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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F080228 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 115 |
| Average Sequence Length | 70 residues |
| Representative Sequence | MADAPAPHHALVMQFVAALLQRTLGCPTVEAHQHALQGFLDDLTPWITPVELPTLLEQPFTLFDHLA |
| Number of Associated Samples | 80 |
| Number of Associated Scaffolds | 115 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 84.96 % |
| % of genes near scaffold ends (potentially truncated) | 92.17 % |
| % of genes from short scaffolds (< 2000 bps) | 96.52 % |
| Associated GOLD sequencing projects | 74 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.47 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (82.609 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (24.348 % of family members) |
| Environment Ontology (ENVO) | Unclassified (36.522 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (50.435 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 50.53% β-sheet: 0.00% Coil/Unstructured: 49.47% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.47 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 115 Family Scaffolds |
|---|---|---|
| PF05670 | NFACT-R_1 | 24.35 |
| PF07690 | MFS_1 | 6.09 |
| PF01315 | Ald_Xan_dh_C | 1.74 |
| PF13565 | HTH_32 | 0.87 |
| PF00011 | HSP20 | 0.87 |
| PF03400 | DDE_Tnp_IS1 | 0.87 |
| PF00872 | Transposase_mut | 0.87 |
| PF04751 | DUF615 | 0.87 |
| PF03811 | Zn_Tnp_IS1 | 0.87 |
| PF04002 | RadC | 0.87 |
| COG ID | Name | Functional Category | % Frequency in 115 Family Scaffolds |
|---|---|---|---|
| COG1293 | Ribosome quality control (RQC) protein RqcH, Rqc2/NEMF/Tae2 family, contains fibronectin-(FbpA) and RNA- (NFACT) binding domains | Translation, ribosomal structure and biogenesis [J] | 24.35 |
| COG0071 | Small heat shock protein IbpA, HSP20 family | Posttranslational modification, protein turnover, chaperones [O] | 0.87 |
| COG1662 | Transposase and inactivated derivatives, IS1 family | Mobilome: prophages, transposons [X] | 0.87 |
| COG2003 | DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif | Replication, recombination and repair [L] | 0.87 |
| COG3028 | Ribosomal 50S subunit-associated protein YjgA, DUF615 family | Translation, ribosomal structure and biogenesis [J] | 0.87 |
| COG3328 | Transposase (or an inactivated derivative) | Mobilome: prophages, transposons [X] | 0.87 |
| COG3677 | Transposase InsA | Mobilome: prophages, transposons [X] | 0.87 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 82.61 % |
| All Organisms | root | All Organisms | 17.39 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 24.35% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 18.26% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 15.65% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 11.30% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 6.09% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 6.09% |
| Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 2.61% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.61% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.74% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.74% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.74% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.74% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.74% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.87% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.87% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.87% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.87% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.87% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
| 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
| 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
| 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
| 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
| 3300006194 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 | Host-Associated | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300006853 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4 | Host-Associated | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
| 3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
| 3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
| 3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
| 3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
| 3300009809 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 | Environmental | Open in IMG/M |
| 3300009813 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 | Environmental | Open in IMG/M |
| 3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
| 3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010142 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
| 3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012206 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG | Environmental | Open in IMG/M |
| 3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
| 3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
| 3300012355 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG | Environmental | Open in IMG/M |
| 3300012357 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG | Environmental | Open in IMG/M |
| 3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012918 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG | Environmental | Open in IMG/M |
| 3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
| 3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
| 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027646 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes) | Environmental | Open in IMG/M |
| 3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027874 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes) | Environmental | Open in IMG/M |
| 3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027961 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes) | Environmental | Open in IMG/M |
| 3300028587 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3 | Environmental | Open in IMG/M |
| 3300031768 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22 | Environmental | Open in IMG/M |
| 3300031805 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23 | Environmental | Open in IMG/M |
| 3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
| 3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
| 3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
| 3300034662 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034666 | Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| Ga0066395_104915851 | 3300004633 | Tropical Forest Soil | MAADQAPSHVLVMQFVAALLQRTLGCRTDEAHQQALQGFLDDLTPWITPVELPTLLGQPFMLFDHLAFTPNGDGDDEDVQVALSPG |
| Ga0066388_1005109813 | 3300005332 | Tropical Forest Soil | MAHAPAPHHALVMQFVAALLQRTLDCPTVEAHQHALQGFLDDLTPWITPVVSAVA* |
| Ga0066388_1013346693 | 3300005332 | Tropical Forest Soil | MAADQAPSHVLVVQFVAALLQRTLGCPTAEAHQHALQGFLDDLTPWISPADLPTLLEQPF |
| Ga0066388_1017109082 | 3300005332 | Tropical Forest Soil | MAADQAPSHVLVMQFVVALLQRTLGCWTDEAHQQALQGFLDDLTPWITPVELPTLLGQPFMLFDHL |
| Ga0066388_1022834353 | 3300005332 | Tropical Forest Soil | MADASAPHHTLVMQCVAALLQRTLGCPTVEAHQHALQGFLDDLTPWITPVELPTRFCRKSPKIGKLIRTNH* |
| Ga0066388_1062218351 | 3300005332 | Tropical Forest Soil | MAADQAPSHVLVMQFVAALLQRTLGCRTDEAHQQALQGFLDDLTPWITPVELPTLLGQPFMLFDHL |
| Ga0070687_1010849392 | 3300005343 | Switchgrass Rhizosphere | MAADQAPSHVLVMQFVAALLQRTLGCPTVEAHQQALQGVLDDLTPWISPADLPTLLAQ |
| Ga0070708_1001807733 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MADAPAPHHTLVLQFVAALLQRTLGCLTAEAHQHALQDFLDDLTPWISPADLPTLVQ* |
| Ga0070706_1015802352 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MPADQAQPHALVFQFVGALLQRTLDCLTVEAHQQALQGFLDDLTPWLSPADLPTLLGQPFTLFDHLAFT |
| Ga0070698_1013829972 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MPADQAQPHALVFQFVGALLQRTLDCLTVEAHQQALQGFLDDLTPWLSPADLPTLLGQPFTLFDHLAFTPNGTDGDE |
| Ga0070698_1017199512 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MGEDRSLHDALVFQFLGALLKRTLDCPTVETHQQALQSFLDDLTPWLSPADLPTLLGQPFTLFDHLAFTPNGTD |
| Ga0070699_1016425021 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MAETHSPQHALVFPFVGALLQRTLDCPTVAAHQQALQGFLDDLTPWLSPADLPTLLGQPFTLFDHLAFTPNGTD |
| Ga0070704_1006835451 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MAHAPAPHHALVMQFVAALLQRTLDCPTVEAHQHALQGVLDALTPWITPVELPTLLAQPFTLFDDLAFTPRGDGD |
| Ga0070664_1018601181 | 3300005564 | Corn Rhizosphere | MADAPAPHHALVMQFVAALLQRTLGCPTVEAHQHALQGFLDDLTPWITPVELPTLLEQPFTLFDHLAFTPHGDGDDEDVQVAL |
| Ga0066905_1017676121 | 3300005713 | Tropical Forest Soil | MAAAPAPHHALMMQFVAVLLQRTLGCSTVEAHQHALQGFLDDLTPWLRPVDLPTLLGQPFTLFDHLAFTPNG |
| Ga0066903_1030458432 | 3300005764 | Tropical Forest Soil | MQFVAALLQRTLGCPTVAAHQQALQGFLDDLTPWISPVKLPTLLEQPFTLFDHLALTPRGDDDEDV* |
| Ga0066903_1077966161 | 3300005764 | Tropical Forest Soil | MANAPAPHHALVMQFVAALLQRTLGCPTVAAHQQALQGFLDDLTPWMNPMELPTLLKQP |
| Ga0066903_1078934941 | 3300005764 | Tropical Forest Soil | MAEAPAPHYALVMRFVAALLQRTLDCPTVEAHQHALQGFLDDLTPWITPVELPTLLEQPFTLFDHLAFTPNGDGDDED |
| Ga0066903_1090449201 | 3300005764 | Tropical Forest Soil | MAAYRSPHYELLCQFLGALLQRTVDCPTVEAHQQALQGFLDDLTPWVSPADLPTLLGPPFTLFDH |
| Ga0068860_1016356641 | 3300005843 | Switchgrass Rhizosphere | MAHAPAPHHALVMQFVAALLQRTLDCPTVEAHQHALQGFLDELTPWISPVDLPTLVQQPFAL |
| Ga0068862_1026905222 | 3300005844 | Switchgrass Rhizosphere | MAHAPAPHHALVMQFVAALLQRTLDCPTVEAHQHALQGVLDALTPWITPVELPTLLA |
| Ga0075427_101093742 | 3300006194 | Populus Rhizosphere | MADAQASHHTLVVQFVAALLQRTLGCSTVEAHQQALHGFLDDLTPWINPVEIPTLLEQPFALFDHLAFTPRGDDDENV |
| Ga0075421_1020677312 | 3300006845 | Populus Rhizosphere | MADAPAPHALVMQFVAALLQRTLGCPTVEAHQHALQSFLDDLRPWITPVELPTLLKQPFTLFDHLAFIPHG |
| Ga0075433_108344042 | 3300006852 | Populus Rhizosphere | MAADQAPSHVLVVQFVAALLQRTLGCPTVEAHQHALQGFLDDLTPWINPVELPTLLEQPF |
| Ga0075420_1008080532 | 3300006853 | Populus Rhizosphere | MADAPAPHHALVMQFVAALLQRTLDCPTVEAHQHALQGFLDELTPWISPVDLPTLVQQPFALFDHLAFTPRGDDDEDVWVALSP |
| Ga0075420_1016696001 | 3300006853 | Populus Rhizosphere | MAADQAPSHVLVMQFVAALLQRTLGCRTDEAHQQALQGFLDELRPWISPVELPTLLGQPFMLFDHLAFTPHGDGDNEDVQVALS |
| Ga0075425_1021879492 | 3300006854 | Populus Rhizosphere | MAADQAPSHVLVVQFVAALLQRTLGCLTDEAHEQALQGFLDDLTPWISPAELPTLLEQPFALFDHLAFTPRDDDDQDVWVAL |
| Ga0075429_1018685782 | 3300006880 | Populus Rhizosphere | MADAPAPHHALVMHFVAALHQRTLGCPTIEAHQHALQGFLDELTPWLSPADLPTLLGQPFTLFDHLAFTPNGD |
| Ga0068865_1009163222 | 3300006881 | Miscanthus Rhizosphere | MAADHAPSHVLVVQFVAALLQRTLSCPTAEAHQHALQGFLDDLTPWISPADLPTLLAQPFTVFD |
| Ga0075419_104431601 | 3300006969 | Populus Rhizosphere | MAADQAPSHVLVVQFVAALLQRTLGCLTDEAHQHALQSFLDDLTPWISPAELPTLLEQPFALFDHLAFTPRDDDDQDVWVALSPG |
| Ga0075419_110397383 | 3300006969 | Populus Rhizosphere | MADAQASHHTLVVQFVAALLQRTLGCSTVEAHQQALHGFLDDLTPWINPVEIPTLLEQPFALFDHLAFTPRGDDDE |
| Ga0075435_1017400423 | 3300007076 | Populus Rhizosphere | MADAQASHHTLVVQFVAALLQRTLGCSTVEAHQQALHGFLDDLTPWINPVEIPTLLEQP |
| Ga0099828_102661864 | 3300009089 | Vadose Zone Soil | MAADAPTPHHALVMQFVAALLQRTLGCPTVEAHQHALQGFLDDLTPWINPADLPTLVQQPFALFDHLAFTPRGD |
| Ga0099828_113825211 | 3300009089 | Vadose Zone Soil | MADAPAPHHALVMQFVAALLQRTLGCSTVEAHQHALQGFLDDLTPWLNSADLPTL |
| Ga0099827_113791621 | 3300009090 | Vadose Zone Soil | MTEAHAHPPTLGLQFISALLQRTLNCPTAAAHQQALHGFLDDLTPWLSPADLPTLLEQPFTLFDHLAFAPNGVDGDED |
| Ga0075418_105741241 | 3300009100 | Populus Rhizosphere | MADAQASHHTLVVQFVAALLQRTLGCSTVEAHQQALHGFLDDLTPWINPVEIPTLLEQPFALFDHLAFTPRG |
| Ga0075418_117031532 | 3300009100 | Populus Rhizosphere | MANAPAPHHALVMHFVAALLQRTLGRPTVEAHQQALQGFLDDLTPWISPAELPTLLEQPFTLFDHLAFTPYGDGDD |
| Ga0099792_107948762 | 3300009143 | Vadose Zone Soil | MADAPAPHHALVMQFVAALLQRTLGCPTVEAHQHALQGFLDDLTPWLNPADLPTLLGQPFTLCDHLAFTPNGDGDDEDM |
| Ga0114129_104705213 | 3300009147 | Populus Rhizosphere | MQFVAALLQRTLGCPTVETHQQALQGFLDDLTPWISPLELPTLLEQPFTLFDHLAL |
| Ga0075423_115627791 | 3300009162 | Populus Rhizosphere | MQFVAALLQRTLSCPTVEAHQHALQGFLDDLTPWITPVELPTLLEQPFTLFDHLAFTPYGDGDDEAMTVALSPGGA |
| Ga0075423_124111051 | 3300009162 | Populus Rhizosphere | MANAPAPHHALVMHFIAALLHRTLGCPTLEAHQHALLGFLDELTPWISPAELPMLVQQPFALFDHLAFTPH |
| Ga0126374_106190002 | 3300009792 | Tropical Forest Soil | MHFVAALLQRTLGCRTDEAHQHALQGFLDDLTPWISPAEHPTLLARPFTVFDH |
| Ga0105089_10894451 | 3300009809 | Groundwater Sand | MAADAPTPHHALVMQFVAALLQRTLGCPTVEAHQHALQGFLDDLTPWINPVELSTLLEQPFTLFDHLAFTPRCDDDEDLWVALSPGG |
| Ga0105057_10387962 | 3300009813 | Groundwater Sand | MQFVAALLQRTLGCPTVEAHQHALQGFLDDLTPWINPVELPTLLEQPFTLFDHLAFTPRGDDDENVWVALSPGGEI |
| Ga0126380_112393891 | 3300010043 | Tropical Forest Soil | MAEAPAPHHALVIQFIAALLQRTLGCPTVEAHQQALQGFLDDLTPWMNPVELPTLLTSRSPSLTTSR* |
| Ga0126380_115681952 | 3300010043 | Tropical Forest Soil | MADAPAPHHALVMQFVAALLQRTLDCPTVEAHQHALQRFLDDLTPWISPAELPTLVQQPFALFDHLAFTPHDDGD |
| Ga0126384_101396041 | 3300010046 | Tropical Forest Soil | MAADQAPSHVLVVQFVAALLQRTLDCPTDEAHQHALQGFLDDLTPWISPADLPTLLEQPFTLFEH |
| Ga0126382_120145341 | 3300010047 | Tropical Forest Soil | MHFIAALLQRTLGCPTLEAHQQALQGFLDDLTPWISPVELPTLLEQPFTLFDHL |
| Ga0126382_124890441 | 3300010047 | Tropical Forest Soil | MADAPAPHHALVMHFVAALLQRTLGCRTDEAHQHALQGFLDDLTPWLAPVELPTLLEQPFTLFDHLAFTPNGDGDDEDVQVRPESAI* |
| Ga0127483_10933561 | 3300010142 | Grasslands Soil | MAADAPTPHHALVMQCVAALLQRTLGCPTVEAHQHALQGFLDDLTPWPNSADLPTLLGQPFTLFDHLAFTPNGDG |
| Ga0126370_114357702 | 3300010358 | Tropical Forest Soil | MQFVAVLLQRTLGCSTVEAHQHALQGFLDDLTPWLRPVDLPTLLGQPFTLFDHLAFTPNGDGDDEDVQVALSPGGEVV |
| Ga0126376_104833442 | 3300010359 | Tropical Forest Soil | MQFVAVLLQRTLGCPTVKAHQHALQGFMDELTPWISPADLPTLLGQPFTLFDHL |
| Ga0126376_109434331 | 3300010359 | Tropical Forest Soil | MQFVAALLQRTLGCPTDEAYQHALQGFLDDLRPWISPAEHPTLLARPFTVFDHLAFTPYGESDDEDIS |
| Ga0126376_111446551 | 3300010359 | Tropical Forest Soil | MAEAPAPHHALVMQCIAALLQRTLGCSTLEAHQQALQGFLDDLTPWITPVELPTLLEQPFTLFDHLAFTPH |
| Ga0126376_113911291 | 3300010359 | Tropical Forest Soil | MAEAPAPHHALVMEFVAALLQRTLGCRTDEAHQQALQGFLDDLTPWITPVELPTLLEQPFTL |
| Ga0126376_115224571 | 3300010359 | Tropical Forest Soil | MAADQAPSHVLVVQFVAALLQRTLGCPTDEAHQQALQGFLDDLTPWITPVELPPLLEQPFTLFDHLAFTPHGDGDDEDVQVALSPG |
| Ga0126376_117331531 | 3300010359 | Tropical Forest Soil | MAADQAPSHVLVIQFIAALLQRTLGCATVEAHQQALQGFLDDLTPWSTPVELPTLLEQSFTLFDHLAF |
| Ga0126376_132620501 | 3300010359 | Tropical Forest Soil | MTDAPAPHHTLVCQFVAALLQRTLGCPTVEAHQHALHGFLDDLTPWIAPVELPTRLEQPFTLFDHLAFTPNGVEGDED |
| Ga0126372_104638672 | 3300010360 | Tropical Forest Soil | MQFIAARGQRTLGCPTVEAHQEALQGFLDDLTPWINPVELPTLPEQPFALFDHLAFTPNGDGDDGDMTVALS |
| Ga0126372_117726801 | 3300010360 | Tropical Forest Soil | MADAPAPHHALVMQFVAALLQRTLGCLTDEAHQHALQGFLDELTPWLRPADLRTLRGQPFTLFDHLAFTPN |
| Ga0126372_131893221 | 3300010360 | Tropical Forest Soil | MADEQAPHHALLLQFLCALLQRTVDCPTVAAHQQALQGFLDDLTPWINPVEFPTLLEQPFTPFDHLAFTPIGVEGE |
| Ga0126377_105275581 | 3300010362 | Tropical Forest Soil | MHFIAALLQRTLGCPTLEAHQQALQGFLDELTPWISPAEHPTLLAQPFTLFDHLAFTPRGDDEDVS |
| Ga0126377_109991171 | 3300010362 | Tropical Forest Soil | MAEAPVPHHALVMQLVAVLLQRTLGCSTVEAHQHTLQGFLDDLTPWISPMELPTLLAQPFTLFDDLAFTPRGDGDEDIAVALSPGG |
| Ga0126377_133088201 | 3300010362 | Tropical Forest Soil | MADAPAPHHTLVMQFVAALLQRTLGRPTVEAHQQALQGFLDDLTPWISPADLTTLLAQPFTVFDHLTFAPHGESDDED |
| Ga0126379_116247932 | 3300010366 | Tropical Forest Soil | MQFVAALLQRTLGCSTVEAHQHALQGFLDDLTPWLRPADLPTLLGQPF |
| Ga0126379_121521322 | 3300010366 | Tropical Forest Soil | MADASAPHHTLVMQCVAALLQRTLGCPTVEAHQHALQGFLDDLTPWITPVELSIWFCRKS |
| Ga0126383_112527212 | 3300010398 | Tropical Forest Soil | MVEAPALHHALVLPCIAALLQRTLGCSTVEAHQQALQGFLDDLTPWITPVELPTLLEQPFTLFDHLAFT |
| Ga0126383_119055371 | 3300010398 | Tropical Forest Soil | MADAPAPHHALVMQFVAALLQRTLGCPTVEAHQQALQGFLDDLTPWMNPVELPTLLTSRSPSLTTSR* |
| Ga0137389_110447081 | 3300012096 | Vadose Zone Soil | MAADAPTPHHALVMQFVAALLQRTLGCPTVEAHQHALQGFLDDLTPWISPVELPTLLEQPFTLFDYLAFTPNG |
| Ga0137388_109041242 | 3300012189 | Vadose Zone Soil | MADTHAPHHALVMQFVAALLQRTLGCPTVEAHQHALQGFLDDLASWLSPVDLPTLLGQPFTFFDHLAFTPNGDGDDEDMTVALSP |
| Ga0137362_107754261 | 3300012205 | Vadose Zone Soil | MSEAHAPHHTLVLQFVCALLQRTLHCPTAAAHQQALHGFLDDLTPWLSPADLPTLLEQPFTLFDHLAFTPNG |
| Ga0137380_109874742 | 3300012206 | Vadose Zone Soil | MAEAPAPHHALVMQFVAALLQRTLSCPTVEAHQQALQGFLDDLTLWISPVELPTLLEQPCTLFDHLTFTPNGDGDDED |
| Ga0137380_113995392 | 3300012206 | Vadose Zone Soil | MADAHAPHHTLVFQCVAALLQRTLDCPTVEAHQQALHGFLDDLTPWRSPADLPMLLGQALTFFDHLAFTPNGDGDDED |
| Ga0137381_106965642 | 3300012207 | Vadose Zone Soil | MAEAPAPHHALVMQFVAALLQRTLGCPTVEAHQQALQGFLDDLTPWINPVELPTLLEQPFTL |
| Ga0137378_110040511 | 3300012210 | Vadose Zone Soil | MADAPAPQHTLVFQFVAALLKRTLDCPTVEAHQQALQGFLEDLTPWLSPADLPLLLGQPFTLF |
| Ga0137369_104564861 | 3300012355 | Vadose Zone Soil | VLSPLEDIITGKGRPTMGDALAPHHALVMQCVAALLQRTLGCPTDEAHQHALQGFLDDLTPWINPVELPTLLEQPFALFDHLAF |
| Ga0137384_108853611 | 3300012357 | Vadose Zone Soil | MADAQASHHTLVVQFVAALLQRTLGCPTVEAHQHALQGFLDDLTPWLSPADLPTLLG* |
| Ga0137360_105436541 | 3300012361 | Vadose Zone Soil | MADAQASHHTLVMQFVAALLQRTLSCPTVEAHQQALQGFVDDLTPWISPVELPTLLEQPCTLFDHLAFTPNGDGDDEDIWVALS |
| Ga0137361_110321911 | 3300012362 | Vadose Zone Soil | MAADQAPSHALVLQFVAALLQRTLGCPTVEAHQQALQGFLDDLTPWISPAEIPMLVQQPFALFDHLAFTPRGDD |
| Ga0137396_104438912 | 3300012918 | Vadose Zone Soil | MADAHAPHHTLVFQFVAALLQRTLDCPTVEAHQQALQGFLDDLTPWISPAEIPMLVQQPFALFAHLAFTPRDDD |
| Ga0137407_108054932 | 3300012930 | Vadose Zone Soil | MADATAPHHALVMQFVATLLQRTLGCQTVEAHQHALQDFLDDLTPWISPTDRPTLVQQPFTLFDHLAFTPRIDDEDVWVALSPG |
| Ga0137410_114191922 | 3300012944 | Vadose Zone Soil | MAADQAPSHALVLPFVAALLQRTLGCPTVEAHQQALQGFLDDLTPWISPAEIPMLVQQPFALCDHLAFTPRGDD |
| Ga0126375_107668591 | 3300012948 | Tropical Forest Soil | MADAPAPHHALVMQFVAALLQRTLGCPTAEAYQHALQGFLDDLTPWISPADLPTLLEQPFTLFDHLAFMPHGG |
| Ga0126375_115134452 | 3300012948 | Tropical Forest Soil | MQFVAALLQRTLGCPTVEAHQQALQGFLDDLTPWIKPVELPTLLEQPFTLFDHLTITPHGDGDDEDVSVALS |
| Ga0126375_116715831 | 3300012948 | Tropical Forest Soil | MADAPAPHALVMQFVAALLQRTLGCATVEAHQQALQGFLDDRSPWLRAVELPPTRQQPFPLFNHL |
| Ga0126369_117781161 | 3300012971 | Tropical Forest Soil | MQFVAALLQRTLGCRTDEAHQQALQGFLDDLTPWISPVELPTLLEQPFTLFDHLAFTPNGNGDDED |
| Ga0163162_133835071 | 3300013306 | Switchgrass Rhizosphere | MADAPAPHHVLVMHFVAALLQRTLGCPTVEAHQHALQGFLDELTPWISPAELPTLVQQPFDLFDHLAFT |
| Ga0157379_102575153 | 3300014968 | Switchgrass Rhizosphere | MAADHAPSHVLVVQFVAALLQRTLSCPTAEAHQHALQGFLDDLTPWISPADLPTLLAQPF |
| Ga0157379_112519322 | 3300014968 | Switchgrass Rhizosphere | MQFVAALLQRTLDCPTAEAHQQALHGFLDALTPWINPVELPTLLAQPFTLFDHL |
| Ga0182035_114815311 | 3300016341 | Soil | MADAPVPHHALVMQFVATLLQRTLGCPTVEAHQQALQGFLDDLTPWITPVELPTLLEQPFTLFDHLAFTPHGDGDDEDITVA |
| Ga0207684_111968371 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MADAHAPHHTLVFQFVGALLQRTLTCPTAAAHQQALHGFLDDLTPWLSPADLPMLLGQPFTLFDHL |
| Ga0207670_118942411 | 3300025936 | Switchgrass Rhizosphere | MQFVAALLQRTLGCPTVAAHQHAVQGFLDDLTPWISPADLPTLLEQPFTVFDHLAFTPHGDGDDEDISVA |
| Ga0207679_120309661 | 3300025945 | Corn Rhizosphere | MADAPAPHHALVMQFVAALLQRTLGCPTVEAHQHALQGFLDDLTPWITPVELPTLLEQPFTLFDHLA |
| Ga0207674_101037314 | 3300026116 | Corn Rhizosphere | MADAPIPQHALVMHFVAALLQRTLGCSTVEAHQHALQGFLDDLTPWISPIELPTFLAQPFTLFDDLA |
| Ga0207675_1001803843 | 3300026118 | Switchgrass Rhizosphere | MAHAPAPHHALVMQFVAALLQRTLGCPTVEAHQQALQGFLDDLTPWISPAESPTLLEQPF |
| Ga0209466_10553772 | 3300027646 | Tropical Forest Soil | MADAPAPHHALVMQFVAALLQHTLGCPTVAAHQHALQGFLDDLTPWMNPMELPTLLKQPFTL |
| Ga0209814_102968731 | 3300027873 | Populus Rhizosphere | MADAQASHHTLVVQFVAALLQRTLGCSTVEAHQQALHGFLDDLTPWINPVEIPTLLE |
| Ga0209465_106139341 | 3300027874 | Tropical Forest Soil | MAADQAPSHVLVMQFVAALLQRTLGCRTDEAHQQALQGFLDDLTPWITPVELPTLLGQPFMLFDHLAFTPNGDGDDEDVQVALSP |
| Ga0209481_103276641 | 3300027880 | Populus Rhizosphere | MAAAPAPHHALVMQFVAALLQRTLGCLTNEAHQHALQGFLDDLTPWISPADLPTLLEQPFTLFDHLAFTPHGDGDDEDI |
| Ga0209382_113784242 | 3300027909 | Populus Rhizosphere | MADARAPHHALVMQFVAALLQRILGCPTVEAHQHALQGFLDDLTPWLNKADLPTLLGQPFMLFDHLAFTPVTTTTRMSRWR |
| Ga0209382_115754381 | 3300027909 | Populus Rhizosphere | MADAPAPHALVMQFVAALLQRTLGCPTVEAHQHALQSFLDDLRPWITPVELPTLLKQPFTLFDHLAFIPHGDDEDIQVAL |
| Ga0209382_117871701 | 3300027909 | Populus Rhizosphere | MAADQAPSHVLVMQFVAALLQRTLGCPTVEAHQQALQGFLDDLTPWINPVELPTLLE |
| Ga0209382_123383401 | 3300027909 | Populus Rhizosphere | MAEAPAPHHALVMQFVAALLQRTLSCPTVEAHQHALQGFLDDLTPWITPVELPTLLEQPFALFDHLAFAPRSD |
| Ga0209853_11610801 | 3300027961 | Groundwater Sand | MTETYAYPPTLVLPFVCALLQRTLNCPTAAAHQQALHGFLDDLTPWLRPADLPTLLGQPFTLFDHLAFTPNGVEGD |
| Ga0247828_103251132 | 3300028587 | Soil | MAAAPAPHHALVMQFVAALLQRTLGCLTNEAHQHALQGFLDDLTPWISPADLPTLLEQPFTLFDHLAFTPHGDGDDE |
| Ga0318509_106263091 | 3300031768 | Soil | MAAAPAPHHALVMQFVAALLQRTLGCPTVEAHQQALQGFLDDLTPWMNPVELPTLLEQPFTLFDHLAF |
| Ga0318497_107424401 | 3300031805 | Soil | MAADQAPSHVLVVQFVAALLQRTLGCPTDEAHQHALQGFLDDLTPWISPADLPTLLAQPFTVFDHLAFTPHGAGDDEHV |
| Ga0306925_121566081 | 3300031890 | Soil | MADAPAPRHALVMHCIAALLQRTLGCPTLEAHQQALQGFLDELTPWISPAALPALVQQPFALFDHLAFTPHGDGD |
| Ga0310890_113179871 | 3300032075 | Soil | MADAQASHHTLVMPFVAALLQRTLSCPTVEAHQQALQGFLDDLTPWSSPVELPTLLEQPCTLFDHLAFTPNGDGDDEDIWVA |
| Ga0307471_1015834481 | 3300032180 | Hardwood Forest Soil | MADEHAPHHALLLQFLGALLQRTVDCPTVEAHQQALQGFLDDLTPWVSPADLPTLLGQPFTLFDHLA |
| Ga0247829_105901381 | 3300033550 | Soil | MAAAPAPHHALVMQFVAALLQRTLGCLTNEAHQHALQGFLDDLTPWISPADLPTLLEQPFTLFDHLAFTPHG |
| Ga0247830_103097763 | 3300033551 | Soil | MAADHAPSHVLVVQFVAALLQRTLDCPTAEAHQHALQGFLDDLTPWFSPVDLPTLLAQPFTVF |
| Ga0247830_108929191 | 3300033551 | Soil | MEDAPAPHHALVMQFVAALLQRTLGCPTVEAHQHALQGFLDDLTPWINPVELPTLLEQP |
| Ga0314783_064856_1_213 | 3300034662 | Soil | MQFVAALLQRTLDCPTVEAHQHALQGFLDELTPWISPVDLPTLVQQPFALFDHLAFTPRGDDDEDVWVALS |
| Ga0314788_061913_2_247 | 3300034666 | Soil | MADAQASHHTLVMPFVAALLQRTLSCPTVEAHQQALQGFLDDLTPWSSPVELPTLLEQPCTLFDHLAFTPNGDGDDEDIWVT |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |