Metagenome / Metatranscriptome Family F080445

Basic Information
Family ID	F080445
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	83 residues
Representative Sequence	EQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRESGLVATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ
Number of Associated Samples	86
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	53.04 %
% of genes near scaffold ends (potentially truncated)	38.26 %
% of genes from short scaffolds (< 2000 bps)	93.91 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Most Common Taxonomy
Group	Unclassified (81.739 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.304 % of family members)
Environment Ontology (ENVO)	Unclassified (44.348 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.130 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.04% β-sheet: 35.58% Coil/Unstructured: 40.38%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.107.1.1: Ran-binding protein mog1p	d1jhsa_	1jhs	0.67134
d.296.1.1: YktB-like	d2a8ea1	2a8e	0.61682
b.29.1.0: automated matches	d5jowa2	5jow	0.61095
c.65.1.1: Formyltransferase	d2bw0a2	2bw0	0.6049
c.65.1.1: Formyltransferase	d4ew1a1	4ew1	0.60191

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF11295	DUF3096	9.57
PF02082	Rrf2	2.61
PF02577	BFN_dom	2.61
PF00216	Bac_DNA_binding	2.61
PF07040	DUF1326	2.61
PF00072	Response_reg	0.87
PF00122	E1-E2_ATPase	0.87
PF03364	Polyketide_cyc	0.87
PF08281	Sigma70_r4_2	0.87
PF07228	SpoIIE	0.87
PF04542	Sigma70_r2	0.87
PF02371	Transposase_20	0.87
PF08327	AHSA1	0.87
PF07929	PRiA4_ORF3	0.87
PF05974	DUF892	0.87
PF01895	PhoU	0.87
PF01526	DDE_Tnp_Tn3	0.87
PF01726	LexA_DNA_bind	0.87
PF07690	MFS_1	0.87
PF13007	LZ_Tnp_IS66	0.87
PF07366	SnoaL	0.87
PF06262	Zincin_1	0.87
PF03734	YkuD	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	2.61
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	2.61
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	2.61
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	2.61
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	2.61
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	2.61
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	2.61
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	2.61
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	2.61
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	2.61
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	2.61
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.87
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.87
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.87
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.87
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.87
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	0.87
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.87
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.87
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.87
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.87
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.87
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.74 %
All Organisms	root	All Organisms	18.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.74 %
cellular organisms	root	All Organisms → cellular organisms	18.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	18.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.74 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.74 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.74 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.87 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig35752	Not Available	1001	Open in IMG/M
2170459009\|GA8DASG01CBGNR	Not Available	500	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101249373	Not Available	884	Open in IMG/M
3300002245\|JGIcombinedJ26739_100230073	Not Available	1745	Open in IMG/M
3300002245\|JGIcombinedJ26739_100608062	Not Available	970	Open in IMG/M
3300002245\|JGIcombinedJ26739_101570808	Not Available	554	Open in IMG/M
3300002245\|JGIcombinedJ26739_101688120	Not Available	532	Open in IMG/M
3300002245\|JGIcombinedJ26739_101762670	Not Available	519	Open in IMG/M
3300003218\|JGI26339J46600_10123272	Not Available	619	Open in IMG/M
3300003219\|JGI26341J46601_10074103	Not Available	1025	Open in IMG/M
3300003368\|JGI26340J50214_10154768	Not Available	573	Open in IMG/M
3300003505\|JGIcombinedJ51221_10043312	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300003505\|JGIcombinedJ51221_10279960	Not Available	678	Open in IMG/M
3300004080\|Ga0062385_10391477	Not Available	828	Open in IMG/M
3300004092\|Ga0062389_102974367	Not Available	634	Open in IMG/M
3300004092\|Ga0062389_103706964	Not Available	573	Open in IMG/M
3300004152\|Ga0062386_100440322	Not Available	1053	Open in IMG/M
3300004152\|Ga0062386_100557223	Not Available	934	Open in IMG/M
3300004152\|Ga0062386_101330436	Not Available	598	Open in IMG/M
3300005437\|Ga0070710_10145166	Not Available	1459	Open in IMG/M
3300005437\|Ga0070710_10282347	Not Available	1078	Open in IMG/M
3300005439\|Ga0070711_100971376	Not Available	728	Open in IMG/M
3300005602\|Ga0070762_10576626	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005602\|Ga0070762_10581326	Not Available	742	Open in IMG/M
3300005602\|Ga0070762_10959410	Not Available	585	Open in IMG/M
3300005610\|Ga0070763_10950369	Not Available	513	Open in IMG/M
3300005921\|Ga0070766_10586329	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300006102\|Ga0075015_100233258	Not Available	991	Open in IMG/M
3300006172\|Ga0075018_10411490	Not Available	690	Open in IMG/M
3300006173\|Ga0070716_100528636	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300006173\|Ga0070716_100605741	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300006176\|Ga0070765_100072017	Not Available	2904	Open in IMG/M
3300006176\|Ga0070765_100219840	Not Available	1731	Open in IMG/M
3300006176\|Ga0070765_100513337	Not Available	1127	Open in IMG/M
3300006893\|Ga0073928_10369243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1057	Open in IMG/M
3300009174\|Ga0105241_11619198	Not Available	627	Open in IMG/M
3300010154\|Ga0127503_10734362	Not Available	574	Open in IMG/M
3300010341\|Ga0074045_10255895	Not Available	1157	Open in IMG/M
3300010343\|Ga0074044_10632425	Not Available	698	Open in IMG/M
3300010373\|Ga0134128_12696538	Not Available	548	Open in IMG/M
3300010379\|Ga0136449_100418256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	2368	Open in IMG/M
3300010379\|Ga0136449_103230397	Not Available	629	Open in IMG/M
3300010857\|Ga0126354_1000279	Not Available	905	Open in IMG/M
3300010865\|Ga0126346_1396947	Not Available	599	Open in IMG/M
3300012189\|Ga0137388_11267682	Not Available	675	Open in IMG/M
3300012202\|Ga0137363_10936788	Not Available	735	Open in IMG/M
3300012202\|Ga0137363_11726727	Not Available	518	Open in IMG/M
3300012361\|Ga0137360_10343806	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300012957\|Ga0164303_11376225	Not Available	526	Open in IMG/M
3300012958\|Ga0164299_10104358	Not Available	1480	Open in IMG/M
3300012961\|Ga0164302_10811919	Not Available	707	Open in IMG/M
3300012987\|Ga0164307_11528209	Not Available	564	Open in IMG/M
3300012989\|Ga0164305_10357179	Not Available	1103	Open in IMG/M
3300014054\|Ga0120135_1065186	Not Available	592	Open in IMG/M
3300015372\|Ga0132256_101664459	Not Available	748	Open in IMG/M
3300016341\|Ga0182035_10924757	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300020579\|Ga0210407_10424911	Not Available	1040	Open in IMG/M
3300020579\|Ga0210407_10474187	Not Available	978	Open in IMG/M
3300020579\|Ga0210407_10486196	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300020580\|Ga0210403_10399356	Not Available	1123	Open in IMG/M
3300020580\|Ga0210403_10418840	Not Available	1093	Open in IMG/M
3300020581\|Ga0210399_11018587	Not Available	666	Open in IMG/M
3300020582\|Ga0210395_11268130	Not Available	540	Open in IMG/M
3300020583\|Ga0210401_11066948	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300021170\|Ga0210400_10341549	Not Available	1232	Open in IMG/M
3300021170\|Ga0210400_10479146	Not Available	1027	Open in IMG/M
3300021171\|Ga0210405_10867888	Not Available	688	Open in IMG/M
3300021178\|Ga0210408_10396384	Not Available	1100	Open in IMG/M
3300021178\|Ga0210408_10604685	Not Available	868	Open in IMG/M
3300021178\|Ga0210408_11011343	Not Available	643	Open in IMG/M
3300021180\|Ga0210396_10761368	Not Available	833	Open in IMG/M
3300021180\|Ga0210396_11405463	Not Available	577	Open in IMG/M
3300021181\|Ga0210388_10355659	Not Available	1288	Open in IMG/M
3300021401\|Ga0210393_10957154	Not Available	694	Open in IMG/M
3300021401\|Ga0210393_11457745	Not Available	546	Open in IMG/M
3300021405\|Ga0210387_11793077	Not Available	517	Open in IMG/M
3300021406\|Ga0210386_11282733	Not Available	617	Open in IMG/M
3300021407\|Ga0210383_10853567	Not Available	777	Open in IMG/M
3300021420\|Ga0210394_10065539	Not Available	3151	Open in IMG/M
3300021420\|Ga0210394_10797224	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300021420\|Ga0210394_11439053	Not Available	585	Open in IMG/M
3300021432\|Ga0210384_10433830	Not Available	1184	Open in IMG/M
3300021474\|Ga0210390_10565717	Not Available	955	Open in IMG/M
3300021475\|Ga0210392_10169191	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300021478\|Ga0210402_12007562	Not Available	504	Open in IMG/M
3300021479\|Ga0210410_11046503	Not Available	706	Open in IMG/M
3300021559\|Ga0210409_11609226	Not Available	526	Open in IMG/M
3300022507\|Ga0222729_1002875	Not Available	1458	Open in IMG/M
3300022527\|Ga0242664_1007715	Not Available	1429	Open in IMG/M
3300022557\|Ga0212123_10178044	Not Available	1604	Open in IMG/M
3300025320\|Ga0209171_10020716	All Organisms → cellular organisms → Bacteria → Proteobacteria	5219	Open in IMG/M
3300025939\|Ga0207665_10148183	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300026687\|Ga0208212_100034	All Organisms → cellular organisms → Bacteria	1986	Open in IMG/M
3300026721\|Ga0208841_103719	Not Available	567	Open in IMG/M
3300027069\|Ga0208859_1024608	Not Available	690	Open in IMG/M
3300027109\|Ga0208603_1007585	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300027172\|Ga0208098_1003496	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300027174\|Ga0207948_1045595	Not Available	530	Open in IMG/M
3300027603\|Ga0209331_1040848	Not Available	1182	Open in IMG/M
3300027603\|Ga0209331_1081890	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	800	Open in IMG/M
3300027684\|Ga0209626_1056153	Not Available	989	Open in IMG/M
3300027698\|Ga0209446_1006256	All Organisms → cellular organisms → Bacteria	2914	Open in IMG/M
3300027812\|Ga0209656_10049071	Not Available	2395	Open in IMG/M
3300027812\|Ga0209656_10058995	All Organisms → cellular organisms → Bacteria	2132	Open in IMG/M
3300027824\|Ga0209040_10339357	Not Available	717	Open in IMG/M
3300027889\|Ga0209380_10086816	Not Available	1799	Open in IMG/M
3300028047\|Ga0209526_10158643	Not Available	1582	Open in IMG/M
3300028047\|Ga0209526_10479601	Not Available	814	Open in IMG/M
3300030007\|Ga0311338_11838277	Not Available	544	Open in IMG/M
3300030740\|Ga0265460_10980118	Not Available	776	Open in IMG/M
3300030998\|Ga0073996_10096614	Not Available	1246	Open in IMG/M
3300031047\|Ga0073995_11686772	Not Available	746	Open in IMG/M
3300031754\|Ga0307475_11479230	Not Available	522	Open in IMG/M
3300032160\|Ga0311301_11587857	Not Available	798	Open in IMG/M
3300032205\|Ga0307472_101377288	Not Available	683	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.39%
Host-Associated	Host-Associated	1.74%
Engineered	Engineered	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.87%
Aquatic	Environmental → Aquatic	16.52%
Plants	Host-Associated → Plants	1.74%
Modeled	Engineered → Modeled	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Freshwater	Environmental → Aquatic → Freshwater	12.17%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.61%
Sediment	Environmental → Aquatic → Sediment	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.74%
Peat	Environmental → Terrestrial → Peat	0.87%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.57%
Loam	Environmental → Terrestrial → Soil → Loam	28.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.30%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.22%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.91%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	11.30%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.48%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.74%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.74%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010857	Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026687	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN413 (SPAdes)	Environmental	Open in IMG/M
3300026721	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN395 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0752.00002640	2166559005	Simulated	LERVTVKTVKIDDEVIALDVVRRGEKRFVFEIMRDNPNRLVATSDEHKTAKRAAKAGKPIWKRTVEAALQEKLDQ
F47_12211870	2170459009	Grass Soil	NLLSLAHTHCDGSLSFLRRDERQINSKTATEQTTERVTVRRVKIDDEVISLDVVRRAEKRFVFEIRRDNGNRMVASSDEHKKAKRAARAGKPIWKRTVKAVLQEKLDQ
INPhiseqgaiiFebDRAFT_1012493732	3300000364	Soil	VTVKSVKIDDEVFPFDVVKRDEKRFVFEIMRNNGNRMVASSDEHKKAKRAAKAGKPIWKRTVKAALQEKLDQ*
JGIcombinedJ26739_1002300734	3300002245	Forest Soil	MEPDEEQINLKTANEQTPERVTVKRVKIDDEAIALYVVRRAEKSFVFEIMRDNGLVATSDEYKSAKGAAKAGKPIWKRTVKSALKAKLDQ*
JGIcombinedJ26739_1006080622	3300002245	Forest Soil	VRRVKIDDEAIALDVVRRAEKRFVFEIMRNSSLVATSDEHKTAKGAARAGKPIWKRTVKSALKATLDQ*
JGIcombinedJ26739_1015708081	3300002245	Forest Soil	LVAGNTSLLENVGEKGTNINMETTDEQTPERITVNSVKINDEVLALDVVKRGEKRFVFEILRDNGNRIVASSDEHKKAKRAARAGKSIWKRTVKAALKEKLDQ*
JGIcombinedJ26739_1016881201	3300002245	Forest Soil	VKRVKIDDEAIVLDVVRRPEKRFVFEIMRDSILVATSDEHKTAKGAARAGKPIWKRTAKLALKEKLDQ*
JGIcombinedJ26739_1017626701	3300002245	Forest Soil	VKRVKIDDEAIALDVVRRAEKRFVFEIMRGNDLIATSDEHKTAKGAAXAGKPIWKRTVKSAIKAKLDQ*
JGI26339J46600_101232721	3300003218	Bog Forest Soil	LQTINEQTPERVTVNKVKIDEEVIALDVVRRAEKRFVFEIIRDNRNRLVASSDEHKTAKSAAKAGKPIWKRTVKAALKERLNQ*
JGI26341J46601_100741032	3300003219	Bog Forest Soil	LKTANEQTPERVRVKSVKIDDEVIALDVVRRGEKRFVFEIMRDNGNRMVASSDEHNKAKRAARAGKRIWKRTVKSALKAKLDQ*
JGI26340J50214_101547681	3300003368	Bog Forest Soil	LQTINEQTSERVTVNKVKIDDEAIALDVVRRAEKRFVFEIIRDNRNRLVASSDEHKTAKSAARAGKPIWKRTVKAALKERLNQ*
JGIcombinedJ51221_100433124	3300003505	Forest Soil	VKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNSMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ*
JGIcombinedJ51221_102799602	3300003505	Forest Soil	VKIDDEVIALDVVRRAEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDR*
Ga0062385_103914771	3300004080	Bog Forest Soil	LQTINEQTPERVTVNKVKIDEEVIALDVVRRAEKRFVFEIIRDNRNRLVASSDEHKTAKGAAKAGKPIWKRTVKAALKERLNQ*
Ga0062389_1029743671	3300004092	Bog Forest Soil	METNSQQTLERVTVKSIKIDDEVFALDVVKRGEKRFVFEIMRSDGNRMVACSDEHKKAKRAARAGKSIWKRTVKAALKEKLDQ*
Ga0062389_1037069641	3300004092	Bog Forest Soil	MEPDERQVNFKTANEQTPDRVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRESGLVATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ*
Ga0062386_1004403223	3300004152	Bog Forest Soil	MASEQTLERVTVKTVKIDDEAITLDVVRRGEGRFVFEIMRDNGNRMVASSDEHKKAKRAAKAGKSIWKRTVKTAL
Ga0062386_1005572232	3300004152	Bog Forest Soil	LETTNEQPPERVTVHRVKIDDEVIALDIVKRGEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKSIWKRTVKAALKEKLDQ*
Ga0062386_1013304361	3300004152	Bog Forest Soil	MSSEQTLERVTVRTVKIDDEAITLDVVTRGEKRFVFEIMRENGNRMVASSDEYKKAKRAAKAGKSIWKRTVKTALEERLDR*
Ga0070710_101451662	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	METNNEETPERVTVKSVKIDDEVFALDVVKRGEKRFVFEVMRSDGNRMVASSDEHKKAKRAARAGKSIWKRTIKAALKEKLDQ*
Ga0070710_102823473	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VTVKRVRIDDEAIALDVVRRAEKRFVFEIVRDNALIATSDEHKTAKGAARAGKPICKRMVKSALKAKLDQ*
Ga0070711_1009713761	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	METTNEQTAERITVKSVKIDDEVFALDVVKRGEKRFVFEVMRSDGNRMVASSDEHKKAKRAARAGKSIWKRTVKAALKEKLDQ*
Ga0070762_105766262	3300005602	Soil	MEPDEEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ*
Ga0070762_105813261	3300005602	Soil	LKWCRSAAINNGYKTRMEPDEAQIILKTAHEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEILRESGLVATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDR*
Ga0070762_109594101	3300005602	Soil	PERVTVKRVKIDDEVIALDVVRRAEKSFVFEIMRDNGLSATRDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ*
Ga0070763_109503691	3300005610	Soil	EEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEQRFVFEIIRDNRLVATSDERKTAKGAARAGKPIWKRTVKSALKEKLDQ*
Ga0070766_105863293	3300005921	Soil	MEPDEEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKRIWKRTVKAAL
Ga0075015_1002332582	3300006102	Watersheds	MMTSLIVEDMTKGKKNLQTINEQIPERVTVNKVKIDDEVIALDVVRRAEKRFVFEIIRDNRNRLVASSDEHKTAKSAARAGKPIWKRTVKAALKERLNQ*
Ga0075018_104114902	3300006172	Watersheds	MEPDEEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRHAEKRFVFEIMRESGLVATSDEHKTAKGAARAGKPIWRRTVKSALKAKLVQ*
Ga0070716_1005286362	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LQTTNEQIPERVTVKTVKIDDEVIALDVIRRAEKEFVFEITRDNSNRLVATSDEHKTAKSAARAGKPIWKRTARAALKEKLDQ*
Ga0070716_1006057411	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	NEQTAERITVKSVEIDDEVFALDVIKRGEKRFVFEIMRNNGNRMVASSDEHKKAKRAARAGKSIWKRTVKAALKEKLDQ*
Ga0070765_1000720171	3300006176	Soil	MEPNEQINLKTANEQAPERVTVKRVKIDDEVIALDVVRRAEKSFVFEIMRDNGLSATRDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ*
Ga0070765_1002198402	3300006176	Soil	MEPDERQVNFKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRESGLVATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ*
Ga0070765_1005133371	3300006176	Soil	GGFKNFIVGASQGSKTRMEPDEEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ*
Ga0073928_103692431	3300006893	Iron-Sulfur Acid Spring	TVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNSMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ*
Ga0105241_116191981	3300009174	Corn Rhizosphere	VTVKMVKIDDEVIALDVVRRPEKRFVFEIMRDSTLVATSDEHKTAKGAARAGKPIWKRTAKLALKEKLNQ*
Ga0127503_107343622	3300010154	Soil	METNNEQTPERVTVKSVKIDDEVFALDVVKRGEKRFVFEIMRNNGNRMVASSDEYKKAKRAARAGKSIWKQTVKAALKEKLDQ*
Ga0074045_102558951	3300010341	Bog Forest Soil	LQTINEQTPERVTVNKVKIDDEVIALDVVRRAEKRFVFEIIRDNRNRLVASSDEHKTAKSAAKAGKPIWKRTVKAALKERLNQ*
Ga0074044_106324251	3300010343	Bog Forest Soil	LQTINEQIPERVTVNKVKIDDEVIALDVVRRAEKRFVFEIIRDNPNRLVASSDEHKTAKSAARAGKPIWKRTVKAALKERLNQ*
Ga0134128_126965381	3300010373	Terrestrial Soil	LPNEQRANRSVTVKRVKIDDESIALDVVRRAENRFVFEIVRDSTLVAASDEHKSAKGAARAGKPVWKRTVKSALKAKLDQ*
Ga0136449_1004182561	3300010379	Peatlands Soil	LQTINEQIPERVTVNKVKIDDEVIALDVVRRAEKRFVFEIIRDNRNRLVASSDEHKTAKRAARAGKPIWKRTVKAALKERLNQ*
Ga0136449_1032303971	3300010379	Peatlands Soil	ERQKNLQTINEQIPERVTVNKIKIDDEVIALDVVRRAEKRFVFEIIRDNRDRLVASSDEHKTAKSAARAGKPIWKRTVKAALKERLNQ*
Ga0126354_10002791	3300010857	Boreal Forest Soil	QTERVTVKRVKIDDEAIVLDVVRRPEKRFVFEIMRDSILVATSDEHKTAKGAARAGKPIWKRTAKLALKEKLNQ*
Ga0126346_13969471	3300010865	Boreal Forest Soil	ERVTVKRVKIDDEAIVLDVVRRPEKRFVFEIMRDSILVATSDEHKTAKGAARAGKPIWKRTAKLALKEKLDQ*
Ga0137388_112676821	3300012189	Vadose Zone Soil	LKTTNGQTLERVTVNRVKVDSEIIALDVVRRGEKIFVFEIMRDNGNRMVASSDEHKKAKRAARAGKPIWKRTVKAE
Ga0137363_109367881	3300012202	Vadose Zone Soil	VNRVKIDEKDIALDVVRRAENSFVFEIRRGNDLVACSDEHKTAKGASKAGKPVWKRTAKLALKEKLDQ*
Ga0137363_117267271	3300012202	Vadose Zone Soil	FGTANEHTERVTVKRVKIDDEAIALEVVRRAEKRFVFEIMRDSSLVATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ*
Ga0137360_103438062	3300012361	Vadose Zone Soil	METNNEPTPQRVTLKSVKIDDEVFALGVVKRGEKRFVFEIMRDGNRMVASSDEHKKAKRAARAGKSIWKRTVKAALKEKLDQ*
Ga0164303_113762251	3300012957	Soil	RFKNFIVGASQGSKTRMEPDEEQINLKTANEQTPERVRVKSVKIDDEVIALDVVRRGEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKSIWKRTVKAALKEKLDQ*
Ga0164299_101043582	3300012958	Soil	MASEQTLERVTVKRVKIEDETITLDVVRRGEGRFVFEIMRDNGNRMVASSDEHKTAKRAAKAGKSIWKRTVKAALQERLDQ*
Ga0164302_108119192	3300012961	Soil	VKIDDEVIVLDVVRRAEKRFVFEIMRDNRLAASSDEHKTAKGAAKAGKPIWKRTAKFVLKEKLDQLA*
Ga0164307_115282092	3300012987	Soil	LKKGEKINMGTNNEQTPERVRVKSVKIDDEVFALDVVKRGEKRFVFEIMRSNGNRMVGSSDEYKKAKRAARAGKSIWKRTVKAALKEKLDQ*
Ga0164305_103571792	3300012989	Soil	MASEQTLERVTVKRVKIEDETITLDVVRRGEGRFVFEIMRDNGNRMVASSDEHKKAKRAAKAGKSIWKRTVKAALQERLDQ*
Ga0120135_10651862	3300014054	Permafrost	PERVTVKRVKIDDEAIVLDVVRRPEKRFVFEIMRDSILVATSDEHKTAKGAARAGKPIWKRTAKLALKEKLNQ*
Ga0132256_1016644592	3300015372	Arabidopsis Rhizosphere	MSKTTNEQTERVTVKMVKIDDEVIALDVVRRPEKRFVFEIMRDSILVATSDEHKTAKGAARAGKPIWKRTAKLALKEKLNQ*
Ga0182035_109247572	3300016341	Soil	LHIPNEQILERVTINSVKIDDEVIALDIVRRGEKRFVFEIMRENRNRLVATSDEHKTAKRAARAGKPIWKRTVKTALNERLDRKA
Ga0210407_104249113	3300020579	Soil	IKFGNDQPPERVTVHRVKIDDEVIALDIVKRGEKRFVFEIMRYNGNRMVASSDEHKKARRAARAGKPVWKRTVKAALKEKLDQ
Ga0210407_104741871	3300020579	Soil	LKKGEKINMGTNNEQTPERVRVKSVKIDDEVFALDVVKRGEKRFVFEIMRSDGNRMVASSDEHKKAKRAARAGKSIWKRTVKAALKEKLDQ
Ga0210407_104861961	3300020579	Soil	GGLRYFIVGASQGSKTRMEPDEEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNSMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ
Ga0210403_103993562	3300020580	Soil	MEPDEEQINLKTAKEQTPERVTVKRVKIDDEVIALNVVRRAEKRFVFEIMRESGLVATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ
Ga0210403_104188402	3300020580	Soil	LETKQPPERVTVHRVKIDDEVIALDIVKRGEKRFVFEIMRDNGNRMVASSDEHKKARRAARAGKPIWKRTVKAALKEKLDQ
Ga0210399_110185872	3300020581	Soil	GRGENQISFKTTDEQTPDRVTVKKVKIDDEVIALDVVRRAEKRFVFEIMRDDRSAASSDEHKTAKGAAKAGKPIWKRTAKSVLKQKLDQ
Ga0210395_112681302	3300020582	Soil	RMEPDGEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKSIWKRAVKAALKEKLDQ
Ga0210401_110669482	3300020583	Soil	MEPDEEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNSMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ
Ga0210400_103415492	3300021170	Soil	RVTVKKVKIDDEVIALDVVRRAEKRFVFEIMRDDRSAASSDEHKTAKGAAKAGKPIWKRTAKSVLKQKLDQ
Ga0210400_104791462	3300021170	Soil	VKRVKIDDEAIALDVVRRAEKRFVFEIIRNSSLVATSDEHKTAKGAARAGKPIWKRIVKSALKARLEA
Ga0210405_108678881	3300021171	Soil	EQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRESGLVATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ
Ga0210408_103963842	3300021178	Soil	TSEQTPDRVTVKKVKIDDEVIALGVVRRADERFVFEIMRDNRLAASSDEHKTAKGAARAAKPIWKRTAKSVLKEKLDQSG
Ga0210408_106046852	3300021178	Soil	ESPRGRFKNFIVGASQGSKTRMEPDEEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ
Ga0210408_110113432	3300021178	Soil	FETTNEQTERVTLKRVKIDDEAISLDVVRRAEKRFVFEIMHDSSLVATSDEHKTAKGAARAGKPIWKRTVKSALKATLDQ
Ga0210396_107613682	3300021180	Soil	LETTNEQPPERVTVHRVKIDDEVIALDIVKRGEKRFVFEIMRDNGNRMVASSDEHKKARRAARAGKPVWKRTVKAALKEKLDQ
Ga0210396_114054631	3300021180	Soil	RQLNFGTTNEQTERVTVKRVKIDDEAIALDVVRRAEKRFVFEIIRNSSLVATSDEHKTAKGAARAGKPIWKRIVKSALKARLEA
Ga0210388_103556594	3300021181	Soil	PSDNRDERQIKFGNDQPPERVTVHRVKIDDEVIALDIVKRGEKRFVFEIMRDNGNRMVASSDEHKKARRAARAGKPIWKRTVKAALKEKLDQ
Ga0210393_109571541	3300021401	Soil	LVKMETKINMETTNEQTAERITVKSVKIDDEVFALDVVKRGEKRFVFEIMRSNGNRMVGSSDEYKKAKRAARAGKSIWKRAVKAALKEKLDQ
Ga0210393_114577451	3300021401	Soil	LKKGEKINMGTNNEQTPERVRVKSVKIDDEVFALDVVKRGEKRFVFEVMRSDGNRMVASSDEHKKAKRAARAGKSIWKRTVKAALKEKLDQ
Ga0210387_117930771	3300021405	Soil	NFKTTSEQTPDRVTVKKVKIDDEVIALDVVRRAEERFVFEIMRDNRLAASSDEHKTAKGAAKAGKPIWKRTAKSVLKEKLDQ
Ga0210386_112827331	3300021406	Soil	TSEQTPDRVTVKKVKIDDEVIALDVVRRADERFVFEIMRDNRLAASSDEHKTAKGAARAAKPIWKRTAKSVLKEKLDQSG
Ga0210383_108535672	3300021407	Soil	QTPDRVTVKKVKIDDEVIALDVVRRAEKRFVFEIMRDNQLAASSDEHKTAKGAAKAGKPIWKRTAKSVLKEKLDQ
Ga0210394_100655397	3300021420	Soil	VRRVKIDDEAIALDVVRRAEKRFVFEIMRNSSLVATSDEHKTAKGAARAGKPIWKRTVKSALKATLDQ
Ga0210394_107972242	3300021420	Soil	MEPDEEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ
Ga0210394_114390532	3300021420	Soil	LETTNEQPPERVTVHRVKIDDEVIALDIVKRGEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKPVWKRTVKAALKEKLDQ
Ga0210384_104338303	3300021432	Soil	MEPNEQINLKTTNEQAPERVTVKRVKIDDEVIAHDVVRRAEKSFVFEIMRDNGLSATRDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ
Ga0210390_105657171	3300021474	Soil	METKINMETTNEQTAERITVKSVKIDDEVFALDVVKRGEKRFVFEIMRSNGNRMVGSSDEYKKAKRAARAGKSIWKRAVKAALKEKLDQ
Ga0210392_101691912	3300021475	Soil	LKKGEKINMGTNNEQTPERVRVKSVKIDDEVFALDVVKRGEKRFVFEIMRSDGNRMVASSDEHKKAKRAARAGKSIWKRTVKA
Ga0210402_120075621	3300021478	Soil	LGSVLKTARPKSQYELNMETSNEQTPERVTVKSVKIDDEVFALDVVKRGEKRFVFEIMRSNGNRLVASSDEHKKAKRAARAGKSVWKRTVKAALKEKLDQ
Ga0210410_110465032	3300021479	Soil	VKRVKIDDEAIALDVVRRAEKRFVFEIMRDSSLVATSDEHKTAKGAARAGKPIWKRTVISALKAKLDQ
Ga0210409_116092262	3300021559	Soil	VKRVKIDDEAIALEVVRRAEKRFVFEIIRNSSLVATSDEHKTAKGAARAGKPIWKRIVKSALKTKLDQ
Ga0222729_10028751	3300022507	Soil	KKVKIDDEVIALDVVRRAEKRFVFEIMRDDRSAASSDEHKTAKGAAKAGKPIWKRTAKSVLKQKLDQ
Ga0242664_10077152	3300022527	Soil	VTVKKVKIDDEVIALDVVRRAEKRFVFEIMRDDRSAASSDEHKTAKGAAKAGKPIWKRTAKSVLKQKLDQ
Ga0212123_101780442	3300022557	Iron-Sulfur Acid Spring	MEPNEQMNLKTANEQAPERVTVKRVKIDDEVIALDVVRRAEKSFVFEIMRDNGLSATRDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ
Ga0209171_100207161	3300025320	Iron-Sulfur Acid Spring	QGSKTRMESDEEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ
Ga0207665_101481833	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MASEQTLERVTVKRVKIEDETITLDVVRRGEGRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKSIWKRTVKAALKEKLDQ
Ga0208212_1000343	3300026687	Soil	METTNEQTPERVTVNSVKIDDEVLALDVVKRGEKRFVFEITRDNGNRMVASSDEHKKAKRAARAGKPIWKRTVKAALKEKLDQ
Ga0208841_1037191	3300026721	Soil	VEHVGEKGTKINMETTNEQTPERVTVNSVKIDDEVLALDVVKRGEKRFVFEITRDNGNRMVASSDEHKKAKRAARAGKPIWKRTVKAALKEKLDQ
Ga0208859_10246082	3300027069	Forest Soil	MEPNEQINLKTANEQAPERVTVKRVKIDDEVIALDVVRRAEKSFVFEIMRDNGLSATRDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ
Ga0208603_10075852	3300027109	Forest Soil	MEPDGEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNRMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ
Ga0208098_10034962	3300027172	Forest Soil	MEPDGEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNSMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ
Ga0207948_10455952	3300027174	Forest Soil	MEPNEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNSMVASSDEHKKAKRAARAGKRIWKRTVKAALQEKLDQ
Ga0209331_10408482	3300027603	Forest Soil	MEPDEEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGNSMVASSDEHKKAKRAAKAGKRIWKRAVKAALEEKLDQ
Ga0209331_10818901	3300027603	Forest Soil	MEPDEEQINLKTAKEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRESGLVATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ
Ga0209626_10561532	3300027684	Forest Soil	VKRVKIDDEAIVLDVVRRPEKRFVFEIMRDSILVATSDEHKTAKGAARAGKPIWKRTVISALKAKLDQ
Ga0209446_10062561	3300027698	Bog Forest Soil	LQTINEQTPERVTVNKVKIDEEVIALDVVRRAEKRFVFEIIRDNRNRLVASSDEHKTAKGAAKAGKPIWKRTVKAALKERLNQ
Ga0209656_100490712	3300027812	Bog Forest Soil	LKTANEQTPERVRVKSVKIDDEVIALDVVRRGEKRFVFEIMRDNGNRMVASSDEHNKAKRAARAGKRIWKRTVKSALKAKLDQ
Ga0209656_100589952	3300027812	Bog Forest Soil	LQTINEQTPERVTVNKVKIDEEVIALDVVRRAEKRFVFEIIRDNRNRLVASSDEHKTAKSAAKAGKPIWKRTVKAALKERLNQ
Ga0209040_103393571	3300027824	Bog Forest Soil	LQTINAQTSERVTVNKVKIDDEAIALDVVRRAEKRFVFEIIRDNRNRLVASSDEHKTAKSAARAGKPIWKRTVKAALKERLIQ
Ga0209380_100868163	3300027889	Soil	MEPNEQINLKTANEQAPERVTVKRVKIDDEVIALDVVRRAEKSFVFEIMRDNGLSATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ
Ga0209526_101586433	3300028047	Forest Soil	MEPNEQINLKTANEQAPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRDNGLSATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ
Ga0209526_104796011	3300028047	Forest Soil	VKRVKIDDEAIVLDVVRRPEKRFVFEIMRDSILVATSDEHKTAKRAARAGKPIWKRTAKLALKEKLDQ
Ga0311338_118382771	3300030007	Palsa	VKRLKIDDEAITLDVVRRAENRFVFEIMRDTTLVATSDERKTAKGAARAGKPIWKRTVKAALKAKLDQ
Ga0265460_109801182	3300030740	Soil	ERVTVKRVRIDDEAISLDVVRRAEKRFVFEIMRDNALIATSDEHKTANGAAKTGKPIWKRTAKLALKERLDQ
Ga0073996_100966143	3300030998	Soil	VKRVKIDDEAIVLDVVRRPEKRFVFEIMRDSILVATSDEHKTAKGAARAGKPIWKRTAKLALKEKLDQRA
Ga0073995_116867723	3300031047	Soil	TVKRVKIDDEVIALDVVRRAEKRFVFEIMRESGLVATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ
Ga0307475_114792302	3300031754	Hardwood Forest Soil	MEPDEQINLKTANEQTPERVTVKRVKIDDEVIALDVVRRAEKRFVFEIMRESGLVATSDEHKTAKGAARAGKPIWKRTVKSALKAKLDQ
Ga0311301_115878572	3300032160	Peatlands Soil	LQTINEQIPERVTVNKIKIDDEVIALDVVRRAEKRFVFEIIRDNRNRLVASSDEHKTAKRAARAGKPIWKRTVK
Ga0307472_1013772881	3300032205	Hardwood Forest Soil	LNNIDEKETKINMETTNEQTPERVTVKSVKIDDEVFALDVVKRGEKRFVFEIMRNNGNRMVASSDEHKKAKRAARAGKSIWKRTVKAALKEKLDQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080445

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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