Metagenome / Metatranscriptome Family F080429

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080429
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	137 residues
Representative Sequence	RMVAAGKSQRELATYVFDTHGCKNCHTMGQNSKLGFTERGKQRAQGFEGCISMLTAMNLIAQVADDKRSTQQRQKAARFEEFGCTTCHKITPGKMGLTEIGTKLTHLHLGCVDVEKLVASKPASQH
Number of Associated Samples	83
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	36.61 %
% of genes near scaffold ends (potentially truncated)	61.74 %
% of genes from short scaffolds (< 2000 bps)	83.48 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.391 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.478 % of family members)
Environment Ontology (ENVO)	Unclassified (28.696 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.130 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.16% β-sheet: 9.09% Coil/Unstructured: 46.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF02446	Glyco_hydro_77	11.30
PF00069	Pkinase	3.48
PF07638	Sigma70_ECF	2.61
PF13229	Beta_helix	1.74
PF05048	NosD	1.74
PF00456	Transketolase_N	0.87
PF13519	VWA_2	0.87
PF13637	Ank_4	0.87
PF01641	SelR	0.87
PF00375	SDF	0.87
PF00805	Pentapeptide	0.87
PF13620	CarboxypepD_reg	0.87
PF01638	HxlR	0.87
PF01970	TctA	0.87
PF00004	AAA	0.87
PF07676	PD40	0.87
PF03938	OmpH	0.87
PF08447	PAS_3	0.87
PF00723	Glyco_hydro_15	0.87
PF00494	SQS_PSY	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	13.91
COG1640	4-alpha-glucanotransferase	Carbohydrate transport and metabolism [G]	11.30
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.61
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.87
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.87
COG1562	Phytoene/squalene synthetase	Lipid transport and metabolism [I]	0.87
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.87
COG1784	TctA family transporter	General function prediction only [R]	0.87
COG2825	Periplasmic chaperone for outer membrane proteins, Skp family	Cell wall/membrane/envelope biogenesis [M]	0.87
COG3333	TctA family transporter	General function prediction only [R]	0.87
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.87
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.39 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	90.43 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	80.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.83 %
Unclassified	root	N/A	2.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.00 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.61 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	2.61 %
Unclassified	root	N/A	2.61 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.00 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2.61 %
Unclassified	root	N/A	2.61 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.00 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2.61 %
Unclassified	root	N/A	2.61 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	80.00 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2.61 %
Unclassified	root	N/A	2.61 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10574597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300004139\|Ga0058897_11135297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300005331\|Ga0070670_100990943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300005332\|Ga0066388_102296634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300005435\|Ga0070714_100014102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6413	Open in IMG/M
3300005435\|Ga0070714_100871319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300005534\|Ga0070735_10063007	All Organisms → cellular organisms → Bacteria → Acidobacteria	2412	Open in IMG/M
3300005537\|Ga0070730_10433633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300005542\|Ga0070732_10046482	All Organisms → cellular organisms → Bacteria	2503	Open in IMG/M
3300005542\|Ga0070732_10102377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1687	Open in IMG/M
3300005542\|Ga0070732_10536180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300005577\|Ga0068857_101971432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300006028\|Ga0070717_10298125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1433	Open in IMG/M
3300006173\|Ga0070716_100085360	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300006354\|Ga0075021_10038475	All Organisms → cellular organisms → Bacteria	2741	Open in IMG/M
3300006854\|Ga0075425_101660882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300006893\|Ga0073928_10000931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	60662	Open in IMG/M
3300006954\|Ga0079219_11309147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300009088\|Ga0099830_11288773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300009088\|Ga0099830_11302608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300009098\|Ga0105245_11224700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300009148\|Ga0105243_12332219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300010046\|Ga0126384_10986359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300010048\|Ga0126373_10070109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	3165	Open in IMG/M
3300010048\|Ga0126373_10781193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300010048\|Ga0126373_11160063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300010048\|Ga0126373_11573201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300010359\|Ga0126376_11397656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300010361\|Ga0126378_12536819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300010366\|Ga0126379_12390651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300010366\|Ga0126379_12422529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300010366\|Ga0126379_12800080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300010376\|Ga0126381_100263722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2342	Open in IMG/M
3300010376\|Ga0126381_104552519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300010379\|Ga0136449_104459521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300011120\|Ga0150983_11617381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1803	Open in IMG/M
3300011120\|Ga0150983_11987224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300012096\|Ga0137389_11367409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300012189\|Ga0137388_10850628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300012350\|Ga0137372_11192600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300012951\|Ga0164300_11147452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300012971\|Ga0126369_10871987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300012971\|Ga0126369_11961982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300012971\|Ga0126369_12399050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300013307\|Ga0157372_12367601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300014325\|Ga0163163_11048886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300014882\|Ga0180069_1003139	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	3359	Open in IMG/M
3300016294\|Ga0182041_12331194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300016371\|Ga0182034_11844115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300016404\|Ga0182037_10297216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300016404\|Ga0182037_12039655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300017823\|Ga0187818_10418768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300017937\|Ga0187809_10159379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300017942\|Ga0187808_10175343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300017943\|Ga0187819_10103867	All Organisms → cellular organisms → Bacteria → Acidobacteria	1697	Open in IMG/M
3300018001\|Ga0187815_10188617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300018007\|Ga0187805_10262499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300018012\|Ga0187810_10272201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300020579\|Ga0210407_10120808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2004	Open in IMG/M
3300020579\|Ga0210407_10250018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1381	Open in IMG/M
3300020579\|Ga0210407_10868061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300020580\|Ga0210403_10093297	All Organisms → cellular organisms → Bacteria	2437	Open in IMG/M
3300020580\|Ga0210403_10595479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300020581\|Ga0210399_10867281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300020582\|Ga0210395_11257281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300020583\|Ga0210401_10000401	All Organisms → cellular organisms → Bacteria	53782	Open in IMG/M
3300020583\|Ga0210401_10001053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	32948	Open in IMG/M
3300020583\|Ga0210401_10760861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300020583\|Ga0210401_11209685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300021170\|Ga0210400_10804930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300021180\|Ga0210396_10009059	All Organisms → cellular organisms → Bacteria → Acidobacteria	9419	Open in IMG/M
3300021180\|Ga0210396_10221006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1689	Open in IMG/M
3300021401\|Ga0210393_10475467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1020	Open in IMG/M
3300021403\|Ga0210397_10818813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300021405\|Ga0210387_10642236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300021406\|Ga0210386_11648991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300021406\|Ga0210386_11748546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300021420\|Ga0210394_10002440	All Organisms → cellular organisms → Bacteria	25537	Open in IMG/M
3300021559\|Ga0210409_10260183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1570	Open in IMG/M
3300021559\|Ga0210409_10337076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1356	Open in IMG/M
3300021559\|Ga0210409_10483835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300021560\|Ga0126371_12687625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300022557\|Ga0212123_10001259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	72255	Open in IMG/M
3300025906\|Ga0207699_10797403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300025944\|Ga0207661_10696071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300026089\|Ga0207648_11980424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300027667\|Ga0209009_1027389	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300027842\|Ga0209580_10057208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1828	Open in IMG/M
3300027842\|Ga0209580_10105831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1363	Open in IMG/M
3300027857\|Ga0209166_10380103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300027898\|Ga0209067_10262352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300027986\|Ga0209168_10047613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2302	Open in IMG/M
3300028906\|Ga0308309_10480288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1073	Open in IMG/M
3300029636\|Ga0222749_10621710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300031128\|Ga0170823_14325994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300031231\|Ga0170824_102829432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300031231\|Ga0170824_117102382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1638	Open in IMG/M
3300031231\|Ga0170824_123838989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300031231\|Ga0170824_126066690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300031446\|Ga0170820_12941671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1398	Open in IMG/M
3300031469\|Ga0170819_17838959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300031474\|Ga0170818_107395814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300031679\|Ga0318561_10714536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300031754\|Ga0307475_11547984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300031823\|Ga0307478_10197738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1616	Open in IMG/M
3300031823\|Ga0307478_11505801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300031962\|Ga0307479_10356499	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300031962\|Ga0307479_11122494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300032160\|Ga0311301_12828057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300032261\|Ga0306920_101202105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300032261\|Ga0306920_101648647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300032892\|Ga0335081_11146212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.04%
Host-Associated	Host-Associated	6.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.61%
Aquatic	Environmental → Aquatic	10.43%
Plants	Host-Associated → Plants	6.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.61%
Freshwater	Environmental → Aquatic → Freshwater	6.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.35%
Sediment	Environmental → Aquatic → Sediment	2.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.74%
Roots	Host-Associated → Plants → Roots	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.57%
Loam	Environmental → Terrestrial → Soil → Loam	12.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.91%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.48%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.74%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_105745971	3300001593	Forest Soil	MVFERRTNVRVCSLALAAMVLGPSGTPAPAQQLDRMIAAGKSQRELAKYVFSTHGCKNCHIMGASGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDDQQRSPEQRQKAARFQDFGCTTCHKIIPGKMGLTDLGAKLTHLHLGC
Ga0058897_111352971	3300004139	Forest Soil	LDRMVAAGKSPRELCQYVFDTHGCNSCHTVGENGKLGFTAKGKQLTQGFEGCIRTLTAMNLIAQVPDNQRSPDQRKTAARFNEFGCTLCHKIIPGKMGLTDLGAKLTSLHLGCVDVEKLVASKPVQK*
Ga0070670_1009909431	3300005331	Switchgrass Rhizosphere	ELARYVFDTHGCKSCHVIGHDGKLGYTAKGKERAEGFEGCIRMLTAMTVIVQVPEDKRSPQQQQKAARFDEFGCTACHKLSPGKLGMTEMGAKLSHLHLGCVEVEKLVAGSPASQR*
Ga0066388_1022966341	3300005332	Tropical Forest Soil	SLPPSTAALDRMVAAGKSQRELGQYVFDTHGCRNCHTMGHDGKLGFTEKGKQRAQGFEGCINMLTAMTVIVQVPEDRRSVEQRRKAERFAEFGCTTCHKLSPGKLELTDVGAKLAHLHLGCVEVEKLVAASPSAQR*
Ga0070714_1000141026	3300005435	Agricultural Soil	MRTYSLTLAALVVTLCGSSALAQQELDRMVAEGKSQRELARYVFNTHGCKSCHSMGQSGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEKQRSPQQRQKAARFEEFGCTTCHKIIPGKMGLTDIGAKLTHLHLGCVDVEKLVAARP*
Ga0070714_1008713191	3300005435	Agricultural Soil	YVFDTHGCKSCHTMGHDGKLGFTEKGKERAKGFEGCINMLVAMTVIVQVADDKRTPQQRDKAKRFAEFGCTACHKMAPGKLGLTEVGAKLQHLHLGCVDVERFVSSQARPQR*
Ga0070711_1000208946	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLIVLLVATAAIALFAQNQNEKASASEAALDQMIAAGKNPQELAQYVFDTHGCKSCHTMGHDGKLGFTEKGKERAKGFEGCINMLVAMTVIVQVADDKRTPQQRDKAKRFAEFGCTACHKMAPGKLGLTEVGAKLQHLHLGCVDVERFVSSQARPQR*
Ga0070735_100630074	3300005534	Surface Soil	MPRVFCVLISTASLTLLAQQEASRTQDPSFDRMVAAGKSSQELAKYVFDTHGCKSCHTIGKEGKLGYTEKGKERAKGFEGCINMLTAMTVIVQTPEEKRSSQQREKAQRFEEFGCTACHKLTPGKLGLTEVGAKLQHLHLGCVDVEKLTSSETASKR*
Ga0070730_104336332	3300005537	Surface Soil	MKLSLLTIFLGIVAAVAQQSQTGAQLDRMIKSGASPKELAKYVFDTHGCQSCHTIGHDGKLGFTAKGVERRKGSEGCIRMLTAMTVIVQVPEGERTDQQRQKAHRFEEFGCTQCHQLTPGKLSLSEVGAKLAHLHLGCVDVEKLTSSGSKQATE*
Ga0070732_100464823	3300005542	Surface Soil	MLAAMGMILPAATAQDKQLDRMIAAGKSQKELAQYLFNTHGCKSCHTMGQNGKLGFTEKGKERAKAFEGCISMLTAMNLIAQVDEKQQSPQQRQKAARFEEFGCTACHKIIPGKMGLTDIGAKLTHLHLGCVDVEKLVSTR*
Ga0070732_101023772	3300005542	Surface Soil	LVATAAIALLAQNQNEKASAPDAALDRMIAAGKNPQELAQYVFDTHGCKSCHTVGHDGKLGFTEKGQERAKGFEGCISMLAAMTVIVQVADDKRTPQQRDKAKRFAEFGCTACHKLAPGALGLTQVGAKLQHLHLGCVNVERLVSSQASPQR*
Ga0070732_105361801	3300005542	Surface Soil	KELAQYVFDTHACKNCHTIGSDGKLGFTAKGKEQAQGFEGCIRILTAMTVIVQVPEDKRSTQQRQKAERFQDFGCTACHKLTPGKLGLTEVGAKLAHLHLGCVDVEKLVASGPQR*
Ga0068857_1019714321	3300005577	Corn Rhizosphere	FDTNGCKSCHTMGHDGKLGYTAKGKERAQGFEGCIRMLTAMTVIVQVPEDKRSTQQRQKSARFDEFGCTACHKLSPGKLGMTEMGAKLSHLHLGCVEVEKLVAASPASQR*
Ga0070717_102981252	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRYSIVAVLFTVQVALAQSQNAPAGSDPALDKMVATGKSPQELAKYVFDTHGCKSCHTIGRDGKLGYTDKGKERAQNFEGCIKMLTAMTVIVQTPEDKRTAQQRSKAARFEEFGCTSCHKLTPGAMALTEMGAKLSHLHLGCVEVEKLTSTKAKN*
Ga0070716_1000853602	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRTYSLALAALVVTLCGSLALAQQELDRMVAEGKSQRELARYVFNTHGCKSCHSMGQSGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEKQRSPQQRQKAARFEEFGCTTCHKIIPGKMGLTDIGAKLTHLHLGCVDVEKLVAARP*
Ga0075021_100384751	3300006354	Watersheds	SQQELAQYVFDSHGCKSCHTVGQNGKLGFTERGMQIGKGFEGCISMLTAMNLIAQVPDSQRSAQQRQKAARFEEFGCTVCHRIAPGKMGLTPVGEKLTHLHLGCVNVEKLVASEPARHP*
Ga0075425_1016608821	3300006854	Populus Rhizosphere	VSNNQASAQRSSTTLDRMIAAEKGPQELAQYVFDTHGCKTCHTMGHDGKLGYTEKGKQRAAGFEGCINMLTAMTVIVQVPEQKRSPQQRQKAAQFDEFGCTSCHKLTPGKLALTEVGAKLARLHLGCVDIEKLTSSGDDRKN*
Ga0073928_1000093112	3300006893	Iron-Sulfur Acid Spring	MRVCLLALAAMAVIFQSAPAADQQLDRMITEGKSQRKLAQYVFNTHGCKNCHTMGASGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDDQQRSPEQRQKAGRFEEFGCTTCHKIIPGKMGLTDLGAKLTHLHLGCVDVEKFVATKH*
Ga0079219_113091472	3300006954	Agricultural Soil	YVFDTHGCKGCHTLGHDGKLGYTEKGKQRAAGFEGCINMLTAMTVIVQVPEDRRSSQQRQRAAHFEEFGCTACHRLSPGKLSLTEVGAKLKHLHLGCVDIEKLTSQRGPQN*
Ga0099830_112887731	3300009088	Vadose Zone Soil	QTLQTNSLALAAIVLTLCASSALAQQELDRMVAEGKSQRELAQYVFNTHGCKSCHTMSQNGGQSGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEQQRSPQQRRKAARFEEFGCTTCHKIVPGKMGLTDIGAKLTHLHLGCVDVEKLVAAKP*
Ga0099830_113026082	3300009088	Vadose Zone Soil	AGKSPRELGQYVFDTHGCNSCHTVGENGKLGFTAKGKQLTQGFEGCIRTLTAMNLIAQVPDNQRSPDQRRTAARFSEFGCTMCHKIIPGKMGLTDLGTKLTSLHLGCVDVEKLVASKPVQK*
Ga0105245_112247002	3300009098	Miscanthus Rhizosphere	FDTHGCKACHTVGQNGKLGFTAKGKLTAGGFEGCIRLLTDMTVIAQTPEKQRSAQQQKKASRFQEFGCTFCHQITPGRLSLTDVGTKLSHLHLGCVDVQKAVAISVPR*
Ga0105243_123322191	3300009148	Miscanthus Rhizosphere	HKSQQEMAQYVFDTHGCKACHTVGQNGKLGFTAKGKQTAGGFEGCIRLLTDMTVIAQTPERQRSAQQQKKASRFQEFGCTFCHQITPGRLSLTDMGAKLSHLHLGCVDVQKAVAISVPR*
Ga0126384_109863592	3300010046	Tropical Forest Soil	MVAEGKSQRELGQYVFDTHGCRTCHTMGHDGKLGFTDKGKQRAKGFEGCINMLTAMTVIVHLPEDRRSPEQRQKAERFAEFGCTTCHKLSPGKLELTDVGAKLAHLHLGCVEVEKLVAASPSA
Ga0126373_100701094	3300010048	Tropical Forest Soil	MIGAGKNQQELAQYVFNTHGCKSCHTMGRNGKLGFTARGTERAKGFEGCINMLTAMTVIVQVPGDRRSSEQRQKVERFTEFGCTSCHQITPGRLGLTDVGAKLQHLHLGCVDVEKIVASSSSPQH*
Ga0126373_107811932	3300010048	Tropical Forest Soil	MKRIAFLFLAVASLVLAQKSQDASAALDRMIADGKTPQELAKYVFDAHGCKSCHTIGHDGKLGYTERGKERAKGFEGCINMLTSMTVIVQLSDEKRTSEQRERAAKFKEFGCTACHQLSPAKLELTEVGAKLKHLHLGCVDVEKLTSSQAEKR*
Ga0126373_111600632	3300010048	Tropical Forest Soil	MTAAGQSQREIARYVFDTHGCKSCHVAGQDGKLGLTEKGRQISKGFEGCIPMLSAMNLIAQVSDDQRTPDQKKKAARFEEFGCTFCHKITPGKMGLTEIGAKLSHMHLGCVQVEQQLASNR*
Ga0126373_115732011	3300010048	Tropical Forest Soil	MIKTGKSPLELAQFVLDTQGCKNCHTIGHVGKLGYTEQGKERAKGFEGCVDMLTAMTVVVQVPEEKRSPRQRDKAHRFEEFGCTSCHKLTPGKLTLTDMGAKLANLHLGCVEVEKLTSSPAGK*
Ga0126376_113976563	3300010359	Tropical Forest Soil	ASGKTQRQQAMYVFDNHGCKGCHTVGQDGKLGFTAKGKQLTQGFEGCIRTLTAMNLIAQVPGNQRSADQRKTAARFEEFGCTLCHKIIPGKMGLTELGTKLTALHLGCVDVEKLVASKAAGGR*
Ga0126378_125368191	3300010361	Tropical Forest Soil	KELAQYIFDTHGCKTCHTIGHDGKLGFNENGKERAKGFEGCINMLTAMTVIVQVPQDKRSPEQRQKAQRFEEFGCTACHKLTPGKLGLTDVGAKLSHLHVGCVEVEKLLSSRSGPARN*
Ga0126379_123906511	3300010366	Tropical Forest Soil	MVAEGKSQRELGQYVFDTHGCRTCHTMGHDGKLGFTDKGKQRAKGFEGCINMLTAMTVIVHLPEDRRSPEQRQKAERFAEFGCTTCHKLSPGKLELTDV
Ga0126379_124225291	3300010366	Tropical Forest Soil	MATAKLDQMVAAGSSPKELAQYVFDTHGCKTCHTIGHDGKLGFTAKGEERAKGFEGCIKMLTAMTVVVQTPENKRTALQVQKAARFEEFGCTACHKLTPGKLGLTEVGAKLSHLHLGCVEVEKLTSSGPQVGGRR*
Ga0126379_128000802	3300010366	Tropical Forest Soil	MIGAGKNQQELAQYVFNTHGCKSCHTMGRNGKLGFTARGTERAKGFEGCINMLTAMTVIVQVSGDKRSSEQRQKVERFTEFGCTSCHQITPGRLGLTDVGAKLQHLHLGCVDVEKNVAS
Ga0126381_1002637222	3300010376	Tropical Forest Soil	MRGKMNHRRLLLFLSAAVTIWAAQNASDAKLDKMIATGKSPQQLAKYVFDTHGCKGCHTIGENGKLGYTEKGRERAKGFEGCINMLTAMTVIAQTADDKRTSQQTQKALRFKEFGCTDCHLVTPGKLALTDVGAKLAHLHLGCVDVEKLTSSQSSHRRP*
Ga0126381_1045525191	3300010376	Tropical Forest Soil	LDKMIAAGKSQEDLARYVFDTHGCKSCHTTGRDGKLGYTEKGKKLAQGFEGCINMLTAMTVIVQSPQEKRTAQQTQKAARFEEFGCTACHKVTPGKLALTEIGAKLSHLHLGCVDVEKLTSSQN*
Ga0136449_1044595211	3300010379	Peatlands Soil	GCKNCHTLGHDGKLGYTELGKQRSQGFEGCIDMLTAMTVVVQVLPEKRSQQQREKAQRFEEFGCTACHKLAPGKLALTEIGTRLAALHLGCVDLEKLTSSSGASQN*
Ga0150983_116173813	3300011120	Forest Soil	MIFIVAAAVTLFAQNQKPSPSDAALDRMIAAGKSPQELAEYVFNTHGCQSCHTMGHDGKLGFTDRGKERAKGFEGCISMLTAMTVIVQVPGDQRSARQREKVARFEEFGCTTCHKITPGKLDLTQVGAKLTHLHLGCVDVEKLVASQPDHNN*
Ga0150983_119872241	3300011120	Forest Soil	RMVAAGKSQRELATYVFDTHGCKNCHTMGQNSKLGFTERGKQRAQGFEGCISMLTAMNLIAQVADDKRSTQQRQKAARFEEFGCTTCHKITPGKMGLTEIGTKLTHLHLGCVDVEKLVASKPASQH*
Ga0137389_113674091	3300012096	Vadose Zone Soil	QYVFDTHGCKSCHTIGHDGKLGFTEKGKERAQGFEGCIRMLTAMTVVVQLPENKRSPQQRQKAEHFEEFGCTTCHQLSPGKLGLTEVGAKLEHLHLGCVDIEKLTSSRATP*
Ga0137388_108506281	3300012189	Vadose Zone Soil	FISQLPPLVRLSWFSDGEQTLQTNSLALAAIVLTLCASSALAQQELDRMVAEGKSQRELAQYVFNTHGCKSCHTMSQNGGQSGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEQQRSPQQRRKAARFEEFGCTTCHKIVPGKMGLTDIGAKLTHLHLGCVDVEKLVAAKP*
Ga0137372_111926001	3300012350	Vadose Zone Soil	DRLVAAGKSQQELARYVFDTHGCKSCHTLGQNGKLGFTDKGKQIAQGFEGCISMLTAMNLIAQVAPEQRSPQQRQKAARFEEFGCTTCHKIVPGKMGLTDLGATLAHLHMGCVEVEKVVAGRSTPQR*
Ga0164300_111474521	3300012951	Soil	QGQNTSQTQTSTQAASATLDRMVATGRSPEELAKYVFETHGCKSCHTMGHDGKLGYTEKGKQRAAGFEGCIKMLTAMTVIVQVPEEKRSAQQRDRAARFEEFGCTTCHRVAPGKLALTDFGSKLAHLHLGCVDIEKLMSNQVGQHK*
Ga0126369_108719872	3300012971	Tropical Forest Soil	SSAALDRMAAEGKSQRELGQYVFDTHGCRTCHTMGHDGKLGFTDKGKQRAKGFEGCINMLTAMTVIVHLPEDRRSPEQRQKAERFAEFGCTTCHKLSPGKLELTDVGAKLAHLHLGCVEVEKLVAASPSAQR*
Ga0126369_119619822	3300012971	Tropical Forest Soil	MIANGTSQQAMAQYVFDTHGCRSCHTVGRDGKLGFTEKGKQVATGFEGCISMLTAMTRVAQVRENERSPQQRQTAARFEEFGCTLCHKMAAGKMGLTDVGSRLTHLHLGCV
Ga0126369_123990502	3300012971	Tropical Forest Soil	KDQRELARYVFDTHGCTNCHTMGADGKLGFTAKGKQRAQGFEGCISMLTAMTVIVQVPKDQRSPQQRQRAERFEEFGCTSCHKISPGKLGLTELGAKLTHLHLGCVDVEKLVANAPASRR
Ga0157372_123676012	3300013307	Corn Rhizosphere	ASGKNPQELAQYVFDTHGCKGCHTLGHDGKLGYTEKGKQRAAGFEGCINMLTAMTVIVQVPEDKRSSQQRHRAARFEEFGCTACHRLSPGKLSLTEVGAKLKHLHLGCVDIEKLTSQRGPQN*
Ga0163163_110488861	3300014325	Switchgrass Rhizosphere	GLSYTVGFAQVNQTASKLDQMVAKNASPKELARYVFDTHGCKSCHVIGHDGKLGYTAKGKERAEGFEGCIRMLTAMTVIVQVPEDKRSPQQQQKAARFDEFGCTACHKLSPGKLGMTEMGAKLSHLHLGCVEVEKLVAGSPASQR*
Ga0180069_10031391	3300014882	Soil	MAAAGKSQQEIAQYVFETHGCRSCHTVGQDGKLGFTEKGKQVGRGSEGCIAMLTAMTLVAQVPEEQRSPQQRKKAARFEESGCTFCHWIVPGKTGLTEVGSRLRHLHMGCVDVEKLVANRPAQKR*
Ga0182041_123311941	3300016294	Soil	VSQTTVLAQRYPTASSSQASPQQTADTLDRMIAAGKGPRELAQYIFDTKGCKNCHTIGQDGKLGFTDLGKGRAQGYEGCISMLTAMTVITKVPKDQRSPAQRRRAEGFEEFGCTTCHKPANGKMALTEVGAKLSDLHLGCVDIEKLASSRTAARN
Ga0182034_118441151	3300016371	Soil	SARPTAAKLDQMAAAGASAKELAQYVFDTHGCKTCHTIGHDGKLGFTPKGKERAKGFEGCINMLTAMTVIVQVPEDKRSPQQVQKAARFQEFGCTACHKLAPGKMGLTEVGAKLSNLHLGCVELEKLTSGGQ
Ga0182037_102972162	3300016404	Soil	MIAAHKSQQELAKYVFDTHGCKSCHTVGQNGKLGFTSRGLQVGQDFEGCISMLKTMTLVAEVPDNRRSSQQRQKAARFEDFGCTFCHKITPGKLGLTDLGSKLTHLHLGCVDVQKLVASRPIPHN
Ga0182037_120396551	3300016404	Soil	GCALSRTAPGQTAASQESARQTAAKLDQMAAAGASPKELAQYVFDTHGCKTCHTIGHDGKLGFTAKGEERAKGFEGCIRMLTAMTVVVQTPENKRSPEQAQKAARFQEFGCTACHKLTPGKLGLTEVGAKLSHMHLGCVELEKLTSTGAQAVGGR
Ga0187818_104187681	3300017823	Freshwater Sediment	KYLFNTHGCKNCHTVGHDGKLGFTAKGTERTKGFEGCINMLTAMTVLVQVPEDKRSPQQRQKAERFEEFGCTACHKITPGKLDLTEIGTKLAHLHLGCVDVQKALATSPLKSSAY
Ga0187809_101593792	3300017937	Freshwater Sediment	AKYLFNTHGCKNCHTVGRDGKLGFTAKGTERAQGFEGCTNMLTAMTVLVQVPEDKRSPQQRQKAERFEEFGCTACHKITPGKLDLTEIGMKLAHLHLGCVDVQKVLATSPLKSSAY
Ga0187808_101753431	3300017942	Freshwater Sediment	VGKSQQELAKYLFSTHGCKNCHTVGHDGKLGFTAKGTERAKGFEGCINMLTAMTVLVQVSEDKRSPQQRQKAERFEEFGCTACHKITPGKLDLTEIGTKLAHLHLGCVDVQKALATSPLKSSAY
Ga0187819_101038671	3300017943	Freshwater Sediment	SQPPASASDATLDRMVAAGKSPQELAKYVFDTHGCKGCHTIGQDGKLGYTEKGKQRAEGFEGCIKMLTAMTVIVQVPEEKRSPQQRQKAARFEEFGCAACHKLTPGKLELTEVGARLKHLHLGCVEIEKLTSPQPSARN
Ga0187815_101886172	3300018001	Freshwater Sediment	ALDRMIGVGKSQQELAKYLFSTHGCKNCHTVGHDGKLGFTAKGTERTKGFEGCINMLTAMTVLVQVAEDKRSPQQRQKAERFEEFGCTACHKITPGKLDLTEIGTKLAHLHLGCVDVQKALATSPLKSSAY
Ga0187805_102624991	3300018007	Freshwater Sediment	ETSATLDRMMASGKTTQDLAKYVFDTHGCKSCHTVGHDGKLGYTERGKERAKGFEGCINMLTSMTVIVQLSDEKRTSEQRERAAKFDEFGCTACHKLTPGKLELTQIGAKLAHMHLGCVDIEKLTSSGAEKH
Ga0187810_102722011	3300018012	Freshwater Sediment	ALDRMIGVGKSQQELAKYLFSTHGCKNCHTVGHDGKLGFTAKGTERAKGFEGCINMLTAMTVLVQVSEDKRSPQQRQKAERFEEFGCTACHKITPGKLDLTEIGTKLAHLHLGCVDVQKALATSPLKSSAY
Ga0210407_101208081	3300020579	Soil	QELAEYVFNTHGCQSCHTMGHDGKLGFTDRGKERAKGFEGCISMLTAMTVIVQVPGDQRSARQREKVARFEEFGCTTCHKITPGKLDLTQVGAKLTHLHLGCVDVEKLVASQPDHNN
Ga0210407_102500182	3300020579	Soil	MVAEGKSQRELAQYVFNTHGCKSCHTMSQKAGRNGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEKQRSPQQRQKAARFAEFGCTTCHKIIPGKMGLTDIGAKLTHLHLGCVDVEKLVAAKP
Ga0210407_108680611	3300020579	Soil	MIAAHKSQQELAKYVFDTHGCKNCHTMGHDGKLGFTSKGRERAQGFEGCISMLTAMTVIVQVPDNQRSAKQRERARRFEEFGCTTCHKITPGKLDLTEVGAKLTHLHLGCVDVEKLVASQPDRHN
Ga0210403_100932972	3300020580	Soil	MVFERRTKVREYSWGLAAMVTILCASPAPDQQLDRMIAAGKSQGEVAKYVFNTHGCKNCHTMGASGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEKQRSPEQRQKSARFEDFGCTTCHKIVPGQMGLTDLGAKLRQLHVGCVDVEKLVATQH
Ga0210403_105954791	3300020580	Soil	ATLDRMIAAGKSPQELAQYVFDTHGCKSCHTVGRDGKLGYTERGKERAKGFEGCINMLTSMTVIVQLSEERRSDEQRQRAAKFEEFGCTACHKLTPGKLALTDIGAKLQHLHLGCVDVEKLTSTHAPQR
Ga0210399_108672811	3300020581	Soil	SAAQAQSSPQQSAAGLDRMIAAHKSQQELARYVLDTHGCTKCHTIGSKGKLGFTEVGKQRAQGFEGCISMLTAMTVIVQVPEDKRSAQQRQRAQRFEEFGCTTCHKLTPGKLDLTEVGAKLTHLHLGCVDVEKLVASQPGRNN
Ga0210395_112572811	3300020582	Soil	IAAGASSRELAQYVFDTHGCKNCHTVGQDGKLGFTAKGKERAQGFEGCIKMLTAMTVIVQLAADKRSPQQQQKAERFQEFGCTACHKLTPGKLALTEVGAKLAHLHLGCVDVEKFVADGSKR
Ga0210401_1000040129	3300020583	Soil	MRPLMIFIAAAVTLFAQNQKPSPSDAALDRMIAAGKSPQELAEYVFNTHGCQSCHTMGHDGKLGFTDRGKERAKGFEGCISMLTAMTVIVQVPGDQRSARQREKVARFEAFGCTTCHKITPGKLDLTQVGAKLTHLHLGCVDVEKLVASQPGHNN
Ga0210401_1000105312	3300020583	Soil	MVFERRTKVREYSWGLAAMVTILCASPAPDQQLDRMIAAGKSQREVAKYVFNTHGCKNCHTMGASGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEKQRSPEQRQKSARFEDFGCTACHKIVPGKMGLTDLGAKLKQLHVGCVDVEKLVATQH
Ga0210401_107608611	3300020583	Soil	LSAIQPIKQKPPIRVMPASDLLVDNNFIDTAPAREVIMVFERRTKLQNHLWGLIAMATILSAAPAPDQQLDRMIAAGKSQQQLAKYVFNTHGCRNCHTMGGSGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDQKQRSPEQRQKAARFEDFGCTTCHKIIPGKMGLTDLGAKLTHLHLGCVDVEKLVATRR
Ga0210401_112096851	3300020583	Soil	RACEVIAPSDYRLAPDVMMVFLRRTNVRVCSFALAAMIAILEAAPASDQQLDRMIAAGKSQQQLAKYVFNTQGCKNCHTLAGSGKLGFTEKGKARAQGFEGCISMLTAMNLIAQVDQKQRTAEQRQKTARFEDFGCTTCHKIIPGKMGLTDIGTKLTRLHLGCVDLEKLVSTR
Ga0210400_108049301	3300021170	Soil	EPAGLAQYVFNTHGCKSCHTMSQKGGQSGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDQKQRSPEQRQKAARFEEFGCTTCHKIIPGKMGLTDIGAKLTHLHLGCVDVEKLVAAKP
Ga0210396_1000905910	3300021180	Soil	MVFERRTKVREYSWGLAAMVTISCASPAPDQQLDRMIAAGKSQREVAKYVFNTHGCKNCHTMGASGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEKQRSPEQRQKSARFEDFGCTACHKIVPGKMGLTDLGAKLKQLHVGCVDVEKLVATQH
Ga0210396_102210061	3300021180	Soil	MIAAGKSQQELAKYVFNTRGCRNCHTLAGSGKLEFTEKGKVRAKGFEGCISMLTAMNLIAQVDEKHRSVEQRQKISRFEDFGCTTCHKIIPGKMGLTDIGIKLTRLHLGCVDLEKLVSTKLGRVHSALV
Ga0210393_104754671	3300021401	Soil	MPRALLLLLSTTSLALMGQPNQNATLDRMVADGKSPRELAQYVFDKHGCKKCHTIGRDGKLGFTELGKQRATGFEGCIHLLTTMTVIVAVPEQKRSPQQREKVARFEEFGCTSCHRASPGKLTLTEVGAKLQHLHLGCVEVEKLTSTSTSQP
Ga0210397_108188132	3300021403	Soil	MVFERRTKLREYSWALAAMVTILCASPAPDQQLDRMIAAGKSQREVAKYVFNTHGCKNCHTMGASGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEKQRSPEQRQKSARFEDFGCTTCHKIVPGQMGLTDLGAKLRQLHVGCVDVEKLVATQH
Ga0210387_106422362	3300021405	Soil	VREYLWALAAMATILSAAPAPDQRLDWMIAAGKSQQELAKYVFNTHGCKNCHTMGGSGKLGFTEKGKERARGFEGCISMLTAMNLIAQVDQKQRSPEQRQKAARFEDFGCTTCHKIIPGKMGLTDLGAKLTHLHLGCVDVEKLVATRR
Ga0210386_116489911	3300021406	Soil	TVATLDRMIAAGASSRELAQYVFDTHGCKSCHTIGQDGKLGFTPKGKERAQGFEGCIRMLTAMTVIVQVPADKRSPQQREKAERFQEFGCTACHTLTPGKLGQTEVGAKLAHLHLGCVDVEKFVANGPQR
Ga0210386_117485461	3300021406	Soil	DHSGPESVTLDRMIAAGKSPQELAQYVFDTHGCKSCHTVGRDGKLGYTERGKERAKGFEGCINMLTSMTVIVQLSEERRSDEQRQRAAKFEEFGCTACHKLTPGKLALTDIGAKLQHLHLGCVDVEKLTSTHAPQR
Ga0210394_100024407	3300021420	Soil	MTRGLLFLLSTAALPLMGQQNHNATLDRMIADGKSPRELAQYVFDTHGCKKCHTIGRDGKLGFTDLGKQRATGFEGCIHLLTAMSEIVRVPDQKRSPQQREKVARFDEFGCTSCHKVSPGKLTLTEVGAKLQHLHLGCVEVEKLTSTSPSQP
Ga0210409_100250436	3300021559	Soil	FLIILPFVPLLASIAMVAQQGQNVRPDQTSAQATSAELDRMVAAGKSPAELAQYVFEAQGCKTCHTLGHDGKLGYTETGKLRATGFEGCINMLTAMTVIVQVSEEKRTPVQHQKAERFGEFGCTQCHKLTPGNMSLTELGSKLKHMNLGCVEVEKLASAK
Ga0210409_102601833	3300021559	Soil	ALLLVAVTFGGPATALGADKLDRMIAAGASSRELAQYVFDTHGCKNCHTVGQDGKLGFTAKGKERAQGFEGCIKMLTAMTVIVQVAADKRSPQQQQKAERFQEFGCTACHKLTPGKLALTEVGAKLAHLHLGCVDVEKFVADGSKR
Ga0210409_103370762	3300021559	Soil	MKCITIGLLVTTMAALAQPSQDAKLDRMIAAHKSQQELAKYVFDTHGCKNCHTMGHDGKLGFTSKGRERAQGFEGCISMLTAMTVIVQVPDSQRSAKQRERVRRFEEFGCTTCHKITPGKLDLTEVGAKLTHLHLGCVDVEKLVASQPDRHN
Ga0210409_104838351	3300021559	Soil	MRLLMIFIVAAAVTLFAQNQKPSPSDAALDRMVAAGKSPQELAEYVFNTHGCQSCHTMGHDGKLGFTDRGKERAKGFEGCISMLTAMTVIVQVPGDQRSARQREKVARFEEFGCTTCHKITPGKLDLTQVGAKLTHLHLGCVDVEKLVASQPEHNN
Ga0126371_126876251	3300021560	Tropical Forest Soil	AKYVFDTHGCKSCHTIGENGKLGYTEKGRERAKGFEGCINMLTAMTVIAQTPDDKRTSQQAQKALRFKEFGCTDCHLVTPGKLALTDVGAKLAHLHLGCVDVEKLTSSQSSHRRP
Ga0212123_1000125920	3300022557	Iron-Sulfur Acid Spring	MRVCLLALAAMAVIFQSAPAADQQLDRMITEGKSQRKLAQYVFNTHGCKNCHTMGASGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDDQQRSPEQRQKAGRFEEFGCTTCHKIIPGKMGLTDLGAKLTHLHLGCVDVEKFVATKH
Ga0242665_100150782	3300022724	Soil	MRRFLIILPFVPLLASIAMVAQQGQNVRPDQTSAQATSAELDRMVAAGKSPAELAQYVFEAQGCKTCHTLGHDGKLGYTETGKLRATGFEGCINMLTAMTVIVQVSEEKRTPVQHQKAERFGEFGCTQCHKLTPGNMSLTELGSKLKHMNLGCVEVEKLASAK
Ga0207699_107974032	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LTLAALVVTLCGSSALAQQELDRMVAEGKSQRELARYVFNTHGCKSCHSMGQSGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEKQRSPQQRQKAARFEEFGCTTCHKIIPGKMGLTDIGAKLTHLHLGCVDVEKLVAAKP
Ga0207661_106960711	3300025944	Corn Rhizosphere	RPQEDPAQRPSDRLNQMIASGKDQQQLAQYVFDTHGCKGCHTLGHDGKLGYTEKGKQRAAGFEGCINMLTAMTVIVQVPEDKRSSQQRQRAARFEEFGCTACHRLSPGKLSLTEVGAKLKQLHLGCVDIEKLTSQRGPQN
Ga0207648_119804241	3300026089	Miscanthus Rhizosphere	MADHKSQQEMAQYVFDTHGCKACHTVGQNGKLGFTAKGKLTAGGFEGCIRLLTDMTVIAQTPERQRSAQQQKKASRFQEFGCTFCHQITPGRLSLTDVGTKLSHLHLGCVDVQKAVAVSAPR
Ga0209009_10273892	3300027667	Forest Soil	MVFLRRTNVRVCSFALAAIVVGLRGSPAPAQQLDRMIAAGKSQEELAKYVFSTQGCKNCHSMGASGKLGLTEKGKERAKGFEGCISMLTAMNLIAQVDDQQRSREQRQKAARFEEFGCTTCHKIIPGKMGLTDLGAKLTHLHLGCVDVEKLVATKH
Ga0209580_100572081	3300027842	Surface Soil	LRPLIILLIATAGIAVLAPNQNEKASAPDAALDRMIAAGKNPQELAQYVFDTHGCKSCHTVGHDGKLGFTEKGQERAKGFEGCISMLAAMTVIVQVADDKRTPQQRDKAKRFAEFGCTACHKLAPGALGLTQVGAKLQHLHLGCVNVERLVSSQASPQR
Ga0209580_101058311	3300027842	Surface Soil	LRLYVLMLAAMGMILPAATAQDKQLDRMIAAGKSQKELAQYLFNTHGCKSCHTMGQNGKLGFTEKGKERAKAFEGCISMLTAMNLIAQVDEKQQSPQQRQKAARFEEFGCTACHKIIPGKMGLTDIGAKLTHLHLGCVDVEKLVSTR
Ga0209166_103801031	3300027857	Surface Soil	MKLSLLTIFLGIVAAVAQQSQTGAQLDRMIKSGASPKELAKYVFDTHGCQSCHTIGHDGKLGFTAKGVERRKGSEGCIRMLTAMTVIVQVPEGERTDQQRQKAHRFEEFGCTQCHQLTPGKLSLSEVGAKLAHLHLGCVDVEKLTSSGSKQ
Ga0209067_102623522	3300027898	Watersheds	TAAVAQPSASAQQTAATMDRMIAAHKSQQELAQYVFDTHGCKRCHTIGHDGKLGYTEKGKQRAEGFEGCINMLTAMTVIVQTPEGKRSTQQRQKAARFEEFGCTECHKLAPGKLSLTEVGAKLQHLHLGCVDIEKLTSGSPAPQR
Ga0209168_100476132	3300027986	Surface Soil	MPRVFCVLISTASLTLLAQQEASRTQDPSFDRMVAAGKSSQELAKYVFDTHGCKSCHTIGKEGKLGYTEKGKERAKGFEGCINMLTAMTVIVQTPEEKRSSQQREKAQRFEEFGCTACHKLTPGKLGLTEVGAKLQHLHLGCVDVEKLTSSETASKR
Ga0308309_104802881	3300028906	Soil	PDQQLDRMITAGKSQQELAKYVFNTRGCKNCHTMGGSGKLGFTEKGKERAKGFEGCISMLTAMKLIAQVDDKQRSPEQRQKAARFEDFGCTTCHKIIPGKMGLTDLGAKLTHLHLGCVDVEKLVATRR
Ga0222749_106217101	3300029636	Soil	LGADKLDRMIAAGASSRELAQYVFDTHGCKNCHTMGQNAKLGFTERGRERAKGFEGCISMLTAMNLIAQVPDDKRSLTQRQKAARFEEFGCTTCHKITPGKLGLTEIGTKLTHLHLGCVDVEKLVASKPAAQH
Ga0170823_143259941	3300031128	Forest Soil	ATLDRMAAAGKSNQELAQYVFNTHGCRNCHTIGHDGKLGFTAKGEERRNASEGCIRMLTAMTVIVQVPEVERTDQQRQKAQRFEEFGCTQCHQLTPGKLSLSEVGAKLAHLHLGCVDVEKLTSSGSKQ
Ga0170824_1028294322	3300031231	Forest Soil	MRLSLLIIFLSIAAAVAQQAQTGTQLDRMIKSGASPKELAKYVFDTHGCQSCHTIGHDGKLGFTAKGEERRKGSEGCIRMLTAMTVIVQVPEDERTDQQRQKARRFEEFGCTQCHQLTPGKLSLTEVGAKLAHLHLGCVDVEKLTSSGSKQ
Ga0170824_1171023823	3300031231	Forest Soil	MTRGLLFLLIATSVMLMGQQSQNATLDRMIADGKSPRELAQYVFDTHGCKKCHTIGRDGKLGFSELGKQRAASFEGCIHLLTAVSEITRVAEQKRSPQQREKIVRFEEFGCTSCHKVSPGKVTLTEAGAKLKHLHLGCVEVEKLASTSPSQP
Ga0170824_1238389891	3300031231	Forest Soil	MWTYSLALAALVVTFCGASALAQQELDRMVAQGKSQRELARYVFNTHGCKNCHSMGQSGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEKQRSPQQRQKAERFEEFGCTTCHKIIPGKMGLTDIGAKLTHLHLGCVDVEKLVAAKP
Ga0170824_1260666902	3300031231	Forest Soil	MVAEHKGQQELAQYVFSTHGCQKCHTAGVDGKLGFTDRGKQAAGNFEGCIRMLTDMSVIAQMSESRRSEAQRQKAARFEEFGCTFCHKISTGKLELTEVGTKLNHLHLGCVVVEKQVASRKRK
Ga0170820_129416712	3300031446	Forest Soil	MTRGLLFLLIATSVMLMGQQSQNATLDRMIADGKSPRELAQYVFDTHGCKKCHNIGRDGKLGFSELGKQRAASFEGCIHLLTAVSEITRVAEQKRSPQQREKIARFDEFGCTSCHKVSPGKVTLTEAGAKLKHLHLGCVEVEKLASTSPSQP
Ga0170819_178389591	3300031469	Forest Soil	MTRGLLFLLIATSVMLMGQQSQNATLDRMIADGKSPRELAQYVFDTHGCKKCHTIGRDGKLGFSELGKQRAASFEGCIHLLTAVSEITRVAEQKRSPQQREKIARFDEFGCTSCHKVSPGKVTLTEAGAKLKHLHLGCVEVEKLASTSPSQP
Ga0170818_1073958141	3300031474	Forest Soil	AAAVAQQAQTGTQLDRMIKSGASPKELAKYVFDTHGCQSCHTIGHDGKLGFTAKGEERRKGSEGCIRMLTAMTVIVQVPEDERTDQQRQKARRFEEFGCTQCHQLTPGKLSLTEVGAKLAHLHLGCVDVEKLTSSGSKQ
Ga0318561_107145361	3300031679	Soil	AAFDRMAAAGKSSQELARYVFDTHGCKTCHTIGHDGKLGYTEKGKQRADGFEGCINMLAAMAVIVQTPEEKRSPQQRDRAARFAEFGCTECHRVSPGKMDLTAVGGKLKRLHLGCVDVEKLTSSQPAGQQASAGQDNP
Ga0307475_115479841	3300031754	Hardwood Forest Soil	RMVAAGKSPRELGQYVFDTHGCNSCHTVGENGKLGFTAKGKQLTQGFEGCIRTLTAMNLIAQVPDNQRSPDQRKTAARFNEFGCTLCHKIIPGKMGLTDLGTKLTSLHLGCVDVEKLVASKPAATR
Ga0307478_101977383	3300031823	Hardwood Forest Soil	MAQQAQTGAELDRMIKSGASPKELAKYVFDTHGCQSCHTIGHDGKLGFTAKGVERRQGSEGCIRMLTAMTVIVQVPEGERTDQQRQKAQRFEEFGCTQCHQLTPGKLTLSDVGAKLAHLHLGCVDVEKLTSSGSKRASE
Ga0307478_115058011	3300031823	Hardwood Forest Soil	MVLTLCASSALAQQELDRMVAEGKSQRELAQYVFNTHGCKSCHTMSQKGGQSGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEKQRSPQQRQKAARFEEFGCTTCHKIIPGKMGLTDIGMKLTHL
Ga0307479_103564992	3300031962	Hardwood Forest Soil	MVLTLCASSALAQQELDRMVAEGKSQRELAQYVFNTHGCKSCHTMSQKGGQSGKLGFTEKGKERAKGFEGCISMLTAMNLIAQVDEKQRSPQQRQKAARFEEFGCATCHKIIPGKMGLTDIGMKLTHLHLGCVDVEKLVAAKP
Ga0307479_111224941	3300031962	Hardwood Forest Soil	QPSPRQTAAALDRMIAAHKSQQELAQYVFDTHGCKKCHTMGSNGKLGFTEVGKQRAQGFEGCISMLTAMTVIVQVPEDKRSAQQRQKAQRFEEFGCTSCHKLTPGKLDLTEVGAKLTHLHLGCVDVEKVVASQPGRNNGDQ
Ga0311301_128280571	3300032160	Peatlands Soil	FDTQGCKNCHTLGHDGKLGYTELGKQRSQGFEGCIDMLTAMTVVVQVLPEKRSQQQREKAQRFEEFGCTACHKLAPGKLALTEIGTRLAALHLGCVDLEKLTSSSGASQN
Ga0306920_1012021052	3300032261	Soil	MRQFLVVVVLGLALQAATAQESKPPASAADAGLDRMVAADKSPLDLASYVFDSHGCKSCHTLGHDGKLGYTERGKQRAASFEGCIRMLTAMTVIVQTPEEKRSPQQRDKVARFAEFGCTACHQIAPGRLGLTEVGAKLAHLHLGCVDVEKLVAGGHSAK
Ga0306920_1016486471	3300032261	Soil	QELARYVFDTHGCKSCHTLGQNGQLGFTDRGNQTAKGFEGCISMLTAMNVIAQVAPDQRTQQQRKTATRFEEFGCTTCHQIVPGKMGLTELGAKLAHLHLGCVDVEKQLASQTAPKR
Ga0335081_111462121	3300032892	Soil	MKYLLLAALASVTSQAILAQSGNSAASDPKLDRMVAEGKSPQELAKYVFDTHGCQSCHTIGHDGKLGYTARGRERAQNFEGCIKMLTAMTVIVQVPEEKRSSEQRQKAARFQEFGCTSCHTLAPGKLGLTEVGAKLQHLHLGCVDIEKLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080429

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences