Metagenome / Metatranscriptome Family F080474

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080474
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	120 residues
Representative Sequence	NGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Number of Associated Samples	102
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.52 %
% of genes from short scaffolds (< 2000 bps)	90.43 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.304 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (6.957 % of family members)
Environment Ontology (ENVO)	Unclassified (47.826 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.435 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.67% β-sheet: 34.67% Coil/Unstructured: 62.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF03734	YkuD	26.96
PF13977	TetR_C_6	0.87
PF09391	DUF2000	0.87
PF00266	Aminotran_5	0.87
PF03466	LysR_substrate	0.87
PF12704	MacB_PCD	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	26.96
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	26.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
All Organisms	root	All Organisms	48.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
cellular organisms	root	All Organisms → cellular organisms	48.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	31.30 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	31.30 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	20.00 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	3.48 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	20.00 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.48 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	20.00 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.48 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	13.04 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	3.48 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.48 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	13.04 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	3.48 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.48 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	1.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	13.04 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	3.48 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3.48 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2416089	Not Available	555	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14550872	Not Available	555	Open in IMG/M
3300000559\|F14TC_101666432	Not Available	546	Open in IMG/M
3300000956\|JGI10216J12902_104318381	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2267	Open in IMG/M
3300005093\|Ga0062594_102613582	Not Available	557	Open in IMG/M
3300005290\|Ga0065712_10427543	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005294\|Ga0065705_10026972	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1803	Open in IMG/M
3300005327\|Ga0070658_10866593	Not Available	785	Open in IMG/M
3300005328\|Ga0070676_10301081	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1087	Open in IMG/M
3300005330\|Ga0070690_100641522	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	810	Open in IMG/M
3300005334\|Ga0068869_100088153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2329	Open in IMG/M
3300005339\|Ga0070660_100300482	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1316	Open in IMG/M
3300005339\|Ga0070660_101483401	Not Available	576	Open in IMG/M
3300005343\|Ga0070687_100297526	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1022	Open in IMG/M
3300005355\|Ga0070671_100147892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1983	Open in IMG/M
3300005436\|Ga0070713_101307076	Not Available	703	Open in IMG/M
3300005439\|Ga0070711_101429140	Not Available	602	Open in IMG/M
3300005441\|Ga0070700_100116412	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300005459\|Ga0068867_101242691	Not Available	686	Open in IMG/M
3300005466\|Ga0070685_10072988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2038	Open in IMG/M
3300005518\|Ga0070699_100027430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4911	Open in IMG/M
3300005535\|Ga0070684_101624950	Not Available	610	Open in IMG/M
3300005549\|Ga0070704_100896899	Not Available	797	Open in IMG/M
3300005616\|Ga0068852_101111368	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	811	Open in IMG/M
3300005617\|Ga0068859_101460515	Not Available	754	Open in IMG/M
3300005618\|Ga0068864_100392676	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1317	Open in IMG/M
3300005618\|Ga0068864_102367963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	537	Open in IMG/M
3300005718\|Ga0068866_10278642	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1035	Open in IMG/M
3300005719\|Ga0068861_100097557	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2331	Open in IMG/M
3300005844\|Ga0068862_100693205	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	986	Open in IMG/M
3300006169\|Ga0082029_1384170	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300006237\|Ga0097621_101310856	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300006852\|Ga0075433_10079215	All Organisms → cellular organisms → Bacteria	2895	Open in IMG/M
3300006876\|Ga0079217_10164573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1092	Open in IMG/M
3300006881\|Ga0068865_101407283	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300006969\|Ga0075419_10141030	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300007004\|Ga0079218_10142049	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300007004\|Ga0079218_11017772	Not Available	832	Open in IMG/M
3300009093\|Ga0105240_11071669	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	859	Open in IMG/M
3300009098\|Ga0105245_10381481	Not Available	1404	Open in IMG/M
3300009148\|Ga0105243_10734073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	966	Open in IMG/M
3300009174\|Ga0105241_11402310	Not Available	669	Open in IMG/M
3300009177\|Ga0105248_11056340	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	918	Open in IMG/M
3300009553\|Ga0105249_12176190	Not Available	627	Open in IMG/M
3300010036\|Ga0126305_10358410	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	956	Open in IMG/M
3300010037\|Ga0126304_10159790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1462	Open in IMG/M
3300010045\|Ga0126311_11717047	Not Available	530	Open in IMG/M
3300010398\|Ga0126383_10501085	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1273	Open in IMG/M
3300010401\|Ga0134121_11291989	Not Available	735	Open in IMG/M
3300011332\|Ga0126317_10277305	Not Available	511	Open in IMG/M
3300012212\|Ga0150985_108814688	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1629	Open in IMG/M
3300012212\|Ga0150985_113490509	Not Available	524	Open in IMG/M
3300012212\|Ga0150985_113871096	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1053	Open in IMG/M
3300012469\|Ga0150984_104268093	Not Available	694	Open in IMG/M
3300012514\|Ga0157330_1002942	Not Available	1285	Open in IMG/M
3300012957\|Ga0164303_11226364	Not Available	550	Open in IMG/M
3300012961\|Ga0164302_10313135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1031	Open in IMG/M
3300012989\|Ga0164305_10956695	Not Available	724	Open in IMG/M
3300013104\|Ga0157370_11011927	Not Available	752	Open in IMG/M
3300013306\|Ga0163162_10123190	All Organisms → cellular organisms → Bacteria	2698	Open in IMG/M
3300013307\|Ga0157372_11651775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	737	Open in IMG/M
3300013308\|Ga0157375_10389904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1560	Open in IMG/M
3300013308\|Ga0157375_10424709	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1495	Open in IMG/M
3300014325\|Ga0163163_10721502	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1060	Open in IMG/M
3300015262\|Ga0182007_10041406	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300015371\|Ga0132258_13465916	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1081	Open in IMG/M
3300015372\|Ga0132256_102098152	Not Available	671	Open in IMG/M
3300015373\|Ga0132257_100365201	All Organisms → cellular organisms → Bacteria	1748	Open in IMG/M
3300015373\|Ga0132257_103663011	Not Available	559	Open in IMG/M
3300015374\|Ga0132255_100170217	All Organisms → cellular organisms → Bacteria	3058	Open in IMG/M
3300015374\|Ga0132255_103817888	Not Available	640	Open in IMG/M
3300015374\|Ga0132255_106319275	Not Available	501	Open in IMG/M
3300018476\|Ga0190274_10916906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	944	Open in IMG/M
3300020069\|Ga0197907_10659209	Not Available	1098	Open in IMG/M
3300020070\|Ga0206356_10327328	Not Available	537	Open in IMG/M
3300021560\|Ga0126371_13276959	Not Available	547	Open in IMG/M
3300025885\|Ga0207653_10274304	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300025899\|Ga0207642_10028408	All Organisms → cellular organisms → Bacteria	2303	Open in IMG/M
3300025909\|Ga0207705_11255766	Not Available	567	Open in IMG/M
3300025911\|Ga0207654_10566203	Not Available	808	Open in IMG/M
3300025912\|Ga0207707_11257065	Not Available	597	Open in IMG/M
3300025919\|Ga0207657_10035235	All Organisms → cellular organisms → Bacteria	4489	Open in IMG/M
3300025931\|Ga0207644_10798315	Not Available	789	Open in IMG/M
3300025932\|Ga0207690_11134133	Not Available	652	Open in IMG/M
3300025932\|Ga0207690_11786264	Not Available	513	Open in IMG/M
3300025933\|Ga0207706_10532025	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1013	Open in IMG/M
3300025944\|Ga0207661_11987728	Not Available	527	Open in IMG/M
3300025960\|Ga0207651_12093193	Not Available	508	Open in IMG/M
3300025981\|Ga0207640_11447742	Not Available	616	Open in IMG/M
3300025986\|Ga0207658_10233004	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1555	Open in IMG/M
3300026041\|Ga0207639_11965847	Not Available	546	Open in IMG/M
3300026075\|Ga0207708_10154302	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300026078\|Ga0207702_11746453	Not Available	615	Open in IMG/M
3300026095\|Ga0207676_10403867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1277	Open in IMG/M
3300026142\|Ga0207698_11531889	Not Available	682	Open in IMG/M
3300027637\|Ga0209818_1077040	Not Available	851	Open in IMG/M
3300027873\|Ga0209814_10202540	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	858	Open in IMG/M
3300027886\|Ga0209486_10082041	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300027886\|Ga0209486_11069748	Not Available	546	Open in IMG/M
3300027909\|Ga0209382_10234352	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300027909\|Ga0209382_11630853	Not Available	636	Open in IMG/M
3300027909\|Ga0209382_11754215	Not Available	607	Open in IMG/M
3300028379\|Ga0268266_10644507	Not Available	1019	Open in IMG/M
3300028596\|Ga0247821_10728216	Not Available	649	Open in IMG/M
3300031481\|Ga0314816_1053814	Not Available	542	Open in IMG/M
3300031490\|Ga0314825_110147	Not Available	577	Open in IMG/M
3300031538\|Ga0310888_10109365	Not Available	1419	Open in IMG/M
3300031731\|Ga0307405_11277721	Not Available	638	Open in IMG/M
3300031824\|Ga0307413_10642097	Not Available	874	Open in IMG/M
3300031847\|Ga0310907_10846998	Not Available	514	Open in IMG/M
3300031854\|Ga0310904_10747240	Not Available	680	Open in IMG/M
3300031943\|Ga0310885_10254901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	890	Open in IMG/M
3300031944\|Ga0310884_10836246	Not Available	565	Open in IMG/M
3300031995\|Ga0307409_100252193	Not Available	1614	Open in IMG/M
3300033551\|Ga0247830_10488366	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	967	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.39%
Environmental	Environmental	42.61%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	57.39%
Terrestrial	Environmental → Terrestrial	40.00%
Aquatic	Environmental → Aquatic	2.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.48%
Freshwater	Environmental → Aquatic → Freshwater	2.61%
Roots	Host-Associated → Plants → Roots	1.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.91%
Loam	Environmental → Terrestrial → Soil → Loam	12.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.70%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.61%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.74%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.09%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.09%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.22%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.22%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.35%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300031481	Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_N_R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031490	Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_24160892	3300000033	Soil	RSAGENGLTSQPDDPNIWSATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFIESRYTTAYTEGENTKWVPVVIGLKWR
ICChiseqgaiiFebDRAFT_145508722	3300000363	Soil	LNGRSAGENGLTSQPDDPNIWSATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFIESRYTTAYTEGENTKWVPVVIGLKWR*
F14TC_1016664321	3300000559	Soil	DPNIWSATANLTLDLARFGESRRGALYLVGGGGVFRFTDFNNFDRSDNDPESSXXXKPVTKGGLTGGAGLAFPIGGASLFLESRYTNAFTEGENTRWVPIVVGLKWR*
JGI10216J12902_1043183811	3300000956	Soil	NIWSATANLTLDLMKFGQDRRGALYLVGGGGVYRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPIGGASFFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0062594_1026135822	3300005093	Soil	VSFPLGFRVDLGYSRFNGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR*
Ga0065712_104275431	3300005290	Miscanthus Rhizosphere	PVSFPLGFRVDLGYSRFNGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR*
Ga0065705_100269721	3300005294	Switchgrass Rhizosphere	RFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070658_108665932	3300005327	Corn Rhizosphere	DLGYSRFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0070676_103010811	3300005328	Miscanthus Rhizosphere	LDLLRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFQGEPVTKGGLTGGAGLAFPIGGTSLFVESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0070690_1006415221	3300005330	Switchgrass Rhizosphere	SSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0068869_1000881533	3300005334	Miscanthus Rhizosphere	DLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070660_1003004822	3300005339	Corn Rhizosphere	DLGYSRFNGREAGTNGLLAQPDDPNIWSATANLTLDLFKFGQERRGSLYLLGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFLESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070660_1014834011	3300005339	Corn Rhizosphere	AQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070687_1002975261	3300005343	Switchgrass Rhizosphere	PVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070671_1001478921	3300005355	Switchgrass Rhizosphere	VEVPIGYQPVSSPLGFRIDLGYSRFNGREAGTNGLLAQPDDPNIWSATANLTLDLLKFGQERRGSLYLVGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVAGASLFVESRYTTAYTQGQETRWVPVVIGLKWH*
Ga0070713_1013070761	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ATANLTLDLVKFGQARRGALYLVGGGGVYRFTNFYDTNRSSSDFTSAFEGTPTTKGGVTGGAGLAMPIGGTSLFVESRYTTAHTQGEETRWVPVVIGLKWR*
Ga0070711_1014291402	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	FNVEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLLAQPVDPNIWSATANLTLDLVKFGQARRGALYLVGGGGVYRFTNFYDTNRSSSDFTSAFEGTPTTKGGVTGGAGLAMPIGGTSLFVESRYTTAHTQGEETRWVPVVIGLKWR*
Ga0070700_1001164123	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	DDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0068867_1012426912	3300005459	Miscanthus Rhizosphere	GTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWH*
Ga0070685_100729881	3300005466	Switchgrass Rhizosphere	TAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0070699_1000274301	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DPNIWSATGNLTLDLLKFGESRRGALYLVGGGGLYRFTNFFSGDRSDNEVQSAFEGKPVTKGGLTGGAGLAFPIGGASLFVESRYTNAYTKGEETRWVPIIFGLKWR*
Ga0070684_1016249502	3300005535	Corn Rhizosphere	DPNIWSATANLTLDLLKFGESRRGSLYLVGGGGLFRFTDFYNSDASDNDVTSAFQGSPVTKGGVTGGAGLAFPIGGTSLFVETRYTTAYTEGNNTRWVPVVFGLKWR*
Ga0070704_1008968992	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GENGLTSQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0068852_1011113681	3300005616	Corn Rhizosphere	LTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0068859_1014605152	3300005617	Switchgrass Rhizosphere	VEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0068864_1003926762	3300005618	Switchgrass Rhizosphere	WSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0068864_1023679631	3300005618	Switchgrass Rhizosphere	GWQSQNSILGFRIDLGYSRFNGREAGTSGLSSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0068866_102786422	3300005718	Miscanthus Rhizosphere	TANLTLDLLKFGQERRGSLYLVGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWH*
Ga0068861_1000975574	3300005719	Switchgrass Rhizosphere	FGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0068862_1006932052	3300005844	Switchgrass Rhizosphere	GLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0082029_13841701	3300006169	Termite Nest	NGLSAQPDDPNTWSATANLTLDLMRFGAEKRGALYLVGGGGVFRFTDFFNTDRSDNDVESAFEGSPVTKGGLTGGAGLALPIGSTSLFVESRYTTAYTEGEQTRWVPVVIGFKWR*
Ga0097621_1013108561	3300006237	Miscanthus Rhizosphere	QPVDPNIWSATANLTFDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGWTGGAGLGVPIGNTSLFVESRYTTAYTQGEETRWVPVIIGLKWR*
Ga0075433_100792154	3300006852	Populus Rhizosphere	AQPDDPNIWSATANLTLDLMKFGAERRGALYLVGGGGVYRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGKASLFVESRYTTAYTEGEETRWIPVVIGLKWR*
Ga0079217_101645732	3300006876	Agricultural Soil	DDPNIWSATANATLDLIRWGENRRGSLYLVGGGGVFRFTDFYNFDRSDNENDSAFEGEPVTKGGLTGGAGLAFPIGGTSFFVESRYTTAYTEGENTKWVPIVIGLKWR*
Ga0068865_1014072832	3300006881	Miscanthus Rhizosphere	LTLDLFKFGQERRGSLYLLGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFLESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0075419_101410301	3300006969	Populus Rhizosphere	PNIWSATANLTLDLMKFGAERRGALYLVGGGGVYRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGKASLFVESRYTTAYTEGEETRWIPVVIGLKWR*
Ga0079218_101420493	3300007004	Agricultural Soil	SYSRLNGRDDLGAAVQPDDPNIWSATANATLDLFRFGDSQRGALYLVGGGGVFRFTDFFNTDRSDNEPESAFEGDPVTKAGLTGGAGLAFPIGGASLFVESRYTNAFTDGENTRWVPVVIGLKWR*
Ga0079218_110177721	3300007004	Agricultural Soil	QPDDPNIWSATANATLDLIRWGENRRGSLYLVAGGGVFRFTDFYNFDRSDNENDSAFEGEPVTKGGLTGGAGLAFPIGGTSFFVESRYTTAYTEGENTKWVPIVIGLKWR*
Ga0105240_110716692	3300009093	Corn Rhizosphere	LGFRIDVGYSRFNGRVAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0105245_103814811	3300009098	Miscanthus Rhizosphere	PNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0105243_107340732	3300009148	Miscanthus Rhizosphere	GYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0105241_114023102	3300009174	Corn Rhizosphere	EVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0105248_110563401	3300009177	Switchgrass Rhizosphere	GLLTQPVDPNIWSATANLTFDLVNFGQERRGSVYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGMPTTKGGWTGGAGLGVPIGNTSLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0105249_121761901	3300009553	Switchgrass Rhizosphere	RFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0126305_103584102	3300010036	Serpentine Soil	WQSQNSILGFRIDLGYSRFNGREAGTNGLTSQPDDPSIWSGAANLTLDLLRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNDATSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTQGDDTRWVPIVVGLKWR*
Ga0126304_101597901	3300010037	Serpentine Soil	NIWSATANATLDLLRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFQGDPVTKAGLTGGAGLAFPIGGSSLFVESRYTSAYTEGENTKWVPVVIGLKWR*
Ga0126311_117170472	3300010045	Serpentine Soil	DDPNIWSATANATLDLLRFGESRRGALYLVGGGGAFRFTDFYNFDRSDNDPESAFQGDPVTKAGLTGGAGLAFPIGGSSLFVESRYTSAYTEGENTKWVPVVIGLKWR*
Ga0126383_105010852	3300010398	Tropical Forest Soil	MDLGYSRFNGRDAGTNGLLAQPVDPNIWSATANLTLDLMKFGQERRGALYLVGGGGVYRFTNFYDTNRNSNDFTSAFEGTPTTKGGVTGGAGLSLPIGGSSLFVESRYTTAYTQGEETRWVPVIIGLKWR*
Ga0134121_112919892	3300010401	Terrestrial Soil	FQPDDPNIWSGTANLTLDVIRWGESRRGALYLVGGGGVYRFTNFFSGDRNDNEVQSAFQGKPTTRGGVTGGAGLSVPVGGASLFVESRYTNAYTQGEETKWIPVIVGLKWR*
Ga0126317_102773051	3300011332	Soil	LGFRIDLGYSRFNGREAGTNGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGLYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0150985_1088146882	3300012212	Avena Fatua Rhizosphere	TNGLTSQPDDPSIWSGTANLTLDLARWGENRRGSLYLVGGGGAYRFTDFFNSDRSDNDLTSPFTGDPVTKAGLTGGAGLAFPIGGSSVFVESRYTNVYTEGDDTRWVPIVLGLKWR*
Ga0150985_1134905091	3300012212	Avena Fatua Rhizosphere	LGFRIDLGYSRFNGREAGTNGLTSQPDDPSIWSGTANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNDLTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPIVVGLKWR*
Ga0150985_1138710961	3300012212	Avena Fatua Rhizosphere	GVYRFTNFFSGNSTGQDLGDVVQSAFEGSPVTKGGLTGGAGLSFPIGGASLFVESRYTTVYTQGDNTRWVPVIVGFKFR*
Ga0150984_1042680931	3300012469	Avena Fatua Rhizosphere	DLLKYGESRRGALYLVGGGGVYRFTNFFSGNSTGTNATDVVQSAFEGSPVTKGGLTGGAGLSFPIGGSSLFVESRYTTVYTQGDNTRWVPVIVGLKWR*
Ga0157330_10029422	3300012514	Soil	GFNVEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0164303_112263641	3300012957	Soil	MKFGQERRGALYLVGGGGVFRFTDFMSTDRSATDVSSAFQGSPVTKGGLTGGAGLSLPVGGASLIVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0164302_103131352	3300012961	Soil	PLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQERRGALYLVGGGGVFRFTDFMSTDRSDNDVSSAFQGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0164305_109566952	3300012989	Soil	GYSRFNGREAGTNGLTAQPDDPNIWSATANLTLDLMRFGAERRGAFYLVGGGGVFRFTDFFNTDRSDNDVASAFQGSPVTKAGLTGGAGLAFPIGSTSLFVESRYTTAYTEGEQTRWVPVVVGLKWR*
Ga0157370_110119271	3300013104	Corn Rhizosphere	QVPIGYQPVSFPLGFRVDLGYSRFNGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR*
Ga0163162_101231904	3300013306	Switchgrass Rhizosphere	DLGYSRLNGRSAGENGLTSQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0157372_116517752	3300013307	Corn Rhizosphere	DDPNIWSATANLTLDLFKFGQERRGSLYLLGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFLESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0157375_103899041	3300013308	Miscanthus Rhizosphere	SQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR*
Ga0157375_104247091	3300013308	Miscanthus Rhizosphere	GFRIDLGYSRFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPIVVGLKWR*
Ga0163163_107215021	3300014325	Switchgrass Rhizosphere	SILGFRIDLGYSRFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR*
Ga0182007_100414063	3300015262	Rhizosphere	AGTNGLLTQPVDPNIWSATANLTFDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR*
Ga0132258_134659161	3300015371	Arabidopsis Rhizosphere	WQPASSPLGFRVDLGYSRLNGRSAGTNGLTSQLDDPSIWSATANLTLDLLKFGENRRGSLYLVGGGGVFRFTDFNNSDASDNNATSAFEGSPVTKGGITGGAGLAFPIGGTSLFVESRYTTAYTQGDNVRWVPVVFGLKWR*
Ga0132256_1020981521	3300015372	Arabidopsis Rhizosphere	IRFGESKRGALYLVGGGGVYRFTNFFSGDRNDNEVQSAFQGKPTTRGGVTGGAGLAVPIGGASVFAESRYTNAYTQGEETKWIPIVFGLKWR*
Ga0132257_1003652013	3300015373	Arabidopsis Rhizosphere	GYQPLSSPLGFRVDLGYSRFNGRDAGTNGLTAQPNDPNIWSATANLTLDLMKFGAERRGALYLVGGGGVFRFTDFYNTDRSDNSVSSAFEGSPVTKGGLRGGAGLALPIGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0132257_1036630111	3300015373	Arabidopsis Rhizosphere	LGYSRLNGRSAGTNGLTSQLDDPSIWSATANLTLDLLKFGENRRGSLYLVGGGGVFRFTDFNNSDASDNNATSAFEGSPVTKGGITGGAGLAFPIGGTSLFVESRYTTAYTQGDNVRWVPVVFGLKWR*
Ga0132255_1001702171	3300015374	Arabidopsis Rhizosphere	KTGFNVEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0132255_1038178881	3300015374	Arabidopsis Rhizosphere	DLGYSRFNGRDAGTNGLTAQPNDPNIWSATANLTLDLMKFGAERRGALYLVGGGGVFRFTDFYNTDRSDNSVSSAFEGSPVTKGGLTGGAGLALPIGAASLFVESRYTTAYTQGEETRWVPVVIGLKWR*
Ga0132255_1063192751	3300015374	Arabidopsis Rhizosphere	QPDDPNIWSATANLTLDLMRFGAEKRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLAFPIGGASLFLESRYTTAYTEGEQTRWVPVVIGFKWR*
Ga0190274_109169062	3300018476	Soil	DLGYSRFNGRSAGENGLSSQPDDPNIWSATMNATLDLLRFGENRRGALYLVGGGGVFRFTDFNNFDSSDNEPESSLKGEPVTKAGLTGGAGLAFPIGGTSLFVESRYTNAYTDGDNVKWVPVVIGFKWR
Ga0197907_106592091	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0206356_103273281	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VSFPLGFRVDLGYSRFNGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR
Ga0126371_132769592	3300021560	Tropical Forest Soil	YKTGFNVEVPIGYQPATSPLGFRVDLGYSRFNGRPAGTNGLLAQPNDPNIWSATANLTLDLVKFGQERRGSLYLVGGGGLYRFTNFYDTNRSSDDFTSAFDGTPTTKGGVTGGAGLALPIGGSSLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207653_102743041	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	EVPIGYQPLSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207642_100284081	3300025899	Miscanthus Rhizosphere	GREAGTNGLLSQPDDPNIWSATANLTLDLLKFGQERRGSLYLVGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKW
Ga0207705_112557661	3300025909	Corn Rhizosphere	DLGYSRFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR
Ga0207654_105662031	3300025911	Corn Rhizosphere	EVPIGYQPVSGPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207707_112570651	3300025912	Corn Rhizosphere	RWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR
Ga0207657_100352351	3300025919	Corn Rhizosphere	NGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207644_107983151	3300025931	Switchgrass Rhizosphere	VEVPIGYQPVSSPLGFRIDLGYSRFNGREAGTNGLLAQPDDPNIWSATANLTLDLLKFGQERRGSLYLVGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVAGASLFVESRYTTAYTQGQETRWVPVVIGLKWH
Ga0207690_111341331	3300025932	Corn Rhizosphere	LGYSRFNGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR
Ga0207690_117862641	3300025932	Corn Rhizosphere	DFYKTGFNVEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207706_105320251	3300025933	Corn Rhizosphere	TNGLLAQPDDPNIWSATANLTLDLFKFGQERRGSLYLLGGGGVFRFTDFYNSDRSDNDFTSAFEGTPVTKGGLQGGAGLALPVGGASLFLESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207661_119877282	3300025944	Corn Rhizosphere	NGRDAGSNGLLAQPADPNIWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR
Ga0207651_120931931	3300025960	Switchgrass Rhizosphere	YSRFNGREAGTSGLTSQPDDPSIWSGAANLTLDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR
Ga0207640_114477421	3300025981	Corn Rhizosphere	ATANLTFDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGWTGGAGLGVPIGNTSLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207658_102330041	3300025986	Switchgrass Rhizosphere	MKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207639_119658471	3300026041	Corn Rhizosphere	IWSATANLTLDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGVTGGAGLAVPIGGSSLFVESRYTSAYTQGEETRWVPVIIGLKWR
Ga0207708_101543021	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ENGLTSQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR
Ga0207702_117464531	3300026078	Corn Rhizosphere	DPNIWSATANLTFDLVKFGQERRGSLYLVGGGGVFRFTNFYDTNRSSNDFTSAFEGTPTTKGGWTGGAGLGVPIGNTSLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0207676_104038671	3300026095	Switchgrass Rhizosphere	PNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR
Ga0207698_115318892	3300026142	Corn Rhizosphere	LDLVRWGENRRGSLYLVGGGGVYRFTDFFNSDRSDNAVTSPFEGDPVTKGGLTGGAGLAFPIGGSSVFVESRYTNVYTAGDDTRWVPVVVGLKWR
Ga0209818_10770401	3300027637	Agricultural Soil	SAQPDDPNIWSATANATLDLIRWGENRRGSLYLVGGGGVFRFTDFYNFDRSDNENDSAFEGEPVTKGGLTGGAGLAFPIGGTSFFVESRYTTAYTEGENTKWVPIVIGLKWR
Ga0209814_102025401	3300027873	Populus Rhizosphere	GLTAQPDDPNIWSATANLTLDLMKFGAERRGALYLVGGGGVYRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGKASLFVESRYTNAFTEGENTRWVPVVIGLKWR
Ga0209486_100820413	3300027886	Agricultural Soil	SYSRLNGRDDLGAAVQPDDPNIWSATANATLDLFRFGDSQRGALYLVGGGGVFRFTDFFNTDRSDNEPESAFEGDPVTKAGLTGGAGLAFPIGGASLFVESRYTNAFTDGENTRWVPVVIGLKWR
Ga0209486_110697481	3300027886	Agricultural Soil	QPDDPNIWSATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFIESRYTTAYTEGENTKWVPVVIGLKWR
Ga0209382_102343523	3300027909	Populus Rhizosphere	GRSPSETGLSAQPDDPNIWSATANATLDLIRWGESRRGALYLVGGGGLFRFTDFYNFDRSDNDPESAFEGDPVTKAGLTGGAGLAFPIGGTSFFVESRYTTADTEGTNTKWVPIVIGLKW
Ga0209382_116308532	3300027909	Populus Rhizosphere	GGLQPDDPSIWSATANATLDLIRFGESRRGALYLVGGGGVYRFTDFYNTDRSDNDPESAFEGNPVTKAGLTGGAGLSFPIGGTSLFVESRYTNAFTEGENTRWVPVVIGLKWR
Ga0209382_117542152	3300027909	Populus Rhizosphere	YKTGFNVEVPIGYQPVSSPLGFRIDLGYSRFNGRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0268266_106445072	3300028379	Switchgrass Rhizosphere	KFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0247821_107282162	3300028596	Soil	LDLGYSRLNGRSAGENGLTSQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR
Ga0314816_10538142	3300031481	Soil	GAQPDDPNIWSATANATLDLIRWGESRRGALYLVGGGGFFRFTDFYNFDRSDNDPESAFKGDPVTKGGLTGGAGLAFPIGRTSFFVESRYTTVDTEGTNTKWVPVVIGLKWR
Ga0314825_1101472	3300031490	Soil	WQPIGSPFGLRLDLAYARLNGREASETGLGAQPDDPNIWSATANATLDLVRWGESRRGALYLVGGGGFFRFTDFYNFDRSDNDPESAFEGDPVTKGGLTGGAGLAFPIGRTSFFVESRYTTVDTEGTNTKWVPVVIGLKWR
Ga0310888_101093653	3300031538	Soil	GRDAGTNGLTAQPDDPNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKW
Ga0307405_112777212	3300031731	Rhizosphere	LGYSRLNGRSAGENGLTSQPDDPNIWSATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFVESRYTTAYTEGENTKWVPVIVGLKWR
Ga0307413_106420971	3300031824	Rhizosphere	NGRSAGENGLTSQPDDPNIWSATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFVESRYTTAYTEGENTKWVPVVIGLKWR
Ga0310907_108469981	3300031847	Soil	PNIWSATANLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0310904_107472402	3300031854	Soil	WQPMNSPFGLRLDLGYSRLNGRSAGENGLTSQPDDPNIWSATANATLDLVRFGESRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLAFPVGGTSLFIESRYTTAYTEGENTKWVPVIVGLKWR
Ga0310885_102549012	3300031943	Soil	NLTLDLMKFGQDRRGALYLVGGGGVFRFTDFFNTDRSDNDVSSAFEGSPVTKGGLTGGAGLALPVGGASLFVESRYTTAYTQGEETRWVPVVIGLKWR
Ga0310884_108362461	3300031944	Soil	PNIWSGTANATLDLVRFGENKRGALYLVGGGGVYRFTDFFNTDRSDNDPESSLEGKPVTKGGVTGGGGLAFPIGRSSLFVESRYTTAFTEGENTKWIPVVIGLKWR
Ga0307409_1002521931	3300031995	Rhizosphere	SATANATLDLVRWGENRRGALYLVGGGGVFRFTDFYNFDRSDNDPESAFEGEPVTKGGLTGGAGLSFPIGGSSLFVESRYTTAYTEGENTKWVPVVIGLKWR
Ga0247830_104883662	3300033551	Soil	LNGRSPSETGLSAQPDDPNIWSATANATLDLIRWGESRRGALYLVGGGGLFRFTDFYNFDRSDNDPESAFEGDPVTKAGLTGGAGLAFPIGGTSFFVESRYTTADTEGTNTKWVPIVIGLKWR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080474

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences