Basic Information | |
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Family ID | F080468 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 115 |
Average Sequence Length | 50 residues |
Representative Sequence | PQVAIAASGEGTPFRLTLLRDATQAKASVDGDALGKISRENSNKVEKRS |
Number of Associated Samples | 91 |
Number of Associated Scaffolds | 115 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 94.78 % |
% of genes from short scaffolds (< 2000 bps) | 88.70 % |
Associated GOLD sequencing projects | 85 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.51 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (95.652 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.870 % of family members) |
Environment Ontology (ENVO) | Unclassified (21.739 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (50.435 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 29.87% Coil/Unstructured: 70.13% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.51 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 115 Family Scaffolds |
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PF07963 | N_methyl | 68.70 |
PF13544 | Obsolete Pfam Family | 13.04 |
PF13633 | Obsolete Pfam Family | 4.35 |
PF11612 | T2SSJ | 3.48 |
PF02501 | T2SSI | 3.48 |
PF03934 | T2SSK | 1.74 |
PF05134 | T2SSL | 1.74 |
PF00535 | Glycos_transf_2 | 0.87 |
PF01203 | T2SSN | 0.87 |
PF08352 | oligo_HPY | 0.87 |
PF00909 | Ammonium_transp | 0.87 |
COG ID | Name | Functional Category | % Frequency in 115 Family Scaffolds |
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COG3156 | Type II secretory pathway, component PulK | Intracellular trafficking, secretion, and vesicular transport [U] | 1.74 |
COG3297 | Type II secretory pathway, component PulL | Intracellular trafficking, secretion, and vesicular transport [U] | 1.74 |
COG0004 | Ammonia channel protein AmtB | Inorganic ion transport and metabolism [P] | 0.87 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 95.65 % |
Unclassified | root | N/A | 4.35 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300001593|JGI12635J15846_10575891 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 657 | Open in IMG/M |
3300003505|JGIcombinedJ51221_10234446 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 745 | Open in IMG/M |
3300004092|Ga0062389_100234204 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1844 | Open in IMG/M |
3300004092|Ga0062389_102792505 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 652 | Open in IMG/M |
3300005952|Ga0080026_10236783 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 548 | Open in IMG/M |
3300006172|Ga0075018_10005917 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 4375 | Open in IMG/M |
3300009089|Ga0099828_11722547 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 551 | Open in IMG/M |
3300009143|Ga0099792_11064309 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 543 | Open in IMG/M |
3300009500|Ga0116229_11295191 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 579 | Open in IMG/M |
3300009522|Ga0116218_1085771 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 1434 | Open in IMG/M |
3300009525|Ga0116220_10063399 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 1547 | Open in IMG/M |
3300009633|Ga0116129_1109115 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 798 | Open in IMG/M |
3300009787|Ga0116226_11642256 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 592 | Open in IMG/M |
3300009824|Ga0116219_10210826 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1110 | Open in IMG/M |
3300010159|Ga0099796_10086513 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 1159 | Open in IMG/M |
3300010371|Ga0134125_10498768 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 1348 | Open in IMG/M |
3300011009|Ga0129318_10377939 | Not Available | 502 | Open in IMG/M |
3300012205|Ga0137362_10391085 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1204 | Open in IMG/M |
3300012205|Ga0137362_11716017 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 515 | Open in IMG/M |
3300012925|Ga0137419_11171670 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 642 | Open in IMG/M |
3300012925|Ga0137419_11399349 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 590 | Open in IMG/M |
3300012925|Ga0137419_11561183 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 560 | Open in IMG/M |
3300014165|Ga0181523_10051217 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 2565 | Open in IMG/M |
3300014168|Ga0181534_10099647 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 1454 | Open in IMG/M |
3300014201|Ga0181537_10900048 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 599 | Open in IMG/M |
3300015052|Ga0137411_1131371 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 676 | Open in IMG/M |
3300015052|Ga0137411_1281765 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 515 | Open in IMG/M |
3300015164|Ga0167652_1036256 | All Organisms → cellular organisms → Bacteria | 961 | Open in IMG/M |
3300017946|Ga0187879_10257356 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 972 | Open in IMG/M |
3300018038|Ga0187855_10238724 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 1067 | Open in IMG/M |
3300018043|Ga0187887_10737195 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 582 | Open in IMG/M |
3300019886|Ga0193727_1006060 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 4874 | Open in IMG/M |
3300020579|Ga0210407_10569864 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 883 | Open in IMG/M |
3300020582|Ga0210395_10294938 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1219 | Open in IMG/M |
3300021086|Ga0179596_10303427 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 797 | Open in IMG/M |
3300021168|Ga0210406_10404693 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 1093 | Open in IMG/M |
3300021168|Ga0210406_10827983 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 702 | Open in IMG/M |
3300021168|Ga0210406_11333228 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 515 | Open in IMG/M |
3300021170|Ga0210400_10067387 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2799 | Open in IMG/M |
3300021170|Ga0210400_11268508 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 591 | Open in IMG/M |
3300021180|Ga0210396_10374891 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1253 | Open in IMG/M |
3300021180|Ga0210396_11024685 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 698 | Open in IMG/M |
3300021181|Ga0210388_11191223 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 647 | Open in IMG/M |
3300021181|Ga0210388_11204809 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 642 | Open in IMG/M |
3300021404|Ga0210389_10085250 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2428 | Open in IMG/M |
3300021405|Ga0210387_10445147 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1150 | Open in IMG/M |
3300021405|Ga0210387_10603092 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 975 | Open in IMG/M |
3300021433|Ga0210391_10051972 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 3259 | Open in IMG/M |
3300021433|Ga0210391_10965546 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 664 | Open in IMG/M |
3300021474|Ga0210390_11410018 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 554 | Open in IMG/M |
3300021474|Ga0210390_11567016 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 519 | Open in IMG/M |
3300021475|Ga0210392_11348739 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 533 | Open in IMG/M |
3300021478|Ga0210402_10172728 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1978 | Open in IMG/M |
3300021478|Ga0210402_11113497 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 717 | Open in IMG/M |
3300021478|Ga0210402_11577648 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 583 | Open in IMG/M |
3300021479|Ga0210410_10401546 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 1228 | Open in IMG/M |
3300025463|Ga0208193_1066640 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 748 | Open in IMG/M |
3300026214|Ga0209838_1067103 | Not Available | 540 | Open in IMG/M |
3300026217|Ga0209871_1096136 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 576 | Open in IMG/M |
3300026281|Ga0209863_10203365 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 573 | Open in IMG/M |
3300027330|Ga0207777_1086115 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 545 | Open in IMG/M |
3300027505|Ga0209218_1059912 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 775 | Open in IMG/M |
3300027559|Ga0209222_1077062 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 643 | Open in IMG/M |
3300027660|Ga0209736_1156825 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 603 | Open in IMG/M |
3300027676|Ga0209333_1184090 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 555 | Open in IMG/M |
3300027860|Ga0209611_10266196 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 1019 | Open in IMG/M |
3300027867|Ga0209167_10765761 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 526 | Open in IMG/M |
3300027903|Ga0209488_11083503 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 548 | Open in IMG/M |
3300028014|Ga0265345_103410 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 671 | Open in IMG/M |
3300028037|Ga0265349_1026216 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 539 | Open in IMG/M |
3300028047|Ga0209526_10832381 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 568 | Open in IMG/M |
3300028560|Ga0302144_10302157 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 518 | Open in IMG/M |
3300028566|Ga0302147_10032248 | All Organisms → cellular organisms → Bacteria | 1888 | Open in IMG/M |
3300028775|Ga0302231_10419247 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 564 | Open in IMG/M |
3300028783|Ga0302279_10111403 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1427 | Open in IMG/M |
3300028906|Ga0308309_10142622 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1917 | Open in IMG/M |
3300029911|Ga0311361_11175952 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 617 | Open in IMG/M |
3300029951|Ga0311371_10045822 | All Organisms → cellular organisms → Bacteria | 7517 | Open in IMG/M |
3300029954|Ga0311331_10745704 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 894 | Open in IMG/M |
3300029954|Ga0311331_10809281 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 843 | Open in IMG/M |
3300029954|Ga0311331_11592040 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 529 | Open in IMG/M |
3300030013|Ga0302178_10176781 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1041 | Open in IMG/M |
3300030399|Ga0311353_10351236 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 1338 | Open in IMG/M |
3300030520|Ga0311372_13090070 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 500 | Open in IMG/M |
3300030617|Ga0311356_10392279 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1372 | Open in IMG/M |
3300030618|Ga0311354_10180204 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 2277 | Open in IMG/M |
3300030618|Ga0311354_11013597 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 765 | Open in IMG/M |
3300030878|Ga0265770_1076427 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 648 | Open in IMG/M |
3300030906|Ga0302314_10788127 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 953 | Open in IMG/M |
3300031027|Ga0302308_10233869 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1162 | Open in IMG/M |
3300031057|Ga0170834_113252919 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 513 | Open in IMG/M |
3300031231|Ga0170824_103679831 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 842 | Open in IMG/M |
3300031231|Ga0170824_117774920 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 568 | Open in IMG/M |
3300031231|Ga0170824_124353951 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 571 | Open in IMG/M |
3300031234|Ga0302325_11927796 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 733 | Open in IMG/M |
3300031234|Ga0302325_12970889 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 549 | Open in IMG/M |
3300031236|Ga0302324_100009743 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 20018 | Open in IMG/M |
3300031258|Ga0302318_10648408 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 533 | Open in IMG/M |
3300031259|Ga0302187_10181981 | All Organisms → cellular organisms → Bacteria | 1109 | Open in IMG/M |
3300031446|Ga0170820_14816809 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 628 | Open in IMG/M |
3300031446|Ga0170820_17043162 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 587 | Open in IMG/M |
3300031446|Ga0170820_17867363 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 554 | Open in IMG/M |
3300031525|Ga0302326_10789154 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1371 | Open in IMG/M |
3300031718|Ga0307474_10448455 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans | 1008 | Open in IMG/M |
3300031718|Ga0307474_10830025 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 731 | Open in IMG/M |
3300031754|Ga0307475_10606913 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 876 | Open in IMG/M |
3300031788|Ga0302319_10272317 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 2022 | Open in IMG/M |
3300033480|Ga0316620_11524234 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 661 | Open in IMG/M |
3300033887|Ga0334790_193134 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 588 | Open in IMG/M |
3300034124|Ga0370483_0065987 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | 1160 | Open in IMG/M |
3300034129|Ga0370493_0287985 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 562 | Open in IMG/M |
3300034199|Ga0370514_196693 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium | 525 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 20.87% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 12.17% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 10.43% |
Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 8.70% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 6.09% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 6.09% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 3.48% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 2.61% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 2.61% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.61% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 2.61% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.61% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 2.61% |
Host-Associated | Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated | 2.61% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 1.74% |
Permafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil | 1.74% |
Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 0.87% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.87% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.87% |
Glacier Forefield Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil | 0.87% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.87% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.87% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 0.87% |
Prmafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil | 0.87% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.87% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 0.87% |
Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 0.87% |
Plant Litter | Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter | 0.87% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
3300003505 | Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924) | Environmental | Open in IMG/M |
3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300005952 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 | Environmental | Open in IMG/M |
3300006172 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014 | Environmental | Open in IMG/M |
3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
3300009500 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG | Host-Associated | Open in IMG/M |
3300009522 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG | Environmental | Open in IMG/M |
3300009525 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG | Environmental | Open in IMG/M |
3300009633 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 | Environmental | Open in IMG/M |
3300009787 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG | Host-Associated | Open in IMG/M |
3300009824 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG | Environmental | Open in IMG/M |
3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Environmental | Open in IMG/M |
3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
3300011009 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA | Environmental | Open in IMG/M |
3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300014165 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG | Environmental | Open in IMG/M |
3300014168 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG | Environmental | Open in IMG/M |
3300014201 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG | Environmental | Open in IMG/M |
3300015052 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300015164 | Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface) | Environmental | Open in IMG/M |
3300017946 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10 | Environmental | Open in IMG/M |
3300018034 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10 | Environmental | Open in IMG/M |
3300018038 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10 | Environmental | Open in IMG/M |
3300018043 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10 | Environmental | Open in IMG/M |
3300019886 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2 | Environmental | Open in IMG/M |
3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
3300020582 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O | Environmental | Open in IMG/M |
3300021086 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
3300021404 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O | Environmental | Open in IMG/M |
3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
3300025463 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes) | Environmental | Open in IMG/M |
3300026214 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes) | Environmental | Open in IMG/M |
3300026217 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes) | Environmental | Open in IMG/M |
3300026281 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes) | Environmental | Open in IMG/M |
3300027330 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes) | Environmental | Open in IMG/M |
3300027505 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes) | Environmental | Open in IMG/M |
3300027559 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes) | Environmental | Open in IMG/M |
3300027660 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027676 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes) | Environmental | Open in IMG/M |
3300027860 | Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes) | Host-Associated | Open in IMG/M |
3300027867 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
3300028014 | Plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE2 | Environmental | Open in IMG/M |
3300028037 | Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 | Environmental | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300028560 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2 | Environmental | Open in IMG/M |
3300028566 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2 | Environmental | Open in IMG/M |
3300028775 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2 | Environmental | Open in IMG/M |
3300028783 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3 | Environmental | Open in IMG/M |
3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
3300029911 | III_Bog_N2 coassembly | Environmental | Open in IMG/M |
3300029951 | III_Palsa_N1 coassembly | Environmental | Open in IMG/M |
3300029954 | I_Bog_N3 coassembly | Environmental | Open in IMG/M |
3300030013 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3 | Environmental | Open in IMG/M |
3300030399 | II_Palsa_E2 coassembly | Environmental | Open in IMG/M |
3300030520 | III_Palsa_N2 coassembly | Environmental | Open in IMG/M |
3300030617 | II_Palsa_N2 coassembly | Environmental | Open in IMG/M |
3300030618 | II_Palsa_E3 coassembly | Environmental | Open in IMG/M |
3300030878 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030906 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3 | Environmental | Open in IMG/M |
3300031027 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3 | Environmental | Open in IMG/M |
3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031234 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2 | Environmental | Open in IMG/M |
3300031236 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1 | Environmental | Open in IMG/M |
3300031258 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1 | Environmental | Open in IMG/M |
3300031259 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3 | Environmental | Open in IMG/M |
3300031446 | Fir Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
3300031718 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 | Environmental | Open in IMG/M |
3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
3300031788 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2 | Environmental | Open in IMG/M |
3300033480 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B | Environmental | Open in IMG/M |
3300033887 | Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1 | Environmental | Open in IMG/M |
3300034124 | Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14 | Environmental | Open in IMG/M |
3300034129 | Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16 | Environmental | Open in IMG/M |
3300034199 | Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12635J15846_105758911 | 3300001593 | Forest Soil | VAIAASGEGTPFRLTLLRDATQAKASVDGDALGXISREXSNKVXKRS* |
JGIcombinedJ51221_102344461 | 3300003505 | Forest Soil | PPPPQVAIAASGEGTPFRLTLLRDETQARAAVNGDAFGKTTQEGSDHPRANRS* |
Ga0062384_1012340672 | 3300004082 | Bog Forest Soil | PQVGIAASGEGTPFRLILVRQDTGARASVSGDALGKVTQVSSDKPDKTEKRS* |
Ga0062389_1002342044 | 3300004092 | Bog Forest Soil | ASGEGTPFRLTLQRDGTTAKASVEGDALGKISRIASDHQEKRT* |
Ga0062389_1027925052 | 3300004092 | Bog Forest Soil | PPPPPQVAIAASGEGTPFRLTLLRDATQATAAVDGDALGKITRESSNRVEKST* |
Ga0080026_102367831 | 3300005952 | Permafrost Soil | ASGEGTPFRLILLRDATQAKAVVDGDALGKISREGSNKVEKRS* |
Ga0075018_100059177 | 3300006172 | Watersheds | PYRLTLLREATQAKTTVSGDAMGKTSYDNSNKVANTT* |
Ga0099828_117225472 | 3300009089 | Vadose Zone Soil | LAIAASGEGTPFRLTLLRDGTASKASVDGDALGKISRVSSDQHVSSDQSEKRT* |
Ga0099792_110643091 | 3300009143 | Vadose Zone Soil | LTNDAAPPAPQLAIAASGEGTPFRLTLLRDGTASKASVDGDALGKISRISSDHPEKRT* |
Ga0116229_112951911 | 3300009500 | Host-Associated | SGEGTPFRLTLLRDATQARASVDGDAFGKTSHESSDHPAAKRT* |
Ga0116218_10857711 | 3300009522 | Peatlands Soil | PQVAIAASGEGTPFRLTLLREATRTRTSVDGNAFGKTTIENSNQPEKTT* |
Ga0116220_100633994 | 3300009525 | Peatlands Soil | QLPNPQVAIAASGEGTPFRLTLQRDATNAKASVDGDALGKISRESSDQPEKRS* |
Ga0116129_11091152 | 3300009633 | Peatland | DTNLSNGAPPNPQIAIAASGEGTPFRLILQRDATQAKTAVDGDSLGKVSREGSNKVEKRT |
Ga0116226_116422562 | 3300009787 | Host-Associated | AAPQVAIAASGEGTPFRLTLTRDATRASATVSGDALGKVSREGSDHPSDHPDKRS* |
Ga0116219_102108261 | 3300009824 | Peatlands Soil | KNLSSGQLPNPQVAIAASGEGTPFRLTLQRDATNAKASVDGDALGKISRESSDQPEKRS* |
Ga0099796_100865131 | 3300010159 | Vadose Zone Soil | QTRPNAQVAIAAGGEGTPFRLTLERAATNAKASVEGDALGKISRVGSDHVDKRT* |
Ga0134125_104987681 | 3300010371 | Terrestrial Soil | PQLAIAASGEGTPFRLTLLREGTTAQASVNGDALGKLSRVASDQREKHS* |
Ga0129318_103779391 | 3300011009 | Freshwater To Marine Saline Gradient | NLVSNTPLTPQLAIAASGEGTPFRLTLQREETKAKASVDGDALGKISRESSDQPEKRT* |
Ga0137362_103910853 | 3300012205 | Vadose Zone Soil | PAPQLAIAASGEGTPFRLTLLRDGAASRASVDGDALGKITRLSSDHPGKRT* |
Ga0137362_117160172 | 3300012205 | Vadose Zone Soil | DQPNPQVAIAASGEGTPFRLTLQRNATQAKASVDGDALGKISREDSNKVEKRS* |
Ga0137419_111716701 | 3300012925 | Vadose Zone Soil | VAIAASGDGTPFRLILLREATQAKAVVDGDALGKISREDSNKVEKRS* |
Ga0137419_113993491 | 3300012925 | Vadose Zone Soil | LSSDAAPPAPQLAIAASGEGTPFHLTLLRDGTSAKASVDGDALGKITRTSSDHQEKRS* |
Ga0137419_115611832 | 3300012925 | Vadose Zone Soil | EGTPFRLTLERAATNAKASVEGDALGKISRVGSDHVDKRT* |
Ga0181523_100512174 | 3300014165 | Bog | AIAASGEGTPFRLTLLREATRTRTSVDGNAFGKTTIENSNQPEKPT* |
Ga0181534_100996471 | 3300014168 | Bog | VAIAASGEGTPFRLTLSREATQAHATVDGNSLGKITRQGSDHQPDRRS* |
Ga0181537_109000482 | 3300014201 | Bog | LAIAASGEGTPFRLTLLRDATQARASVDGDAMGKISHENSNHVDKPT* |
Ga0137411_11313711 | 3300015052 | Vadose Zone Soil | SDQASGNPQVAIAASGEGTPFRLTLERAAAATNAKASVEGDALGKISRVSSDHVDKRT* |
Ga0137411_12817651 | 3300015052 | Vadose Zone Soil | LKSDQASGNPQVAIAASGEGTPFRLTLERAATNAKASVEGDALGKISRVSSDHVDKRT* |
Ga0167652_10362562 | 3300015164 | Glacier Forefield Soil | MIASATSSGLAIAASGDGTPFRLTLLRDQTRARASVDGDALGKLSHLNSDQPDKRT* |
Ga0187879_102573563 | 3300017946 | Peatland | PNPQVAIAASGEGTPFRLTLQRDATNAKASVDGDALGKISRESSDQPEKRS |
Ga0187863_103194152 | 3300018034 | Peatland | FLKPCARALPDETPPPAPQVASAASGEGTPFRLTLLRDTTQSKASVSGDSLGKISRLGSEQPDKRS |
Ga0187855_102387243 | 3300018038 | Peatland | PPPQVAIAASGEGTPFRLTLLRDATQAKTSVDGDAFGKTSRESSDYRPEKRT |
Ga0187887_107371952 | 3300018043 | Peatland | ASGEGTPFRLTLLRAATQARAAVDGDAFGKTRLESSDHPPEKRS |
Ga0193727_10060601 | 3300019886 | Soil | FRLTLQRDATQAKASVDGDALGKISRENSNKVEKRS |
Ga0210407_105698641 | 3300020579 | Soil | PNPQVAIAASGEGTPFRLTLERAATNAKASVEGDALGKISRVGSNHADKRT |
Ga0210395_102949383 | 3300020582 | Soil | RTLSSDTPPPGPQVAIAASGEGTPFRLTLFRDATQAKAAVNGDALGKITRENTNQVEKRT |
Ga0179596_103034273 | 3300021086 | Vadose Zone Soil | GTPFRLTLERAATNAKSSVEGDALGKISRVSSDHVDKRT |
Ga0210406_104046931 | 3300021168 | Soil | RLTLGRAATNARASVEGDALGKISRVSSDHVDKRT |
Ga0210406_108279831 | 3300021168 | Soil | AKNDAPPGPQVAIAASGEGTPFRLTLQREGTTAKASVDGDALGKVSRVSSDHQEKPT |
Ga0210406_113332282 | 3300021168 | Soil | NPQVAIAASGEGTPFRLTLQRDATQAKASVDGDALGKISRENSNKVEKRS |
Ga0210400_100673871 | 3300021170 | Soil | PQVAIAASGEGTPFRLTLLRDGTAAKASVGGDALGKVSRVASDQQEKRS |
Ga0210400_112685082 | 3300021170 | Soil | IAASGEGTPFRLILLRDATQAKAVVDGDALGKISREGSNKVAKRS |
Ga0210396_103748911 | 3300021180 | Soil | ASGEGTPFRLILLRAATQAKAVVDGDALGKISREGSNKVEKRS |
Ga0210396_110246852 | 3300021180 | Soil | AASGEGTPFRLTLLRDATQAKASVDGDALGKITRESSNQVERRT |
Ga0210388_111912232 | 3300021181 | Soil | QVAIAASGEGTPFRLTLTREATQASTSVNGDAFGKTTLVSSDHPPDKRS |
Ga0210388_112048092 | 3300021181 | Soil | RNLSNGAPPNPQIAIAASGDGTPFRLILLRDATQAKAVVDGDALGKISREGSNKVEKRT |
Ga0210389_100852504 | 3300021404 | Soil | AASGEGTPFRLTLLRDGTAAKASVDGDAMGKITQVGSDRPVSPDRPEKRS |
Ga0210387_104451473 | 3300021405 | Soil | PQVAIAASGEGTPFRLTLLRDGTAAKASVDGDALGKVSRVSSDHPAEKRT |
Ga0210387_106030921 | 3300021405 | Soil | NGAPPNPQIAIAASGEGTPFRLILQRDATQAKTAVDGDSLGKVSREGSNKVEKRT |
Ga0210383_104280933 | 3300021407 | Soil | FRLTLLRYVTQAKASVDGDALGKITRESSNQVEKTT |
Ga0210391_100519721 | 3300021433 | Soil | GPQVAIAASGEGTPFRLTLLRDGTAAKASVGGDALGKVSRVASDQQEKRS |
Ga0210391_109655461 | 3300021433 | Soil | PQVAIAASGEGTPFRLTLLRDATQAKASVDGDALGKISRENSNKVEKRS |
Ga0210390_114100181 | 3300021474 | Soil | SNDAPPPPQVAIAASGEGTPFRLTLWRDVTQAKASVDGDALGKITHESSNQVEKTT |
Ga0210390_115670162 | 3300021474 | Soil | GLSSDAPPPPQVAIAASGEGTPFRLTLLRDETQAHAAVNGDAFGKTTQEGSDHPRANRS |
Ga0210392_113487392 | 3300021475 | Soil | PVDRNLSNGAPPNPQIAIAASGEGTPFRLILLRDATQAKAAVDGDALGKVSREGSNKVEKRT |
Ga0210402_101727284 | 3300021478 | Soil | EGTPFRLILLREATQAKTAVDGDALGKVSRQGSNKVEKRS |
Ga0210402_111134971 | 3300021478 | Soil | PRPQVAIAASGEGTPFRLILLREATQAKAVVDGDALGKISREDSNRVEKRT |
Ga0210402_115776482 | 3300021478 | Soil | SPQVAIAASGEGTPFRLTLGRAATNARASVEGDALGKISRVSSDHVDKRT |
Ga0210410_104015461 | 3300021479 | Soil | GPQVAIAASGEGTPFRLTLLRDGTAAKASVDGDALGKVSRVSSDHPAEKRT |
Ga0208193_10666402 | 3300025463 | Peatland | ASGEGTPFRLILQRDATQAKTAVDGDSLGKVSREGSNKVEKRT |
Ga0209838_10671032 | 3300026214 | Soil | VGGHSAGRNLSSGEPPRPQVAIAASGDGTPFRLILLREATQAKAVVDGDALGTVSREDSNKVEKPS |
Ga0209871_10961361 | 3300026217 | Permafrost Soil | ASGEGTPFRLILLRDATQAKAVVDGDALGKISREGSNKVEKRS |
Ga0209863_102033651 | 3300026281 | Prmafrost Soil | PFRLILLREATQAKAVVDGDALGKVSREDSNKVEKPS |
Ga0207777_10861151 | 3300027330 | Tropical Forest Soil | PQVAIAASGEGTPFRLTLLRNATQAKATVDGNAMGKITHQDSNHVGKSS |
Ga0209218_10599123 | 3300027505 | Forest Soil | PFRLILQRDATQAKTAVDGDSLGKVSREGSNKVEKRT |
Ga0209222_10770623 | 3300027559 | Forest Soil | PPPPQVAIAASGEGTPFRLTLLRDETQAHAAVNGDAFGKTTQEGSDHPRANRS |
Ga0209736_11568251 | 3300027660 | Forest Soil | EGTPFRLTLQRDATQAKASVDGDALGKISRENSNKVEKRS |
Ga0209333_11840901 | 3300027676 | Forest Soil | PPQVAIAASGEGTPFRLTLLRDATKAKASVDGDAFGKTSRENSDQPEKHT |
Ga0209611_102661963 | 3300027860 | Host-Associated | SANAPPPPQVAIAASGEGTPFRLTLQRDATQARAAVSGDVFGKTTHQSSDHPQEKRS |
Ga0209167_107657611 | 3300027867 | Surface Soil | TLTNDAAPPAPQLAIAASGEGTPFRLTLLREGTSSRATVDGDALGKITRVSSDHPEKRT |
Ga0209488_110835031 | 3300027903 | Vadose Zone Soil | EGTPFRLTLERAATNAKASVEGDALGKISRVGSDHVDKRT |
Ga0265345_1034102 | 3300028014 | Plant Litter | IDRNLSGGDPPGPQVAIAASGEGTPFRLILLREATQAKAVVNGDALGKVSSEASNKVEKR |
Ga0265349_10262161 | 3300028037 | Soil | NLSNGAPPNPQIAIAASGEGTPFRLILQRDATQAKTAVDGDSLGKVSREGSNKVEKRS |
Ga0209526_108323812 | 3300028047 | Forest Soil | PPAPQLAIAASGEGTPFKLTLLRDGTSSKASVDGDALGKITRVSSSQPEKRT |
Ga0302144_103021571 | 3300028560 | Bog | AVAASGEGTPFRLTLLRDATHAQASVDGDAFGKISHESSNQVEKRS |
Ga0302147_100322481 | 3300028566 | Bog | IAASGEGTPFRLTLLRDATKAQSSVSGDSLGKTTRIGSDQPVKKPP |
Ga0302231_104192471 | 3300028775 | Palsa | DTPPPPQVAIAASGEGTPFRLTLLRDATQARAAVAGDAFGKTTQEGSDHPRQNRS |
Ga0302279_101114033 | 3300028783 | Bog | TNLNDGPPPGPQLAIAASGEGTPFRLTLLRDATQARAAVDGDAFGKTRLESSDHPPEKRS |
Ga0308309_101426221 | 3300028906 | Soil | PNPQIAIAASGEGTPFRLILQRDATQARTAVDGDSLGKVSREGSNKVEKRT |
Ga0311361_111759521 | 3300029911 | Bog | VAIAASGEGTPFRLTLLRDATQARASVNGDAFGKTSHQSSDHPTERRS |
Ga0311371_1004582212 | 3300029951 | Palsa | SGDSPPPPQVAIAASGEGTPFRLTLLRDETQARAAVNGDAFGKTTQEGSDHPRANRS |
Ga0311331_107457041 | 3300029954 | Bog | NLSSNQTPPAPQIAIAASGEGTPFRLTLLRDGPKARASVDGDSLGKLSHVTSDQPEKRT |
Ga0311331_108092812 | 3300029954 | Bog | DGAPPSPQVAIAASGEGTPFRLTLLRDATQARASVDGDAFGKTSHQSSDHPPEKRS |
Ga0311331_115920401 | 3300029954 | Bog | IAIAASGEGTPFRLTLQRAQSNAKASVDGDALGKISRESSDHPEKHS |
Ga0302178_101767813 | 3300030013 | Palsa | TPFRLTLSRDATQAKASVDGDAFGKTSRENSDQPEKRT |
Ga0311353_103512363 | 3300030399 | Palsa | EGTPFRLILQRDATQAKAAVDGDSLGKISRESSNHQEKPVS |
Ga0311372_130900702 | 3300030520 | Palsa | PQLAIAASGEGTPFRLTLLRDGSQARASVNGDSLGKLTRISSDQREKPS |
Ga0311356_103922791 | 3300030617 | Palsa | PPPPPQVAIAASGEGTPFHLTLLREETQARASVNGDAFGKTSQESSDHPPAKRS |
Ga0311354_101802041 | 3300030618 | Palsa | TPFRLILQRDGTQAKAAIDGDALGKVSREGSNKVEKRS |
Ga0311354_110135972 | 3300030618 | Palsa | DSPPPPQVAIAASGEGTPFRLTLLRDETQARAAVNGDAFGKTTQEGSDHPRANRS |
Ga0265770_10764272 | 3300030878 | Soil | EAPPGPQVAIAASGEGTPFRLTLLRDGTAAKASVGGDALGKISHVASDHPEKPS |
Ga0302314_107881273 | 3300030906 | Palsa | SGEGTPFRLILQRDATQAKAAVDGDSLGKISRESSNHQEKPVS |
Ga0302308_102338693 | 3300031027 | Palsa | IAASGEGTPFRLTLSRDATQAKASVDGDAFGKTSRENSDQPEKRT |
Ga0170834_1132529192 | 3300031057 | Forest Soil | GPQVAIAASGEGTPFRLILLREATQAKAVVDGDALGKISREASNKVEKRT |
Ga0170824_1036798311 | 3300031231 | Forest Soil | PQVAIAASGEGTPFRLILLRDATQAKAAVDGDAMGKVSRQGSNKVEKRS |
Ga0170824_1177749201 | 3300031231 | Forest Soil | RTLASDDLPGPQVSIAASGDGTPFRLTLLRVATQAKAAIDGDSLGKITREKSNAVSNPVEKRT |
Ga0170824_1243539511 | 3300031231 | Forest Soil | PFRLTLLRAATQAKASVDGDALGKISRENSNKVEKRS |
Ga0302325_119277961 | 3300031234 | Palsa | EGTPFRLILLRDATQAQAAVDGDALGKISLQTSDHSQPAKRG |
Ga0302325_129708891 | 3300031234 | Palsa | PPPAPQVAIAASGEGTPFRLTLLRDATKAKASVDGDAFGKTSRENSDQPAKRT |
Ga0302324_10000974320 | 3300031236 | Palsa | SSGPPPNPQIAIAASGDGTPFRLILQRDGTQAKAAIDGDALGKVSREGSNKVEKRS |
Ga0302318_106484082 | 3300031258 | Bog | QVDQNLKTDELPNPQIAVAASGEGTPFHLTLIRDQTNTKASVNGDAFGKLTRESSDQPVKRS |
Ga0302187_101819813 | 3300031259 | Bog | PIDGNAASDDAPAPPQLAIAASGEGTPFRLTLLRDATKAQSSVSGDSLGKTTRIGSDQPVKKPP |
Ga0170820_148168091 | 3300031446 | Forest Soil | APPTPQVAIAASGEGTPFRLTLMRDGTTATASVDGDALGKISRVGSEQPEKRT |
Ga0170820_170431622 | 3300031446 | Forest Soil | VAACGEGTPFRLTLTRDETKAKASVDGDALGKISRESSDQPEKRT |
Ga0170820_178673631 | 3300031446 | Forest Soil | RNPAADAPAPGPQLAIAASGEGTPFRLTLLRDGTTARASVSGDALGKLSRISSDHPEKAT |
Ga0302326_107891543 | 3300031525 | Palsa | VAVAASGEGTPFRLTLTRDATRASASVDGDAFGKITRASSDHPASSDHPPAKHT |
Ga0307474_104484553 | 3300031718 | Hardwood Forest Soil | SNGAPPNPQIAIAASGEGTPFRLILQRDATQAKTAVDGDSLGKISREGSNKVEKRS |
Ga0307474_108300252 | 3300031718 | Hardwood Forest Soil | RLTLQRDATQAKASVDGDALGKISRENSNKVEKRS |
Ga0307475_106069133 | 3300031754 | Hardwood Forest Soil | ANPQVAIAASGEGTPFRLTLERAATNSRASVAGDALGKISRVGSDQVDKRT |
Ga0302319_102723174 | 3300031788 | Bog | TDLLPNPQIAIAASGEGTPFRLTLQREVTKAQASVDGDAFGKISRESPDQPGKHS |
Ga0316620_115242342 | 3300033480 | Soil | AAAPQGAIAASGDGTPFRLTLLRDSTQAKAVIVGDAMGKTTLEGAAPPAKKS |
Ga0334790_193134_401_586 | 3300033887 | Soil | VDKNLSTDQLPTPQVAIAASGEGTPFRLTLVREQTHAKAAVDGDAFGKVSRESSDQPEKR |
Ga0370483_0065987_997_1140 | 3300034124 | Untreated Peat Soil | VAIAASGEGTPFRLTLLRDGTQAKASVDGDALGKVSHISSDTRQKPT |
Ga0370493_0287985_370_561 | 3300034129 | Untreated Peat Soil | TFSSDAAPPGPQLAIAASGDGTPFRLTLMREGTKARASVAGDALGKLTQKNSDQPDNQPDKHT |
Ga0370514_196693_390_524 | 3300034199 | Untreated Peat Soil | AASGEGTPFRLTLQRDQTNAKASVDGDAFGKISRENSDQPEKRS |
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