PF04185Phosphoesterase 0.87
PF13185GAF_2 0.87
PF00924MS_channel 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.48
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 2.61
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 2.61
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 0.87
COG1690RNA-splicing ligase RtcB, repairs tRNA damageTranslation, ribosomal structure and biogenesis [J] 0.87
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 0.87
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 0.87
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.87
COG3657Putative component of the toxin-antitoxin plasmid stabilization moduleDefense mechanisms [V] 0.87
COG4679Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin systemDefense mechanisms [V] 0.87

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.26 %
UnclassifiedrootN/A1.74 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003228|JGI26300J46817_100721All Organisms → cellular organisms → Bacteria → Acidobacteria1468Open in IMG/M
3300004156|Ga0062589_102207336All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300004157|Ga0062590_100382419All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300004643|Ga0062591_101772735All Organisms → cellular organisms → Bacteria → Acidobacteria629Open in IMG/M
3300005093|Ga0062594_102545991All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300005176|Ga0066679_11051740All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300005177|Ga0066690_10721244All Organisms → cellular organisms → Bacteria → Acidobacteria657Open in IMG/M
3300005180|Ga0066685_11113242All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300005289|Ga0065704_10016819All Organisms → cellular organisms → Bacteria → Acidobacteria2263Open in IMG/M
3300005294|Ga0065705_10044520All Organisms → cellular organisms → Bacteria → Acidobacteria840Open in IMG/M
3300005332|Ga0066388_105900508All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300005334|Ga0068869_100528059All Organisms → cellular organisms → Bacteria → Acidobacteria989Open in IMG/M
3300005354|Ga0070675_101008873All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300005468|Ga0070707_100083307All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia3090Open in IMG/M
3300005536|Ga0070697_101563340All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella590Open in IMG/M
3300005549|Ga0070704_100244244All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1471Open in IMG/M
3300005549|Ga0070704_101286096All Organisms → cellular organisms → Bacteria → Acidobacteria669Open in IMG/M
3300005554|Ga0066661_10704874All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300005561|Ga0066699_10702891All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300005568|Ga0066703_10588490All Organisms → cellular organisms → Bacteria → Acidobacteria650Open in IMG/M
3300005574|Ga0066694_10619144All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300005575|Ga0066702_10765890All Organisms → cellular organisms → Bacteria → Acidobacteria574Open in IMG/M
3300005843|Ga0068860_100083857All Organisms → cellular organisms → Bacteria → Acidobacteria3031Open in IMG/M
3300005985|Ga0081539_10020962All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium4387Open in IMG/M
3300006032|Ga0066696_10595657All Organisms → cellular organisms → Bacteria → Acidobacteria718Open in IMG/M
3300006196|Ga0075422_10041918All Organisms → cellular organisms → Bacteria1632Open in IMG/M
3300006794|Ga0066658_10134096All Organisms → cellular organisms → Bacteria → Acidobacteria1230Open in IMG/M
3300006796|Ga0066665_11172596All Organisms → cellular organisms → Bacteria → Acidobacteria585Open in IMG/M
3300006800|Ga0066660_10030633All Organisms → cellular organisms → Bacteria3302Open in IMG/M
3300006800|Ga0066660_10560284All Organisms → cellular organisms → Bacteria → Acidobacteria958Open in IMG/M
3300006914|Ga0075436_100000007All Organisms → cellular organisms → Bacteria288785Open in IMG/M
3300007258|Ga0099793_10707321All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300007788|Ga0099795_10100910All Organisms → cellular organisms → Bacteria → Acidobacteria1132Open in IMG/M
3300009012|Ga0066710_100285626All Organisms → cellular organisms → Bacteria → Proteobacteria2408Open in IMG/M
3300009012|Ga0066710_101152405All Organisms → cellular organisms → Bacteria → Acidobacteria1200Open in IMG/M
3300009038|Ga0099829_10798806All Organisms → cellular organisms → Bacteria → Acidobacteria784Open in IMG/M
3300009038|Ga0099829_11719106All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300009088|Ga0099830_10204719All Organisms → cellular organisms → Bacteria → Proteobacteria1546Open in IMG/M
3300009098|Ga0105245_10361556All Organisms → cellular organisms → Bacteria1441Open in IMG/M
3300009098|Ga0105245_13137624All Organisms → cellular organisms → Bacteria → Acidobacteria512Open in IMG/M
3300009137|Ga0066709_100336709All Organisms → cellular organisms → Bacteria → Proteobacteria2067Open in IMG/M
3300009137|Ga0066709_100494815All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia1720Open in IMG/M
3300010047|Ga0126382_11460200All Organisms → cellular organisms → Bacteria → Acidobacteria627Open in IMG/M
3300010159|Ga0099796_10104002All Organisms → cellular organisms → Bacteria → Acidobacteria1072Open in IMG/M
3300010320|Ga0134109_10373593All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300010322|Ga0134084_10287607All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300010337|Ga0134062_10179078All Organisms → cellular organisms → Bacteria → Acidobacteria957Open in IMG/M
3300010360|Ga0126372_10960056All Organisms → cellular organisms → Bacteria → Acidobacteria863Open in IMG/M
3300010397|Ga0134124_12593101All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300010400|Ga0134122_10740609All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300010401|Ga0134121_10565450All Organisms → cellular organisms → Bacteria → Acidobacteria1058Open in IMG/M
3300010403|Ga0134123_11902081All Organisms → cellular organisms → Bacteria → Acidobacteria651Open in IMG/M
3300011269|Ga0137392_10085361All Organisms → cellular organisms → Bacteria → Acidobacteria2459Open in IMG/M
3300011401|Ga0153984_1075361All Organisms → cellular organisms → Bacteria → Acidobacteria705Open in IMG/M
3300011436|Ga0137458_1011008All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium2063Open in IMG/M
3300012096|Ga0137389_10712793All Organisms → cellular organisms → Bacteria → Acidobacteria862Open in IMG/M
3300012204|Ga0137374_10006901All Organisms → cellular organisms → Bacteria13549Open in IMG/M
3300012204|Ga0137374_10671456Not Available782Open in IMG/M
3300012211|Ga0137377_11935554All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300012354|Ga0137366_10100479Not Available2193Open in IMG/M
3300012361|Ga0137360_10206652All Organisms → cellular organisms → Bacteria → Acidobacteria1592Open in IMG/M
3300012363|Ga0137390_10811354All Organisms → cellular organisms → Bacteria → Acidobacteria893Open in IMG/M
3300012390|Ga0134054_1222617All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300012397|Ga0134056_1149279All Organisms → cellular organisms → Bacteria → Acidobacteria544Open in IMG/M
3300012493|Ga0157355_1021379All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300012582|Ga0137358_10195739All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium1379Open in IMG/M
3300012912|Ga0157306_10326155All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300012917|Ga0137395_10600168All Organisms → cellular organisms → Bacteria → Acidobacteria796Open in IMG/M
3300012927|Ga0137416_11348899All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300012927|Ga0137416_11917353All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300012929|Ga0137404_10122441All Organisms → cellular organisms → Bacteria → Acidobacteria2128Open in IMG/M
3300012929|Ga0137404_10609794All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium982Open in IMG/M
3300012930|Ga0137407_11293645All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300012955|Ga0164298_10787861All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300013102|Ga0157371_10993514All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300013308|Ga0157375_12013440All Organisms → cellular organisms → Bacteria → Acidobacteria686Open in IMG/M
3300014056|Ga0120125_1158772All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300014150|Ga0134081_10052925All Organisms → cellular organisms → Bacteria → Acidobacteria1216Open in IMG/M
3300015078|Ga0167660_1003060All Organisms → cellular organisms → Bacteria → Acidobacteria1706Open in IMG/M
3300015242|Ga0137412_10178510All Organisms → cellular organisms → Bacteria → Acidobacteria1704Open in IMG/M
3300015252|Ga0180075_1085415All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300015264|Ga0137403_10015891All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae8153Open in IMG/M
3300015356|Ga0134073_10305752All Organisms → cellular organisms → Bacteria → Acidobacteria569Open in IMG/M
3300017792|Ga0163161_11652880All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300018027|Ga0184605_10505124All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300018061|Ga0184619_10127395All Organisms → cellular organisms → Bacteria → Acidobacteria1155Open in IMG/M
3300019883|Ga0193725_1125373All Organisms → cellular organisms → Bacteria → Acidobacteria580Open in IMG/M
3300020010|Ga0193749_1008181All Organisms → cellular organisms → Bacteria → Acidobacteria2030Open in IMG/M
3300020170|Ga0179594_10011511All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia2480Open in IMG/M
3300024232|Ga0247664_1018940All Organisms → cellular organisms → Bacteria1601Open in IMG/M
3300024275|Ga0247674_1019927All Organisms → cellular organisms → Bacteria → Acidobacteria775Open in IMG/M
3300025906|Ga0207699_10319661All Organisms → cellular organisms → Bacteria → Acidobacteria1088Open in IMG/M
3300025917|Ga0207660_10313554All Organisms → cellular organisms → Bacteria → Proteobacteria1251Open in IMG/M
3300025922|Ga0207646_10053594All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia3608Open in IMG/M
3300025927|Ga0207687_10352355All Organisms → cellular organisms → Bacteria → Acidobacteria1200Open in IMG/M
3300025930|Ga0207701_11063609All Organisms → cellular organisms → Bacteria → Acidobacteria672Open in IMG/M
3300025961|Ga0207712_11431575All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300026314|Ga0209268_1165410All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300026530|Ga0209807_1162416All Organisms → cellular organisms → Bacteria → Acidobacteria838Open in IMG/M
3300026550|Ga0209474_10020351All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium5143Open in IMG/M
3300026551|Ga0209648_10002240All Organisms → cellular organisms → Bacteria15959Open in IMG/M
3300026551|Ga0209648_10501445All Organisms → cellular organisms → Bacteria → Acidobacteria704Open in IMG/M
3300026552|Ga0209577_10445247All Organisms → cellular organisms → Bacteria → Acidobacteria906Open in IMG/M
3300026802|Ga0207511_100032All Organisms → cellular organisms → Bacteria37073Open in IMG/M
3300027681|Ga0208991_1149220All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300027748|Ga0209689_1303274All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300027787|Ga0209074_10389940All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300027815|Ga0209726_10120391All Organisms → cellular organisms → Bacteria → Acidobacteria1532Open in IMG/M
3300027862|Ga0209701_10068860All Organisms → cellular organisms → Bacteria2242Open in IMG/M
3300028381|Ga0268264_10111773All Organisms → cellular organisms → Bacteria → Acidobacteria2394Open in IMG/M
3300031538|Ga0310888_10144146All Organisms → cellular organisms → Bacteria → Acidobacteria1263Open in IMG/M
3300031908|Ga0310900_10976209All Organisms → cellular organisms → Bacteria → Acidobacteria695Open in IMG/M
3300032012|Ga0310902_10222991All Organisms → cellular organisms → Bacteria → Acidobacteria1120Open in IMG/M
3300032013|Ga0310906_11198336All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300032205|Ga0307472_102014456All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil21.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.22%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.22%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.48%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.48%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.61%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.74%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.74%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.74%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.87%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.87%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.87%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.87%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.87%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.87%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.87%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.87%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.87%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.87%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003228Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-CEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011401Attine ant fungus gardens microbial communities from Georgia, USA - TSGA068 MetaGHost-AssociatedOpen in IMG/M
3300011436Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012390Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012493Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015078Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11a, vegetated hydrological feature)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015252Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10DEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300024275Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026802Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-C (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI26300J46817_10072113300003228SoilMDVSCPSLPPKILVRNETDAELRLNAQTTAFMAAHGCHLSTGCLFVLLVIIESFFLAVRDTMIARTVLYKVSIAIVSRSFLRKTITAASILFD*
Ga0062589_10220733623300004156SoilRLSMDVSCPSLPPKILVADKVRPNEQTTIYMTAHGCRLSTGCLFVLLVIIESFFLAVRNHMIARTVLYKV*
Ga0062590_10038241933300004157SoilMDVSCPSKPPKILAADKVRPNEQTTVYMAALGCHFIECSLFILPVIIEVFFLMVRESLIARTCLYKLSIAMVSRTFLKKVIDRFGFPNSAGRCLQKIF*
Ga0062591_10177273523300004643SoilMDVSCPSKPPKILAADKVRPNEQTTLYMAALGCHFIECSLFILPVIIEVFFLMVRESLIARTCLYKLSIAMLSRTFSKKVINRFGFPNSAGRCLQKIF*
Ga0062594_10254599123300005093SoilMDVSCPSKPPKILVADKVRPNEQTTLYMAALGCHFIECSLFMPVIIEVFFLIVRDSLIARTCLYKLSIAMMSRTF*
Ga0066679_1105174023300005176SoilMDASCPSLPPKILVRNETDAELRSNAQTTIYMAAHGCHLSTGCLFVLLVIIESFFLAVRDQSFARTLLYKVSIAIVSR*
Ga0066690_1072124413300005177SoilMDASCPSLPPKTLVADKLRPNAQTTAFMAAHGCHFVECFWYVLLVIIESFFLAVREPMIARTLLYKVSIAIVSRS
Ga0066685_1111324213300005180SoilMDASCPSLPPKILVADKVRPNEQTTVYMAAHGCHFVECCLFVLLVIIESFFLAVRNHVIAPTVLYKVSMAIVSRSFSTKTDLRTRVRVGFD*
Ga0065704_1001681933300005289Switchgrass RhizosphereMDASCPSLPPKILVRNETDAQLRPNAQTTAFMAAHGCHFVECCLFVLLVIIESFFLAVRDTMIARTVLYKVSIAIVSRSF*
Ga0065705_1004452013300005294Switchgrass RhizosphereMRRLSDVCLPSKPPKILVADKVRPNEQTTLYMAALGCHFIECSLFMPVIIEVFFLIVRDSLIARTCLYKLSIAMMSRTF*
Ga0066388_10590050813300005332Tropical Forest SoilMDRACPSRSSKSFVGNELRPNEQTTIDMAAHGCHFVECFWYVLLVNIEGFFLTVRDWSIARTLLYKVSIAIVSRSFYEK*
Ga0068869_10052805913300005334Miscanthus RhizosphereMDVSCPSLPPKILVADKVRPNEQTTIYMTAHGCRLSTGCLFVLLVIIESFFLAVRDTMIARTVLYKVSIAIVSRSFLRKTITAASILFD*
Ga0070675_10100887323300005354Miscanthus RhizospherePSLPPKILVADKVRPNEQTTIYMTAHGCRLSTGCLFVLLVIIESFFLAVRNHMIARTVLYKV*
Ga0070707_10008330743300005468Corn, Switchgrass And Miscanthus RhizosphereMDASCPSLPPKILVADKVRPNEQTTVYIAAHGCHFVECFWYVLLVIIESFFLAVRDTMIARALLYKVSIAIVSRSF*
Ga0070697_10156334013300005536Corn, Switchgrass And Miscanthus RhizosphereETDAELRLNAQTTALMAAHGCHLSTGCLFVLLVIIESVFLAVRNHLIARTVLYKVSIAIVSRSF*
Ga0070704_10024424413300005549Corn, Switchgrass And Miscanthus RhizosphereRESAPADYCLIRRLSMDVSCPSLPPKTLVADKVRPNAQTTVYMAAHGCHLSIGCLFVLLIIIESFFLAVRNHVIARALLYKVSIAIVSRSF*
Ga0070704_10128609613300005549Corn, Switchgrass And Miscanthus RhizosphereMDVSCPSKPPKILAADKVRPNEQTTLYMAALGCHFIECSLFMPVIIEVFFLIVRDSLIARTCLYKLSIAMMSRTF*
Ga0066661_1070487413300005554SoilMDVSCPSLPPKILVRNETDAELRPNAQTTAFMAARGCHLSTGCLFVLLVIIESFFLAVRDRGVARTLLYKVSIAIVSRTFSKKPICKHVFALALITLSIG*
Ga0066699_1070289113300005561SoilMDRSCPSLPPKILVADKVRPNEQTTVYMAAHGCHFVECCLFVLLVIIESFFLAVREPMIAQTLLYKVSIAIVSRSF*
Ga0066703_1058849013300005568SoilMDASCPSLPPKILVRNETDAELRPNAQTTAFMAAHGCHLVECFWYVLLVIIESFFLAVRDSGVARTLLYKVSIAIVSRTFSKKPICKHAFALALITLSIG*
Ga0066694_1061914413300005574SoilMDVSCPSLPPKILVPNETDAKLRPNEQTTLYLAAHGCHFVDCSLYVLLVNIESFFLTARDTTIARTLLYKVS
Ga0066702_1076589013300005575SoilMDASCPSLPPKILVADKVRPNEQTTVYMAAHGCHFVECFWYVLLVIIESFFLAVREPMIARTLLYKVSIAIVSRTFSKKPICKHAFALAPITLSIG*
Ga0068860_10008385723300005843Switchgrass RhizosphereMEVSCPSLPPKILVRNETDAELRPNAQTTAFMAAQGCHFVECRLFVLLVIIESFFLAVRNHLIARAVLYKVSIAIVSRSFLRKTITAASILFEQS*
Ga0081539_1002096243300005985Tabebuia Heterophylla RhizosphereMDVSCPSLPPKILVRDETDAEPRPNEQTTGYMAAHGCHFIECSLYVLLVNIESFFLTVRDWSIARTVLYKVSIAIVSRQFFRKTITACSILSVVGALPGPQR*
Ga0066696_1059565713300006032SoilMDVSCPSLPPKILVRNETDAELRPNEQTTAFMAAHGCHLSTGCLFVLLVIIESFFLAVRDTMIARTLLYKVSIAIVSRSFYEH*
Ga0075422_1004191823300006196Populus RhizosphereMDASCPSLPPKILVRNETDAQLRPNAQTTAFMAAHGCHFVECCLFVLLVIIESFFLAVRDPVIARTVLYKVSIAIVSRSF*
Ga0066658_1013409613300006794SoilMDASCPTLPPKILVRNETDAELRLNEQTTVYMAAYGCHLSIGFWYVLLVIIESFFLAVRDAMIARTLLYKVSIAIVSRSFYEH*
Ga0066665_1117259613300006796SoilPKILVADKLRPNAQTTAFMAAHGCHFVVCSLYVLLVIIESFFLAVRESLIARTLLYKASIAIVSRSF*
Ga0066660_1003063313300006800SoilILVRNETDAELRPNAQTTAFMAGHGSHLTTDCLFVLLVIIESFFLAVHDTAVARTLLYKVSIAIVSRTFSKKPICKHAFALALITLSIG*
Ga0066660_1056028423300006800SoilMDASCPSLPPKILVADKVRPNEQTTVYMAAHGCHFVECFWYVLLVIIESFFLALREPMIARTLLYKVSIAIVSRSFSTKTVTAASILFD*
Ga0075436_1000000071823300006914Populus RhizosphereMDVSCPSLPPKILVADELRPNEQTTVYMAAHGCHFVECCLFVLLVIIESFFLAVSDAIVARTFLYKPRPPILSSTFL*
Ga0099793_1070732113300007258Vadose Zone SoilMDASCPSGPPKILVRNETDAKLRPNEQTTVYMAAHGCHFVECCLYVLLVIIESFFLAVRDTMIAQALLYKVSIAIVSRSF*
Ga0099795_1010091043300007788Vadose Zone SoilMDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFIECFLFVLLVIIESFFLAVRDTMIARALLYKVSMAIVSRSFYGKTITAASILFD*
Ga0066710_10028562613300009012Grasslands SoilMDRSCPSLPPKILVADKVRPNEQTTGYMAAHGCHFVECFWYVLLVIIESFFLAVRNHVIARTLLYKVSMAIVSRSFSTKTDLRTRVRVGFD
Ga0066710_10115240513300009012Grasslands SoilMDVSCPSLPPKILVRNETDAELRPNEQTTAYMAAHGGHFVECFWYVLLVIIESFFLAVRDTVIARTVLYKVSMAIVSRSFLRKTIHRSFDTLRLVVSCLTFN
Ga0099829_1079880623300009038Vadose Zone SoilLPPKILVRNETDAELRPNEQTTAYMAADGCHLSIGSRYVLLVNIESFFLTVRNPTIARTLLYKVSIAIVSRTFSQK*
Ga0099829_1171910613300009038Vadose Zone SoilMDVSCPSLPPKILVDNKLRPNAQTTGYMAAHGCHFVECSLFVLVVNIESFFLTVRDCVIARTVLYKVSIVALSRTFSKNNFTTTLSR
Ga0099830_1020471933300009088Vadose Zone SoilMDASCPSLPPKLLIVDKLRPNEQTTAYMAAHGCHFVECFWYVLLVIIESFFLAVRVPMIARTLLYKVSIVTVSRSFYEKQNSEHSLRARFD*
Ga0105245_1036155623300009098Miscanthus RhizosphereETDAEFRLNAQTTAFMAAHGCHLSTGCLFVLLVIIESFFLAVRNWSIARTVLYKVSIAIVSRSFLRKTITAASILFD*
Ga0105245_1313762413300009098Miscanthus RhizosphereETDAEFRLNAQTTAFMAAHGCHLSTGCLFVLLVIIESFFLAVRNWSIARTVLYKVSIAIVSRSFYRKTITAASILFD*
Ga0066709_10033670943300009137Grasslands SoilMDRSCPSLPPKILVADKVRPNEQTTGYMAAHGCHFVECFWYVLLVIIESFFLAVRNHVIARTLLYKVSMAIVSRSFSTKTDLRTRVRVGFD*
Ga0066709_10049481523300009137Grasslands SoilMDVSCPSLPPKILVPNETYAKLRPNEQTTLCLAAHGCHFVDWSLYVLLFNIESFFLTARDTTIARTLLYKVSIAILSRTF*
Ga0126382_1146020023300010047Tropical Forest SoilMDVTCPSLPPKIFDADKVRPNEQTSSYMAAHGCHFIVCSLYVLLVNIEVFFLTVRDWSIARTVLYKLSIAIVSRSFYEQ*
Ga0099796_1010400213300010159Vadose Zone SoilMDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFIECCLFVLLVIIESFFLAVRDTMIARALLYKVSIAIVSRSFYEKSRTRIRARLD*
Ga0134109_1037359313300010320Grasslands SoilMDASCPSLPPKILVADKVRPNEQTTVYMAAHGCHFVECFWYVLLVIIESFFLALREPMIARTLLYKVSIAIVSRSFYEKRSPHVRYFSAYGGLPVFDSLS
Ga0134084_1028760713300010322Grasslands SoilMDASCPSLPPKILVRNETEAELRPNAQTTAFMAAHGCHFVECCLFVLLVIIESFFLAVREPIIARTVLYKVSTAIVSRSFLRT
Ga0134062_1017907823300010337Grasslands SoilMDASCPSLPPKILVADKLRPNAQTTAFMAAHGCHFVVCSLYVLLVIIESFFLAVRESLIARTLFYKVSIAIVSRSFLRKPITAASILFD*
Ga0126372_1096005613300010360Tropical Forest SoilMDVSCPSLPPKILVADKVTPNETTHRFMAAHGCHFIECSLYVLLLSIEVFFLTLRESIIARILLYKVSIAIVSRSFCEKSESHTLSPSL*
Ga0134124_1259310123300010397Terrestrial SoilMDDSCPSLPPKILVADKLRLNEQTTAFMAAHGCHFVECFWYVLLVIIESFFLAVRNWSIARTVLYKVSIAIVSRSFLRKTITAASILFD*
Ga0134122_1074060923300010400Terrestrial SoilMDVSCPSLPPKILVADKPRPNAQTTPFMAAHGCHFVECSLDVRLVIIEVFFLAVRDSGVARTVLYKVSIAIVSRTF*
Ga0134121_1056545033300010401Terrestrial SoilCPSLPPKILVRNETDAELRRNAQTTIYMAAHGCHWSTRRLFVLLVIIEIFFLAVRNHVIARAVLYKVLIAIVSRTFLQKPVTSASIPFRTTQVA*
Ga0134123_1190208113300010403Terrestrial SoilMDVSCPSLPPKILVADKVRPNEQTTVYMAAHGCHFGECFLFVLLIIIESFFLAVRNHVIARAVLYKVSIAIVSRSF*
Ga0137392_1008536123300011269Vadose Zone SoilMDVSCPSLPSKILVANVTGAKLRPNEQTTAYMAADGGHFVECSLYVLLVVIESFFLAVRDTMIARTLLYKVSIAILSRAFSKRIATPSIRLR*
Ga0153984_107536123300011401Attine Ant Fungus GardensMDASCPSLPPKILVADNVRPNEQTTAYMAAHGCHFVECGLFVLLVIIESFFLAVRDTMLARTVLYKVSIAIVSRSF*
Ga0137458_101100843300011436SoilMDASCPSLPPNVLTADKVRSNEQTTEYMAAHGCHFVVCFRYVLLVIIESFFLAVRKTVIARTLLYKVSMAIVSRYF*
Ga0137389_1071279313300012096Vadose Zone SoilLSMDVSCPSLPSKILVRNETDAELRLNEQTTVYMAAHGCHLSIGFWYVLLVIIESFFLAVRDSGERATFLYKVSIAIVSRSFYEKRSPVLRHS*
Ga0137374_1000690153300012204Vadose Zone SoilMDVSCPSLPPKVLVADKLRPNAQTTGCMAARGCHFVECSLFVLLVNIESFFLTVRDSVINRTVFYRVSSAILSRTF*
Ga0137374_1067145623300012204Vadose Zone SoilMDASCPSPPPKILVADKLRPNAQTTAYMAAHGCHFVECFWYVLLVIIESFFLAVREPMIARTLLYKVSIAIVSRTFYEKQNSEHGLRARFD*
Ga0137377_1193555413300012211Vadose Zone SoilDASCPSLPPKILIADKLRPNAQTTAFMAAHGCHFVVCSLYVLLVIIESFFLAVRESLIARTLLYKVSIAIVSRSF*
Ga0137366_1010047923300012354Vadose Zone SoilMDVSCPSLPPKILVADKLRPNAQTTAFMAAHGCHLSTGFWYVLLVIIESFFLAVRDCGGARTLLYKVSIAIVSRSFSQKQLDYPLSRAGFD*
Ga0137360_1020665213300012361Vadose Zone SoilMDVSCPSLPPKILVRNETDAELRPNEQTTAFMAAHGSHFVECSLYVLLVIIESFFLAAREPMIARTLLYKVSIAIVSRTFYVKLRKTESLLLRYS*
Ga0137390_1081135433300012363Vadose Zone SoilMDASCPSLPPKILVADKLRPNEQTTVYMAAHGCHFVECCLFVLLVIIESFFLVVRDTVIARTLLYKVSIAIVSRSFYAKTNRLCFDTLWLAAV
Ga0134054_122261713300012390Grasslands SoilMDASCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFVECFWYVLLVIIESFFLARRTQARAQPSLYKTGPPILSRTFYGK
Ga0134056_114927913300012397Grasslands SoilMDVSCPSLPPKILVPNETDAKLRPNEQTTLYLAAHGCHFVDRSLYVLLVIIESFFLTVRDTTIARTLLYKVSIAILSR
Ga0157355_102137913300012493Unplanted SoilMDRSCPSLPPKILVADKVRPNEQTTAYMAAHGCHFVECCLFVLLVIIESFFLAVRDPMITRTVLYKVSIAIV
Ga0137358_1019573913300012582Vadose Zone SoilMDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFVECFLFVLLVIIESFFLAVRDTMIARTFVYKVSIAIVSRSFYEKSRNVFALAWINSFDR*
Ga0157306_1032615513300012912SoilMDVSCPSKPPKILAADKVRPNEQTTLYMAALGCHFIECSLFILPVIIEVFFLMVRESLIARTCLYKLSIAMVSRTFLKKVIDRFGFPNSAGRCLQKIF*
Ga0137395_1060016813300012917Vadose Zone SoilMDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFVECCLYVLLVIIESFFLAVRESVIARTLLYKVSIAIVSRSF*
Ga0137416_1134889913300012927Vadose Zone SoilMDASCPSLPPKILVADKLRPNEQTTVYMAAHGRHFVECFWYVLLVIIESFFLAVRDTMIARTLLYKVSIAIVSRSFYEKRSPVLRHS*
Ga0137416_1191735313300012927Vadose Zone SoilMDVSCPSVPPKILVADKVRPNAQTTAFMAAHGCHFVECFLYVLLVIIEIFFFAVRDTMIARALLYKVSIVIVSRSFSKKSRTRIRVRLD*
Ga0137404_1012244173300012929Vadose Zone SoilMDVSCPSLPPKILVADKLRLNAQTTVYMAAHGCHLSTGRLYVLFVIIEIFFLAVRNHVMARTVLYKVSMAIVSRSFYEKSRTPIRARLD*
Ga0137404_1060979423300012929Vadose Zone SoilMDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFVECFLFVLLVIIESFFLAVRDTMIARALLYKVSIAIVSRSFYEKSRTRIRARLD*
Ga0137407_1129364523300012930Vadose Zone SoilMDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHLSTGFLFVLLVIIESFFLAVRDTMIARALLYKVSIAIVSRSFYEKSRTRIRARLD*
Ga0164298_1078786113300012955SoilMDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFVECCLFVLLVIIESFFLAVRNWSIARTVLYKVSIAIVSRSF*
Ga0157371_1099351413300013102Corn RhizosphereMLVPDNVRPSEQTTAYMAAHGCHFVECCLFVLLVIIESFFLAVRDTMIARTVLYKVSIAIVSRSFEKKIAARSILPSVLRVASL*
Ga0157375_1201344013300013308Miscanthus RhizosphereMDVSCPSLPPKILVADKLRLNEQTTAFMAAHGCHFVKCFWYVLLVIIESFFLAVRNWSIARTVLYKVSIAIVSRSFLRKTITAASILFD*
Ga0120125_115877223300014056PermafrostMDVSCPSLPPNILVRNETDAELRPNEQTTAFMAAHGCHLVECFWYVLLVIIESFFLAVRNAIVARTFLYKVSMAIVSRSF*
Ga0134081_1005292543300014150Grasslands SoilMDASCPSLPPKILVRNETDAELRPNAQTTAFMAAHGCHFVVCSLYVLLVIIESFFLAVRDTVIARTLLYKVSIAIVSRSFLENESPQLRYSSTSRELPDIQLTW
Ga0167660_100306043300015078Glacier Forefield SoilMDASCPSLPPKILVADKVRPNEQTTVHMAAHGCHFVECSLYVLLVVIESIFLAVRESVIARTVLYKVSMAIVSRSFYRKTIADASTLSWCRGLLGIQRT*
Ga0137412_1017851093300015242Vadose Zone SoilMDVSCPSLPPKILDRNEIDAGLRPNEQTTAYMAAHGCHFVECFLFVLLVIIESFFLAVRDTMIARALLYKVSIAIVSRSFYEKSRTRIRARLD*
Ga0180075_108541513300015252SoilMDVSCPSLPPKILVRNETDAKLRPNEQTTVYMAAHGCHFVECFWYVLLVIIESFFLAVRDSGVARTLLYKVSMANVSRSFYEKTITAASIR
Ga0137403_1001589113300015264Vadose Zone SoilSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFVECFLFVLLVIIESFFLAVRDTMIARALLYKVSIAIVSRSFYEKSRTRIRARLD*
Ga0134073_1030575223300015356Grasslands SoilMDVSCPSLPPKILVRNETDAELRLNAQTTVYMAAHGCHFIECCLFVLLVIIESFFLAVRDTMIARTVLYKVSI
Ga0163161_1165288023300017792Switchgrass RhizosphereYCLIRRLSMDASCPSLPPKILVADNVRPNEQTTGYMAAHGCHFVECCLFVLLVIIESFFLAVRDAMIARTVLYKVSIAIVSRSFPENLPVEKIFL
Ga0184605_1050512413300018027Groundwater SedimentMDASCPSLPPKILVADKVRPNEQPTVYMAAHGCHFVECFWYVLLVIIESFFLAVRDTMIARTLLYKVSIAIVSRSFYEKQSPTL
Ga0184619_1012739513300018061Groundwater SedimentMDASCPSLPPKILVRNETDAELRPNVQTTVYMAAHGCHFVECFWYVLLVIIESFFLAVREPIVARTLLYKVSIAIVSRSF
Ga0193725_112537313300019883SoilMDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHLSTGFWYVLLVIIESFFLAVRDCGVARTLLYKVSIAIVSRSFL
Ga0193749_100818113300020010SoilMDASCPSLPPKILVADKLRPNAQTTEYMAAHGCHLSTGCLFVLLVIIESFFLAVRDTMIARTVLYKVSVAIVSRSFYKNDRCCFDTLELVWVA
Ga0179594_1001151133300020170Vadose Zone SoilMDVSCPSVPPKILVADKVRPNAQTTAFMAAHGCHFVECFLYVLLVIIEIFFFAVRDTMIARALLYKVSIVIVSRSFYEKSRTRIRARLD
Ga0247664_101894013300024232SoilMDVSCPSLPPKILTADKVRPNAQTTAFMAALGCHFVECFWYVLLVIIESLFLAVRDTMIARAFLYKVSIAIVSRTFYCKVDAKSRVHSD
Ga0247674_101992733300024275SoilMDVSCPRLPPKILVRNETDAEPRPNAQTTIYMAAHGCHFVECFWYVLLVIIESFFLAVRDTMIARAFLYKVSVAILSRTFYCKV
Ga0207699_1031966133300025906Corn, Switchgrass And Miscanthus RhizosphereMDVSCPSLPPKILVADKVRPNEQTTVYMAAHGCHFVECFLYVLLVIIESFFLAVRDPMIARAVLYKVSIAIVSRSFYE
Ga0207660_1031355413300025917Corn RhizosphereMDVSCPSKPPKILAADKVRPNEQTTLYMAALGCHFIECSLFILPVIIEVFFLMVRESLVARTCLYKLSIAMVSRTFSKKVIDRFGFPNSAGRCLQKIF
Ga0207646_1005359443300025922Corn, Switchgrass And Miscanthus RhizosphereMDASCPSLPPKILVADKVRPNEQTTVYIAAHGCHFVECFWYVLLVIIESFFLAVRDTMIARALLYKVSIAIVSRSF
Ga0207687_1035235523300025927Miscanthus RhizosphereMDVSCPSLPPKILVRNETDAEFRLNAQTTAFMAAHGCHLSTGCLFVLLVIIESFFLAVRDTMIARTVLYKVSIAIVSRSFL
Ga0207701_1106360913300025930Corn, Switchgrass And Miscanthus RhizosphereMDVSCPSLPPKILVRNETDAELRPNAQTTAFMAAHGCHFVECCLFVLLVIIESFFLAVRDPVIARTVLYKVSIAIVSRSF
Ga0207712_1143157513300025961Switchgrass RhizosphereKILVRNETDAELRPNAQTTAFMAAHGCHFVECCLFVLLVIIESFFLAVRDPMSARTVLYKVSIAIVSRSF
Ga0209268_116541013300026314SoilMDVSCPSLPPKILVPNETDAKLRPNEQTTLYLAAHGCHFVDCSLYVLLVNIESFFLTARDTTIARTLLYKVSIAIVSRSFYEKPITLLRYVLARRSCL
Ga0209807_116241623300026530SoilMDASCPSLPPKILVADKLRPNAQTTAFMAAHGCHFVVCSLYVLLVIIESFFLAVRESLIARTLLYKVSIAIVSR
Ga0209474_1002035153300026550SoilMDVSCPSLPPKILVRNETDAELRPNEQTTAFMAAHGCHLSTGCLFVLLVIIESFFLAVRDTMIARTLLYKVSIAIVSRSFYEH
Ga0209648_10002240193300026551Grasslands SoilMDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFVECFWYVLLVIIESFFLAVRDATLARTLLYKVSIAIVSRSFSKNNL
Ga0209648_1050144513300026551Grasslands SoilMDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFVECFWYVLLVIIESFFLAVREPMIARTLLYKVSIAILSRSFLRKTIAAASILFY
Ga0209577_1044524743300026552SoilMDASCPSLPPKILVADKVRPNEQTTVYMAAHGCHFVECFWYVLLVIIESFFLALREPMIARTLLYKVSIAIVSRSFSTKTDHRCFDTLRLGVS
Ga0207511_100032373300026802SoilMDVSCPSLPPKILVRNETDAELRLNAQTTAFMAAHGCHLSTGCLFVLLVIIESFFLAVRDTMIARTVLYKVSIAIVSRSFLRKTITAASILFD
Ga0208991_114922013300027681Forest SoilMDVSCPSLPPKILVPNETDARLRLDEQTIAYMAAHGCHFVECFWYVLLVIIESFFLAVRDTMIARTLLYKVSIAIVSRS
Ga0209689_130327413300027748SoilMDASCPTLPPKILVRNETDVELRLNVQTTAYMAARGCHLSTGCLFVLLVIIESFFLAVRDRGVARTLLYKVSIAIVSRTFSKKPICKHAFALALITLSIG
Ga0209074_1038994013300027787Agricultural SoilMDVSCPSLPPKILVADKVRPNEQTTVYMAAHGCHFVECCLFVLLVIIESFFLAVRESMIARTFLYKVSIAIVSRSFLRKRSPHLRYLQVRKE
Ga0209726_1012039113300027815GroundwaterMDVSCPSLPPKILVRNETDAELRPNEQTTVYMAAHGCHFVECFWYVLLVIIESFFLAVRDSGVARTLLYKVSMAIVSRSFYKKLIAAASIRFSSPQLPVISSS
Ga0209701_1006886033300027862Vadose Zone SoilMDASCPSLPPKLLIVDKLRPNEQTTAYMAAHGCHFVECFWYVLLVIIESFFLAVRVPMIARTLLYKVSIVTVSRSFYEKQNSEHSLRARFD
Ga0268264_1011177323300028381Switchgrass RhizosphereMEVSCPSLPPKILVRNETDAELRPNAQTTAFMAAQGCHFVECRLFVLLVIIESFFLAVRNHLIARAVLYKVSIAIVSRSFLRKTITAASILFEQS
Ga0310888_1014414613300031538SoilMRRLSDVCLPSKPPKILVADKVRPNEQTTLYMAALGCHFIECSLFMPVIIEVFFLIVRDSLIARTCLYKLSIAMMSRTF
Ga0310900_1097620913300031908SoilPADYCLIRRLSMDVSCPSLPPKILVRNETDAQLRPNAQTTAFMAAHGCHFVECCLFVLLVIIESFFLAVRDPVIARTVLYKVSIAIVSRSF
Ga0310902_1022299113300032012SoilMDVSCPSKPPKILAADKVRPNEQTTLYMAAPGCHFIECSLFILPVIIEVFFLMVRESLIARTCLYKLSIAMMSRTF
Ga0310906_1119833613300032013SoilMDVSCPSKPPKILAADKVRPNEQTTLYMAALGCHFIECSLFILPVIIEVFFLIVRDSLIARTCLYKLSIAMMSRTF
Ga0307472_10201445613300032205Hardwood Forest SoilSMDASCPSLPPKILVADNVRPNAQTTAFMAAHGCHFVECCLFVLLVIIESFFLAVRDTMIARTVLYKVSIAIVSRSFYEK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.