Metagenome / Metatranscriptome Family F080314

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080314
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	92 residues
Representative Sequence	SVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Number of Associated Samples	108
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	88.70 %
% of genes from short scaffolds (< 2000 bps)	88.70 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.435 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.652 % of family members)
Environment Ontology (ENVO)	Unclassified (29.565 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.957 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 60.00% Coil/Unstructured: 40.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13884	Peptidase_S74	5.22
PF03948	Ribosomal_L9_C	1.74
PF13385	Laminin_G_3	1.74
PF17164	DUF5122	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0359	Ribosomal protein L9	Translation, ribosomal structure and biogenesis [J]	1.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.43 %
Unclassified	root	N/A	9.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.43 %
Unclassified	root	N/A	9.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.43 %
Unclassified	root	N/A	9.57 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	90.43 %
Unclassified	root	N/A	9.57 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	90.43 %
Unclassified	root	N/A	9.57 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	80.00 %
Unclassified	root	N/A	9.57 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.00 %
Unclassified	root	N/A	9.57 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.00 %
Unclassified	root	N/A	9.57 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.00 %
Unclassified	root	N/A	9.57 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	80.00 %
Unclassified	root	N/A	9.57 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02HPQ43	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
2170459010\|GIO7OMY02JVV6X	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
2170459023\|GZGNO2B02IRJDS	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
2189573000\|GPBTN7E01D1UO6	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
2189573002\|GZIGXIF02G3IUM	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
2189573003\|GZIR7W401DO2FT	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300000891\|JGI10214J12806_10290802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300005177\|Ga0066690_10898858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300005181\|Ga0066678_10396796	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	914	Open in IMG/M
3300005181\|Ga0066678_10630555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300005186\|Ga0066676_10068508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2074	Open in IMG/M
3300005329\|Ga0070683_102294317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300005340\|Ga0070689_100709462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	879	Open in IMG/M
3300005366\|Ga0070659_101508323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300005435\|Ga0070714_102372051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300005437\|Ga0070710_10156453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1410	Open in IMG/M
3300005450\|Ga0066682_10457716	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	810	Open in IMG/M
3300005457\|Ga0070662_101511582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300005468\|Ga0070707_101892076	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300005554\|Ga0066661_10511020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300005576\|Ga0066708_10840504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300005586\|Ga0066691_10896601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300005713\|Ga0066905_100999419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300005764\|Ga0066903_100836355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1653	Open in IMG/M
3300005764\|Ga0066903_105768372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300006175\|Ga0070712_100542005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	980	Open in IMG/M
3300006796\|Ga0066665_10500616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	995	Open in IMG/M
3300006796\|Ga0066665_11388724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300006797\|Ga0066659_11225003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300006797\|Ga0066659_11485623	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300006800\|Ga0066660_10596401	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	923	Open in IMG/M
3300006844\|Ga0075428_102685709	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300006854\|Ga0075425_100872276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1030	Open in IMG/M
3300006871\|Ga0075434_101254326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	753	Open in IMG/M
3300007076\|Ga0075435_100544733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1005	Open in IMG/M
3300007255\|Ga0099791_10108148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1283	Open in IMG/M
3300009100\|Ga0075418_13090920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300009156\|Ga0111538_13958917	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300009162\|Ga0075423_12501069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300009174\|Ga0105241_11252193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	705	Open in IMG/M
3300009176\|Ga0105242_12261476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300010038\|Ga0126315_10883410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300010040\|Ga0126308_11096155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300010042\|Ga0126314_11293999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300010303\|Ga0134082_10101929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1137	Open in IMG/M
3300010320\|Ga0134109_10198574	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300010322\|Ga0134084_10067756	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1084	Open in IMG/M
3300010325\|Ga0134064_10111836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	909	Open in IMG/M
3300010337\|Ga0134062_10216248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	879	Open in IMG/M
3300010397\|Ga0134124_12006702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300012198\|Ga0137364_10486918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	927	Open in IMG/M
3300012201\|Ga0137365_11285517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300012211\|Ga0137377_10550131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1092	Open in IMG/M
3300012285\|Ga0137370_10873479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300012358\|Ga0137368_10543481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	744	Open in IMG/M
3300012362\|Ga0137361_10400132	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1261	Open in IMG/M
3300012532\|Ga0137373_10957590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300012904\|Ga0157282_10423049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300012908\|Ga0157286_10430594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300012930\|Ga0137407_11776197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300012977\|Ga0134087_10339745	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300014150\|Ga0134081_10017833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1974	Open in IMG/M
3300015264\|Ga0137403_10095943	Not Available	2977	Open in IMG/M
3300015371\|Ga0132258_11603617	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1643	Open in IMG/M
3300015373\|Ga0132257_100758276	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1209	Open in IMG/M
3300015374\|Ga0132255_102629747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	769	Open in IMG/M
3300016270\|Ga0182036_10290010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1240	Open in IMG/M
3300018000\|Ga0184604_10147450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	773	Open in IMG/M
3300018076\|Ga0184609_10342224	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300018468\|Ga0066662_12910858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300018482\|Ga0066669_11474969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300018482\|Ga0066669_12386253	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300019356\|Ga0173481_10278446	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	767	Open in IMG/M
3300019866\|Ga0193756_1052270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300019872\|Ga0193754_1004919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1310	Open in IMG/M
3300019876\|Ga0193703_1038348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	743	Open in IMG/M
3300019878\|Ga0193715_1076179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300019881\|Ga0193707_1066552	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1124	Open in IMG/M
3300020001\|Ga0193731_1023768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1608	Open in IMG/M
3300021560\|Ga0126371_12373054	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300022534\|Ga0224452_1047910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1265	Open in IMG/M
3300022694\|Ga0222623_10264676	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300022756\|Ga0222622_10956930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300025315\|Ga0207697_10284976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300025315\|Ga0207697_10343876	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300025938\|Ga0207704_11489232	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300026374\|Ga0257146_1071412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300027876\|Ga0209974_10065174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1237	Open in IMG/M
3300028819\|Ga0307296_10547812	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300028828\|Ga0307312_11121142	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300028875\|Ga0307289_10253288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300028880\|Ga0307300_10327445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300030844\|Ga0075377_11797560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300030847\|Ga0075405_12164790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300030969\|Ga0075394_11700762	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300030979\|Ga0068589_11684064	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300031446\|Ga0170820_17866636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300031474\|Ga0170818_106325872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1355	Open in IMG/M
3300031716\|Ga0310813_11412040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300031720\|Ga0307469_11569329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300031833\|Ga0310917_10355293	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	995	Open in IMG/M
3300031913\|Ga0310891_10245316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300032001\|Ga0306922_10217497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2051	Open in IMG/M
3300032261\|Ga0306920_100932195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1268	Open in IMG/M
3300032421\|Ga0310812_10296234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	718	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.35%
Host-Associated	Host-Associated	15.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.13%
Plants	Host-Associated → Plants	15.65%
Aquatic	Environmental → Aquatic	5.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.09%
Sediment	Environmental → Aquatic → Sediment	5.22%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.30%
Loam	Environmental → Terrestrial → Soil → Loam	7.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.87%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.61%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.61%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
2189573003	Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019872	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030979	Forest soil microbial communities from France, for metatranscriptomics studies - Site 11 - Champenoux / Amance forest (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_04724970	2170459010	Grass Soil	VQRSSANGDFSLNFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP
F62_01729170	2170459010	Grass Soil	HFVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGAGTGPLAGIHGQGTFVFTGLTSLTDVIYYVYTP
FA3_11147260	2170459023	Grass Soil	QRTSANGDFSLTFDEVLSYNGGTLGYRGEGGLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
N55_05790200	2189573000	Grass Soil	EAGTQTFVQFDFTGLHDICLADGSVVTGTVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
FE1_06445070	2189573002	Grass Soil	QAGRQTFVEFDFTGQHDICLADGSVVTGVVEGHLVQRTSVNGDFSLTFDEILSYNGGTLGYRGEGSLTRGNWQSNVVTVGAGTGPLAGIHGQGTFVFTGLTSLADVIYYVYTP
FE2_07933060	2189573003	Grass Soil	FTGLHDICLADRSVVTGIVEGHLAQRSSANGDFSLTFDEVLTYNGGTLGYRGGGSLTGDNWHSHVTTVGAGTGPLAGIHGHGTFVFTGPASLTDVIYYVYTP
JGI10214J12806_102908022	3300000891	Soil	VQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGLTSLADVIYYVYTP*
Ga0066690_108988581	3300005177	Soil	FDFTGLHDICLADRSVVAGIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTGDNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0066678_103967962	3300005181	Soil	IVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0066678_106305552	3300005181	Soil	IVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066676_100685085	3300005186	Soil	ANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0070683_1022943171	3300005329	Corn Rhizosphere	VEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0070689_1007094621	3300005340	Switchgrass Rhizosphere	TGLHTICLADRSVVTGIIEGHLVQRTSANGDFSLTFDEVLSYNGGTLGFRGNGSLTGDNWQSHVASVGKGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0070659_1015083231	3300005366	Corn Rhizosphere	QTFVEFDFTGLHDICLADGSEVTGTVAGHLVQRTSANGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFEFTGPASFADLIYYVYTP*
Ga0070714_1023720511	3300005435	Agricultural Soil	RQAGRQTFVQFDFTGLHDICLADHSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0070710_101564534	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	FDFTGLHDICLADRSVVTGIVEGHLVQRISANRDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0066682_104577161	3300005450	Soil	DFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0070662_1015115822	3300005457	Corn Rhizosphere	GHLVQRTSDNGDLGLRFDEVLSYGGGTLGYRGEGSLTRGNWQSHVVTVGAGTGPLNGIHGQGTFEFTGPASFADLIYYVYTP*
Ga0070707_1018920761	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066661_105110201	3300005554	Soil	DICLADRSVVAGIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066700_107025371	3300005559	Soil	SLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066708_108405042	3300005576	Soil	SVVTGIVAGHLVQRTSANGDFSLTFNEVLSYNGGMLGYRGQGILTGGNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0066691_108966011	3300005586	Soil	SANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDAIYYVYTP*
Ga0066905_1009994192	3300005713	Tropical Forest Soil	SVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066903_1008363551	3300005764	Tropical Forest Soil	QRISANGDFSLTFDEVLSYNGGTLGYRGEGGLTGGNWHSNVVTVGLGTGPLAGIHGQGTFVFTGPTSLADVIYYVYAP*
Ga0066903_1057683722	3300005764	Tropical Forest Soil	VREAGRQTFVEFDFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0070712_1005420051	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	QTFVQFDFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGQGILTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066665_105006162	3300006796	Soil	QRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0066665_113887242	3300006796	Soil	VTGIVEGHLVQRSSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWHSNVVTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066659_112250031	3300006797	Soil	DRSVVTGIVEGHLVQRISANGDFSLTFDEILSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0066659_114856231	3300006797	Soil	IVEGHLVQRISANGDFSLTFDEILSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066660_105964011	3300006800	Soil	GIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGVGILTGGNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0075428_1026857091	3300006844	Populus Rhizosphere	FVEFDFTGLHDICLADGSQVTGTVAGHLVQRTSDNGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFEFTGPASFADLIYYVYTP*
Ga0075425_1008722761	3300006854	Populus Rhizosphere	FVEFDFTGLHDICLADGSVVTGIVEGHLVQRISANGDFSLTFDEILSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0075434_1012543262	3300006871	Populus Rhizosphere	TGIVEGHLVQRTSANGDFSLRFDEVLSYNGGTLGYRGEGSLTRGNWHSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0075435_1005447331	3300007076	Populus Rhizosphere	GRQTFVEFDFTGLHDICLADHSVVTGIVEGHLVQRTSANGDFSLTVDEILSYNGGELRYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0099791_101081481	3300007255	Vadose Zone Soil	QAGSQTFVQFDFTGLHDICLADRSVVTGIVEGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0075418_130909201	3300009100	Populus Rhizosphere	VQRTSDNGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFEFTGPASFADLIYYVYTP*
Ga0111538_139589171	3300009156	Populus Rhizosphere	QAGRQTFVEFDFTGLHDICLEDHSVVTGIVEGHLVQRTSENGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFEFTGPASFADLIYYVYTP*
Ga0075423_125010691	3300009162	Populus Rhizosphere	TRQAGRQTFVQFDFTGLHDICLADRSVVTGIVEGHLVQRISGNGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0105241_112521931	3300009174	Corn Rhizosphere	TGIVEGHLMQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRSNWRSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0105242_122614761	3300009176	Miscanthus Rhizosphere	GRQTFVEFDFTGLHDICLADHSVVTGVVEGHLVQRISANGDFSLTVDEVLSYNGGTLGYRDEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0126315_108834101	3300010038	Serpentine Soil	QTFVQFDFTGLHDICLADGSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0126308_110961552	3300010040	Serpentine Soil	VEGHLVQRMSANGDFSLTVDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYAP*
Ga0126314_112939991	3300010042	Serpentine Soil	FVQFDFTGLHDICLADGSVVTGIVTGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVVTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0134082_101019292	3300010303	Grasslands Soil	FVEFDFTGLHDICLADHSVVTGIVEGHLVQRISADGDFSLTFDEVLSYNDGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0134109_101985742	3300010320	Grasslands Soil	LVQRISANGDFSLTFDEVLSYNGGTLGYRGQGILTGGNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0134084_100677561	3300010322	Grasslands Soil	HSVVTGIVEGHLVQRISADGDFSLTFDEVLSYNDGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0134064_101118361	3300010325	Grasslands Soil	DGSVVTGIVEGHLAQRSSANGDFSLTFDEVLSYNGGTLGYLGGGSLTGGNWHSHVATVGNGTGPLAGIHGHGTFVFTGPTSLTDVIYYVYTP*
Ga0134062_102162481	3300010337	Grasslands Soil	GDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0134124_120067022	3300010397	Terrestrial Soil	LADGSAVIGIVEGHLVQRISANGDFSLTFAEVLSYNGGTLGYRGEGSLTGGNWHSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0137364_104869181	3300012198	Vadose Zone Soil	ICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTLGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0137365_112855171	3300012201	Vadose Zone Soil	RQAGSQTFVQFDFTGLHDICLADRSVVTGIVAGHLIQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0137376_111407431	3300012208	Vadose Zone Soil	TFDEVLSYNGGTLGYRGEGSLTGANWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASIADVIYYVYTP*
Ga0137377_105501312	3300012211	Vadose Zone Soil	DFSLTFDEVLSYNGGTLGYRGEGSLTGANWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0137370_108734792	3300012285	Vadose Zone Soil	VTGIVAGHLVQRTSANGDFGLNFDEVLSYNGGTLGYRGAGSLTGGNWHSHVTTVGNGTGPLAGIHGQGTFVFTGPASLTDVINYVYTP*
Ga0137371_105874393	3300012356	Vadose Zone Soil	FDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYMP*
Ga0137368_105434811	3300012358	Vadose Zone Soil	RISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPPAGIHGQGTFVFTGPASIADVIYYVYTP*
Ga0137361_104001322	3300012362	Vadose Zone Soil	AGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGRGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0137373_109575901	3300012532	Vadose Zone Soil	SVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSHVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0157282_104230491	3300012904	Soil	GSQTFVEFDFTGLHTICLGDGSVVTATIEGHLVQRTSANGDFSLTFDEVLSYNGGTLGFRGEGTLTGSNWQSNVMTVGYGTGPLAGIHGQGTFVFTGPTTLTDVVYYVYTP*
Ga0157286_104305941	3300012908	Soil	DHSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGVTLGYRGEGSLTRGNWHSNVVTVGFGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0157306_103221602	3300012912	Soil	FDEVLSYNGGTLGYRGQGSLTGGNWHSHVVTVGNGTGPLAGIHGQGTFVSTGPTSLTDVIYYVYTP*
Ga0137407_117761971	3300012930	Vadose Zone Soil	ICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0164301_113287522	3300012960	Soil	TFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGSLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0134087_103397452	3300012977	Grasslands Soil	TGLHDICLADGSVVTGIVAGHLVQRTSANGDFGLNFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHRQGTFVFTGPASLTDLIYYVYTP*
Ga0134081_100178331	3300014150	Grasslands Soil	SVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0137403_100959432	3300015264	Vadose Zone Soil	SANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0132258_116036171	3300015371	Arabidopsis Rhizosphere	FTGLHDICLADRSVVTGIVEGHLAQRSSANGDFSLTFDEVLTYNGGTLGYRGGGSLTGDNWHSHVTTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0132257_1007582762	3300015373	Arabidopsis Rhizosphere	DFTGLHDICLADGSAVIGIVEGHLVQRISANGDFSLTFAEVLSYNGGTLGYRGEGGLRGGNWQSNVMTVGLGTGSLAGIHGQGTFVFTGPASLADTIYYVYTP*
Ga0132255_1026297472	3300015374	Arabidopsis Rhizosphere	GRQTFVEFDFTGLHDICLADGSVVTGIVEGHMVQRISANGDFSLRFDEVLSYNGGTLGYRGQGSLTGGNWHSHVVTVGNGTGPLAGIHGQGTFVSTGPTSLTDVIYYVYTP*
Ga0182036_102900103	3300016270	Soil	QTFVEFDFTGLHDICLEDHSVVTGIVEGHLVQRTSDNGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFWFTGPASFADLIYYVYTP
Ga0184604_101474502	3300018000	Groundwater Sediment	VTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP
Ga0184638_12633721	3300018052	Groundwater Sediment	FSLTFDEVLSYNGGTLGYRGVGILTGGNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPTSLADVIYYVYTP
Ga0184609_103422242	3300018076	Groundwater Sediment	FVQFDFTGLHDICLADGSVVTGIVAGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0066662_129108581	3300018468	Grasslands Soil	ANGDFSLTFDEVLSYNGGTLGYRGEGSLTGDNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0066669_114749692	3300018482	Grasslands Soil	SVVTGIVEGHLAQRSSANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0066669_123862531	3300018482	Grasslands Soil	SVVTGIVEGHLAQRSSANGDFSLTFDEVLSYNGGTLGYRGGGSLTGENWHSHVTTVGAGTGPLAGIHGHGTFVFTGPTSLTDVIYYVYTP
Ga0173481_102784462	3300019356	Soil	EFDFTGLHEICLADGSVVTGIVEGHMVQRISANGDFSLRFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0193756_10522702	3300019866	Soil	SLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0193754_10049193	3300019872	Soil	DICLADGSVVKGIVEGHLSQRISANGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLADVIYYVYTP
Ga0193703_10383482	3300019876	Soil	DGSVVTGIVEGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP
Ga0193715_10761791	3300019878	Soil	VRQAGRQTFVQFDFTGLHDICLADGSVVTGIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0193707_10665522	3300019881	Soil	ISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSHVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0193731_10237681	3300020001	Soil	ICLADRSVVTGIVTGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0126371_123730542	3300021560	Tropical Forest Soil	QRISANGDFSLTFDEVLSYNGGTLGYRGEASLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0224452_10479101	3300022534	Groundwater Sediment	VVTGIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0222623_102646762	3300022694	Groundwater Sediment	HLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSHVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0222622_109569301	3300022756	Groundwater Sediment	LADGSVVTGIVEGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0207697_102849761	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	EGHLVQRTSENGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGTGTGPLTGIHGQGTFEFTGPASFADLIYYVYTP
Ga0207697_103438761	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	AGRQTFVEFDFTGLHDICLADHSVVTGVVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGGLTGGNWHSNVQTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP
Ga0207704_114892322	3300025938	Miscanthus Rhizosphere	VEGHLMQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWRSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP
Ga0209468_11099491	3300026306	Soil	SLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP
Ga0257146_10714122	3300026374	Soil	GTQTFVQFDFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLTVDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0209974_100651742	3300027876	Arabidopsis Thaliana Rhizosphere	VTGIVAGHLVQRTSTNGDFSLTFDEVLSYNGGTLGYRGQGSLTGGNWHSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP
Ga0307296_105478121	3300028819	Soil	DICLADRSVVTGIVEGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0307312_111211422	3300028828	Soil	GIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0307289_102532881	3300028875	Soil	EGHMSQRISANGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLADVIYYVYTP
Ga0307300_103274451	3300028880	Soil	RQAGRQTFVQFDFTGLHDICLADGSVVTGIVEGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP
Ga0075377_117975601	3300030844	Soil	VQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWHSHVVTVGNGTGPLAGIHGQGTFVFTGLTSLADVIYYVYTP
Ga0075405_121647901	3300030847	Soil	GHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGGGSLTGGNWHSHVVTVGNGTGPLAGIHGQGTFVFTGLTSLTDVIYYVYTP
Ga0075394_117007621	3300030969	Soil	LRADERHPRLLRQQRSRRPERQAGRQTFVQFDFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0068589_116840641	3300030979	Soil	VRQAGRQTFVEFDFTGLHEICLADGSVVTGIVAGHFVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTGDNWQSHVTTVGAGTGPLAGIHGHGTFVFTGPASLTDVIYYVYTP
Ga0170820_178666361	3300031446	Forest Soil	ISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRDNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP
Ga0170818_1063258721	3300031474	Forest Soil	FVQFDFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP
Ga0310813_114120402	3300031716	Soil	RQAGSQTFVQFDFTGLHDICLADRSVVTGIVAGHLVQRSSANGDFSLTFDEVLSYNGGTLGYRGQGILTGGNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0307469_115693291	3300031720	Hardwood Forest Soil	VRQAGRQTFVEFDFTGLHDICLADRSVVTGIVEGHLVQRTSDNGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLAGIHGQGTFVFTGPTSLADVIYYVYTP
Ga0310917_103552933	3300031833	Soil	SVVTGIVEGHLVQRTSENGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFWFTGPASFADLIYYVYTP
Ga0310891_102453162	3300031913	Soil	VTGHLVQRTSANGDFSLTFDEVLSHNGGTLGYRGQGILTGGNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTTLTDVVYYVYTP
Ga0306926_128635231	3300031954	Soil	TFDEILSYNGGTLGYRGEASLSRGNWHSNVVTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0306922_102174971	3300032001	Soil	TGLHDICLADGSVVTGIVEGHLVQRTSENGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFWFTGPASFADLIYYVYTP
Ga0306920_1009321952	3300032261	Soil	LHDICLADHSVVTGIVEGHLVQRTSDNGDFSLTFDEILSYNGGTLGYRGEASLSRGNWHSNVVTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0310812_102962342	3300032421	Soil	DHSVVTGIVEGHMVQRISANGDFSLRFDEVLSYNGGTLGYRGQGSLTGGNWHSHVVTVGNGTGPLAGIHGQGTFVSTGPTSLTDVIYYVYTP
Ga0214472_112288831	3300033407	Soil	DGDLTLRFDEVLSYGGGTLGYRGEASLSGSNWQGHVQTVGAGAGALAGISGQGSFFPTGPTSFADVIDYVYR
Ga0310810_105477231	3300033412	Soil	SLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080314

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences