Metagenome / Metatranscriptome Family F080335

Basic Information
Family ID	F080335
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	66 residues
Representative Sequence	MQRFSASDAKYSYSPDHASIGTVEAGERFEVESVEGFSGYFRSPSDFTPEVYAEAEAHKWAVTGP
Number of Associated Samples	104
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.09 %
% of genes near scaffold ends (potentially truncated)	95.65 %
% of genes from short scaffolds (< 2000 bps)	93.91 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (66.087 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.783 % of family members)
Environment Ontology (ENVO)	Unclassified (21.739 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.13% β-sheet: 6.45% Coil/Unstructured: 77.42%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00106	adh_short	67.83
PF13561	adh_short_C2	7.83
PF01168	Ala_racemase_N	6.96
PF01547	SBP_bac_1	3.48
PF07729	FCD	2.61
PF01833	TIG	0.87
PF08659	KR	0.87
PF00171	Aldedh	0.87
PF03069	FmdA_AmdA	0.87
PF14031	D-ser_dehydrat	0.87
PF00753	Lactamase_B	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	2.61
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	2.61
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.87
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.87
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.87
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.70 %
Unclassified	root	N/A	31.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.70 %
Unclassified	root	N/A	31.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.09 %
Unclassified	root	N/A	31.30 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.22 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	2.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.61 %
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	1.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	2.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.61 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Candidatus Aerophobetes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	2.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.61 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
unclassified Aerophobetes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Halobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae	2.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.61 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Candidatus Aerophobetes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Candidatus Aerophobetes bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Halovenus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Halovenus	2.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.61 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Candidatus Aerophobetes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Candidatus Aerophobetes bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Halovenus aranensis	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Halovenus → Halovenus aranensis	2.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.61 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Candidatus Aerophobetes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Candidatus Aerophobetes bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_11387419	Not Available	577	Open in IMG/M
3300004081\|Ga0063454_101655823	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Halovenus → Halovenus aranensis	554	Open in IMG/M
3300004156\|Ga0062589_101221737	Not Available	721	Open in IMG/M
3300004479\|Ga0062595_102384125	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005093\|Ga0062594_102449193	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005176\|Ga0066679_10198135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1279	Open in IMG/M
3300005176\|Ga0066679_10930001	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005187\|Ga0066675_10511601	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300005332\|Ga0066388_105163291	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005437\|Ga0070710_11326933	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005438\|Ga0070701_10588925	Not Available	735	Open in IMG/M
3300005445\|Ga0070708_100821007	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300005458\|Ga0070681_11661662	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005553\|Ga0066695_10125716	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300005713\|Ga0066905_102150589	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005719\|Ga0068861_100636924	Not Available	983	Open in IMG/M
3300005764\|Ga0066903_100985815	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300005764\|Ga0066903_101054477	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300005764\|Ga0066903_105320132	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005764\|Ga0066903_107537681	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005764\|Ga0066903_107598407	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300006028\|Ga0070717_10651806	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300006049\|Ga0075417_10494679	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300006050\|Ga0075028_100272705	Not Available	935	Open in IMG/M
3300006050\|Ga0075028_100730545	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300006050\|Ga0075028_100791195	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300006175\|Ga0070712_100020523	All Organisms → cellular organisms → Bacteria	4324	Open in IMG/M
3300006605\|Ga0074057_11883935	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300006904\|Ga0075424_100720237	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300007076\|Ga0075435_100939857	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300009012\|Ga0066710_100937107	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300009098\|Ga0105245_12164407	Not Available	610	Open in IMG/M
3300009176\|Ga0105242_10828009	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300009810\|Ga0105088_1085541	Not Available	569	Open in IMG/M
3300010323\|Ga0134086_10297157	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aerophobetes → unclassified Aerophobetes → Candidatus Aerophobetes bacterium	626	Open in IMG/M
3300010376\|Ga0126381_104029868	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010398\|Ga0126383_13437523	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300010399\|Ga0134127_13350771	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Halovenus → Halovenus aranensis	524	Open in IMG/M
3300011119\|Ga0105246_12207637	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012010\|Ga0120118_1065206	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300012189\|Ga0137388_10986712	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300012198\|Ga0137364_11374090	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012285\|Ga0137370_11015328	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300012349\|Ga0137387_11303644	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012354\|Ga0137366_10482034	Not Available	897	Open in IMG/M
3300012984\|Ga0164309_10157103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1519	Open in IMG/M
3300012985\|Ga0164308_10717117	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300012986\|Ga0164304_11664682	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012986\|Ga0164304_11731569	Not Available	522	Open in IMG/M
3300015086\|Ga0167655_1024697	Not Available	1002	Open in IMG/M
3300015373\|Ga0132257_101324761	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300015374\|Ga0132255_104748767	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300016341\|Ga0182035_10323510	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300016404\|Ga0182037_11336919	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300017947\|Ga0187785_10120916	Not Available	1070	Open in IMG/M
3300017961\|Ga0187778_10138057	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300017965\|Ga0190266_10613846	Not Available	661	Open in IMG/M
3300018028\|Ga0184608_10444786	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300018058\|Ga0187766_10771484	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300018469\|Ga0190270_11874587	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300018476\|Ga0190274_10028165	Not Available	3797	Open in IMG/M
3300019356\|Ga0173481_10493402	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300019885\|Ga0193747_1095817	Not Available	722	Open in IMG/M
3300021418\|Ga0193695_1056840	Not Available	850	Open in IMG/M
3300024330\|Ga0137417_1418474	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300025923\|Ga0207681_10958734	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300025927\|Ga0207687_11844311	Not Available	517	Open in IMG/M
3300025929\|Ga0207664_10169565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1867	Open in IMG/M
3300025931\|Ga0207644_10386367	Not Available	1142	Open in IMG/M
3300025932\|Ga0207690_11289195	Not Available	610	Open in IMG/M
3300025937\|Ga0207669_10939268	Not Available	724	Open in IMG/M
3300025944\|Ga0207661_10080022	All Organisms → cellular organisms → Bacteria	2695	Open in IMG/M
3300026023\|Ga0207677_10354229	Not Available	1231	Open in IMG/M
3300026118\|Ga0207675_101158624	Not Available	793	Open in IMG/M
3300026121\|Ga0207683_11942025	Not Available	537	Open in IMG/M
3300026300\|Ga0209027_1195109	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300026547\|Ga0209156_10196486	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300027561\|Ga0209887_1107097	Not Available	561	Open in IMG/M
3300027873\|Ga0209814_10334906	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300027880\|Ga0209481_10558122	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300027909\|Ga0209382_11170739	Not Available	788	Open in IMG/M
3300027915\|Ga0209069_10423992	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300028597\|Ga0247820_10523192	Not Available	810	Open in IMG/M
3300028722\|Ga0307319_10224824	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300028771\|Ga0307320_10197302	Not Available	786	Open in IMG/M
3300028790\|Ga0307283_10172678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	607	Open in IMG/M
3300028809\|Ga0247824_10525773	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300028828\|Ga0307312_10607828	Not Available	723	Open in IMG/M
3300028828\|Ga0307312_11012390	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300028884\|Ga0307308_10216199	Not Available	919	Open in IMG/M
3300030943\|Ga0311366_10996133	Not Available	725	Open in IMG/M
3300031239\|Ga0265328_10269772	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Halovenus → Halovenus aranensis	654	Open in IMG/M
3300031455\|Ga0307505_10512476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	578	Open in IMG/M
3300031765\|Ga0318554_10459912	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031771\|Ga0318546_10883804	Not Available	629	Open in IMG/M
3300031819\|Ga0318568_10297923	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300031833\|Ga0310917_10512615	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300031833\|Ga0310917_10760647	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300031833\|Ga0310917_11126883	Not Available	523	Open in IMG/M
3300031890\|Ga0306925_10849869	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300031892\|Ga0310893_10395844	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300031912\|Ga0306921_11334317	Not Available	792	Open in IMG/M
3300031959\|Ga0318530_10477501	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300031997\|Ga0315278_10032579	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5024	Open in IMG/M
3300032008\|Ga0318562_10788632	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300032009\|Ga0318563_10283038	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300032018\|Ga0315272_10119937	Not Available	1225	Open in IMG/M
3300032059\|Ga0318533_11256049	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300032063\|Ga0318504_10606437	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300032205\|Ga0307472_100393494	Not Available	1156	Open in IMG/M
3300032401\|Ga0315275_12184581	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300032783\|Ga0335079_10263230	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300033551\|Ga0247830_11199259	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.74%
Host-Associated	Host-Associated	18.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.78%
Plants	Host-Associated → Plants	18.26%
Aquatic	Environmental → Aquatic	6.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.22%
Sediment	Environmental → Aquatic → Sediment	4.35%
Freshwater	Environmental → Aquatic → Freshwater	2.61%
Peat	Environmental → Terrestrial → Peat	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.91%
Loam	Environmental → Terrestrial → Soil → Loam	14.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.48%
Lake	Environmental → Aquatic → Freshwater → Lake	2.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.61%
Sand	Environmental → Terrestrial → Soil → Sand	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.87%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.61%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.22%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.74%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015086	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5c, rocky medial moraine)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_113874192	3300000858	Soil	MQRFLTSDAKYAYSPRHEPIGEVMSGETFEVECVEGFGNQFSSADDFTPERYAVAEGLKWAVTGP
Ga0063454_1016558231	3300004081	Soil	MQRFLARDAKFSYSPGHAAIGTVQPGERFEVESVEGFYNSFASASDFTPERYAEAEKLKWAVTGPVFV
Ga0062589_1012217372	3300004156	Soil	MQRFRAEDAKYAYSADHASLGTVQPREPFEVECVEGFGNTFASPDDFTPERYAVAETLKWAV
Ga0062595_1023841251	3300004479	Soil	MQRFPESDAKYAYSSAHASIGTVEPGELFEVESVEGYSGYFRSPADFNAESYAAAEAHKWAVVGPITV
Ga0062594_1024491932	3300005093	Soil	VDDSLVAEMQRFLARDAKFSYSPDHAPIGTVEPGETFEVESVEGFYNSFASASDFTPERYAEAEKLKWAMNGPITVAGAQAGD
Ga0066679_101981351	3300005176	Soil	MQRFPESDAKYAYSSEHVSIGTVQPSEVFEVESVEGYSGYFRKPEDFTPESYAQAEAVKWAVVGPITVAG
Ga0066679_109300012	3300005176	Soil	MQRFSASDAKYSYSPDHASIGTVEAGERFEVESVEGFSGYFRSPSDFTPEVYAEAEAHKWAVTGP
Ga0066675_105116012	3300005187	Soil	MQRFPESDAKYEYSPDHAPIGTVQPGEQFEVESVEGYSGYFRVPSDFTPESYAQAEAHKWAVVGPISVAGAE
Ga0066388_1051632912	3300005332	Tropical Forest Soil	MHRFGVENAKYAYSSEHASLGTVQPGEPFQVECVEGFGNSFASPDDFTPERYAVAETLKWAV
Ga0070682_1017072442	3300005337	Corn Rhizosphere	MQRFPASEAKYAYSSDHASIGTVQPDERFEVESVEGFSNYFRSPSDFTPEV
Ga0070710_113269332	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MQRFVESDAKYAYSPDHASIGTVEPGEVFEVESVEGYSGYFRSPTDFTPESYAQAEAVKWAVVGPITVAGAAAGAAV
Ga0070701_105889251	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VDDSLVAEMQRFLARDAKFSYSPDHAAIGTVEPGETFEVESVEGFYNSFAAASDFTPERYAEAEKLKWAVTGPIAVAGA
Ga0070708_1008210072	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQRFPESDAKYTYSSEHASIGTVQPGEVFEVESVEGYSGYFRKPEDFTAESYAQAEAVKWAVV
Ga0070681_116616622	3300005458	Corn Rhizosphere	MQRFRAEDAKYAYSADHASLGTVQPGEPFEVECVEGFGNTFASPDDFTPERYAVAETLKWAVTGPIAVAGAV
Ga0066695_101257161	3300005553	Soil	VQRFSAGDAKYTYSPDHASIGTVEAGERFEVESVEGWSEYFRAPSDFTPERHAEAEAHKWAVT
Ga0066905_1021505892	3300005713	Tropical Forest Soil	VQRFLASDAKYAYSPDHASIGTVEAGERFEVESVEGWSGYFRAPSDFTPERHAEAEVHKWAVVGPIAVAGA
Ga0068861_1006369242	3300005719	Switchgrass Rhizosphere	MQRFLARDAKFSYSSGHTAIGTVQPGERFEVESVEGFYNSFASASDF
Ga0066903_1009858151	3300005764	Tropical Forest Soil	VQRFPESDARYAYSAAHPSIGTVEPGEVFEVESVEGYSGYFRAPEDFNEESYAAAEAHKWAVVGPISVAGAEP
Ga0066903_1010544773	3300005764	Tropical Forest Soil	MQRFLAQDAKYAYSPEHASIGTVSAGERFEVESVEGFSGYFSSPADFTPERYAEA
Ga0066903_1053201322	3300005764	Tropical Forest Soil	MQRFPESSAKYAYSPEHSSIGIVQPGEVFEVESVEGYSGYFRSPEDFNPESYAAAEAVKWAVVGPI
Ga0066903_1075376812	3300005764	Tropical Forest Soil	MQRFVASDAKFAYSPEHASIGTVTPGERFQVESVEGFFGYFSAPADFTPERYAE
Ga0066903_1075984071	3300005764	Tropical Forest Soil	MQRFPAANAKYHYSPEHESIGTVQPGERFEVDCVEGFGNAFQTPEDWTPESYAVAEKLKWAVV
Ga0070717_106518062	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MQHFPESDAKYAYSSEHASIGTVQPGEVFEVESVEGYSGYFRRPEDFTPESFAQAEAVKWAVVGPITVAGAEA
Ga0075417_104946791	3300006049	Populus Rhizosphere	MQRFRAEDAKYAYSADHASLGTVQPREPFEVECVEGFGNTFASPDDFTPERYAVAETLK
Ga0075028_1002727051	3300006050	Watersheds	MQRFPESAAKYSYSVDHAAIGSVRPGELFEVESVEGFGNEFASAADFTRERYARAETLKW
Ga0075028_1007305451	3300006050	Watersheds	MQRFLESTAKFSYSSEHAAIGSVAPGEAFEVESVEGFGNEFASPADFTPERYARAETLKW
Ga0075028_1007911951	3300006050	Watersheds	MQRFLARDAKFSYSPGHAPIGTVQPGETFEVESIEGFYNCFASASDFTPERYAEAEKLKWAVTGPIS
Ga0070712_1000205236	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQRFPESDAKYAYSPAHAPIGTVHPGEVFQVESVEGYSGYFRSPSDFNEESYAAAEAQKWAVVGPITVAGAE
Ga0074057_118839352	3300006605	Soil	VQRFPASDAKYAYSPEHASIGTVQPGEVFEVESVEGWSGYFHSPSDFTPERHAEAEAHKWAVTGPIS
Ga0075424_1007202371	3300006904	Populus Rhizosphere	MQRFPASEAKYAYSSDHASIGTVQPGERFEVESVEGFSNYFRSPSDFTPEVYAEAEARKWAVT
Ga0075435_1009398572	3300007076	Populus Rhizosphere	MQRFLASDPKYAYSPHHDSIGSVEPGETFQVESVEGFGNEFSSPTDFTPERYA
Ga0066710_1009371073	3300009012	Grasslands Soil	MQRFSASDAKYAYSPDHASIGTVQPGERFEVESVEGFSGYFRAPADFTPEIYAEAEAH
Ga0105245_121644072	3300009098	Miscanthus Rhizosphere	MQRFPESDAKYAYSPAHAPIGTVHPGEVFQVESVEGYFGYFRSPSDFNEESYAAAEA
Ga0105242_108280092	3300009176	Miscanthus Rhizosphere	MQRFLARDAKFSYSPGHTAIGTVQPGERFEVESVEGFSNYFRSLSDFTPEVYAEA
Ga0105088_10855411	3300009810	Groundwater Sand	MQRFFEADAKYSYSLEHRSIGSVQAGESFQVESVEGFGNEFLSASDFTPERYARAETLKWAVTGPIDVEGAVAGGAV
Ga0134086_102971572	3300010323	Grasslands Soil	VQRFSASDAKYAYSPDHASIGTVEAGERFEVESVEGWSEYFRAPSDFTPERHAEAEAHKWAVTGPITV
Ga0126381_1040298681	3300010376	Tropical Forest Soil	MQRFPESDAKYAYSPEHVSIGTVQPGEVFAVESVEGYSGYFRSPEDFNAESYAAAEAHKWAVVGP
Ga0126383_134375232	3300010398	Tropical Forest Soil	MQRFPESDAKYAYSPEHPSIGTVQSGEVFAVESVEGYSGYFRSPEDFNAESYAAAEAHKWAVVGPISVAGAQP
Ga0134127_133507711	3300010399	Terrestrial Soil	MQRFLARDAKFSYSPGHSAIGTVQPGERFEVESVEGFYNSFASASDF
Ga0105246_122076372	3300011119	Miscanthus Rhizosphere	MQRFLARDAKFSYSPDHAAIGTVEPGETFEVESVEGFYNSFAAASDFTPERYAEAEKLKWAVTG
Ga0120118_10652062	3300012010	Permafrost	MQRFPESDAKYSYSSQHVSVGTVQPGEVFEVESVEGYSGYFRKPEDFTAESYAQAEAVKWAVVGPITVAGAGAGG*
Ga0137388_109867123	3300012189	Vadose Zone Soil	MQRFPESDSKYAYSPEHDSIGTVQPGEVFEVESVEGYSGYFRSPGDFTPESYALAEAVKWAVVGPITVAGAVAGGAVAVT
Ga0137364_113740902	3300012198	Vadose Zone Soil	MQRFPASDAKYVYSPNHASIGTVQPGEHFEVESVEGFSGYFRDPSDFTPEVYALAEAQKWAVTGPISVAGAKANE
Ga0137370_110153281	3300012285	Vadose Zone Soil	LQRFSASNAKYSYSPDHASIGMVEAGERFEVESVEGWSEYFRAPSDFTPERHAEAEAHKWAVTGPISVDGTTR
Ga0137387_113036441	3300012349	Vadose Zone Soil	MQRFPESDAKYAYSPEHASIGTVQPGEVFEVESVEGYSGYFRSPEDFTPESYAAAEAVKW
Ga0137366_104820342	3300012354	Vadose Zone Soil	LQRFSASNAKYSYSPDHASIGMVEAGERFEVESVEGWSEYFRAPSDFTPERHAEAGAHKWAVTGPISVDGTTRGGAVA
Ga0164309_101571031	3300012984	Soil	MQRFPESDAKYAYSPAHAPIGTVHPGEVFQVESVEGYSGYFRSPGDFTPESYALAEAVKWAVVGPITVAGAVAGGA
Ga0164308_107171171	3300012985	Soil	VQRFPASDAKYAYSPEHASIGTVQPGEVFEVESVEGWSGYFHSPSDFTPERHAEAEAHKWAVTGPISVEGARADGAVAVTVHA
Ga0164304_116646822	3300012986	Soil	MQRFRAEDAKYAYSSDHASLGAVQPGEPFEVECVEGFGNSFSSPDDFTPERYAVAETLKWAVTG
Ga0164304_117315691	3300012986	Soil	MQRFSVRDAKYAYSAAHASIGSVEPGERFHGECVEGFGNSFASASEFTPEAYGRAEELKW
Ga0167655_10246971	3300015086	Glacier Forefield Soil	MQRYLARDAKYAYSSDHASIGTVEPGEPFEVESVEGFGNSFSVPADFTPESYARAETLKWAVTGP
Ga0132257_1013247611	3300015373	Arabidopsis Rhizosphere	MQRFLTSDATYSYSPRHEPIGAVAPGETFEVECVEGFGNHFSSPDDFTPESYAVAEGLKWAVTG
Ga0132255_1047487671	3300015374	Arabidopsis Rhizosphere	MQRFRAEDAKYAYSSDHASLGTVQPGELFEVECVEGFGSSFSSPDDFTPASYAVAETLKWAVTGPIAVAGAVAG
Ga0182035_103235101	3300016341	Soil	MQRFSAIDAKYAYSSQHASIGTVAAGEVFEVESVEGWSNYFRAPSDFTSENHAKAEAVKWAVVGPISVEGAVPGGAVAVTIHAV
Ga0182037_113369191	3300016404	Soil	MQRFSAIDAKYAYSSQHASIGTVAAGEVFEVESVEGWSNYFRAPSDFTSENHAKAEAVKWAVVGPISVEGAVPGG
Ga0187785_101209161	3300017947	Tropical Peatland	MQRFLESDAKYAYSSTHASIGTVPPGEMFQVESVEGYSGYFRSPEDFNEESYAAAEAHKWAVVGP
Ga0187778_101380572	3300017961	Tropical Peatland	MPLKLSPARWYVRRPSMQRFSAIDAKYAYSPEHASIGTVAAGEVFEVESVEGWSNYFRAPSDFTSENHTKAEAVKWAVVGPISVEGAVPGG
Ga0190266_106138462	3300017965	Soil	MQRFRAEDAKYAYSSDHASLGTVQPGEPFEVECVEGFGNSFSSPDDFTPERYAVAETLKWAVTGPITVAGAVAG
Ga0184608_104447862	3300018028	Groundwater Sediment	MQRFLASDAKFSYSPGHPSIGTVQAGERFEVESVEGFYNSFASAGDFTPE
Ga0187766_107714841	3300018058	Tropical Peatland	MQRFSAIDAKYAYSSQHASIGTVAAGEVFEVECVEGWSNYFRSPSDFTSANHAKAEAVKWAVVGP
Ga0190270_118745872	3300018469	Soil	MQRFRTEDAKYAYSAEHASLGTVQRGEPFEVECVEGFGNSFASPDDFTPERYAVAETLKWAVTGPITV
Ga0190274_100281651	3300018476	Soil	MQRFLARDAKFSYSPGHAAIGTVQPGEQFEVESVEGFYNSFASASDFTPER
Ga0173481_104934021	3300019356	Soil	MQRFLARDAKFSYSPGHAAIGTVQPGEQFEVESVEGFYNSFASASDFTPERYAEAEK
Ga0193747_10958172	3300019885	Soil	MQRFLASDAKFSYSPGHPSIGTVQAGERFEVESVEGFYNSFASAGDFTPERYAEAE
Ga0193695_10568402	3300021418	Soil	MQRFLASDAKFSYSPGHASIGTVQAGERFEVESVEGFYNSFASAGDFTPERYAEAEQLK
Ga0137417_14184743	3300024330	Vadose Zone Soil	MQRFPESDAKYSYGPEHVSIGTVQPGEVFEVESVEGYSGYFRKPEDFTAESYAQAEAVKWAVVGPITVAGAAPGGASQ
Ga0207681_109587342	3300025923	Switchgrass Rhizosphere	MQRFRAEDAKYAYSSDHASLGTVQPGEPFEVECVEGFGNSFSSPDDFTPERYAVAETLKWAVTGP
Ga0207687_118443111	3300025927	Miscanthus Rhizosphere	MQRFPESDAKYAYSPAHAPIGTVHPGEVFQVESVEGYSGYFRSPSDFNEESYAAAEAQKWAV
Ga0207664_101695651	3300025929	Agricultural Soil	MQRFPESDAKYAYSSAHASIGTVEPGELFEVESVEGYSGYFRSPADFNAESYAAAEAHKWAVVGPITVAGAR
Ga0207644_103863671	3300025931	Switchgrass Rhizosphere	MQRFHESDAKYAYSPEHASIGTVHPGEVFEVESVEGYSGYFRSPEDFNPESYAAAE
Ga0207690_112891951	3300025932	Corn Rhizosphere	MQRFRAEDAKYAYSADHASLGTVQPREPFEVECVEGFGNTFASPDDFTPERY
Ga0207669_109392681	3300025937	Miscanthus Rhizosphere	MQRFLARDAKFSYSPGHTAIGTVQPGERFEVESVEGFYNSFASASDFTPERYAEAEKLKWAVTGPISVAGV
Ga0207661_100800224	3300025944	Corn Rhizosphere	MLRFRAEDAKYAYSSDHPSLGTVQPGEPFEVECVEGFGNSFSSPDDFTPERYAVAETLKWAVTGPITVAG
Ga0207677_103542291	3300026023	Miscanthus Rhizosphere	MQRFLARDAKFSYSPGHAAIGTVQPGERFEVESVEGFYNSFASASDFTPARYAEA
Ga0207675_1011586242	3300026118	Switchgrass Rhizosphere	MQRFLARDAKFSYSSGHTAIGTVQPGERFEVESVEGFYNSFASASDFTPERYAEA
Ga0207683_119420252	3300026121	Miscanthus Rhizosphere	MQRFPESDAKYAYSPAHAPIGTVHPGEVFQVESVEGYSGYFRSPSDFNEESYAAAEAQKWAVVG
Ga0209027_11951091	3300026300	Grasslands Soil	MQRFSANDAKYAYSPNHASIGTVQPGERFEVESVEGFSGYFRSPSDFTPEIYALAEAQKWAVTGPISVAGAKAN
Ga0209156_101964862	3300026547	Soil	MQRFSASDAKYSYSPDHASIGTVEAGERFEVESVEGFSGYFRSPSDFTPEVYAEAEAHKWAVTGPISVAGAKRS
Ga0209887_11070972	3300027561	Groundwater Sand	MQRFFEADAKYSYSLEHRSIGSVQAGETFQVESVEGFGHEFLSASDFTPERYARAETLKWAVTGPIDV
Ga0209814_103349062	3300027873	Populus Rhizosphere	MQRFRAEDAKYAYSADHASLGTVQPREPFEVECVEGFGNSFSSSDDFTPERYAVAETLKWAVTGPISVAGAVAG
Ga0209481_105581221	3300027880	Populus Rhizosphere	MQRFRAEDAKYAYSADHASLGTVQPGEPFEVECVEGFGNTFASPDDFTPERYA
Ga0209382_111707391	3300027909	Populus Rhizosphere	MQRFRAEDAKYAYSADHASLGTVQPREPFEVECVEGFGNTFASPDDFTPER
Ga0209069_104239922	3300027915	Watersheds	VQRFLARDAKYSYSPGHASIGSVEAGERFEVEAVEGFSNSFSSAADFPPERY
Ga0247820_105231922	3300028597	Soil	MQRFRAEDAKYAYSADHASLGTVQPREPFEVECVEGFGNTFASPDDFTPERYAVAETLKWAVTGPIAVPGAVAG
Ga0307319_102248241	3300028722	Soil	MQRFAASGAKYAYSPEHASIGTVQPGERFEVESVEGFSGYFRSPSDFTSETYAEAEAHKWAVTGPIAVAGAEA
Ga0307320_101973021	3300028771	Soil	MQRFAASGAKYAYSPEHASIGTVQPGERFEVESVEGFSGYFRSPSDFTPETYAEAEAHKWAVTGPIAVAG
Ga0307283_101726781	3300028790	Soil	MQRFLARDAKFSYSPGHAAIGTVQPGEQFEVESVEGFYNSFASASDFTPERYAEAEKLKWAVTGPISVA
Ga0247824_105257732	3300028809	Soil	MQRFRAEDAKYAYSADHASLGTVRPGEPFEVECVEGFGNSFSSPDDFTPERYAVAETLKWAVTGPISVAGAVAGGAV
Ga0307312_106078282	3300028828	Soil	MQRFPASDAKYSYSPDHASIGTVQPGERFEVESVEGFSGYFRAPSDFTPELYAVAEAH
Ga0307312_110123902	3300028828	Soil	MQRFLASDAKYSYSPDHPSVGTVQPGEPFEVESVEGFGNEFSSASDFTPERYARAETLKWAVTGPIDVA
Ga0307308_102161991	3300028884	Soil	MQRFPESDAKYAYSPEHASIGTVQPGEVFEVESVEGYSGYFRSPEDFTLESYAAAE
Ga0311366_109961331	3300030943	Fen	MQRFLASDAKYSYSPHHASIGTVQPGERFEVESVEGFSNYFRSAGDFTPERYAEAEAVKWAVTGPITVAGAEPGGAV
Ga0265328_102697721	3300031239	Rhizosphere	MQRFLASDAKYSYSPHHASIGTVQPGERFEVESVEGFSNYFRSAEDFTPERYAEAEAVKWAVTGPITVAGAEPGGAVA
Ga0307505_105124761	3300031455	Soil	MQRFLARDAKFSYSSGHTAIGTVQPGERFEVESVEGFYNSFASASDFTPERYAEAEKLKWAV
Ga0318554_104599122	3300031765	Soil	MQRFSAIDAKYAYSSQHASIGTVAAGEVFEVESVEGWSNYFRMPSDFTCENHAKAEAVKWAVVGPISVEGAVPG
Ga0318546_108838042	3300031771	Soil	VQRFPESEAKYAYSPAHPAIGTVQPGEVFEVESVEGYSGYFRSPEDFTDESQAAAEAHK
Ga0318568_102979231	3300031819	Soil	MQRFSAIDAKYAYSSQHASIGTVAAGEVFEVESVEGWSNYFRMPSDFTCENHAKAEAVKWAVVGPISVEGAVPGGAVAV
Ga0310917_105126151	3300031833	Soil	MQRFSAIDAKYAYSSQHASIGTVAAGEVFEVESVEGWSNYFRMPSDFTCENHAKAEAVKWAVVGPISVEGAVPGGAVA
Ga0310917_107606471	3300031833	Soil	MQRFPESDAKYAYSPEHASVGTVQPGEQFEVECVEGYSGYFRSPADFTPESYAAAEEHKWAVTGPI
Ga0310917_111268832	3300031833	Soil	MQRFLESDAKYTYSPAHASIGTVQPGEVFQVESVEGYSGYFRSAEDFHAESYAAAEAHKW
Ga0306925_108498691	3300031890	Soil	MQRFSAIDAKYAYSPQHASIGTVAAGEVFEVESVEGWSNYFRSPSDFTSENHAKAEAVKWAVVGPISVEGAVRGGAVAVTIHA
Ga0310893_103958441	3300031892	Soil	MQRFRAEDAKYAYSADHASLGTVQPREPFEVECVEGFGNTFASPDDFTPERYAVAETLKWAVTGPIAVAGAVAGGAIA
Ga0306921_113343172	3300031912	Soil	MQRFPESDAKYAYSPEHPSIGTVQPGEVFAVESVEGYSGYFRSPEDFTAESYAAAEAHKWAVVGPISVAGT
Ga0318530_104775012	3300031959	Soil	MQRFSAIDAKYAYSSQHASIGTVAAGEVFEVESVEGWSNYFRMPSDFTCENHAKAEAVKWAVVGPISVEGAVPGGAVAVTIHG
Ga0315278_100325791	3300031997	Sediment	MQRFLERDAKYSYHSGHASIGTVQPGELFEVESVEGFGNEFASAVDFTSERY
Ga0318562_107886321	3300032008	Soil	MQRFSAIDAKYAYSSQHASIGTVAAGEVLEVESVEGWSNYFRMPSDFTCENHAKAEAVKWAVVGPISVEGA
Ga0318563_102830381	3300032009	Soil	MQRFSAIDAKYAYSSQHASIGTVAAGEVFEVESVEGWSNYFRAPSDFTSENHAKAEAVKWAVVGPISVEGAVPGGAVAV
Ga0315272_101199372	3300032018	Sediment	MQRFLERDAKYSYSSGHASIGTVQPGELFEVESVEGFGNELASAEEFTPAR
Ga0318533_112560491	3300032059	Soil	MQRFSAIDAKYAYSPEHASIGTVAAGEVFEVECVEGWSNYFRAPSDFTSENHAKAEAVKWAVVGPISVEGAVPGG
Ga0318504_106064372	3300032063	Soil	MQRFPESDAKYAYSPEHASVGTVQPGEQFEVECVEGYSGYFRSPADFTPESYAAAEEHKWAVTGPISV
Ga0307472_1003934941	3300032205	Hardwood Forest Soil	MQRFIARDAKFSYSPDHASIGTVQPGETFEVESVEGFYNSFSSPSDFTPERYAEAEAVKWAVTGPITVAGTEQD
Ga0315275_121845813	3300032401	Sediment	MQRFFERDAKYSYSSGHASIGTVQPGELFEVESVEGFGNELASAEDFTPERYARAE
Ga0335079_102632301	3300032783	Soil	MQRFTESDAKYAYDPAHASIGAVQPGERFEVECVEGYSGYFRSPADFTPESYAAAEAVKWAVTGP
Ga0247829_117093842	3300033550	Soil	VQRFLATDAKYSYSPDHPSIGTVEAGELFEVESVEGWSEYFRAPSDFTPERHAEA
Ga0247830_111992592	3300033551	Soil	VQRFLATDAKYSYSPDHPSIGTVEAGELFEVESVEGWSEYFRAPSDFTPERHAEAEAHKWAVTGPIAVDGARRGGAVAV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080335

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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