Metagenome / Metatranscriptome Family F080286

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F080286
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	55 residues
Representative Sequence	PPVGANLTLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAIQY
Number of Associated Samples	67
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	35.65 %
% of genes near scaffold ends (potentially truncated)	59.13 %
% of genes from short scaffolds (< 2000 bps)	68.70 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.391 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.391 % of family members)
Environment Ontology (ENVO)	Unclassified (50.435 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (90.435 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.50% β-sheet: 35.00% Coil/Unstructured: 57.50%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF02357	NusG	59.13
PF00196	GerE	11.30
PF10531	SLBB	8.70
PF07238	PilZ	2.61
PF02563	Poly_export	1.74
PF02706	Wzz	1.74
PF13727	CoA_binding_3	0.87
PF00294	PfkB	0.87
PF13692	Glyco_trans_1_4	0.87
PF13807	GNVR	0.87
PF02548	Pantoate_transf	0.87
PF13439	Glyco_transf_4	0.87
PF09721	Exosortase_EpsH	0.87
PF13525	YfiO	0.87
PF13579	Glyco_trans_4_4	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	59.13
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	1.74
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	1.74
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	1.74
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	1.74
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	1.74
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	85.22 %
Unclassified	root	N/A	2.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	65.22 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.39 %
Unclassified	root	N/A	2.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.22 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	16.52 %
Unclassified	root	N/A	2.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.22 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16.52 %
Unclassified	root	N/A	2.61 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.22 %
Unclassified	root	N/A	2.61 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	65.22 %
Unclassified	root	N/A	2.61 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908006\|FWIROz_GJ87FRN02HC2TB	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300001089\|JGI12683J13190_1010286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300001545\|JGI12630J15595_10053118	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300002647\|Ga0005469J37257_104461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300002677\|Ga0005475J37263_110398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300002681\|Ga0005471J37259_105715	All Organisms → cellular organisms → Bacteria → Acidobacteria	12200	Open in IMG/M
3300004092\|Ga0062389_100393330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1501	Open in IMG/M
3300004092\|Ga0062389_104161746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300004099\|Ga0058900_1002881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2668	Open in IMG/M
3300004103\|Ga0058903_1422860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300004104\|Ga0058891_1527837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2181	Open in IMG/M
3300004116\|Ga0058885_1245442	Not Available	583	Open in IMG/M
3300004118\|Ga0058886_1001410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2984	Open in IMG/M
3300004120\|Ga0058901_1573359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1634	Open in IMG/M
3300004131\|Ga0058898_1163250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300004139\|Ga0058897_10000846	Not Available	715	Open in IMG/M
3300004139\|Ga0058897_10022616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2653	Open in IMG/M
3300004139\|Ga0058897_10087379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300004139\|Ga0058897_11111441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2809	Open in IMG/M
3300004631\|Ga0058899_10045344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300004631\|Ga0058899_10162892	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300004631\|Ga0058899_10187464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2149	Open in IMG/M
3300004631\|Ga0058899_10201191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300004631\|Ga0058899_10215014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300004631\|Ga0058899_12117406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300004635\|Ga0062388_100673515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M
3300004635\|Ga0062388_100952085	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005406\|Ga0070703_10001620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	6695	Open in IMG/M
3300005440\|Ga0070705_100922194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300005534\|Ga0070735_10011097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6894	Open in IMG/M
3300005537\|Ga0070730_11030014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300005541\|Ga0070733_10450545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300005591\|Ga0070761_10023066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3471	Open in IMG/M
3300005602\|Ga0070762_11114996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300005921\|Ga0070766_10054257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2262	Open in IMG/M
3300005921\|Ga0070766_10592035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300006176\|Ga0070765_100000396	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	26124	Open in IMG/M
3300006176\|Ga0070765_100060503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3135	Open in IMG/M
3300007982\|Ga0102924_1000075	All Organisms → cellular organisms → Bacteria	113461	Open in IMG/M
3300010343\|Ga0074044_10022805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4496	Open in IMG/M
3300011120\|Ga0150983_10130612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2192	Open in IMG/M
3300011120\|Ga0150983_10172581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300011120\|Ga0150983_10583312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300011120\|Ga0150983_11608002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3207	Open in IMG/M
3300011120\|Ga0150983_11656858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300011120\|Ga0150983_11705146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300011120\|Ga0150983_12525650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1750	Open in IMG/M
3300011120\|Ga0150983_13073388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1148	Open in IMG/M
3300011120\|Ga0150983_14368839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300011120\|Ga0150983_14453437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300011120\|Ga0150983_14636472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300011120\|Ga0150983_15082822	Not Available	842	Open in IMG/M
3300011120\|Ga0150983_15082986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300011120\|Ga0150983_15185347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300011120\|Ga0150983_16679054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300011120\|Ga0150983_16679576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300017927\|Ga0187824_10122384	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300018030\|Ga0187869_10245858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300020579\|Ga0210407_10000442	All Organisms → cellular organisms → Bacteria	47109	Open in IMG/M
3300020579\|Ga0210407_10000500	All Organisms → cellular organisms → Bacteria	44308	Open in IMG/M
3300020579\|Ga0210407_10001076	All Organisms → cellular organisms → Bacteria	27010	Open in IMG/M
3300020579\|Ga0210407_10048584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3165	Open in IMG/M
3300020579\|Ga0210407_10179523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1640	Open in IMG/M
3300020579\|Ga0210407_11232770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300020580\|Ga0210403_10308553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300020580\|Ga0210403_10386043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1144	Open in IMG/M
3300020581\|Ga0210399_10275819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1403	Open in IMG/M
3300020583\|Ga0210401_11041842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300021088\|Ga0210404_10203607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300021088\|Ga0210404_10684549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300021168\|Ga0210406_10034731	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4524	Open in IMG/M
3300021168\|Ga0210406_10316915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1265	Open in IMG/M
3300021168\|Ga0210406_10643211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300021170\|Ga0210400_10752061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300021171\|Ga0210405_10002094	All Organisms → cellular organisms → Bacteria	21180	Open in IMG/M
3300021171\|Ga0210405_10111318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2162	Open in IMG/M
3300021178\|Ga0210408_10020112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5340	Open in IMG/M
3300021401\|Ga0210393_10029200	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4307	Open in IMG/M
3300021401\|Ga0210393_10095954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2358	Open in IMG/M
3300021401\|Ga0210393_10690523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300021403\|Ga0210397_10005093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8000	Open in IMG/M
3300021432\|Ga0210384_10009541	All Organisms → cellular organisms → Bacteria	10005	Open in IMG/M
3300021432\|Ga0210384_10090268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2752	Open in IMG/M
3300021432\|Ga0210384_10545389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300021433\|Ga0210391_10031069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4289	Open in IMG/M
3300021433\|Ga0210391_10188551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1622	Open in IMG/M
3300021474\|Ga0210390_10919654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300021474\|Ga0210390_11320512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300021477\|Ga0210398_11311150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300021478\|Ga0210402_10020598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5653	Open in IMG/M
3300021479\|Ga0210410_10179254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1894	Open in IMG/M
3300021479\|Ga0210410_10674004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300021559\|Ga0210409_10408037	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300021559\|Ga0210409_10643075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300022557\|Ga0212123_10000149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	238451	Open in IMG/M
3300024251\|Ga0247679_1066093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300024284\|Ga0247671_1011489	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1345	Open in IMG/M
3300024323\|Ga0247666_1013420	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300027297\|Ga0208241_1022438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300027460\|Ga0207506_1018544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300027591\|Ga0209733_1082009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300027737\|Ga0209038_10059077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1149	Open in IMG/M
3300027795\|Ga0209139_10321829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300028047\|Ga0209526_10009161	All Organisms → cellular organisms → Bacteria → Acidobacteria	6815	Open in IMG/M
3300028800\|Ga0265338_10928272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300028906\|Ga0308309_10021106	All Organisms → cellular organisms → Bacteria	4300	Open in IMG/M
3300029636\|Ga0222749_10215376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300029636\|Ga0222749_10315741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300029636\|Ga0222749_10414241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300029636\|Ga0222749_10558317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300031231\|Ga0170824_103271806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300031469\|Ga0170819_14153169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300031708\|Ga0310686_111498376	All Organisms → cellular organisms → Bacteria → Acidobacteria	7343	Open in IMG/M
3300032180\|Ga0307471_100673638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300033480\|Ga0316620_11110934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.13%
Host-Associated	Host-Associated	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.43%
Aquatic	Environmental → Aquatic	8.70%
Plants	Host-Associated → Plants	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.43%
Freshwater	Environmental → Aquatic → Freshwater	6.96%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.22%
Loam	Environmental → Terrestrial → Soil → Loam	43.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	41.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.35%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	35.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.09%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.22%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.61%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908006	Soil microbial communities from sample at FACE Site Metagenome WIR_Oz2	Environmental	Open in IMG/M
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002647	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF118 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002677	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF124 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002681	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004116	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF206 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004118	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004131	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF232 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027460	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIROz_04719740	2124908006	Soil	PPVGTSVVMTIDLEGIPDEIGPLPVDVEGEVLRVEQSPAERGMLTGGFAIQY
JGI12683J13190_10102862	3300001089	Forest Soil	FVFAPICPPVGASLVLTIDLEGIPDEIGSVPIEVEGEVLRVEQSPAERETGGFAIEY*
JGI12630J15595_100531181	3300001545	Forest Soil	VVLTIDLEGIPDEIGQLPVEVEGEVLRVEESPAERGMLTGGFAIQY*
Ga0005469J37257_1044611	3300002647	Forest Soil	VVLKIDLEGIPDEIGRLPVEVEGEVLRVEHCPAERGMLTAGFAVQY*
Ga0005475J37263_1103981	3300002677	Forest Soil	VFAPVCPPVGASVLVKIDLEGIPDEIGTLPVEVDGEVLRVEQSPAERGMLTSGFAIQY*
Ga0005471J37259_1057151	3300002681	Forest Soil	CCPPVGASLKLKIDLDGIPEEIGRLPVEVSGEVLRVEQCIAERGMPTGGFAVQY*
Ga0062389_1003933302	3300004092	Bog Forest Soil	VSEHGAFVFASSSCCPPVGASLKLKIDLDGIPDEIGRLPVEVAGEVLRVEQCIAERGMVTGGFAVQY*
Ga0062389_1041617462	3300004092	Bog Forest Soil	LKIDLEGIPDEIGRLPVEVAGEVLRVEQCPAERGMLTGGFAVQY*
Ga0058900_10028814	3300004099	Forest Soil	GEGRSRDVSEHGAFVFASSSSCPPVGVILTLKIDLDGIPDEVGRLPVEVEGEVLRVEQCIAERGMLTGGFAVQY*
Ga0058903_14228602	3300004103	Forest Soil	DLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY*
Ga0058891_15278374	3300004104	Forest Soil	VSEHGAYVYAPMCPPVGANVALKIDLDGIPDEIGPLPVEVDGEVLRVEQSPAERGMLTNGFAIQY*
Ga0058885_12454422	3300004116	Forest Soil	VSEHGAFVFASSSCCPPVGASLTLKIDLDGIPDEIGRLPVEVAGEVLRVEQCIAERGMVTDGFAVEY*
Ga0058886_10014105	3300004118	Forest Soil	VSLTLKIDLDGIPDEVGRLPVEVEGEVLRVEQCIAERGMLTGGFAVQY*
Ga0058901_15733591	3300004120	Forest Soil	VSEHGAFVFASCCPPVGANLRLKIDLDGIPDEIGRLPVEVAGEVLRVEQCIAER
Ga0058898_11632502	3300004131	Forest Soil	LEGIPDEIGLLPVEVEGEVLRVEQCPAERGMLTSGFAVQY*
Ga0058897_100008462	3300004139	Forest Soil	VFAPKCPPVGANVALKIDLDGIPDEMGPLPVEVDGEVLRVEQSPAERGMLTSGFAIEY*
Ga0058897_100226161	3300004139	Forest Soil	LTLKIDLDGIPDEIGRLPVEVEGEVLRVEQCLAERGMLTGGFAVQY*
Ga0058897_100873791	3300004139	Forest Soil	NVALKIDLDGIPDEMGPLPVEVDGEVLRVEQSPAERGMLTSGFAIQY*
Ga0058897_111114411	3300004139	Forest Soil	SEHGAFVFAPSCPPVGTSVALTIDLEGIPEELGRLPVEVAGEVLRVERCPAERGMLTKGFAVQY*
Ga0058899_100453441	3300004631	Forest Soil	GAFVFAPSCPPAGTSVVLKIDLEGIPDEIGRLPVEVEGEVLRVEHCPAERGMLTAGFAVQY*
Ga0058899_101628922	3300004631	Forest Soil	EHGAFVIAPICPPVGANLVLTIDLEGIPDEIGSLPIEVEGEVLRVEQSRAEMETGGFAIQY*
Ga0058899_101874642	3300004631	Forest Soil	VSEHGAFVFASCCPPVGASLKLKIDLDGIPDEIGRLPVEVSGEVLRVEQCIAERGMQTGGFAVQY*
Ga0058899_102011913	3300004631	Forest Soil	VSEHGAFVFASSSSCPPVGVILTLKIDLDGIPDEVGRLPVEVEGEVLRVEQCIAERGMLTGGFAVQY*
Ga0058899_102150142	3300004631	Forest Soil	RQGEGRSRDVSEHGAFVFASSSCCPPVGVSLTLKIDLDGIPDEVGRLPVEVEGEVLRVEQCIAERGMLTGGFAVQY*
Ga0058899_121174061	3300004631	Forest Soil	RSRDVSEHGAFVFASSSCCPPVGASLKLKIDLDGIPDEIGRLPVEVEGEVLRVEQCLAERGMPTGGFAVQY*
Ga0062388_1006735152	3300004635	Bog Forest Soil	PVGASVVVKIDLEGIPDEIGRLPVEVEGEVLRVERCPAERGMLTGGFAVQY*
Ga0062388_1009520851	3300004635	Bog Forest Soil	VGTSVVLKIDLEGIPDEIGRLPVEVEGEVLRVERCPAERGMLTGGFAIEY*
Ga0070703_100016201	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VSEHGAFVFASCCPPVGANLTLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAIQF*
Ga0070705_1009221942	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	FVFAPNCPPVGTRLLLTIDLDGIPDEIGPLPIEVQGEVLRVEQSPAERGMLTGGFAIQY*
Ga0070735_100110976	3300005534	Surface Soil	VSEHGAFIFAPSCPPAGASVVLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY*
Ga0070730_110300142	3300005537	Surface Soil	PDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAIQY*
Ga0070733_104505451	3300005541	Surface Soil	SCPPAGTSVVLKIDLEGIPDEIGRLPVEVEGEVLRVEHCPAERGMLTAGFAVQY*
Ga0070761_100230665	3300005591	Soil	STCPPVGASVVLKIDLEGIPDEIGRLPVEVEGEVLRAEQCPAERGMLTGGFAVQY*
Ga0070762_111149962	3300005602	Soil	SLKLKIDLDGIPDEIGRLPVEVAGEVLRVEQCIAERGMVTDGFAVEY*
Ga0070766_100542571	3300005921	Soil	ICPPVGASVVLKIDLEGIPDEIGRLPVEVEGEVLRAERCPAERGMVTGGFAIQY*
Ga0070766_105920352	3300005921	Soil	VLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY*
Ga0070765_1000003966	3300006176	Soil	VSEHGAFVFASCCPPVGASLTLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY*
Ga0070765_1000605034	3300006176	Soil	VSEHGAFVFASSCPPVGASLTLKIDLDGIPDEIGRLPVEVEGEVLRVEQCLAERGMLTGGFAVQY*
Ga0102924_100007515	3300007982	Iron-Sulfur Acid Spring	MSEHGAFVFASCCPPVGAILTLKIDLEGIPDEIECLPVEVEGEVLRVEKCIAERGMLTGGFAIQY*
Ga0074044_100228051	3300010343	Bog Forest Soil	PSCPPVGTSVVLKIDLEGIPDEIGRLPVEVEGEVLRVERCPAERGMLTGGFAIEY*
Ga0150983_101306122	3300011120	Forest Soil	MIDLEGIPDEIGPLPVEVNGEVLRVEQSAGESGAIGFAIQY*
Ga0150983_101725811	3300011120	Forest Soil	LTLKIDLDGIPDEIGRLPVEVAGEVLRVEQCIAERGMLTGGFAVQY*
Ga0150983_105833122	3300011120	Forest Soil	EGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY*
Ga0150983_116080021	3300011120	Forest Soil	MCPPVGANVALKIDLDGIPDEIGPLPVEVDGEVLRVEQSPAERGMLTNGFAIQY*
Ga0150983_116568582	3300011120	Forest Soil	AFVFAPSCPPAGTSVVLKIDLEGIPDEIGRLPVEVEGEVLRVEHCPAERGMLTAGFAVQY
Ga0150983_117051461	3300011120	Forest Soil	EVGRLPVEVEGEVLRVEQCIAERGMLTGGFAVQY*
Ga0150983_125256502	3300011120	Forest Soil	MLTIDLEGIPDEIGPFPVEVEGEVLRVQKSPAERGVLTDGFAIEY*
Ga0150983_130733882	3300011120	Forest Soil	LLTIDLEGIPDEIGSLPIEVEGEVLRVEQSRAEMETGGFAIEY*
Ga0150983_143688391	3300011120	Forest Soil	MCPPVGANVVLKIDLEGIPDEIGRLPVEVEGEVLRVEESPAERGMLTGGFAIEY*
Ga0150983_144534371	3300011120	Forest Soil	LKLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY*
Ga0150983_146364721	3300011120	Forest Soil	DEIGHLPVEVEGEVLRVEQCPAERGMLTGGFAVQY*
Ga0150983_150828221	3300011120	Forest Soil	VGANVTVRIDLEGIPEEIGLLPVEVDGEVLRVEKSPAERGMLTSGFAIQY*
Ga0150983_150829862	3300011120	Forest Soil	VVLTIELEGIPEELGRLPVEVEGEVLRVEQCPAERGMLTRGFAIQY*
Ga0150983_151853471	3300011120	Forest Soil	VSEHGAYVFAPRCPPVGANVALKIDLDGIPDEMGPLPVEVDGEVLRVEQSPAERGMLTNGFAIQY*
Ga0150983_166790542	3300011120	Forest Soil	EPRQGEGRSRDVSEHGAFVFASSSCCPPVGVSLTLKIDLDGIPDEVGRLPVEVEGEVLRVEQCLAERGMLTGGFAVQY*
Ga0150983_166795762	3300011120	Forest Soil	EPRQGEGRSRDVSEHGAFVFASSSCCPPVGVSLTLKIDLDGIPDEVGRLPVEVEGEVLRVEQCIAERGMLTGGFAVQY*
Ga0187824_101223842	3300017927	Freshwater Sediment	VSEHGAFVFASTCPPVGASIVLKIDLEGIPDEIGRLPVEVEGEVLRAERCPAERGMLTGGFAVQY
Ga0187869_102458582	3300018030	Peatland	VALTIDLEGIPDEFGPLPVRVAGEVLRVEQSPAERGMITNGFAIEY
Ga0210407_1000044238	3300020579	Soil	VSEHGAFVFASSSPPVGASVVLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0210407_100005007	3300020579	Soil	VLLKIDLEGIPEEIGALPVKVEGEVLRVEQCPAERGMLTGGFAIQY
Ga0210407_100010765	3300020579	Soil	VSEHGAFVFASCCPPVGASLKLKIDLDGIPDDIGRLPVEVSGEVLRVEQCMAERGMLTGGFAVQY
Ga0210407_100485845	3300020579	Soil	VGAIVVLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0210407_101795231	3300020579	Soil	VSEHGAFVFASCCPPVGANLTLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAIQF
Ga0210407_112327701	3300020579	Soil	APSCPPAGASVVLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0210403_103085531	3300020580	Soil	PPVGASVILKIDLEGIPDEIGRLPVEVHGEVLRVEQCPAERGMLTGGFAVQY
Ga0210403_103860433	3300020580	Soil	DEIGRLPVEVEGEVLRAEQCPAERGMLTGGFAVQY
Ga0210399_102758193	3300020581	Soil	CPPAGTSVVLKIDLEGIPDEIGRLPVEVEGEVLRVEHCPAERGMLTAGFAVQY
Ga0210401_110418422	3300020583	Soil	VSEHGAFVFASTCPPVGASVVLKIDLEGIPDEIGRLPVEVEGEVLRAEQCPAERGMLTGGFAVHY
Ga0210404_102036071	3300021088	Soil	GEPRQGEGRSRDVSEHGAFVFASSSSCPPVGVILTLKIDLDGIPDEVGRLPVEVEGEVLRVEQCIAERGMLTGGFAVQY
Ga0210404_106845492	3300021088	Soil	EGIPDEIGSLPIEVEGEVLRVEQSRAEMETGGFAIEY
Ga0210406_100347315	3300021168	Soil	VSEHGAFVFASSSSCPPVGVILTLKIDLDGIPDEVGRLPVEVEGEVLRVEQCIAERGMLTGGFAVQY
Ga0210406_103169152	3300021168	Soil	VSEHGAFVFAPNGPPVGASVILKIDLEGIPDEIGRLPVEVHGEVLRVEQCPAERGMLTGGFAVQY
Ga0210406_106432112	3300021168	Soil	VSEHGAFVFASCCPPVGASLKLKIDLDGIPDEIGRLPVEVSGEVLRVEQCIAERGMQTGGFAVQY
Ga0210400_107520612	3300021170	Soil	VFAPICPPVGTSVVLKIDLEGIPDDIGRLPVEVAGEVLRTEQCPAERGMLTGGFAVQY
Ga0210405_1000209410	3300021171	Soil	VSEHGAFVFSSSCPPVGASLTLKIDLEGIPDEIGRLPVEVDGEVLRVEQCPAERGMMTGGFAVQY
Ga0210405_101113181	3300021171	Soil	PDEIGRLPVEVEGEVLRVEQCPAERGMLTAGFAVQY
Ga0210408_100201123	3300021178	Soil	VSEHGAFIFAPNCPPAGASVVLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0210393_100292002	3300021401	Soil	VSEHGAFVFASCCPPVGTSLTLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0210393_100959543	3300021401	Soil	VSEHGAFVFASSSCCPPVGASLTLKIDLDGIPDEIGRLPVEVAGEVLRVEQCIAERGMVTGGFAVQY
Ga0210393_106905231	3300021401	Soil	SEHGAFVFATSCPPVGASVVVKIDLEGIPDEIGRLPVEVAGEVLRVEQCPAERGMLTGGFAVQY
Ga0210397_100050932	3300021403	Soil	VSEHGAFIFAPSCPPAGASVVLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0210384_100095415	3300021432	Soil	VSEHGAFVFAASCPPVGTSVLLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAIQY
Ga0210384_100902682	3300021432	Soil	VSEHGAFIFAPSCPPAGAIVVLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0210384_105453891	3300021432	Soil	VFAPKCPPVGANVALKIDLDGIPDEMGPLPVEVDGEVLRVEQSPAERGMLTSGFA
Ga0210391_100310691	3300021433	Soil	AFVFATSCPPVGASVVVKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0210391_101885511	3300021433	Soil	FVFASCCPPVGASLKLKIDLDGIPEEIGRLPVEVSGEVLRVEQCIAERGMPTGGFAVQY
Ga0210390_109196542	3300021474	Soil	IPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0210390_113205122	3300021474	Soil	SLTLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0210398_113111501	3300021477	Soil	CPPVGTSLTLKIDLDGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0210402_100205984	3300021478	Soil	VSEHGAFIFAPSCPPAGARVVLKIDLEGIPDEIGRLPVEVEGEVLRVVQCPAERGMLTGGFAVQY
Ga0210410_101792543	3300021479	Soil	PVGTSVLLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAIQY
Ga0210410_106740042	3300021479	Soil	LDGIPDEMGPLPVEVDGEVLRVEQSPAERGMLTNGFAIQY
Ga0210409_104080372	3300021559	Soil	VSEHGAFVFAPNCPPVGTKLLLTIDLEGIPDEIGPLPVKVEGEVLRVEQSPAERGMLTGGFAIQY
Ga0210409_106430751	3300021559	Soil	VFAPRCPPVGANVALKIDLDGIPDEMGPLPVEVDGEVLRVEQSPAERGMLTSGFAIQY
Ga0212123_10000149172	3300022557	Iron-Sulfur Acid Spring	MSEHGAFVFASCCPPVGAILTLKIDLEGIPDEIECLPVEVEGEVLRVEKCIAERGMLTGGFAIQY
Ga0247679_10660931	3300024251	Soil	PVGASLTLKIDLEGIPDEIGRLPVQVEGEVLRVEKCPAERGMLTGGFAIQF
Ga0247671_10114891	3300024284	Soil	EGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAIQF
Ga0247666_10134203	3300024323	Soil	VSEHGAFVFASCCPPVGANLTLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAIQY
Ga0208241_10224381	3300027297	Forest Soil	PDEIGTLPVEVDGEVLRVEQSPAERGMLTSGFAIQY
Ga0207506_10185441	3300027460	Soil	DVSEHGAFVFASCCPPVGANLTLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAIQF
Ga0209733_10820091	3300027591	Forest Soil	ICPPVGASLVLTIDLEGIPDEIGSVPIEVEGEVLRVEQSPAERETGGFAIEY
Ga0209038_100590771	3300027737	Bog Forest Soil	DLEGIPDEIGRLPVEVEGEVLRVERCPAERGMLTGGFAIEY
Ga0209139_103218291	3300027795	Bog Forest Soil	AFVFAPNCPPVGTSVVLKIDLEGIPDEIGRLPVEVAGEVLRVEQCPAERGMLTGGFAVQY
Ga0209526_100091616	3300028047	Forest Soil	VVLTIDLEGIPDEIGQLPVEVEGEVLRVEESPAERGMLTGGFAIQY
Ga0265338_109282721	3300028800	Rhizosphere	AFVFASACPPVGTSVVLKIDLEGIPDEIGRLPVEVEGEVLRAEQCPAERGMLTGGFAVQY
Ga0308309_100211063	3300028906	Soil	VSEHGAFVFASSCPPVGASLTLKIDLDGIPDEIGRLPVEVEGEVLRVEQCLAERGMLTGGFAVQY
Ga0222749_102153762	3300029636	Soil	SSSPPVGASVVLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0222749_103157411	3300029636	Soil	PVGASLVLTIDLEGIPDEIGSLPIEVEGEVLRVEQSRAEMETGGFAIQY
Ga0222749_104142412	3300029636	Soil	GAIVVLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAVQY
Ga0222749_105583171	3300029636	Soil	SEHGAFVFAPNCPPVGANVSVKIDLDGIPDEIGPLPVEVDGEVLRVEKSPAERGMLTSGFAIQY
Ga0170824_1032718062	3300031231	Forest Soil	ANVTVKIDLDGIPDEIGPLPVEVVGEVLRVEKSPAERGMLTSGFAIQY
Ga0170819_141531692	3300031469	Forest Soil	VGANVVLKIDLEGIPDEIGRLPVEVEGEVLRVEESPAERGMLTGGFAIEY
Ga0310686_1114983766	3300031708	Soil	VSEHGAFVFASCCPPVGASLTLKIDLDGIPEEIGRLPVEVEGEVLRVEQCIAERGMLTGGFAVQY
Ga0307471_1006736381	3300032180	Hardwood Forest Soil	MTIDLEGIPDEIGPLPVDVEGEVLRVEQSPAERGMLTGGFAIQY
Ga0316620_111109342	3300033480	Soil	PPVGANLTLKIDLEGIPDEIGRLPVEVEGEVLRVEQCPAERGMLTGGFAIQY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080286

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences