Metagenome / Metatranscriptome Family F080271

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080271
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	109 residues
Representative Sequence	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPSGLH
Number of Associated Samples	86
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.18 %
% of genes near scaffold ends (potentially truncated)	26.96 %
% of genes from short scaffolds (< 2000 bps)	74.78 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.565 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.652 % of family members)
Environment Ontology (ENVO)	Unclassified (45.217 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (84.348 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.14% β-sheet: 0.00% Coil/Unstructured: 52.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF04879	Molybdop_Fe4S4	2.61
PF12857	TOBE_3	2.61
PF04828	GFA	2.61
PF00144	Beta-lactamase	1.74
PF04909	Amidohydro_2	1.74
PF00072	Response_reg	0.87
PF13191	AAA_16	0.87
PF12680	SnoaL_2	0.87
PF13578	Methyltransf_24	0.87
PF00903	Glyoxalase	0.87
PF04454	Linocin_M18	0.87
PF00982	Glyco_transf_20	0.87
PF01361	Tautomerase	0.87
PF00211	Guanylate_cyc	0.87
PF00589	Phage_integrase	0.87
PF00528	BPD_transp_1	0.87
PF11941	DUF3459	0.87
PF00285	Citrate_synt	0.87
PF02417	Chromate_transp	0.87
PF13738	Pyr_redox_3	0.87
PF09286	Pro-kuma_activ	0.87
PF07813	LTXXQ	0.87
PF07690	MFS_1	0.87
PF01370	Epimerase	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.48
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.61
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.74
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.74
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.74
COG0372	Citrate synthase	Energy production and conversion [C]	0.87
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.87
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.87
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.87
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
All Organisms	root	All Organisms	30.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
cellular organisms	root	All Organisms → cellular organisms	30.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.57 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.61 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.61 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.35 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.74 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.35 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.74 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.87 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	1.74 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.74 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.87 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	1.74 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.74 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.74 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.87 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.87 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Solidesulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio	1.74 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1.74 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	1.74 %
Rhodopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula	0.87 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.87 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Solidesulfovibrio alcoholivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	1.74 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	1.74 %
Rhodopirellula europaea	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula europaea	0.87 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.87 %
Hyalangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium	0.87 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.87 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Verrucomicrobium sp. GAS474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	1.74 %
Solidesulfovibrio alcoholivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	1.74 %
unclassified Hyalangium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → unclassified Hyalangium	0.87 %
Rhodopirellula europaea	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula europaea	0.87 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.87 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.87 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Verrucomicrobium sp. GAS474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	1.74 %
Solidesulfovibrio alcoholivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	1.74 %
Hyalangium sp. H56D21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → unclassified Hyalangium → Hyalangium sp. H56D21	0.87 %
Rhodopirellula europaea	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula europaea	0.87 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.87 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.87 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100548994	Not Available	1032	Open in IMG/M
3300002245\|JGIcombinedJ26739_101566703	Not Available	555	Open in IMG/M
3300003220\|JGI26342J46808_1005991	All Organisms → cellular organisms → Bacteria → Acidobacteria	1106	Open in IMG/M
3300003352\|JGI26345J50200_1001565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2064	Open in IMG/M
3300003505\|JGIcombinedJ51221_10306525	Not Available	646	Open in IMG/M
3300004080\|Ga0062385_10912217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	584	Open in IMG/M
3300004082\|Ga0062384_100668037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300004091\|Ga0062387_101679685	Not Available	515	Open in IMG/M
3300004092\|Ga0062389_104646502	Not Available	517	Open in IMG/M
3300004152\|Ga0062386_100456262	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300004152\|Ga0062386_100733626	Not Available	812	Open in IMG/M
3300005332\|Ga0066388_105311445	Not Available	653	Open in IMG/M
3300005437\|Ga0070710_10996240	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula europaea	610	Open in IMG/M
3300005538\|Ga0070731_10086126	Not Available	2082	Open in IMG/M
3300005538\|Ga0070731_10781035	Not Available	634	Open in IMG/M
3300005541\|Ga0070733_10320138	Not Available	1026	Open in IMG/M
3300005542\|Ga0070732_10659986	Not Available	636	Open in IMG/M
3300005591\|Ga0070761_10358371	Not Available	885	Open in IMG/M
3300005610\|Ga0070763_10945664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	514	Open in IMG/M
3300005921\|Ga0070766_10109516	Not Available	1647	Open in IMG/M
3300006176\|Ga0070765_101784629	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	577	Open in IMG/M
3300009683\|Ga0116224_10559013	Not Available	546	Open in IMG/M
3300010048\|Ga0126373_10051589	All Organisms → cellular organisms → Bacteria	3658	Open in IMG/M
3300010341\|Ga0074045_10156564	Not Available	1545	Open in IMG/M
3300010343\|Ga0074044_10054718	Not Available	2730	Open in IMG/M
3300010358\|Ga0126370_11807102	Not Available	591	Open in IMG/M
3300011120\|Ga0150983_14142052	Not Available	585	Open in IMG/M
3300012202\|Ga0137363_10883645	Not Available	759	Open in IMG/M
3300014201\|Ga0181537_10552494	Not Available	786	Open in IMG/M
3300017946\|Ga0187879_10377448	Not Available	786	Open in IMG/M
3300018009\|Ga0187884_10369027	Not Available	578	Open in IMG/M
3300018025\|Ga0187885_10550211	Not Available	513	Open in IMG/M
3300018042\|Ga0187871_10062816	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	2198	Open in IMG/M
3300020579\|Ga0210407_10145996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1821	Open in IMG/M
3300020579\|Ga0210407_11081747	Not Available	608	Open in IMG/M
3300020580\|Ga0210403_10024850	All Organisms → cellular organisms → Bacteria → Proteobacteria	4779	Open in IMG/M
3300020581\|Ga0210399_11005589	Not Available	671	Open in IMG/M
3300020581\|Ga0210399_11172457	Not Available	611	Open in IMG/M
3300020582\|Ga0210395_10914960	Not Available	651	Open in IMG/M
3300020583\|Ga0210401_10634488	Not Available	930	Open in IMG/M
3300021171\|Ga0210405_10361576	Not Available	1144	Open in IMG/M
3300021171\|Ga0210405_10367671	Not Available	1134	Open in IMG/M
3300021171\|Ga0210405_10921915	Not Available	663	Open in IMG/M
3300021178\|Ga0210408_10684172	Not Available	809	Open in IMG/M
3300021178\|Ga0210408_11395643	Not Available	528	Open in IMG/M
3300021180\|Ga0210396_10136706	All Organisms → cellular organisms → Bacteria → Acidobacteria	2206	Open in IMG/M
3300021180\|Ga0210396_11342702	Not Available	593	Open in IMG/M
3300021181\|Ga0210388_11366943	Not Available	596	Open in IMG/M
3300021401\|Ga0210393_10001234	All Organisms → cellular organisms → Bacteria	21642	Open in IMG/M
3300021402\|Ga0210385_10042064	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	3017	Open in IMG/M
3300021402\|Ga0210385_10426929	Not Available	998	Open in IMG/M
3300021402\|Ga0210385_10681843	Not Available	786	Open in IMG/M
3300021403\|Ga0210397_10967776	Not Available	660	Open in IMG/M
3300021404\|Ga0210389_10174365	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300021405\|Ga0210387_11385467	Not Available	605	Open in IMG/M
3300021406\|Ga0210386_10249692	Not Available	1513	Open in IMG/M
3300021407\|Ga0210383_10000424	All Organisms → cellular organisms → Bacteria	39198	Open in IMG/M
3300021407\|Ga0210383_11706329	Not Available	516	Open in IMG/M
3300021420\|Ga0210394_10034945	All Organisms → cellular organisms → Bacteria	4482	Open in IMG/M
3300021432\|Ga0210384_11377763	Not Available	610	Open in IMG/M
3300021474\|Ga0210390_10252276	Not Available	1494	Open in IMG/M
3300021474\|Ga0210390_11463763	Not Available	542	Open in IMG/M
3300021474\|Ga0210390_11516034	Not Available	530	Open in IMG/M
3300021478\|Ga0210402_10792979	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300021478\|Ga0210402_11141861	Not Available	706	Open in IMG/M
3300021479\|Ga0210410_11291649	Not Available	622	Open in IMG/M
3300021479\|Ga0210410_11702687	Not Available	524	Open in IMG/M
3300021559\|Ga0210409_10179688	All Organisms → cellular organisms → Bacteria → Proteobacteria	1932	Open in IMG/M
3300021560\|Ga0126371_10020153	Not Available	6145	Open in IMG/M
3300022532\|Ga0242655_10285590	Not Available	533	Open in IMG/M
3300022716\|Ga0242673_1099088	Not Available	561	Open in IMG/M
3300022722\|Ga0242657_1199252	Not Available	553	Open in IMG/M
3300024227\|Ga0228598_1079695	Not Available	656	Open in IMG/M
3300024271\|Ga0224564_1040611	All Organisms → cellular organisms → Bacteria → Proteobacteria	893	Open in IMG/M
3300027370\|Ga0209010_1005164	Not Available	2680	Open in IMG/M
3300027590\|Ga0209116_1134317	Not Available	540	Open in IMG/M
3300027619\|Ga0209330_1003774	All Organisms → cellular organisms → Bacteria	3584	Open in IMG/M
3300027698\|Ga0209446_1004990	Not Available	3269	Open in IMG/M
3300027767\|Ga0209655_10096635	Not Available	982	Open in IMG/M
3300027767\|Ga0209655_10189356	Not Available	678	Open in IMG/M
3300027795\|Ga0209139_10079178	Not Available	1154	Open in IMG/M
3300027824\|Ga0209040_10031976	All Organisms → cellular organisms → Bacteria	3319	Open in IMG/M
3300027824\|Ga0209040_10296143	Not Available	790	Open in IMG/M
3300027867\|Ga0209167_10303522	Not Available	863	Open in IMG/M
3300027869\|Ga0209579_10045985	Not Available	2334	Open in IMG/M
3300027869\|Ga0209579_10806772	Not Available	507	Open in IMG/M
3300027884\|Ga0209275_10370885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	804	Open in IMG/M
3300027889\|Ga0209380_10028059	Not Available	3173	Open in IMG/M
3300027889\|Ga0209380_10162822	Not Available	1306	Open in IMG/M
3300027895\|Ga0209624_10048951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → unclassified Hyalangium → Hyalangium sp. H56D21	2703	Open in IMG/M
3300027908\|Ga0209006_10795408	Not Available	767	Open in IMG/M
3300028037\|Ga0265349_1019200	Not Available	618	Open in IMG/M
3300028906\|Ga0308309_10358049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1245	Open in IMG/M
3300028906\|Ga0308309_11367663	Not Available	607	Open in IMG/M
3300029636\|Ga0222749_10484738	Not Available	667	Open in IMG/M
3300029999\|Ga0311339_10172930	All Organisms → cellular organisms → Bacteria	2494	Open in IMG/M
3300030494\|Ga0310037_10092549	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300030879\|Ga0265765_1001600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	2101	Open in IMG/M
3300031057\|Ga0170834_113371054	Not Available	629	Open in IMG/M
3300031122\|Ga0170822_16757767	Not Available	514	Open in IMG/M
3300031234\|Ga0302325_10036341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10043	Open in IMG/M
3300031708\|Ga0310686_101851367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1864	Open in IMG/M
3300031708\|Ga0310686_102074838	All Organisms → cellular organisms → Bacteria	11361	Open in IMG/M
3300031708\|Ga0310686_103384049	All Organisms → cellular organisms → Bacteria → Proteobacteria	4591	Open in IMG/M
3300031708\|Ga0310686_108602273	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1172	Open in IMG/M
3300031715\|Ga0307476_10748130	Not Available	724	Open in IMG/M
3300031754\|Ga0307475_10542946	Not Available	933	Open in IMG/M
3300031754\|Ga0307475_11054454	Not Available	637	Open in IMG/M
3300032174\|Ga0307470_11925529	Not Available	504	Open in IMG/M
3300032892\|Ga0335081_10748520	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	1177	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.13%
Host-Associated	Host-Associated	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.61%
Aquatic	Environmental → Aquatic	16.52%
Plants	Host-Associated → Plants	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Freshwater	Environmental → Aquatic → Freshwater	16.52%
Peat	Environmental → Terrestrial → Peat	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.13%
Loam	Environmental → Terrestrial → Soil → Loam	18.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	12.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.09%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.09%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.61%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300003352	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028037	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1005489941	3300002245	Forest Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVX*
JGIcombinedJ26739_1015667031	3300002245	Forest Soil	GRNRRTRNLPLREETMRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASTQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPXGLH*
JGI26342J46808_10059912	3300003220	Bog Forest Soil	MRKTAIVALIVMAGTISPLRYGVSFAQPAPEPAASSSASAQMADKDSAMKMLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGVMAKLKKGEAVPQSDVDAAVATPPGLH*
JGI26345J50200_10015651	3300003352	Bog Forest Soil	MRKTAIVALIVMAGTISPLRYGVSFAQPAPEPAASSSASAQMADKDXAMKMLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGVMAKLKKGEAVPQSDVDAAVATPPGLH*
JGIcombinedJ51221_103065252	3300003505	Forest Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVQ*
Ga0062385_109122171	3300004080	Bog Forest Soil	FREEIMRKPAIVALILIAGTISPLRCGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSTQDPHAVADLDSQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGLH*
Ga0062384_1006680371	3300004082	Bog Forest Soil	MRKIAIVALMVVAGMSTPVQFGVSYAQPAPEAAATSAMADKDSAMKTLADAKKRFRLMRKHSSQDPHAQADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGLH*
Ga0062387_1016796851	3300004091	Bog Forest Soil	GMSGPAQFGVSYAQPAPEAAAPAAMADKDTAMKTLADAKKRFKFMRSKSSQDPHAQADLDRQIKQINGVMAKLKKGQDVPQSDVDAAVATPPGLH*
Ga0062389_1046465021	3300004092	Bog Forest Soil	LMAGMSGPAQFGVSYAQPAPEAAAPAAMADKDTAMKTLADAKKRFKFMRSKSSQDPHAQADLDRQIKQINGVMAKLKKGQDVPQSDVDAAVATPPGLH*
Ga0062386_1004562621	3300004152	Bog Forest Soil	MRKTAIVALIVMAGTISPLRYGVSFAQPAPEPAAISSASAQMADKDSAMKMLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGVMAKLKKGEAVPQSDVDAAVATPPGLH*
Ga0062386_1007336262	3300004152	Bog Forest Soil	MRKIAIVALMVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLHDAKKRFRLMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH*
Ga0066388_1053114451	3300005332	Tropical Forest Soil	MRKVAIAVLTAIIGVSVPIQFGVSFAQPAPEAAATGAMADKDSAMKTLAHAKKHFRLMRKHSSQDPHAQADLDLKIKQVDDLMAKLKKGEQVPQSDIDAAVATPAGLH*
Ga0070710_109962401	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRKLAIVALIVMAGTIGPIQFGVSFAQPAPEAAASSSASTQTADKDSAMKTLADAKKRFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVTTPPGLH*
Ga0070731_100861263	3300005538	Surface Soil	MRKTAIVALLVMAGMSGPVQSGVSYAQPAPEAAAPSAMADKDTAMKTLADAKKRFKFMRSKSSQDPHAQADLDRQIRHINGVMAKLKKGQDVPQSDVDAAVATPPGLH*
Ga0070731_107810351	3300005538	Surface Soil	MRKSAIAALIVMAGMISPIQSGLSYAQPAPGAAASGPASTQMADKDSAMKSLADAKKKFRLMRKHSSQDPHAQADLDSQIKQINGLMAKLKKGEDVPQSDVDAAIATPSGMH*
Ga0070733_103201382	3300005541	Surface Soil	MRKPAIVALIVMAATISPIQLGVSFAQPAPAPAASSSPSTQMADKASAMKTLADAKKRFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPAGLH*
Ga0070732_106599861	3300005542	Surface Soil	MRKPAIVALIVMAGMICPIQLGVSFAQPAPEAAASSSASTQMADKDSAMKTLAAAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEGVPQSDVDAAVATPPGLH*
Ga0070761_103583712	3300005591	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVH*
Ga0070763_109456641	3300005610	Soil	FPVADGRENMRKIAIVALVVMAGMSAPVQFGVSYAQPAPEAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPPGLH*
Ga0070766_101095163	3300005921	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPGAAASSSASAQMADKDSAMKSLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGLMAKLKKGEDVPQSDVDAAVATPSGLH*
Ga0070765_1002604821	3300006176	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPGAAASSSASAQMADKDSAMKSLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGLMAK
Ga0070765_1017846291	3300006176	Soil	MQKIAIVALIVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAVKTLEDAKKRFKLMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDV
Ga0116224_105590131	3300009683	Peatlands Soil	MRKIAIVALVVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLHDAKKRFRLMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH*
Ga0126373_100515894	3300010048	Tropical Forest Soil	MRKVAIAVLTAIIGVSVPIQFGVSFAQPAPEAAASGAMADKDSAMKTLAHAKKHFRLMRKHSSQDPHAQADLDLKIKQVDDLMAKLKKGEQVPQSDIDAAVATPAGLH*
Ga0074045_101565642	3300010341	Bog Forest Soil	MRKIAIVALMVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLHDAKKRFRSMRKHSSQDPHAQADLDRQIEQINGLMAKLKKGEDVPQSDVDAAVATPPGVH*
Ga0074044_100547183	3300010343	Bog Forest Soil	MAGMIGPIQFGVSFAQPAPAAAASSSASSQMADKDSAMKTLADAKKRFRTMRKHNSQDPHAQADLDRQIKQINGVMAKLKKGQDVPQSDVDAAVTTPPGVQ*
Ga0126370_118071021	3300010358	Tropical Forest Soil	MRKTAIVALVMMAGVSTPVQFGVSYAQPAPEAAASSAMADKATAMKTLADAKKKFKFMRQKSSQDPHAQADLDRQIKQINGLMAKLKKGEEVPQSDVDAA
Ga0150983_141420521	3300011120	Forest Soil	MAGMVSPIQLGVSFAQPAPAAAASSAASTQMADKDSAMKSLADAKKKFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVATPPGLH*
Ga0137363_108836451	3300012202	Vadose Zone Soil	MAGMITPIQFGVSLAQPAPAAAAGSSASAQMADKDSAMKSLADAKKHFRTMRKHSSQDPHAQSDLDSQIKQINGVMAKLKEGESVPQSDVDAAIATPSGLH*
Ga0181537_105524942	3300014201	Bog	KPAIVALILLAGTISPLKFGVSFAQPAPGAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDGQIKQINGLMAKLKKGEDVPQSDVDAAVTTPPGLH*
Ga0187879_103774482	3300017946	Peatland	MRKPAIVVLIVIAVTTSPIRTGVSLAQPAPDASASSSANTQMADKDSAMKTLADAKKRFRTMRRHSSQDVHAQADLDRQIKQINGLMAKIKKGEDVPQSDVDAAVATPPGVH
Ga0187884_103690271	3300018009	Peatland	VSLAQPAPDASASSSANTQMADKDSAMKTLADAKKRFRTMRRHSSQDVHAQSDLDRQIKQINGLMAKIKKGEDVPQSDVDAAVATPPGVH
Ga0187885_105502111	3300018025	Peatland	MRKPAIVVLIVIAVTTSPIRTGVSLAQPAPDASASSSANTQMADKDSALKTLADAKKRFRTMRRHSSQDVHAQADLDRQIKQINGLMAKIKKGEDVPQSDVDAAVATPPGVH
Ga0187871_100628163	3300018042	Peatland	MRKPAIVVLIVIAVTTSPIRSGVSLAQPAPDASASSSANTQMADKDSAMKTLADAKKRFRTMRRHSSQDVHAQADLDRQIKQINGLMAKIKKGEDVPQSDVDAAVATPPGVH
Ga0210407_101459963	3300020579	Soil	MRKPAIVALIIMAGTISPIQFGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0210407_110817471	3300020579	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSSASTQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDAQIKQINGLMAKLKKGEEVPQSDVDAAVATPSGVH
Ga0210403_100248506	3300020580	Soil	MRKPAIVALIIMAGTISPIQFGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVVTPPGLH
Ga0210399_110055891	3300020581	Soil	MRKPAIVALIIMAGTISPIQFGVSFAQPAPAAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0210399_111724571	3300020581	Soil	QTNSKSALKRGTMRKPAIVALIVMAATISPIQFGVSFAQPAPEPAASSPAAAQMADKDSATKTLTAAKKRFRMMRKHSSQDPHAQADLDRQITQINGLMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210395_109149602	3300020582	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKG
Ga0210401_106344882	3300020583	Soil	IVMAGAISPIQFGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGESVPQSDVDAAVATPAGVH
Ga0210401_116037242	3300020583	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAATSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADL
Ga0210405_103615762	3300021171	Soil	MRKPAIVALIVMAGAISPIQFGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGESVPQSDVDAAVATPAGVH
Ga0210405_103676712	3300021171	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVQ
Ga0210405_109219151	3300021171	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSSASTQMADKDSAMKTLADAKKRFRIMRKHSSQDPHAQADLDAQIKQINGLMAKLKKGEQVPQSDVDAAVATPSGLH
Ga0210408_106841722	3300021178	Soil	MRKIAIVALVVMAGMSAPVQFGVSYAQPAPGAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0210408_113956431	3300021178	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINDVMAKLKKGE
Ga0210396_101367063	3300021180	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0210396_113427021	3300021180	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRMMRKHSSQDPHAQADLDRQIKQINAVTAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210388_113669431	3300021181	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGESVPQSDVDAAVTTPAGLH
Ga0210393_1000123410	3300021401	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSANTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0210385_100420642	3300021402	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAATSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0210385_104269292	3300021402	Soil	MRKPAIVALILIAGTISPLRYGVSFAQPAPGAAASSAASTQMADKDSALKTLADAKKRFRTMRKHSTQDLHQVADLDRQIKQINTLTAKLKKGEDVPQSDVDAAVATPPSVH
Ga0210385_106818432	3300021402	Soil	MRKIAIVVLMVMAGMSTPVQFGMSYAQPAPEAAGTSAMADKDSAMKTLGDAKKRFKFMRAKSSQDPHAQADLDRQIKQINGLMAKFKKGEDVPQSDVDAAVATPPGLH
Ga0210397_109677761	3300021403	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAMKTLADAKKRFRIMRKHNTQDLHAVADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0210389_101743651	3300021404	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSANTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPAG
Ga0210387_113854672	3300021405	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210386_102496922	3300021406	Soil	MRKPAIVALIVMVGTISPIQLGVSFAQPAPAAAASSAASTQMEDKDSAMKSLADAKKKFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGESVPQSDVDAAITTPTGQH
Ga0210383_1000042416	3300021407	Soil	MRKPAIVALIVMAATISPIQFGVSFAQPAPEPAASSPAAAQMADKDSATKTLTAAKKRFRMMRKHSSQDPHAQADLDRQITQINGLMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210383_117063292	3300021407	Soil	NIRTQKLPLREETMRKTAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEAVPQSDVDAAVATPTGLH
Ga0210394_100349452	3300021420	Soil	MRKSAIVALIVMAGTISPIQFGVSFAQPAPEPAASSSASTQMADKDSAMKTLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPSGLH
Ga0210394_117098962	3300021420	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIK
Ga0210384_113777632	3300021432	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEAVPQSDVDAAIATPPGLH
Ga0210390_102522762	3300021474	Soil	MRKPAIVALILMAGTISPLQFGVSYAQPAPGAAASSAASTQMADKDAAMKTLADAKKRFRIMRKHNTQDLHAVADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0210390_114637631	3300021474	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRMMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGESVPQSDVDAAVTTPAGLH
Ga0210390_115160342	3300021474	Soil	MRKPAIVALILIAGTISPVRYGVSFAQPAPEAAASSAASTQMADKDSALKTLADAKKRFRTMRKHSTQDLHQVADLDRQIKQINTLTAKLKKGEDVPQ
Ga0210402_107929791	3300021478	Soil	MRKPAIVALIIMAGTISPIQFGVSFAQPAPAAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVVTPPGLH
Ga0210402_111418611	3300021478	Soil	SPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210410_112916491	3300021479	Soil	NLPLREENMRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210410_117026871	3300021479	Soil	MRKTAIVALIVIAGTISPIQFGVSFAQPAPGAAASSSASTQMADKDSAKKALADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPAG
Ga0210409_101796881	3300021559	Soil	RKPAIALIIMAGTISPIQFGVSFAQPAPAAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0126371_100201534	3300021560	Tropical Forest Soil	MRKTAIVALVMMVGVSTPVQFGVSYAQPAPEAAASSAMADKATAMKTLADAKKKFKFMRQKSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0242655_102855901	3300022532	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0242673_10990881	3300022716	Soil	DSKSALKEANMRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0242657_11992521	3300022722	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSANTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPSGLH
Ga0228598_10796951	3300024227	Rhizosphere	MRKSAIVALIVMAGTISPIQFGVSYAQPAPEAAASSSASTQMADKDSAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEAVPQSDVDAAVATPAGLH
Ga0224564_10406111	3300024271	Soil	MRKPAIVALIVMAGMISPIQFGVSFAQPAPEAAASSSASTQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINDLTAKLKKGEGVPQSDVDAAVATPAGLH
Ga0209010_10051643	3300027370	Forest Soil	MRKPAIVALILMAGTISPLQFGVSFAQPAAGAAASSAASTQMADKDSAMKTLADAKKRFRTMRKHSTQDLHAVADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0209116_11343171	3300027590	Forest Soil	MRKPAIIALIVIAVTISPIRSGVSLAQPAPDASASSSANTQMADKDSAMKTLADAKKRFRTMRKHSTQDLHAVADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0209330_10037741	3300027619	Forest Soil	MRKPAIVALILMAGTISPLQFGVSYAQPAPGAAASSAASTQMADKDSAMKTLADAKKRFRIMRKHNTQDLHAVADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0209446_10049903	3300027698	Bog Forest Soil	MRKTAIVALIVMAGTISPLRYGVSFAQPAPEPAASSSASAQMADKDSAMKMLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGVMAKLKKGEAVPQSDVDAAVATPPGLH
Ga0209655_100966352	3300027767	Bog Forest Soil	MRKPAIVALILMAGTIGPLQFGVSFAQPAPGAAASSAASTQMADKDSAMKTLADAKKRFRTMRKHNSQDPHAQADLDRQIKQINGVMAKLKKGQDVPQSDVDAAVTTPPGVQ
Ga0209655_101893561	3300027767	Bog Forest Soil	PREETMRKPAIVALIVIAGTITPIQFGVSFAQPAPEPAASSSASAQMADKDSAMKTLAAAKKRFRTMRKHSSQDPHAQADLDRQITQINGLMAKLKKGEDVPQSDVDAAVATPSGVH
Ga0209139_100791782	3300027795	Bog Forest Soil	MRKPAIVALILIAGTISPLRCGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSTQDPHAVADLDSQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0209040_100319763	3300027824	Bog Forest Soil	MRKIAIVALMVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLHDAKKRFRLMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0209040_102961431	3300027824	Bog Forest Soil	MRKTAIVALIVMAGTISPLRYGVSFAQPAPEPAAISSASAQMADKDSAMKMLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGVMAKLKKGEAVPQSDVDAAVATPPGLH
Ga0209167_103035221	3300027867	Surface Soil	REETMRKPAIVALIVMAATISPIQLGVSFAQPAPAPAASSSPSTQMADKASAMKTLADAKKRFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0209579_100459852	3300027869	Surface Soil	MRKTAIVALLVMAGMSGPVQSGVSYAQPAPEAAAPSAMADKDTAMKTLADAKKRFKFMRSKSSQDPHAQADLDRQIRHINGVMAKLKKGQDVPQSDVDAAVATPPGLH
Ga0209579_108067721	3300027869	Surface Soil	MRKPAIVALIVMAGMISPIQSGLSYAQPAPGAAASGPASTQMADKDSAMKSLADAKKKFRLMRKHSSQDPHAQADLDSQIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0209275_103708851	3300027884	Soil	MRKIGIVALVVMAGMSAPVQFGVSYAQPAPGAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0209380_100280594	3300027889	Soil	MRKPAIVALILIAGTISPVRYGVSFAQPAPGAAASSAASTQMADKDSALKTLADAKKRFRTMRKHSTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVQ
Ga0209380_101628221	3300027889	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPGAAASSSASAQMADKDSAMKSLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGLMAKLKKGEDVPQSDVDAAVATPSGLH
Ga0209624_100489514	3300027895	Forest Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPSGLH
Ga0209006_107954082	3300027908	Forest Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASTQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRKIKQINGLTAKLKKGEDVPQSDVDAAVATPSGLH
Ga0265349_10192001	3300028037	Soil	TFVCQEQTDSKSALKEANMRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0308309_103580491	3300028906	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPGAAASSSASAQMADKDSAMKSLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGLMAKLKKGEDVPQ
Ga0308309_113676631	3300028906	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGE
Ga0222749_104847381	3300029636	Soil	MRKIAIVALVVMAGMSAPVQFGVSYAQPAPEAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0311352_113688081	3300029944	Palsa	MRKVAIVALMVMAGMSTPLQFGVSYAQPAPEAAATGAMADKVTALKTLADAKKRFRFMRKHSSQDPHAQADLDGQIKQINGLT
Ga0311339_101729303	3300029999	Palsa	MRKVAIVALMVMAGMSTPLQFGVSYAQPAPEAAATGAMADKDTALKTLADAKKRFRFMRKHSSQDPHAQADLDGQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGLH
Ga0310037_100925492	3300030494	Peatlands Soil	MRKIAIVALVVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLHDAKKRFRLMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0265765_10016001	3300030879	Soil	MRKPAIVALILMAGTISPLQSGLSFAQPAPGAAASSAASTQMADKDAAMKTLADAQKRFRIMRTHKTQALHAVADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0170834_1133710541	3300031057	Forest Soil	MRKTAIVALIVMAGMISPIQFGVSFAQPAPEAAASSSAGSQMADKDSATKTLTDAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0170822_167577671	3300031122	Forest Soil	MRKPAIVALIVMAWTISPIQFGVSFAQPAPGAAASSSASTQMADKDAAMKTLAAAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0302325_100363416	3300031234	Palsa	MVMAGMSTPLQFGVSYAQPAPEAAATGAMADKDTALKTLADAKKRFRFMRKHSSQDPHAQADLDGQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGLH
Ga0310686_1018513672	3300031708	Soil	MRKSAIVALIVMALTISPIRSGVSLAQPAPEAPASSSASTQMADKDSAMKTLADAKKRFRIMRKHSSQDVHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0310686_1020748387	3300031708	Soil	MRKPAIVALIVMAGMISPIQFGVSFAQPAPEAAASSSASTQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINDLTAKLKKGEGVPQSDVDAAVATPSGLH
Ga0310686_1033840493	3300031708	Soil	MRKPAIVALVLMAGTISPLQFGVSFAQPAPGAAASSAASIQMADKDSAMKTLADAKKRFRTMRKHNTQDLHAVADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0310686_1086022732	3300031708	Soil	MRKIKIVALMVVVGMTTPLQFGVSFAQPAPAAVASSSATSQMTDKDAAMKTLTDAKKRFRMMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVSPSDVDAAVATPPGLH
Ga0307476_107481301	3300031715	Hardwood Forest Soil	AIVALMVMAGMSAPVQFGVSYAQPAPEAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPAGMH
Ga0307476_113161811	3300031715	Hardwood Forest Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSANTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAK
Ga0307475_105429462	3300031754	Hardwood Forest Soil	VPVTYVWHEYRLARPFPVADGRENMRKIAIVALMVMTGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPAGMH
Ga0307475_110544541	3300031754	Hardwood Forest Soil	MGMRKTAIVALIVMAWMISPIQFGESFAQPAPGAAASSSASSQMADKDSAMKTLVDAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVVTPPGMH
Ga0307470_119255291	3300032174	Hardwood Forest Soil	LAIVALIVMAGTIGPIQFGVSFAQPAPEAAASSSASTQTADKDSAMKTLADAKKRFRMMRKHSSQDPHAQADLDAQIKQINGLMAKLKKGEDVPQGDVDAAVATPPGLH
Ga0335081_107485201	3300032892	Soil	MRKTAIVALMVIAGMSAPVQFGVSYAQPAPEAAASSAMANKDTAMKTLMDAKKKFRFMRQKSSQDPHAQADLDRQIKQINGVMARLKKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080271

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences