Metagenome / Metatranscriptome Family F080666

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080666
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	76 residues
Representative Sequence	DDVTVLLVRSSGRKLRFSLAEKLGALMRFSRLLIGALNPRAERPPLPDANLANIGGAIIPALGRRWRARG
Number of Associated Samples	104
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	89.57 %
% of genes from short scaffolds (< 2000 bps)	88.70 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.870 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere (6.087 % of family members)
Environment Ontology (ENVO)	Unclassified (36.522 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.130 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.76% β-sheet: 0.00% Coil/Unstructured: 62.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13193	AMP-binding_C	17.39
PF01070	FMN_dh	11.30
PF07992	Pyr_redox_2	9.57
PF00581	Rhodanese	1.74
PF03551	PadR	1.74
PF13466	STAS_2	1.74
PF07592	DDE_Tnp_ISAZ013	1.74
PF12543	DUF3738	1.74
PF00484	Pro_CA	1.74
PF00753	Lactamase_B	1.74
PF00107	ADH_zinc_N	0.87
PF03681	Obsolete Pfam Family	0.87
PF01596	Methyltransf_3	0.87
PF07228	SpoIIE	0.87
PF01042	Ribonuc_L-PSP	0.87
PF01738	DLH	0.87
PF15919	HicB_lk_antitox	0.87
PF08521	2CSK_N	0.87
PF13360	PQQ_2	0.87
PF00589	Phage_integrase	0.87
PF13313	DUF4082	0.87
PF01161	PBP	0.87
PF02687	FtsX	0.87
PF07927	HicA_toxin	0.87
PF00326	Peptidase_S9	0.87
PF07732	Cu-oxidase_3	0.87
PF00710	Asparaginase	0.87
PF00926	DHBP_synthase	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	11.30
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	11.30
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	1.74
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	1.74
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.74
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.74
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.74
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	0.87
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.87
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.87
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.87
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.87
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.87
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.87
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.87 %
Unclassified	root	N/A	19.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.87 %
Unclassified	root	N/A	19.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.87 %
Unclassified	root	N/A	19.13 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.96 %
Unclassified	root	N/A	19.13 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.61 %
Unclassified	root	N/A	19.13 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.09 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.87 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	20.00 %
Unclassified	root	N/A	19.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.22 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.61 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.87 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.13 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	14.78 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	5.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.22 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.61 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.87 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.13 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	14.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.22 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	3.48 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.74 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.87 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.87 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.13 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	14.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.22 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.61 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	1.74 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.87 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.87 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.13 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	14.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.22 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1.74 %
Granulicella sp. L46	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	0.87 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.87 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.87 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10366596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	505	Open in IMG/M
3300001526\|A105W1_1393901	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300004080\|Ga0062385_10703572	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300004091\|Ga0062387_101687337	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300004479\|Ga0062595_101795355	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300004635\|Ga0062388_100315917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1312	Open in IMG/M
3300005334\|Ga0068869_101187869	Not Available	670	Open in IMG/M
3300005340\|Ga0070689_100856171	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	802	Open in IMG/M
3300005367\|Ga0070667_101256720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	693	Open in IMG/M
3300005437\|Ga0070710_10235737	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300005439\|Ga0070711_100378516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1144	Open in IMG/M
3300005459\|Ga0068867_100346118	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300005540\|Ga0066697_10035885	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300005548\|Ga0070665_101782774	Not Available	622	Open in IMG/M
3300005558\|Ga0066698_10468878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300005602\|Ga0070762_11183527	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005614\|Ga0068856_101806037	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300005842\|Ga0068858_100039986	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4348	Open in IMG/M
3300006047\|Ga0075024_100362540	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300006047\|Ga0075024_100640689	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300006172\|Ga0075018_10205262	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300006176\|Ga0070765_101767443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	580	Open in IMG/M
3300006237\|Ga0097621_100435292	All Organisms → cellular organisms → Bacteria → Acidobacteria	1179	Open in IMG/M
3300006358\|Ga0068871_100488274	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1109	Open in IMG/M
3300007076\|Ga0075435_100860363	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300009012\|Ga0066710_101190408	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300009093\|Ga0105240_10896039	All Organisms → cellular organisms → Bacteria → Acidobacteria	955	Open in IMG/M
3300009098\|Ga0105245_10405272	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1364	Open in IMG/M
3300009098\|Ga0105245_11872043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	653	Open in IMG/M
3300009148\|Ga0105243_10396857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1280	Open in IMG/M
3300009174\|Ga0105241_10745983	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300009174\|Ga0105241_12255378	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300009525\|Ga0116220_10596322	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300009672\|Ga0116215_1198296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300009759\|Ga0116101_1158703	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300009839\|Ga0116223_10173086	Not Available	1331	Open in IMG/M
3300010375\|Ga0105239_10871099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300010401\|Ga0134121_13138350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	510	Open in IMG/M
3300010880\|Ga0126350_11326114	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300011119\|Ga0105246_10303887	All Organisms → cellular organisms → Bacteria → Acidobacteria	1289	Open in IMG/M
3300011120\|Ga0150983_11225167	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300011120\|Ga0150983_14951901	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300012212\|Ga0150985_114501886	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300012285\|Ga0137370_10143936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1374	Open in IMG/M
3300012351\|Ga0137386_10809081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300012469\|Ga0150984_122505171	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300012923\|Ga0137359_11042515	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300014153\|Ga0181527_1100058	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300014169\|Ga0181531_10434722	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300014501\|Ga0182024_11382578	Not Available	811	Open in IMG/M
3300014501\|Ga0182024_11751252	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	697	Open in IMG/M
3300014968\|Ga0157379_10899918	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300014969\|Ga0157376_10418909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1299	Open in IMG/M
3300015082\|Ga0167662_1049517	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300015373\|Ga0132257_102541009	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300017821\|Ga0187812_1175734	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300017823\|Ga0187818_10507526	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300017970\|Ga0187783_11089479	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300018006\|Ga0187804_10561698	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300019487\|Ga0187893_10235498	Not Available	1364	Open in IMG/M
3300020021\|Ga0193726_1270737	Not Available	676	Open in IMG/M
3300020582\|Ga0210395_10375689	All Organisms → cellular organisms → Bacteria → Acidobacteria	1069	Open in IMG/M
3300021402\|Ga0210385_10204630	Not Available	1436	Open in IMG/M
3300021475\|Ga0210392_10755311	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300024225\|Ga0224572_1107803	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300024227\|Ga0228598_1110545	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	556	Open in IMG/M
3300025900\|Ga0207710_10678138	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300025903\|Ga0207680_10290544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300025908\|Ga0207643_10785986	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	616	Open in IMG/M
3300025908\|Ga0207643_11148263	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300025911\|Ga0207654_11278208	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300025917\|Ga0207660_11374730	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300025927\|Ga0207687_10235950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1447	Open in IMG/M
3300025930\|Ga0207701_11216853	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300025934\|Ga0207686_10042537	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2778	Open in IMG/M
3300025935\|Ga0207709_10292922	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1207	Open in IMG/M
3300025936\|Ga0207670_10637881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	877	Open in IMG/M
3300026035\|Ga0207703_10555858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1082	Open in IMG/M
3300026035\|Ga0207703_11092892	Not Available	766	Open in IMG/M
3300026078\|Ga0207702_11980136	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300027824\|Ga0209040_10537913	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300027857\|Ga0209166_10653398	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300028380\|Ga0268265_12677659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	504	Open in IMG/M
3300028800\|Ga0265338_10927967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300028807\|Ga0307305_10200601	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300028906\|Ga0308309_10265976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1440	Open in IMG/M
3300029990\|Ga0311336_10631626	All Organisms → cellular organisms → Bacteria → Acidobacteria	915	Open in IMG/M
3300030007\|Ga0311338_11199674	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300030007\|Ga0311338_11639595	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300030580\|Ga0311355_11367362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	617	Open in IMG/M
3300031231\|Ga0170824_114201245	Not Available	572	Open in IMG/M
3300031234\|Ga0302325_12838601	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300031235\|Ga0265330_10277264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	706	Open in IMG/M
3300031241\|Ga0265325_10342903	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300031525\|Ga0302326_12024271	Not Available	743	Open in IMG/M
3300031525\|Ga0302326_12832086	Not Available	598	Open in IMG/M
3300031708\|Ga0310686_118185135	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	672	Open in IMG/M
3300031720\|Ga0307469_12291903	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	526	Open in IMG/M
3300031754\|Ga0307475_11182618	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300031962\|Ga0307479_11338752	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300032180\|Ga0307471_103065590	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300032783\|Ga0335079_12163089	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300033004\|Ga0335084_12086098	Not Available	551	Open in IMG/M
3300033412\|Ga0310810_10802009	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300033475\|Ga0310811_10371974	All Organisms → cellular organisms → Bacteria → Acidobacteria	1586	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.35%
Host-Associated	Host-Associated	35.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.17%
Plants	Host-Associated → Plants	35.65%
Aquatic	Environmental → Aquatic	12.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.43%
Freshwater	Environmental → Aquatic → Freshwater	9.57%
Peat	Environmental → Terrestrial → Peat	6.96%
Sediment	Environmental → Aquatic → Sediment	2.61%
Roots	Host-Associated → Plants → Roots	1.74%
Cave	Environmental → Terrestrial → Cave	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.52%
Loam	Environmental → Terrestrial → Soil → Loam	10.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.74%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.87%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.22%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.22%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.35%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.87%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001526	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-5cm-1A)- 1 week illumina	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015082	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11c, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_103665962	3300001356	Peatlands Soil	DNLTEDDVTVLVVRVNGRPAHHSFKAKFGAAIRLIRAMIAAINPKAERPPLPDANLANIGGAIIPALGRRWRAKRF*
A105W1_13939013	3300001526	Permafrost	VLVVRANGREPRYSFGEKLGALVRFFRSLIRAVNPRAERPPLPDANLANIGGAIIPALGRRWRAAGAMRRSS*
Ga0062385_107035721	3300004080	Bog Forest Soil	DKLLTEIEARYPGGLAEDDVTVLAVRANGRKLHFSFAEKLHALGRFLGTLVRSVNSGAERPPLPDANLANIGGAIIPALGRRWRASKS*
Ga0062387_1016873372	3300004091	Bog Forest Soil	RANGRKLHFSFAEKLHALGRFLGTLVRSVNSGAERPPLPDANLANIGGAIIPALGRRWRASKS*
Ga0062595_1017953551	3300004479	Soil	LVVRANGRQPKYAFGDKLRAAASLATSMLRAVNPKAERPPLPDFVLANIGGAVIPALARRWRARSEAGSPAQRQ*
Ga0062388_1003159171	3300004635	Bog Forest Soil	VTVLVMRANGGEGHYSLGEKLAAFARFAGTLIRSVNPRAERAPFPDANLANIGGAIIPALGRRWRAPGAMRRSNPGDTKC*
Ga0068869_1011878691	3300005334	Miscanthus Rhizosphere	DDATVLVLQANGQEPQNSFSDKLGALGRFSRTLIGAIDPSAERPPFPDANLANIGGALIPALGRRWRGAAKPAEDEPS*
Ga0070689_1008561712	3300005340	Switchgrass Rhizosphere	EDDVTVLVVRVNGRPPHHSLGAKFGAAIRLVRSIVAAINPQAERPPLPDANLANIGGAIIPALGRRWRAKRS*
Ga0070667_1012567202	3300005367	Switchgrass Rhizosphere	RHPENLTEDDVTVLVVRVNGRPPHHSLGAKFGAAIRLVRSIVAAINPQAERPPLPDANLANIGGAIIPALGRRWRAKRS*
Ga0070710_102357371	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DRHPDNLSDDDVTVLVVRANGRPPGHSMREKFGAAIRLVLSVIAAINPKAERPPLPDANLANIGGAFIPALGKRWRAKRSLVERSPEV*
Ga0070711_1003785161	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DDVTVLVVRVNGRPAHHPFREKLKALGRFSRSLIAAINPKAERPPLPDANLANIGGAIIPALGRRWRAKKS*
Ga0068867_1003461184	3300005459	Miscanthus Rhizosphere	YPENLSDDDVTVLLVRSSGGPLRFSVREKMGALMRFSRTLISSFNPQAERPPFPDAKLANVGGAIIPALGRRWRARG*
Ga0066697_100358851	3300005540	Soil	PQNLSDDDVTVMLIRASGRPLRFSLAEKLRAAGRLARSLVLAVNPRAERPPLPDLVLANIGGAIIPQLERTWRVRKTPSQGLNRHTTQRE*
Ga0070665_1017827741	3300005548	Switchgrass Rhizosphere	EDDVTVLLVRSNGRPLRVPFREKFAALLRFSKTFIAAINPSAERPPLPDANLANIGGAIIPALGRRWRARV*
Ga0066698_104688782	3300005558	Soil	LIQALLHEITDRYPQNLSDDDVTVMLIRASGRPLRFSLAEKLRAAGRLARSLVLAVNPRAERPPLPDLVLANIGGAIIPQLERTWRVRKTPSQGLNRHTTQRE*
Ga0070761_109605591	3300005591	Soil	VNEHKASYTIREKLAALGRFSGTFFRALNPKAERPPFPDLNLANLGGAIIPALARRWRAKQGEE*
Ga0070762_111835271	3300005602	Soil	NGRQAHYSLGDKLAALLRFSGALVRAINPRAERPPLPDANLANLGGALIPALGRRWRARRSI*
Ga0068856_1018060371	3300005614	Corn Rhizosphere	VTVLLVRSSGRKLRFSLGEQFGALLRFARSVLGALNPRAERPPLPDANLANIGGAIIPALGRRWRARG*
Ga0070764_107629781	3300005712	Soil	VAEVNQRKAHYTFREQLGALRRLTWSVVRAVNPKAERPPLPDLNLANLGGAIIPALGRRWRAKPQD*
Ga0068858_1000399865	3300005842	Switchgrass Rhizosphere	PPHHSFGAKLGAAMRLFRSMLASINPQAERPPLPDANLANIGGAIIPALGRRWRAKKS*
Ga0075024_1003625401	3300006047	Watersheds	LSEDDVTVFLVRTNGRAPRYSLAEKLGAVMRFSGSLLRAIDPRAERPPFPDANLANIGGALIPALGRRWRSVRAASGENFSSK*
Ga0075024_1006406891	3300006047	Watersheds	VRASGRKLRFSFAEKLGALVRFSRTLLGAFNPHAERPQFPDANLANIGGAIIPALGRRWRAGKGL*
Ga0075018_102052621	3300006172	Watersheds	ANGRPLRFSLREKLEALLRFSRTLIGALNPRAERPPFPDAKLANLGGAIIPALGRRWRTRKGPSSP*
Ga0070765_1017674431	3300006176	Soil	RESHYSLAEKAGAFARFVVSLIRSVNPKAERAPFPDANLANIGGAIIPALGQRWRVPGATKPGKQL*
Ga0097621_1004352922	3300006237	Miscanthus Rhizosphere	YPENLSEDDVTVLLVRSSGRKLRFSLAEQLGAFMRFSRSLIGAIKPGAERPPFPDANLANIGGAIIPALGRRWRARG*
Ga0068871_1004882741	3300006358	Miscanthus Rhizosphere	TVLVVRVNGRPPHHPFQAKLGAAIRLIRSVIAAANPKAERPPLPDANLANIGGAIIPALGKRWRAKKSS*
Ga0075435_1008603631	3300007076	Populus Rhizosphere	ERYPENLSAGDVTVLVARANGRKPGYSFKEKLGALGELSRSLIRAINPRAERPPLPDANLANIGGAIIPALARRWRAPAQSAGQSKSS*
Ga0066710_1011904081	3300009012	Grasslands Soil	NLSDDDVTVMLIRASGRPLRFSLAEKLRAAGRLARSLVLAVNPRAERPPLPDLVLANIGGAIIPQLERTWRVRKTPSQGLNRHTTQRE
Ga0105240_108960391	3300009093	Corn Rhizosphere	EIAERYPQNLSDDDVTVLLVRSSGRKLRFSLGEQFGALLRFARSVLGALNPRAERPPLPDANLANIGGAIIPALGRRWRARG*
Ga0105245_104052722	3300009098	Miscanthus Rhizosphere	VTVLVVRVNERPPHHSFGAKLGAAMRLFRSMLASINPQAERPPLPDANLANIGGAIIPALGRRWRAKKS*
Ga0105245_118720431	3300009098	Miscanthus Rhizosphere	RVNGRPPHHPFRAKLGAAMRLIRSIVAAINPKAERPPLPDANLANIGGAIIPALGKRWRAAKKS*
Ga0105243_103968571	3300009148	Miscanthus Rhizosphere	TVLVVRVNGRPPHHSLGAKFGAAIRLIRSLVAAINPSAERPPLPDANLANIGGAIIPALGRRWRAKRS*
Ga0105241_107459831	3300009174	Corn Rhizosphere	AELTGALLREIAERYPQNLSDDDVTVLLVRSSGRKLRFSLGEQFGALLRFARSVLGALNPRAERPPLPDANLANIGGAIIPALGRRWRARG*
Ga0105241_122553781	3300009174	Corn Rhizosphere	DVTVLLVRSSGRKLRFSLAEQLGAFMRFSRSLIGAIKPGAERPPFPDANLANIGGAIIPALGRRWRARG*
Ga0116220_105963222	3300009525	Peatlands Soil	VTVLLVRANGQKPKYSFRERLGAQMRFMGSLIRAINPKAERPPLPDLVLANIGGAIIPALGRRWRAAGHTSQSSS*
Ga0116215_11982962	3300009672	Peatlands Soil	RANGRQPRYSIRQKLGAMSRFFGTAIRAINPRAERPPVPDFSLPNIGGAIIPALGRRWRASKGS*
Ga0116101_11587031	3300009759	Peatland	QTLRYSFSEKMGAVARFFRSLIGAVNPKSERPPFPDLNLANIGGAIIPALGRRWRAARHGSPSSP*
Ga0116223_101730862	3300009839	Peatlands Soil	RYPGGLAEDDVTVLVVRANGRKLNYSFADKLHALGRFMGTLVRAFNPGAERPPLPDAKLANIGGAIIPALGRRWRAAKPQ*
Ga0105239_108710992	3300010375	Corn Rhizosphere	GRPLRVPFREKLAALLRFSKTFVAAINPSAERPPLPDANLANIGGAIIPALGRRWRARQ*
Ga0136449_1042035842	3300010379	Peatlands Soil	NGRKANYTLGEKLGALGRFAGSLLRALHPRAERPPLPDLNLANLGGAIIPALGRRWRAKPR*
Ga0134121_131383501	3300010401	Terrestrial Soil	PKNLSDDDVTVVVVRANGRQPRYSLVQKVKAMLRVGGSLIRSIDPRAERAPLPDANLANIGGAIIPALGRRWRAKRGA*
Ga0126350_113261142	3300010880	Boreal Forest Soil	DNLSDDDVTVLVIRANGGEPHYSLGEKLRAFMRFAGTAIRSLNPRAERAPFPDANLANLGGAIIPALARRWRAKPLPQVPD*
Ga0105246_103038873	3300011119	Miscanthus Rhizosphere	SDDDATVLVLQANGQEPQNSFSDKLGALGRFSRTLIGAIDPSAERPPFPDANLANIGGAIIPALGRRWRARV*
Ga0150983_112251672	3300011120	Forest Soil	EERYPRSLADDDVTVLVVEVNQRKAHFTFREQLGALGRFLLATIRALNPKAERPPFPDLNLANLGGAIIPALGRRWRAKPEVSEPRL*
Ga0150983_149519011	3300011120	Forest Soil	IGRQYSKNLSEDDVTVLVMRANGGESHYSFGEKLGAFARFAGSLIRSVNPRAERAPFPDANLANIGGALIPALGRRWRSQHPI*
Ga0150985_1145018861	3300012212	Avena Fatua Rhizosphere	MIHANARALHYSLGEQLRAVCRFFRLLIAGAINPRAERAPFPDANLANIGGAIIPALGRRWRATRTER*
Ga0137370_101439361	3300012285	Vadose Zone Soil	GEIAQRNPQNLSDDDVTVPVVRANGRVRGYSMADKLHAAIRFAGSLIRAVNPHAERPPFPDLNLANIGGAIIPVLGRRWRASSARRKR*
Ga0137386_108090812	3300012351	Vadose Zone Soil	LLVRANGREPGYSLGEKLGGLLRFSRSLIGAINPRAERPPLPDANLANIGGAIIPALGRRWRAGGATRRSL*
Ga0150984_1225051711	3300012469	Avena Fatua Rhizosphere	RNVIQTLLAAIVERCPENLCDDDVTVVMIHANARALHYSLGEQLRAVCRFFRLLIAGAIYPRAERAPFPDANLANIGGAIIPALGRRWRATRTER*
Ga0137359_110425151	3300012923	Vadose Zone Soil	RANGRPPRYTFVEKLGALVRFSSSLIRAVNHRAERPPFPDANLANIGGAIIPALGRRWRAAGAMRR*
Ga0181527_11000582	3300014153	Bog	RYPKNLSDDDVTVLVARPTGGKMRYTLGEKLRAAGRFSQAWIRSLNPRAERAPFPDLNLANLGGAIIPALGKRWRAKK*
Ga0181518_106139762	3300014156	Bog	LVMRVSGRAAHYSLGEKLGALRRFAGSMIRALRPGTERPPFPDMNLANLGGAIIPALGRRWRAQSRD*
Ga0181531_104347221	3300014169	Bog	TEKLLAEIESRYPGGLAEDDVTVLVVRANGRKFRYSLGEKLRALARFMGTMIRSVNPRAERPPLPDANLANIGGAIIPALGRRWRAKSAR*
Ga0182024_113825782	3300014501	Permafrost	TVLVVRANGRKLRFSLAQKLSALMRLCWSLIRSLNPRAERPPLPDANLANIGGAIIPALARRWRASSTSRRSTS*
Ga0182024_117512522	3300014501	Permafrost	VTVMLVRANGQKPRNSFNEKLRAQMRVVGSVFRAIGPGAERPPLPDLVLANIGGAIIPALGRRWRAVPRKPRSS*
Ga0157379_108999182	3300014968	Switchgrass Rhizosphere	LSDDDVTVLLVRASGRPLCFSLQEKLEALLRFSRTLIGAFNPRAERPPFPDANLANIGGAIIPALGRRWRARS*
Ga0157376_104189091	3300014969	Miscanthus Rhizosphere	HPKNLTDDDVTVLVLRATGRPLHHPFAAKLGAMLRFGRSLLGAINPKAERPPLPDANLANIGGAIIPALGRRWRAKRP*
Ga0167662_10495172	3300015082	Glacier Forefield Soil	LREIAERYPENLSDDDVTVLLVRSSGRPLRFSLKEKLGALLRFSRAAAAAIDPRAERPPLPDANLANLGGAIIPALGRRWRARR*
Ga0132257_1025410091	3300015373	Arabidopsis Rhizosphere	EIAERYPENLSEDDVTVLLVRSSGRKLRFSFSEKLGALMRFSRLLIGALNPRAERPPLPDANLANIGGAIIPALGRRWRARG*
Ga0187812_11757342	3300017821	Freshwater Sediment	IVRALGDLPPDKLTERLLAEIDARYPDGLAEDDVTVLVVRANGRKLRYSFMDKVRATARFTGTLIGSVNPNAERPPFPDANLANIGGAVIPALGRRWRARKS
Ga0187818_105075262	3300017823	Freshwater Sediment	GDLPPDKLTERLLAEIEARYPNGLAEDDVTVLVVRANGRKLRYSFMDKVRATARFTGTLIGSVNPNAERPPFPDANLANIGGAVIPALGRRWRARKS
Ga0187783_110894791	3300017970	Tropical Peatland	DVTVLLVRANGQEPRYSFREKLGAFASFFRSLIRATHPSAERPPFPDLVLANIGGAIIPALGRRWRAARHRSRPSE
Ga0187804_105616981	3300018006	Freshwater Sediment	SEDDVTLLVVRANGREAQVSFGEKLLAMARFLGSLIRAINPRAERPPLPDANLANIGGAIIPALGRRWRRDHSDKTSVQLPSNSRR
Ga0187893_102354981	3300019487	Microbial Mat On Rocks	LSNDDVTVMVLHVNERKPSYSPGEKLKALLRVCGSMIRAVNPRAERPPLPDANLANIGGAIFPALARRWRAGH
Ga0193726_12707372	3300020021	Soil	YPENLSDDDVTVLVVRANGSKAHYSFGEKLRALIRLSRSVVHAIDPRAERPPFPDANLANIGGAIIPALARRWRATGAMRRSP
Ga0210395_103756892	3300020582	Soil	ERLIAEIDARYPDGLAEDDVTVLVVRANGRKIRYSFGEKLRAMARMAGALIRSVHPRAERAPLPDANLANIGGAVIPALGRRWRARKS
Ga0210385_102046301	3300021402	Soil	DARYPDGLAEDDVTVLVVRANGRKIRYSFGEKLRAMARMAGALIRSVHPRAERAPLPDANLANIGGAVIPALGRRWRARKS
Ga0210392_107553111	3300021475	Soil	LIERLLAEIAARYPENLTEDDVTVLLVQVNESKASYTFAEKLEALFRLTGTTIRAVNPRAERPPFPDLKLANLGGAIIPALARRWRAKSGD
Ga0224572_11078032	3300024225	Rhizosphere	TVLVVCANGRQPSYSLKEKISAQMRFLGSLIRAINPRAERPPLPDFSLPNVGGAIIPALGRRWKA
Ga0228598_11105451	3300024227	Rhizosphere	YPRNLTEDDVTVLLVEVNERKASYTLGEKLGALARFTGSLFRALNPKAERPPFPDLNLANLGGAIIPALARRWRAKPGNQASPP
Ga0207710_106781382	3300025900	Switchgrass Rhizosphere	NLSEDDVTVLLVRSNGRPLRFSLKEKLEALLRFSRTLIGAINPRAERAPFPDANLANIGGAIIPALGRRWRARG
Ga0207680_102905441	3300025903	Switchgrass Rhizosphere	RANGRPLRVPFREKLAALLRFSKTFVVAINPSAERPPLPDANLANIGGAIIPALGLRWRARQ
Ga0207643_107859862	3300025908	Miscanthus Rhizosphere	GRPPHHSLGAKFGAAIRLVRSIVAAINPQAERPPLPDANLANIGGAIIPALGRRWRAKRS
Ga0207643_111482632	3300025908	Miscanthus Rhizosphere	EIADRYPENLSGDDVTVLVVRANGRPLRHPFGEKLKALIRFSRSLIGAINPHAERPPLPDANLANIGGAIIPALGRRWRAGAKRSA
Ga0207654_100472283	3300025911	Corn Rhizosphere	HRLIDTLLKEIAGRYPENLSDDDVTVLVVRATGQPPRYSFREKFGALMRLSRFLIGAIHPNAERPPLPDANLANIGGAIIPALGRRWRARRSDL
Ga0207654_112782081	3300025911	Corn Rhizosphere	DVTVLLVRSSGRKLRFSLAEQLGAFMRFSRSLIGAIKPGAERPPFPDANLANIGGAIIPALGRRWRARG
Ga0207660_113747301	3300025917	Corn Rhizosphere	SEDDVTVTLVRANGRPLRVPFREKFAALLRFSKTFIAAINPRAERPALSDANLANIGGAIIPALGRRWRARDAVLKQMR
Ga0207687_102359501	3300025927	Miscanthus Rhizosphere	RHPENLSEDDVTVLVARANGRQPRHSLIEKLGAFGRFLGLVIGSVRPGAERAPLPDANVANIGGAFIPRLGQRWRAR
Ga0207701_112168531	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LLVRANGRKPSYTFGEQLRAAGRFFRALIGAINPRAERPPFPDISLANIGGAIIPALGRRWRAARRSH
Ga0207686_100425371	3300025934	Miscanthus Rhizosphere	LLVRANGRPLRVPFREKLAALLRFSKTFVAAINPRAERPPLPDANLANIGGAIIPALGRRWRVRQ
Ga0207709_102929221	3300025935	Miscanthus Rhizosphere	TVLVVRVNGRPPHHSLGAKFGAAIRLIRSLVAAINPSAERPPLPDANLANIGGAIIPALGRRWRAKRS
Ga0207670_106378812	3300025936	Switchgrass Rhizosphere	LTEDDVTVLVVRVNGRPPHHSLGAKFGAAIRLVRSIVAAINPQAERPPLPDANLANIGGAIIPALGRRWRAKRS
Ga0207703_105558581	3300026035	Switchgrass Rhizosphere	NLTEDDVTVLVVRVNGRPAHHPFGAKLGAAMRVIRSMVAAINPKAERPPLPDANLANIGGAIIPALGRRWRAAKKS
Ga0207703_110928922	3300026035	Switchgrass Rhizosphere	VTVLVVRVNGRPPHHPFQAKLGAAMRLIRSVIAAANPKAERPPLPDANLANIGGAIIPALGKRWRAKKSS
Ga0207702_119801362	3300026078	Corn Rhizosphere	DDVTVLLVRSSGRKLRFSLAEKLGALMRFSRLLIGALNPRAERPPLPDANLANIGGAIIPALGRRWRARG
Ga0209040_105379131	3300027824	Bog Forest Soil	KLTERLIAEIDARYPDGLAEDDVTVLVVRANGRKIRYPFTEKLRAMARIAGALIRSIHPRAERPPLPDANLANIGGAVIPALGRRWRAGKS
Ga0209166_106533981	3300027857	Surface Soil	VTVLVVRANGRKIRYSFAEKVGAIGRMMAALVRSIHPRAERAPLPDAKLANIGGAIIPALGRRWRAPKTAGN
Ga0268265_126776591	3300028380	Switchgrass Rhizosphere	DTLLKEIADRYPENLSDDDVTVLVVRANGRPLRHPFGEKLKALIRFSRSLIGAINPLAERPPFPDANLANIGGAIIPALGKRWRAGAKRSV
Ga0265338_109279671	3300028800	Rhizosphere	DDYVTVMVVRANGSEPRYSFGEKLKAQMRLFGALIRAINPNAERPPLPDMNLANLGGAIIPSLGRRWRAAQVK
Ga0307305_102006011	3300028807	Soil	RYPENLSADDVTVLVARANGRKPGYSFKEKLGALGELSRSLIRAINPRAERPPLPDANLANIGGAIIPALARRWRAPARSAGQSTSS
Ga0308309_102659763	3300028906	Soil	DVTVMVMRANGRESHYSLAEKAGAFARFVVSLIRSVNPKAERAPFPDANLANIGGAIIPALGQRWRVPGATKPGKQL
Ga0311336_106316261	3300029990	Fen	LVRANGRPLHFSLREKLEALLRFSRTLIGALNPRAERPPFPDAKLANIGGAIIPALGRRWRARG
Ga0311338_111996741	3300030007	Palsa	EDDVTVLLVRTNGQKLRFSLREKLNALGRLMATLIRSVNPRAERPPLPDANLANIGGAIFPALGRRWRAARPH
Ga0311338_116395952	3300030007	Palsa	LLVIQASGKQSPHSLGEKLKAHLRLFGSLIRSINPKSERPPLPDMNLANIGGAIIPALGRRWRATGVKPAPSNQDE
Ga0311355_113673621	3300030580	Palsa	DDVTVMVMRANGREAHYSLAEKAEAFARFAGSLIRSVNPSAERAPFPDANLANIGGAIIPALGRRWRASGATKL
Ga0170824_1142012451	3300031231	Forest Soil	FLSEDDVTLLLVRANGTDAHYSFKEKLGALGRFAGSLVRAINPRAERPPFPDASLPNIGGAIIPALGRRWRASR
Ga0302325_128386011	3300031234	Palsa	LTEDDVTVLLVRANGRRVRYTLGEKLGALRRFARSLIRAVNPRAERPPFPDLNLANLGGAIIPALGRRWRAKAP
Ga0265330_102772642	3300031235	Rhizosphere	VTVLVVRVNGRPPHHPFRAKLGAAMRLIRSMIAAINPKAERPPLPDANLANIGGAIIPALGRRWRAAKKS
Ga0302324_1017875111	3300031236	Palsa	VTVLLVEVNERKASYTIREKLGALLRFTGSVARALNPGAERPPFPDLNLANLGGAIIPALARRWRAKTSH
Ga0265325_103429032	3300031241	Rhizosphere	REIAERYPENLSDDDVTVLLVRSSGRPLRFSFKEKLGALLRFSRTLFGALDPRAERPPFPDAKLANIGGAIIPALGRRWRARTGPSSP
Ga0302326_120242711	3300031525	Palsa	FEIAERYPQNLTEDDVTVLLIEVNQRKASFTLGDKLRALFRFSGTLVRSLNPKAERAPFPDLNMANLGGAIIPALARRWRAKPGN
Ga0302326_128320861	3300031525	Palsa	LHPGNLTDDDVTVLVMRANGGERGYSIGEKLEALKRFTGTLLRSINPTAERAPFPDANLANLGGAIIPALARRWRARTGPGKP
Ga0310686_1181713895	3300031708	Soil	VTVLLVEVNERKASYTLGEKLGALARFTGSLFRALNPKAERPPFPDLNLANLGGAIIPALARRWRAKPGNQASPP
Ga0310686_1181851351	3300031708	Soil	LSEDDVTVMVMRANGRELHFSLSEKLGAFARFAGSMIRSVNPSAERAPFPEANLANIGGAIIPALSRRWRAPDEE
Ga0265342_104975492	3300031712	Rhizosphere	MVVRVNGREPRYSFGEKLRAAVRFTGAALRSLHPRAERAPFPDLNLANLGGAILPALGRRWRARS
Ga0307469_122919031	3300031720	Hardwood Forest Soil	RANGRPLRHSFGAKLGAMFRLCRSLLGAINPKAERPPLPDANLANIGGAIIPALGRRWRAGGAKRSV
Ga0307475_111826181	3300031754	Hardwood Forest Soil	DDVTVLLVRANGRQARFSFGQRLRAMLRLTGSLIRAVNPRAERPPLPDANLANIGGAIIPALGRRWRSAKAMRR
Ga0307479_113387522	3300031962	Hardwood Forest Soil	EIAERYPQNLTDDDVTVLVVRANGQKGRYTLGEKLGALRRFAGSLIRAVDPRAERPPFPDLNLANLGGAMIPALGRRWRAKPRN
Ga0307471_1030655902	3300032180	Hardwood Forest Soil	LQREIAERYPENLSEDEVTVRLVRSNGRPLRFSLKEKLEALLRFSRTLIGAIDPRAERPPFPDANLANIGGAIIPAHGRRWRARG
Ga0335085_120599591	3300032770	Soil	VKEIGERYPENLTADDVTLLVLRANGTERRHAFGDFLRAQMRMIGAMIRAINPKAERPPLPDANLANIGGAIIPALGRRWRASQPKSPRS
Ga0335079_121630892	3300032783	Soil	IPCLLDEIAARNPKNLTDDDVTVLAMRASGRELNFSMGEKLGAAMRLGTAMIRSIDPRAERPPLPDAHLANIGGALIPALGRRWRAPE
Ga0335076_109150161	3300032955	Soil	DVTMLVVQANGRELQVPFQDKLRAAGRFAGSLARAISPGAERPPFPDLNLANLGGALIPALGRRWRAPR
Ga0335084_120860981	3300033004	Soil	SEDDVTVLLIRANGHNPGYSFRQKLGAVIRVARSLALAFNPRAERPPLPDANLANVGGAIIPALGQRWRGSVRRPPPMP
Ga0310810_108020093	3300033412	Soil	ANGRPLHHPFGEKLKALMRFSRSLIGAINPQAERPPLPDANLANIGGAIIPALGRRWRAAKPSS
Ga0310811_103719741	3300033475	Soil	AERYPENLSDDDVTVLLVRASGRPLRFSLQEKLEALLRFSRTLIGAFNPRAERPPFPDANLANIGGAIIPALGRRWRARS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080666

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences