NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080570

Metagenome / Metatranscriptome Family F080570

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080570
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 130 residues
Representative Sequence MLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI
Number of Associated Samples 95
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 17.39 %
% of genes near scaffold ends (potentially truncated) 46.96 %
% of genes from short scaffolds (< 2000 bps) 93.91 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (88.696 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(20.870 % of family members)
Environment Ontology (ENVO) Unclassified
(21.739 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.348 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.41%    β-sheet: 7.64%    Coil/Unstructured: 43.95%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.4.5.12: Restriction endonuclease FokI, N-terminal (recognition) domaind2foka22fok0.57824
e.10.1.1: Prokaryotic type I DNA topoisomerased1i7da_1i7d0.57572
e.10.1.1: Prokaryotic type I DNA topoisomerased1mw9x_1mw90.56225
a.4.5.65: MukF N-terminal domain-liked1t98a11t980.55677
e.10.1.1: Prokaryotic type I DNA topoisomerased1gkub31gku0.55012


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF01339CheB_methylest 3.48
PF00072Response_reg 2.61
PF03466LysR_substrate 2.61
PF01381HTH_3 1.74
PF13414TPR_11 0.87
PF06094GGACT 0.87
PF05199GMC_oxred_C 0.87
PF08281Sigma70_r4_2 0.87
PF12833HTH_18 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG2201Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domainsSignal transduction mechanisms [T] 6.96
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 0.87


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A88.70 %
All OrganismsrootAll Organisms11.30 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10345523Not Available914Open in IMG/M
3300001593|JGI12635J15846_10518299Not Available701Open in IMG/M
3300001593|JGI12635J15846_10540234Not Available683Open in IMG/M
3300002245|JGIcombinedJ26739_101284057Not Available623Open in IMG/M
3300002245|JGIcombinedJ26739_101596102Not Available549Open in IMG/M
3300004092|Ga0062389_101080038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria988Open in IMG/M
3300005356|Ga0070674_101034657Not Available722Open in IMG/M
3300005434|Ga0070709_10309000All Organisms → cellular organisms → Bacteria1157Open in IMG/M
3300005434|Ga0070709_11493027Not Available549Open in IMG/M
3300005440|Ga0070705_100579958Not Available864Open in IMG/M
3300005467|Ga0070706_101013073Not Available766Open in IMG/M
3300005545|Ga0070695_101102028Not Available650Open in IMG/M
3300005718|Ga0068866_11341814Not Available521Open in IMG/M
3300005921|Ga0070766_10175268Not Available1328Open in IMG/M
3300006163|Ga0070715_10215593Not Available984Open in IMG/M
3300006175|Ga0070712_100092703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales2215Open in IMG/M
3300006175|Ga0070712_101575863Not Available574Open in IMG/M
3300006176|Ga0070765_100531034All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1107Open in IMG/M
3300007788|Ga0099795_10151826Not Available949Open in IMG/M
3300009101|Ga0105247_10526266Not Available866Open in IMG/M
3300009148|Ga0105243_12972928Not Available514Open in IMG/M
3300009176|Ga0105242_11451475Not Available715Open in IMG/M
3300009545|Ga0105237_10495772Not Available1228Open in IMG/M
3300009545|Ga0105237_10880709Not Available902Open in IMG/M
3300010373|Ga0134128_10401242Not Available1531Open in IMG/M
3300010375|Ga0105239_10592524Not Available1264Open in IMG/M
3300010396|Ga0134126_10694890Not Available1156Open in IMG/M
3300010397|Ga0134124_11103681Not Available810Open in IMG/M
3300010865|Ga0126346_1429509Not Available565Open in IMG/M
3300011120|Ga0150983_11679007Not Available976Open in IMG/M
3300011120|Ga0150983_15416848Not Available501Open in IMG/M
3300012361|Ga0137360_10750807Not Available839Open in IMG/M
3300012361|Ga0137360_10903534Not Available761Open in IMG/M
3300012362|Ga0137361_10535502Not Available1075Open in IMG/M
3300012582|Ga0137358_10310554Not Available1070Open in IMG/M
3300012922|Ga0137394_11373256Not Available568Open in IMG/M
3300012923|Ga0137359_11120094Not Available673Open in IMG/M
3300012927|Ga0137416_10608245Not Available953Open in IMG/M
3300012957|Ga0164303_10829210Not Available639Open in IMG/M
3300012984|Ga0164309_10855802Not Available737Open in IMG/M
3300012989|Ga0164305_10925582Not Available735Open in IMG/M
3300013297|Ga0157378_10121578All Organisms → cellular organisms → Bacteria2407Open in IMG/M
3300013297|Ga0157378_11498720Not Available719Open in IMG/M
3300013306|Ga0163162_10296008All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1750Open in IMG/M
3300014968|Ga0157379_11526525Not Available650Open in IMG/M
3300015242|Ga0137412_10609395Not Available826Open in IMG/M
3300015264|Ga0137403_11118845Not Available634Open in IMG/M
3300020062|Ga0193724_1065119Not Available764Open in IMG/M
3300020579|Ga0210407_10230013Not Available1443Open in IMG/M
3300020583|Ga0210401_11142996Not Available637Open in IMG/M
3300021168|Ga0210406_10845728Not Available693Open in IMG/M
3300021171|Ga0210405_10702653Not Available781Open in IMG/M
3300021171|Ga0210405_10865141Not Available689Open in IMG/M
3300021178|Ga0210408_10393016All Organisms → cellular organisms → Bacteria → Proteobacteria1105Open in IMG/M
3300021178|Ga0210408_10546521Not Available919Open in IMG/M
3300021180|Ga0210396_10489375Not Available1077Open in IMG/M
3300021180|Ga0210396_11371883Not Available586Open in IMG/M
3300021402|Ga0210385_11551448Not Available506Open in IMG/M
3300021420|Ga0210394_10197616All Organisms → cellular organisms → Bacteria1754Open in IMG/M
3300021432|Ga0210384_10605981Not Available984Open in IMG/M
3300021479|Ga0210410_10806241Not Available824Open in IMG/M
3300022507|Ga0222729_1045572Not Available595Open in IMG/M
3300022527|Ga0242664_1156090Not Available507Open in IMG/M
3300022724|Ga0242665_10345680Not Available531Open in IMG/M
3300022726|Ga0242654_10040321Not Available1272Open in IMG/M
3300025898|Ga0207692_10247311Not Available1067Open in IMG/M
3300025905|Ga0207685_10414612Not Available693Open in IMG/M
3300025906|Ga0207699_10073618All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium2096Open in IMG/M
3300025914|Ga0207671_11276164Not Available572Open in IMG/M
3300025915|Ga0207693_10979994Not Available646Open in IMG/M
3300025916|Ga0207663_10892025Not Available711Open in IMG/M
3300025916|Ga0207663_10913948Not Available702Open in IMG/M
3300025939|Ga0207665_10333821All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1141Open in IMG/M
3300026555|Ga0179593_1084933Not Available2534Open in IMG/M
3300026557|Ga0179587_11075120Not Available530Open in IMG/M
3300027439|Ga0209332_1030087Not Available1026Open in IMG/M
3300027439|Ga0209332_1043351Not Available835Open in IMG/M
3300027605|Ga0209329_1007830Not Available1968Open in IMG/M
3300027635|Ga0209625_1015291Not Available1689Open in IMG/M
3300027652|Ga0209007_1125470Not Available642Open in IMG/M
3300027667|Ga0209009_1022781All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1528Open in IMG/M
3300027674|Ga0209118_1145223Not Available656Open in IMG/M
3300027692|Ga0209530_1212263Not Available532Open in IMG/M
3300027884|Ga0209275_10731015Not Available570Open in IMG/M
3300027889|Ga0209380_10138838Not Available1417Open in IMG/M
3300028780|Ga0302225_10510795Not Available560Open in IMG/M
3300028798|Ga0302222_10025144Not Available2438Open in IMG/M
3300028906|Ga0308309_11441830Not Available589Open in IMG/M
3300028906|Ga0308309_11651349Not Available545Open in IMG/M
3300029636|Ga0222749_10249534Not Available903Open in IMG/M
3300029943|Ga0311340_10440653All Organisms → cellular organisms → Bacteria → Proteobacteria1183Open in IMG/M
3300029999|Ga0311339_10291431Not Available1763Open in IMG/M
3300029999|Ga0311339_11897610Not Available514Open in IMG/M
3300030007|Ga0311338_10651153Not Available1074Open in IMG/M
3300030007|Ga0311338_11427818Not Available642Open in IMG/M
3300030053|Ga0302177_10324569Not Available817Open in IMG/M
3300030054|Ga0302182_10449606Not Available537Open in IMG/M
3300030057|Ga0302176_10029464Not Available2086Open in IMG/M
3300030057|Ga0302176_10308864Not Available636Open in IMG/M
3300030057|Ga0302176_10453897Not Available517Open in IMG/M
3300030058|Ga0302179_10000917All Organisms → cellular organisms → Bacteria18535Open in IMG/M
3300030399|Ga0311353_10541632Not Available1026Open in IMG/M
3300030617|Ga0311356_11856248Not Available536Open in IMG/M
3300030624|Ga0210251_10372367Not Available503Open in IMG/M
3300030738|Ga0265462_12569146Not Available509Open in IMG/M
3300030741|Ga0265459_14296357Not Available500Open in IMG/M
3300030743|Ga0265461_11879843Not Available675Open in IMG/M
3300030997|Ga0073997_11767008Not Available517Open in IMG/M
3300031049|Ga0074036_10726897Not Available569Open in IMG/M
3300031057|Ga0170834_105075766Not Available517Open in IMG/M
3300031233|Ga0302307_10415056Not Available684Open in IMG/M
3300031234|Ga0302325_11124053Not Available1055Open in IMG/M
3300032180|Ga0307471_102346237Not Available674Open in IMG/M
3300032756|Ga0315742_10520877Not Available1006Open in IMG/M
3300032756|Ga0315742_13104407Not Available535Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil20.87%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa14.78%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil13.04%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere13.04%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.43%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.48%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.61%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.74%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.87%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.87%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010865Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022527Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027439Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027635Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027692Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030054Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1EnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030624Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR005SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300030997Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031049Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral C2 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031233Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1034552313300001593Forest SoilVRYSMLWHSEQKLSALQRWILVKAYSEIVEAGSNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQKNDYGHKWLVIDNATAGAEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKVLSAKMAGRT*
JGI12635J15846_1051829923300001593Forest SoilMPGYEDNLSRLQRWILNKAYGGIIEAGSDEPQEYRRADARPPVHLLRIEVLQHYFKIPLRTQKNDYGHKWLVIDNLTAGPKKANAARTSLSRSLKRLRIRGLISDSITLTPRGIDVAKRAFSPIRRNG*
JGI12635J15846_1054023413300001593Forest SoilMLWHSEHKLSTLQRWILIKAYAEIVEAGSSEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGXEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI*
JGIcombinedJ26739_10128405713300002245Forest SoilMLGYEGNLSQLQRWILDKAYCGIIEAGSDEPQEYRRVDSLPPVHLLRIEVLRDYFGIPLRTQKNDYGHKWLVIDNLTAGPKRANAARTSLSRSLKRLRIRGLISDSITLTPRGIDVAKRAFSRIRWNGY
JGIcombinedJ26739_10159610213300002245Forest SoilYSMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI*
Ga0062389_10108003823300004092Bog Forest SoilWILVEAYCEIIKAGSNEPTKYRRINCLPPVHLLRIFVLRDYFKIPLRTQRNDYGHKWLVIDNSTVGREKANAARTSLSRSLRRLKERGLISDSIKLTPRGIDVAKELSAQSH*
Ga0070674_10103465713300005356Miscanthus RhizosphereVRYSILWHTEHKLSALQRWILIKAYAEIVEAGSDEPKKYRRSGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELS
Ga0070709_1030900013300005434Corn, Switchgrass And Miscanthus RhizosphereVRYSILWHSEQKLSALQRWILIKAYAEIVESGSNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLISDS
Ga0070709_1149302713300005434Corn, Switchgrass And Miscanthus RhizosphereMLWHSEHKLSALQRWILIKAYAEIVEAGSNEPKKYRRSGYLPPVHLLRINVLREYFDIPLRTQRNDYGHKWLVIDNATVGSEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELS
Ga0070705_10057995813300005440Corn, Switchgrass And Miscanthus RhizosphereMLWHSVEKLSRLQRWILIEAYCEILDAGSNEPRKYRRGSDLPAVHLLRIYILRDYFSIPLRTQRNDYGHKWLVIDRTTVGAEKANAARTSLSRSLRRLKQRGLISDSIRLTLRGIDVANGLWTRSRL*
Ga0070706_10101307323300005467Corn, Switchgrass And Miscanthus RhizosphereMLWHSEHKLSTLQRWILIKAYAEIVESGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLISDSIRLTLRGID
Ga0070695_10110202813300005545Corn, Switchgrass And Miscanthus RhizosphereKLSALQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASSARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI*
Ga0068866_1134181413300005718Miscanthus RhizosphereQSFTVRYSILWHSEQKLSALQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDNATAGPEKASAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRT*
Ga0070766_1017526813300005921SoilMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRAGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI*
Ga0070715_1021559333300006163Corn, Switchgrass And Miscanthus RhizosphereAVRYSMLWHSEHKLSALQRWILIKAYAEIVDAGSNEPKKYRRSGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTIRGIDIAKELSAKMVRRI*
Ga0070712_10009270323300006175Corn, Switchgrass And Miscanthus RhizosphereVRYSILWHSEQKLSALQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI*
Ga0070712_10157586313300006175Corn, Switchgrass And Miscanthus RhizosphereMLWHSVEKLSRLQRWILIEAYCEILDAGSNEPRKYRRGSDLPAVHLLRIYILRDYFSIPLRTQRNDYGHKWLVIDRTTVGAEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDVANGLWTRSRL*
Ga0070765_10053103423300006176SoilMLSYFQQKLSRLQRWILTEAYNEILEMGSEEPRKYRRTSDLPPVHLLRIDILRDYFKLPLRTRRNDYANKWLVVDDAAVQPEKAKAARTSLSRSLRRLKIRGLISDAIRLTPRGIDVAKELAAKSE*
Ga0099795_1015182623300007788Vadose Zone SoilMLWHSEHKLSALQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDNATVGTEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKIVRRT*
Ga0105247_1052626613300009101Switchgrass RhizosphereVRHSILWHSEQKLSALQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRT*
Ga0105243_1297292813300009148Miscanthus RhizosphereDKPASLTNASAVRYSMLWHSEHKLSALQRWILIKAYAEIVEAGSDEPKKYRRSGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI*
Ga0105242_1145147513300009176Miscanthus RhizosphereVRYSILWHTEHKLSALQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLISDSIRLTLR
Ga0105237_1049577213300009545Corn RhizosphereMLWHSKQKLSPLQRWILTEAYSEIVEEGSKKPKKYRRTNRLPAVHLLRIYVLRDYFKIPIRTRRNDYSHKWLVVDQAAIGPGKAQAARTSLSRSLRRLKQRGLISDSIRLTRRGIDVAKELSEIGLKRLSPQEL*
Ga0105237_1088070923300009545Corn RhizosphereVRYSILWHTEHKLSALQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLI
Ga0134128_1040124223300010373Terrestrial SoilVRYSILWHSEQKLSALQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASSARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRT*
Ga0105239_1059252423300010375Corn RhizosphereVRYSILWHTEHKLSALQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKDLSAKLVRRT*
Ga0134126_1069489013300010396Terrestrial SoilMLWHSEHKLSALQRWILIEAYSGIVEAGSDEPREYRRSGFLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASSARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKDLSAKMVRRS*
Ga0134124_1110368113300010397Terrestrial SoilTNPSAVRYSMLRHSEHKLSALQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHPLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKARAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI*
Ga0126346_142950913300010865Boreal Forest SoilMLWHSEHKLSALQRWILIKAYAEIVESGSNEPKNYRRTGHLPPVHLLRINVLRAYFNIPLRTQRNDYGHRWLVIDDAAAGSDKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI*
Ga0150983_1167900733300011120Forest SoilVRYSILWHSEQKLSALQRWILIKAYAEIVESGSNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDNATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRL*
Ga0150983_1541684813300011120Forest SoilMLWFSEEGLSPLQRWILLEAYREIVKAGSNVPTKYRRISCLPPVHLLRIYVLRDYFKIPLRTQRNDYGHKWLVIDNSTVGPEKANAARTSLSRSLKRLKERGLISDSIKLT
Ga0137360_1075080713300012361Vadose Zone SoilNPYAVRYSMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI*
Ga0137360_1090353413300012361Vadose Zone SoilMFGYEENLSRLQRWILNKAYCGIIEAGSDEPQECRRADSLPPVHLLRIEVLQHYFKIPLRTQKNDYGHKWLVIDNLTAGPKKANAARTSLSRSLKRLRKRGLISDSITLTLRGIDIAKRT
Ga0137361_1053550213300012362Vadose Zone SoilMLWHSEQKLSSLQRWILIKAYAEIVESGSNEPKKYRRASYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI*
Ga0137358_1031055423300012582Vadose Zone SoilMLWHSEQKLSSLQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRINVLREYFDISLRTQRNDYGHKWLVIDDATVGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSSKMVRRA*
Ga0137394_1137325613300012922Vadose Zone SoilMLWHSEHKLSALQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLREYFDIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTL
Ga0137359_1112009413300012923Vadose Zone SoilLQRWILIKAYSEIVEAGSDEPKKYRRSGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDNASAGPEKANAARTSLSRSLRRLKERGLISDSIRLTIRGIDIAKELSSKMVRRA*
Ga0137416_1060824513300012927Vadose Zone SoilKAYAEIVESGSSEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI*
Ga0164303_1082921023300012957SoilWHSKQKLSPLQRWILTEAYFEIIEEGSEKPKKYRRTNRLPAVHLLRIYVLRDYFKIPIRTRRNDYSHKWLVVDQAAIGPEKAQAARTSLSRSLRRLKQRGLISDSIRLTQRGIDVAKELSESGLIRLSPQEL*
Ga0164309_1085580213300012984SoilMLWHSEHKLSALQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDNATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSSKMVRRT*
Ga0164305_1092558213300012989SoilWVTMLWHSKQKLSPLQRWILTEAYLEIVEEGSKKPKKYRRTNRLPAVHLLRIYVLRDYFKIPIRTRRNDYSHKWLVVDQAAIGPGKAQAARTSLSRSLRRLKQRGLISDSIRLTQRGIDVAKELSEIGLIRLSPQKL*
Ga0157378_1012157823300013297Miscanthus RhizosphereMLWHSVEKLSRLQRWILIEAYREILDAGSNEPRKYRRGSDLPAVHLLRIYILRDYFSIPLRTQRNDYGHKWLVIDRTTVGAEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDVAKGLWTRSRL*
Ga0157378_1149872013300013297Miscanthus RhizosphereMLWHSEHKLSALQRWILIKAYAEIVEAGSNEPKKYRRSGYLPPVHLLRINVLREYFDIPLRTQRNDYGHKWLVIDNATVGSEKANAARTSLSRSLRRLKERGLISDSIRLTIRGIDIAKELSAKMVRRV*
Ga0163162_1029600833300013306Switchgrass RhizosphereVRYSILWHTEHKLSALQRWILIKAYAAIVESGSSEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRT*
Ga0157379_1152652523300014968Switchgrass RhizosphereLWHSEHKLSALQRWILIKAYAEIVEAGSNEPKKYRRSGYLPPVHLLRINVLREYFDIPLRTQRNDYGHKWLVIDNATVGSEKANAARTSLSRSLRRLKERGLISDSIRLTIRGIDIAKELSAKMVWRI*
Ga0137412_1060939523300015242Vadose Zone SoilMLWHSEEKLSRLQRWILIEAYCEILDSGSNEPKKYRRISDLPAVHVLRIYILRDYFSIPLRTQRNDYGHKWLVIDDATVGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSSKMVRRT*
Ga0137403_1111884513300015264Vadose Zone SoilMLWHSEHKLSALQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLREYFDIPLRTQRNDYGHKWLVIDDATVGHEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKDLSAKMVRRT*
Ga0193724_106511913300020062SoilMLWHSEHKLSALQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLREYFDIPLRTQRNDYGHKWLVIDDATVGPEKANAARTSLSRSLRRLKERGLISDSIRLTIRGIDIAKELSAKMVRRI
Ga0210407_1023001323300020579SoilMLWFSEEGLSPLQRWILLEAYCEIIKAGSNEPTKYRRISCLPPVHLLRIYVLRDYFKIPLRTQRNDYGHKWLVIDNSTVGREKANAARTSLSRSLRRLKERGLISDSIKLTPRGIDVAKELSTKSH
Ga0210401_1114299613300020583SoilMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRSGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGTEKANAARTSLSRSLRRLKERGLISDSIRLTLRGID
Ga0210406_1084572823300021168SoilMLWHSGQKLSALQRWILIKAYSEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGTEKANAARTSLSRSLRRLKERGLISDSIRLTIRGIDIAKELSAKMVRRI
Ga0210405_1070265323300021171SoilMLWHSEEKLSRLQRWILVEAYCEIVEAGSNEPKKYRRIGDLPAVHLLRIYVLRDYFNIPVRTQRNDYGHKWLVIDRATVGVEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDVAKELASKLKRARAS
Ga0210405_1086514113300021171SoilMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI
Ga0210408_1039301613300021178SoilMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRL
Ga0210408_1054652123300021178SoilMLWFSEEGLSPLQRWILLEAYCEIIKAGSNEPTKYRRISCLPPVHLLRIYVLRDYFKIPLRTQRNDFGHKWLVIDNSTVGREKANAARTSLSRSLRRLKERGLISDSIKLTPRGIDVAKELSTKSH
Ga0210396_1048937523300021180SoilMLWFSEEGLSPLQRWILLEAYCEIVKAGSNVPTKYRRISCLPPVHLLRIYVLRDYFKIPLRTQRNDYGHKWLVIDNSTVGPEKANAARTSLSRSLKRLKERGLISDSIKLTARGIDVAKELSAKSR
Ga0210396_1137188313300021180SoilAVRYSMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDNATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRL
Ga0210385_1155144813300021402SoilMLWHSEHKLSTLQRWILVKAYAEIVESGTNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDGATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIQIAKELSAKMVRRT
Ga0210394_1019761623300021420SoilMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGTEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI
Ga0210384_1060598113300021432SoilMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGTEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAK
Ga0210410_1080624113300021479SoilMLWHSEEKLSRLQRWILVEAYCEIVEAGSNEPKKYRRIGDLPAVHLLRIYVLRDYFNIPVRTQRNDYGHKWLVIDRATVGEEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDVAKELASKLKRARARAV
Ga0222729_104557213300022507SoilMLWHSEHKLSTLQRWILIKAYAEIVESGSNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDNATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTL
Ga0242664_115609013300022527SoilMLWFSEEGLSPLQRWILLEAYCEIVKAGSNVPTKYRRISCLPPVHLLRIYVLRDYFKIPLRTQRNDYGHKWLVIDNSTVGREKANAARTSLSRSLRRLKERGLISDSIKLTPRGIDVAKELSTKSH
Ga0242665_1034568013300022724SoilCAVRYSMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRSGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGTDKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRPI
Ga0242654_1004032133300022726SoilLDKSTPLTNPSAVRYSILWHSEQKLSALQRWILIKAYAEIVESGSNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDNSTVGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKDLSAKMVRRL
Ga0207692_1024731113300025898Corn, Switchgrass And Miscanthus RhizosphereMLWHSEHKLSTLQRWILIKAYAEIVESGSSEPKKYRRSGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDNATVGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKDLSAKMVRRT
Ga0207685_1041461213300025905Corn, Switchgrass And Miscanthus RhizosphereMLWHSEHKLSTLQRWILIKAYAEIVESGSNEPKKYRRSGYLPPVHLLRINVLREYFDIPLRTQRNDYGHKWLVIDNATVGSEKANAARTSLSRSLRRLKERGLISDSIRLTIRGIDIAKELSAKMVRRI
Ga0207699_1007361813300025906Corn, Switchgrass And Miscanthus RhizosphereMLWHSEHKLSALQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI
Ga0207671_1127616413300025914Corn RhizosphereVAQKRMLEQIVAIPAGRDSILWHSEKKLSALQRWILIEAYSKIVEEGSDEPKKYRRTSYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDRTTVGAEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDVAKGLWTRSRL
Ga0207693_1097999423300025915Corn, Switchgrass And Miscanthus RhizosphereMLWHSEQKLSSLQRWILVEAYSNIIASGSAEPKKYRRTGCRAPVHLLRIYVLRHYFNIPLRTQRNDYGHKWLVIDHETAGAEKANAARTSLSRSLRRLKGRGLISDSISLTARGIDVAKAFSRIKLKRRSNANGWHVAGVVL
Ga0207663_1089202523300025916Corn, Switchgrass And Miscanthus RhizosphereMLWHSVEKLSRLQRWILIEAYREILDAGSNEPRKYRRGSDLPAVHLLRIYILRDYFSIPLRTQRNDYGHKWLVIDRTTVGAEKANAARTSLSRSLRRLKQRGLISDSIRLTLRGIDVAKGLSTRSRL
Ga0207663_1091394813300025916Corn, Switchgrass And Miscanthus RhizosphereMLWHSEHKLSTLQRWILIKAYAEIVESGSSEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDNATVGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRR
Ga0207665_1033382113300025939Corn, Switchgrass And Miscanthus RhizosphereMLWHSEQKLSALQRWILIKAYAEIVEAGSSEPKKYRRSGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKASAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRT
Ga0179593_108493313300026555Vadose Zone SoilMLWHSEEKLSRLQRWILIEAYCEILDSGSNEPKKYRRISDLPAVHLLRIYILRDYFSIPLRTQRNDYGHKWLVIDRTTVGAEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDVAKGLSTRSRL
Ga0179587_1107512013300026557Vadose Zone SoilMLWHSEQKLSSLQRWILIKAYSEIVEAGSDEPKKYRRSGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATVGPEKANAARTSLSRSLRRLKERRLISDSIRLTLRGIDIAKELSAKMVRRI
Ga0209332_103008713300027439Forest SoilMLWHSEHKLSTLQRWILIKAYAEIVESGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDNATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIGIAKELSAKMVRRL
Ga0209332_104335113300027439Forest SoilMPGYEDNISQLQRWILNKAYCGIMEAGSDEPQEYRRADSLPPVHLLRIEVLRDYFGIPLRTQNNDYGHKWLVIDNLTAGQKRANAARTSLSRSLKRLRIRGLISDSITLTPRGIDVAKRAFSQIRWNG
Ga0209329_100783013300027605Forest SoilMLWHSGQKLSALQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGTEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI
Ga0209625_101529123300027635Forest SoilMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMARQL
Ga0209007_112547013300027652Forest SoilMLWHSEHKLSALQRCILVKAYAEIIESGTNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDAATVGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKVLSAKMAGRT
Ga0209009_102278123300027667Forest SoilMLWHSERKLSTLQRWILIKAYAEIVEAGSNEPNKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDNATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI
Ga0209118_114522313300027674Forest SoilMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRLTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDNATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLQGIDIAKELSAKMVRRI
Ga0209530_121226313300027692Forest SoilMIWHSEQKLSALQRWILIKAYAEIVESGSNEPKKYRRTGYLPPVHLLRIQVLREYFDIPLRTQRNDYGHKWLVIDNATAGTEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIQIAKELSAKMVRRI
Ga0209275_1073101513300027884SoilAGILFMLWFSEEGLSPLQRWILLEAYCEIIKAGSNEPTKYRRISCLPPVHLLRIYVLRDYFKIPLRTQRNDFGHKWLVIDNSTVGREKANAARTSLSRSLRRLKERGLISDSIKLTPRGIDVAKELSTKSH
Ga0209380_1013883823300027889SoilMLWHSEHKLSTLQRWILIKAYAEIVEAGSSEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI
Ga0302225_1051079513300028780PalsaYSMHWHSEQKLSALQRWILIKAYAEIVESGSNEPKIYRRTGYLPPVHLLRVNVLQDYFNIPLRTKRNDYRHKWLVIDYATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVTPALNGTRLGSP
Ga0302222_1002514423300028798PalsaMIPMLCHFEEKLSRLQRWILVEAYCEIIEAGSCEPRKYRRTSYLPAVHLLRIYVLRDYFNIPLRTQRNDFGHKWLVIDDAAVGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDVAKELSAK
Ga0308309_1144183013300028906SoilMLWFSEEGLSPLQRWILLEAYCEIIKAGSNEPTKYRRISCLPPVHLLRIYVLRDYFKIPLRTQRNDFGHKWLVIDNSTVGREKANAARTSLSRSLRRLKERGLISDSIKLTPRGIDVAK
Ga0308309_1165134923300028906SoilMLSYFQQKLSRLQRWILTEAYNEILEIGSEEPRKYRRTSDLPPVHLLRIDILRDYFKLPLRTRRNDYAHKWLVVDDAAVQPEKAKAARTSLSRSLRRLKIRGLISD
Ga0222749_1024953423300029636SoilLDKSTPLTNPSAVRYSILWHSEQKLSALQRWILIKAYAEIVESGSNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDDATAGAEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI
Ga0311340_1044065313300029943PalsaMHWHSEQKLSALQRWILIKAYAEIVESGSNEPKIYRRTGYLPPVHLLRVNVLQDYFNIPLRTKRNDYRHKWLVIDYATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVTPALNGTRLGSPLRGETE
Ga0311339_1029143143300029999PalsaMLWHSEHKLSALQRWILVKAYSEIVEAGSDEPKKYRRTGYLPPVHLLRINVLRDYFDIPLRTQSNDYGHRWLVIDNATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDLAKVLSAKMVRRT
Ga0311339_1189761023300029999PalsaMLRRSEQKLSALQRWILIKAYAEIVESGSNEPNKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDNATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTFRGILIAK
Ga0311338_1065115313300030007PalsaMHWHSEQKLSALQRWILIKAYAEIVESGSNEPKIYRRTGYLPPVHLLRVNVLQDYFNIPLRTKRNDYRHKWLVIDYATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVTPALNGTRLGSP
Ga0311338_1142781813300030007PalsaMLWHSEQKLSALQRWILIKAYSEIVESGSNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQKNDYGHKWLVIDNATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTHRGIDIAKVLSAKMAGRPV
Ga0302177_1032456913300030053PalsaKTFCNCRNYHRRVTRLTNRHQLANHSAMRYSMHWHSEQKLSALQRWILIKAYAEIVESGSNEPKIYRRTGYLPPVHLLRVNVLQDYFNIPLRTKRNDYRHKWLVIDYATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVTPALNGTRLGSP
Ga0302182_1044960613300030054PalsaKSDKFDIPASLTDSLRVRHSMLRRSEQKLSALQRWILIKAYAEIVESGSNEPKIYRRTGYLPPVHLLRVNVLQDYFNIPLRTKRNDYRHKWLVIDYATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVTPALNGTRLGSPLRGETE
Ga0302176_1002946413300030057PalsaLTNPSEVRYSMLWHSEHKLSALQRWILVKAYSEIVEAGSDEPKKYRRTGYLPPVHLLRINVLRDYFDIPLRTQSNDYGHRWLVIDNATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDVAKELSAK
Ga0302176_1030886413300030057PalsaMRYSMHWHSEQKLSALQRWILIKAYAEIVESGSNEPKIYRRTGYLPPVHLLRVNVLQDYFNIPLRTKRNDYRHKWLVIDYATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVTPALNGTRLGSP
Ga0302176_1045389723300030057PalsaRWILIKAYSEIVESGSNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQKNDYGHKWLVIDNATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTHRGIDIAKVLSAKMAGRPV
Ga0302179_1000091763300030058PalsaMLCHFEEKLSRLQRWILVEAYCEIIEAGSCEPRKYRRTSYLPAVHLLRIYVLRDYFNIPLRTQRNDFGHKWLVIDDAAVGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDVAKELSAK
Ga0311353_1054163213300030399PalsaMHWHSEQKLSALQRWILIKAYAEIVESGSNEPKIYRRTGYLPPVHLLRVNVLQDYFNIPLRTKRNDYRHKWLVIDYATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVTREKKCAAFLGCWGDNGAENRLKV
Ga0311356_1185624813300030617PalsaLANHSAMRYSMHWHSEQKLSALQRWILIKAYAEIVESGSNEPKIYRRTGYLPPVHLLRVNVLQDYFNIPLRTKRNDYRHKWLVIDYATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVKREKKCAAFLGC
Ga0210251_1037236713300030624SoilWILIETYSEIVEAGSDQPNKYRRTSRLPPVHLLRIHILRDYFKIPLRTQKSDYAHKWLVIDDAGVEPEKAKAARTSLSRSLRRLKVRGLISDSIRLTPQGIDVARELSAQSG
Ga0265462_1256914613300030738SoilLKQKLSRLQRWILIETYSEIVEAGSDQPNKYRRTSRLPPVHLLRIHILRDYFKIPLRTQKSDYAHKWLVIDDAGVEPEKAKAARTSLSRSLRRLKVRGLISDSIRLTPQGIDVARELSAQSG
Ga0265459_1429635713300030741SoilYLKQKLSRLQRWILIETYSEIVEAGSDQPNKYRRTSRLPPVHLLRIHILRDYFKIPLRTQKSDYAHKWLVIDDAGVEPEKAKAARTSLSRSLRRLKVRGLISDSIRLTPQGIDVARELSAQSG
Ga0265461_1187984313300030743SoilMLWIPEEKLSPLQRWILIEAYGEIIEAGSDEPKKYRRISYLPPVHLLRIYVLRDYFKIPLRTQRNDYGHKWLVMDKAAVGPEKANAARTSLSRSLRRLKERGLISDSISLTSRGIEVAKELSAKSH
Ga0073997_1176700813300030997SoilYKFDKPTSLTNPYAVRYSMLWHSEHKLSTLQRWILIKAYAEIVEAGSNEPKKYRRTGYLPPVHLLRINVLRDYFNIPLRTQRNDYGHKWLVIDDATAGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRI
Ga0074036_1072689713300031049SoilANVLNFIRQDEIAVVKSATSLTNSSAVRYSMLWHSEQKLSALQRWILIEAYSKIVEAGSDEPEKYRRTSYLPPVHLLRSNVLQDYFNIPLRTQRNDYGHKWLVIDNATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIGIAKELSAKMVRRL
Ga0170834_10507576613300031057Forest SoilVLLYGAAMLGYEENLSRLQRWILNKAYCGIIEAGSDEPQECRRADCLPPVHLLRIEVLQHYFKIPLRTQKNDYGHKWLVIDNLTAGPKKANAARTSLSRSLKRLRIRGLISDSITLTPRGIDVAKRASRQIRRNGY
Ga0302307_1041505613300031233PalsaMRYSMHWHSEQKLSALQRWILIKAYAEIVESGSNEPKIYRRTGYLPPVHLLRVNVLQDYFNIPLRTKRNDYRHKWLVIDYATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVTPALNGTRLGSPLRGETE
Ga0302325_1112405323300031234PalsaLSALQRWILIKAYAEIVESGSNEPKIYRRTGYLPPVHLLRVNVLQDYFNIPLRTKRNDYRHKWLVIDYATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVTPALNGTRLGSP
Ga0307471_10234623713300032180Hardwood Forest SoilPSAVRYSILWHTEHKLSALQRWILIKAYAEIVESGSNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQRNDYGHKWLVIDNATVGPEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSTKMVRRT
Ga0315742_1052087723300032756Forest SoilHIPANVLNFIRQDEIAVVKSATSLTNSSAVRYSMLWHSEQKLSALQRWILIEAYSKIVEAGSDEPEKYRRTSYLPPVHLLRSNVLQDYFNIPLRTQRNDYGHKWLVIDNATAGPERANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKELSAKMVRRL
Ga0315742_1310440713300032756Forest SoilALQRWILVKAYSEIVEAGSNEPKKYRRTGYLPPVHLLRIKVLRDYFNIPLRTQKNDYGHKWLVIDNATAGAEKANAARTSLSRSLRRLKERGLISDSIRLTLRGIDIAKVLSAKMAGRT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.