NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080930

Metagenome / Metatranscriptome Family F080930

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080930
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 115 residues
Representative Sequence MPKHDEYKEIARAVLAHTAGLLALAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAA
Number of Associated Samples 94
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 64.91 %
% of genes near scaffold ends (potentially truncated) 33.33 %
% of genes from short scaffolds (< 2000 bps) 86.84 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (59.649 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(39.474 % of family members)
Environment Ontology (ENVO) Unclassified
(49.123 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.018 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 60.54%    β-sheet: 0.00%    Coil/Unstructured: 39.46%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF01594AI-2E_transport 2.63
PF13505OMP_b-brl 1.75
PF03354TerL_ATPase 0.88
PF04378RsmJ 0.88
PF06055ExoD 0.88
PF00004AAA 0.88
PF07690MFS_1 0.88
PF04392ABC_sub_bind 0.88
PF03449GreA_GreB_N 0.88
PF13492GAF_3 0.88
PF12706Lactamase_B_2 0.88
PF09140MipZ 0.88
PF12705PDDEXK_1 0.88
PF01226Form_Nir_trans 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 2.63
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 0.88
COG1192ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQCell cycle control, cell division, chromosome partitioning [D] 0.88
COG2116Formate/nitrite transporter FocA, FNT familyInorganic ion transport and metabolism [P] 0.88
COG296123S rRNA A2030 N6-methylase RlmJTranslation, ribosomal structure and biogenesis [J] 0.88
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.88
COG3932Exopolysaccharide synthesis protein ExoDCell wall/membrane/envelope biogenesis [M] 0.88
COG4626Phage terminase-like protein, large subunit, contains N-terminal HTH domainMobilome: prophages, transposons [X] 0.88

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A59.65 %
All OrganismsrootAll Organisms40.35 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c0673426Not Available602Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100397573Not Available801Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_104374342Not Available550Open in IMG/M
3300000956|JGI10216J12902_110801442Not Available971Open in IMG/M
3300004480|Ga0062592_100960282Not Available777Open in IMG/M
3300005174|Ga0066680_10799669Not Available568Open in IMG/M
3300005339|Ga0070660_100988358Not Available711Open in IMG/M
3300005340|Ga0070689_101561553Not Available599Open in IMG/M
3300005406|Ga0070703_10452078Not Available569Open in IMG/M
3300005444|Ga0070694_100034748All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3327Open in IMG/M
3300005445|Ga0070708_101478868Not Available633Open in IMG/M
3300005471|Ga0070698_101597227Not Available604Open in IMG/M
3300005539|Ga0068853_101020110All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium797Open in IMG/M
3300005544|Ga0070686_100121669All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila1793Open in IMG/M
3300005552|Ga0066701_10793038Not Available565Open in IMG/M
3300005556|Ga0066707_10401005All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300006046|Ga0066652_100603423Not Available1035Open in IMG/M
3300007258|Ga0099793_10078279All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1504Open in IMG/M
3300009012|Ga0066710_103328235Not Available613Open in IMG/M
3300009137|Ga0066709_100953716Not Available1253Open in IMG/M
3300009143|Ga0099792_10920674Not Available580Open in IMG/M
3300009148|Ga0105243_11538923Not Available690Open in IMG/M
3300009156|Ga0111538_10475582Not Available1584Open in IMG/M
3300009545|Ga0105237_10560310Not Available1149Open in IMG/M
3300010041|Ga0126312_10875174Not Available654Open in IMG/M
3300010061|Ga0127462_163024All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria953Open in IMG/M
3300010106|Ga0127472_1008081Not Available730Open in IMG/M
3300010336|Ga0134071_10669333Not Available547Open in IMG/M
3300012198|Ga0137364_10098778All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2052Open in IMG/M
3300012198|Ga0137364_10761953Not Available731Open in IMG/M
3300012200|Ga0137382_10188977All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1412Open in IMG/M
3300012200|Ga0137382_10785854Not Available684Open in IMG/M
3300012201|Ga0137365_10053322All Organisms → cellular organisms → Bacteria3059Open in IMG/M
3300012201|Ga0137365_10319454Not Available1149Open in IMG/M
3300012201|Ga0137365_10324185Not Available1140Open in IMG/M
3300012202|Ga0137363_10192968All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1629Open in IMG/M
3300012204|Ga0137374_11093640Not Available568Open in IMG/M
3300012205|Ga0137362_10084450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2653Open in IMG/M
3300012206|Ga0137380_10268812All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1533Open in IMG/M
3300012206|Ga0137380_10436938All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1158Open in IMG/M
3300012207|Ga0137381_10748529Not Available848Open in IMG/M
3300012207|Ga0137381_10751709Not Available846Open in IMG/M
3300012208|Ga0137376_10898444Not Available761Open in IMG/M
3300012209|Ga0137379_10122873All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2496Open in IMG/M
3300012209|Ga0137379_10441871All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1210Open in IMG/M
3300012210|Ga0137378_10376812All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1317Open in IMG/M
3300012210|Ga0137378_10534827Not Available1080Open in IMG/M
3300012210|Ga0137378_11063574Not Available723Open in IMG/M
3300012211|Ga0137377_10149581All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2236Open in IMG/M
3300012211|Ga0137377_10497813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1157Open in IMG/M
3300012351|Ga0137386_10935618Not Available619Open in IMG/M
3300012353|Ga0137367_10425596Not Available940Open in IMG/M
3300012353|Ga0137367_10543109Not Available817Open in IMG/M
3300012355|Ga0137369_10471015Not Available893Open in IMG/M
3300012355|Ga0137369_11056258Not Available534Open in IMG/M
3300012356|Ga0137371_10111460All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium ADurb.Bin3052135Open in IMG/M
3300012357|Ga0137384_10159991All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1885Open in IMG/M
3300012358|Ga0137368_10116261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2038Open in IMG/M
3300012358|Ga0137368_10432316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium859Open in IMG/M
3300012359|Ga0137385_10831648All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium766Open in IMG/M
3300012360|Ga0137375_10195307All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1921Open in IMG/M
3300012361|Ga0137360_11273007Not Available636Open in IMG/M
3300012362|Ga0137361_10884230All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria811Open in IMG/M
3300012364|Ga0134027_1111538All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria880Open in IMG/M
3300012372|Ga0134037_1110152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria770Open in IMG/M
3300012373|Ga0134042_1075868All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria770Open in IMG/M
3300012380|Ga0134047_1103267Not Available504Open in IMG/M
3300012896|Ga0157303_10224469Not Available557Open in IMG/M
3300012914|Ga0157297_10507007Not Available509Open in IMG/M
3300012917|Ga0137395_10358822All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1039Open in IMG/M
3300012927|Ga0137416_11700160Not Available576Open in IMG/M
3300012930|Ga0137407_11775955Not Available588Open in IMG/M
3300012938|Ga0162651_100082139Not Available539Open in IMG/M
3300014157|Ga0134078_10636136Not Available515Open in IMG/M
3300015371|Ga0132258_11467378All Organisms → cellular organisms → Bacteria1723Open in IMG/M
3300015371|Ga0132258_11947683All Organisms → cellular organisms → Bacteria → Proteobacteria1479Open in IMG/M
3300015371|Ga0132258_12069442Not Available1431Open in IMG/M
3300015372|Ga0132256_101061620Not Available925Open in IMG/M
3300015373|Ga0132257_101260656Not Available937Open in IMG/M
3300018072|Ga0184635_10202322Not Available791Open in IMG/M
3300018073|Ga0184624_10017641All Organisms → cellular organisms → Bacteria2614Open in IMG/M
3300018482|Ga0066669_12303260Not Available514Open in IMG/M
3300020170|Ga0179594_10253310Not Available664Open in IMG/M
3300022694|Ga0222623_10407654Not Available516Open in IMG/M
3300024288|Ga0179589_10249123Not Available789Open in IMG/M
3300024347|Ga0179591_1103001All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3486Open in IMG/M
3300025315|Ga0207697_10321870Not Available686Open in IMG/M
3300025918|Ga0207662_10720088Not Available700Open in IMG/M
3300025935|Ga0207709_10994343Not Available685Open in IMG/M
3300026304|Ga0209240_1071849All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1286Open in IMG/M
3300026310|Ga0209239_1184323Not Available781Open in IMG/M
3300026319|Ga0209647_1283590Not Available555Open in IMG/M
3300026328|Ga0209802_1277878Not Available560Open in IMG/M
3300026551|Ga0209648_10653286Not Available575Open in IMG/M
3300026555|Ga0179593_1155093All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2676Open in IMG/M
3300028381|Ga0268264_11157169Not Available783Open in IMG/M
3300028536|Ga0137415_10836340Not Available731Open in IMG/M
3300028784|Ga0307282_10045681All Organisms → cellular organisms → Bacteria1942Open in IMG/M
3300028784|Ga0307282_10644896Not Available513Open in IMG/M
3300028878|Ga0307278_10268408Not Available756Open in IMG/M
3300028878|Ga0307278_10387714Not Available614Open in IMG/M
3300028880|Ga0307300_10349198Not Available510Open in IMG/M
3300028885|Ga0307304_10242738Not Available782Open in IMG/M
3300030829|Ga0308203_1019485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium870Open in IMG/M
3300030902|Ga0308202_1072017All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium672Open in IMG/M
3300030903|Ga0308206_1022415All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1081Open in IMG/M
3300031092|Ga0308204_10037530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1114Open in IMG/M
3300031092|Ga0308204_10066806All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300031092|Ga0308204_10214022All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium607Open in IMG/M
3300031716|Ga0310813_10108731Not Available2169Open in IMG/M
3300031940|Ga0310901_10006089All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium3029Open in IMG/M
3300032000|Ga0310903_10001489All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium5688Open in IMG/M
3300032122|Ga0310895_10009265All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila2865Open in IMG/M
3300033475|Ga0310811_10556991All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1173Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil39.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.02%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.14%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.51%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.63%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.63%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.75%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.88%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.88%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.88%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.88%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.88%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.88%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010061Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010106Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012372Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012373Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012380Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012938Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_067342622228664022SoilLPAPVGVRRNISSFISLSLITRGDGPMPKHDEYKEIARTVLAHTAGVLALAERWLRRADQLDYVVRRRLIPMPHIRHSGLSSDIQDAIGQRLRAQYAIERSMPARLANLLREFEQRNNKLESFARDGYASAA
INPhiseqgaiiFebDRAFT_10039757323300000364SoilMPKHDEYKEIARTVLAHTAGVLALAERWLRRADQLDYVVRRRLIPMPHIRHSGLSSDIQDAIGQRLRAQYAIERSMPARLANLLREFEQRNNKLESFARDGYASAA*
INPhiseqgaiiFebDRAFT_10437434223300000364SoilMPERDDHKKISSRRAGLLDYVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASLRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPKAFA*
JGI10216J12902_11080144223300000956SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVLRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDSIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYSSAA*
Ga0062592_10096028223300004480SoilMPERDDQKKSSSRKAGLLDHVTRALAMAERRFRRADQLDYVIRRRLFPIPLAEGPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0066680_1079966913300005174SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAA*
Ga0070660_10098835823300005339Corn RhizosphereMPERDDQKKSSSRKAGLLDHVTRALAMAERRFRRADQLDYVIRRRLFPIPFADPHKGASIRRSGLSNIQDAIGQGLCKQYAPERSMPARL
Ga0070689_10156155313300005340Switchgrass RhizosphereMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREYEQRSNKPEAFA*
Ga0070703_1045207813300005406Corn, Switchgrass And Miscanthus RhizosphereMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0070694_10003474833300005444Corn, Switchgrass And Miscanthus RhizosphereMPSMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREYEQRSNKPEAFA*
Ga0070708_10147886813300005445Corn, Switchgrass And Miscanthus RhizosphereMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLGYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0070698_10159722713300005471Corn, Switchgrass And Miscanthus RhizosphereTLGSGPMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVLRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDSIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYSSAA*
Ga0068853_10102011013300005539Corn RhizosphereHGMPSMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKSEAFARDGYASAVDAV*
Ga0070686_10012166933300005544Switchgrass RhizospherePSMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0066701_1079303813300005552SoilMGSGPMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPAQLNNLLREFEQRNNRPEAIARDGFASAA*
Ga0066707_1040100533300005556SoilFITHGDGPMPKPDEYKEIARVLAHMAGVLALAERWLRRADQLDYVVRRRLIPVPFEKATRSMPQKEAPIRRSGLSSDIQDAIGQRLRAQYALERSMPARLANLLREFEQRNNTPETSAA*
Ga0066652_10060342323300006046SoilMPHGDSHRKIARVVLAHTARVLAVAERWLRAADHLDYMIRRWLIPIPFGEGDPLDATSMRSSVALSLAQAAIGQRLRAQYALERAMPDRLANLLREFEQRNNKAEAFARTG*
Ga0099793_1007827923300007258Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVARRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDSIGQRLRAQYAVEQSMPARLNNLRRECEQRNNRPEAIARDRYSLQDKAACSMLFYSEASVLI*
Ga0066710_10332823513300009012Grasslands SoilLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAA
Ga0066709_10095371613300009137Grasslands SoilMPNHDEYKKIARAGLAHTAGLLTLAERWLRRADQLDYVVRRRLIPVPFEKATRSMPQKEAPIRRSGLSSDIQDAIGQRLRAQYALERSMPARLANLLREFEQRNNTPETSAA*
Ga0099792_1092067413300009143Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKAIRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYSLQDKAACSMLFYSEASVLI*
Ga0105243_1153892313300009148Miscanthus RhizosphereMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNK
Ga0111538_1047558213300009156Populus RhizosphereMPSMPERDDHKKISSYRAGLLDHVARALTMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0105237_1056031013300009545Corn RhizosphereMPSMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0126312_1087517413300010041Serpentine SoilMPKHDEYNEIARAVLAYTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYSSAA*
Ga0127462_16302423300010061Grasslands SoilMPNHDEYKKIARAGLAHTAGLLALAERWLRRADQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNKPEAFARDGYASAA*
Ga0127472_100808113300010106Grasslands SoilNHDEYKKIARAGLAHTAGLLALAERWFRRADQLDYVVRRRLMPVPFEKATRSMPLKEAPSRRSGLSSDIQDAIGQRLRAQYALERSMPARLANLLREFEQRNNMPEASAA*
Ga0134071_1066933313300010336Grasslands SoilPMPKHDEYKEIARAVLAHTAGLLALAERWLRRADQLDYVVRRRLIPVPFEKATRSMPQKEAPIRRSGLSSDIQDAIGQRLRAQYALERSMPARLANLFREFEQRDNKAEAFARDGYASAA
Ga0137364_1009877823300012198Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYG*
Ga0137364_1076195313300012198Vadose Zone SoilMPNHDEYKKIARAGLAHTAGLLALAERWLRRADQLDYVVRRRLMPVPFEKATRSMPLKEAPIRRSGLSSDIQDAIGQRLRAQYALERSMPARLANLLREFEQRNNTPETSAA*
Ga0137382_1018897723300012200Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAAWNNPPL*
Ga0137382_1078585413300012200Vadose Zone SoilRNVFYLTKVFPYSWGCPMPERPKKTRVMLSRRAGLLDHTARVLAVAERRLRRADQLDYVVRRWLIPIPFEEGTRSMPHKEASIRRSGLSDIQDSIGQGLREQYALERSIPARLAKLLREFDQRSNKPEAFARDGYASAV*
Ga0137365_1005332223300012201Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYSSAA*
Ga0137365_1031945423300012201Vadose Zone SoilMPNHVEYRKIARAGLAHTAGLLALAERWLRRADQLDCVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYALERSMPARLANLLREFEQRNNTPETSAA*
Ga0137365_1032418523300012201Vadose Zone SoilMPKHDEYKEIARAVLAHTAGVLAVAERWLRRADQLDYVVRRRLIPIPFGEGTRSMPHKEASIRRSGLSSDIQDAIGQRLRAEYAIERSMPARITNLLREFEQRNNKPEAFARDGYASAA*
Ga0137363_1019296823300012202Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYPSAA*
Ga0137374_1109364013300012204Vadose Zone SoilPMPKHNEYKEIARAVLAHTAGLLALAEQWLRRADQLDYVVRRRLIPIPFEKETRSMPHKSMPHKEASIRRSGLSSDIQDAIGQRLRAEYALERSMPARLVNLLREFEQQNNKPEAFARDGYASAA*
Ga0137362_1008445013300012205Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKAIRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRY
Ga0137380_1026881213300012206Vadose Zone SoilMDPMPKHNEYKEIARAVLAHTAGLLALAEQWLRRADQLDYVVRRRLIPIPFEKATRSMPHKEASIRRSGLSSDIQDAIGQRLRAEYALERSMPARLANLLREFEQQNNKPEAFARDGYASAA*
Ga0137380_1043693813300012206Vadose Zone SoilMPKHDEYKEIARALLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAA*
Ga0137381_1074852923300012207Vadose Zone SoilMPKHDEYKEIARALLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEH*
Ga0137381_1075170913300012207Vadose Zone SoilMPKHNEYKEIARAALAHTAGVLTLAERWLRRADQLDYVVRRRLIPIPFGEETRSMPHKEASNRRSGLSSDIQDVIGQRLRAQYAVERSMPGRLANLLKRI*
Ga0137376_1089844413300012208Vadose Zone SoilMDPMPKHNEYKEIARPVLAPHTARVLAVAERWLRPADQLDYVIRRWLLTVPFGIRSMHKEASMRSSALNPVQAALGRNLRAEYALERSMPARLANLLREFEQRNNTPEAFARDGFASAA*
Ga0137379_1012287333300012209Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLALAEQWLRRADQLDYMVRRRLIPIPFEKETRSMPHKSMPHKEASIRRSGLSSDIQDAIGQRLRAEYALERSMPARLANLLREFEQQNNKPEAFARDGYASAA*
Ga0137379_1044187133300012209Vadose Zone SoilMPKHNEYKEIARAVLAHTAGVLAVVERGLRRADQLDYVVRRRLIPIPFGEGTRSMAHKEASIRRSGLSSDIQDAIGQRLRAQYAIERSMPARLTNLLREFEQQSSQR
Ga0137378_1037681233300012210Vadose Zone SoilMPKHNEYKEIARAVLAHTAGVLAVVERGLRRADQLDYVVRRRLIPIPFGEETRSMPHKEASNRRSGLSSDIQDAIGQRLRAQYAFERSLPARLANLLREFEQQSNKPEAIARAVTLARLE
Ga0137378_1053482723300012210Vadose Zone SoilMPNHDEYKKIARAGLAHTAGLLALAERWFRRADQLDYVVRRRLMPVPFEKATRSMPLKEAPIRRSGLSSDIQDAIGQRLRAQYALERSMPARLANLLREFEQRNNEPEEFGREGYASTA*
Ga0137378_1106357423300012210Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLALAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAA*
Ga0137377_1014958133300012211Vadose Zone SoilMDPMPKHNEYKEIARPVLAHTARVLAVAERWLRPADQLDYVIRRWLLTVPFGIRSMHKEASMRSSALNPVQAALGRNLRAEYALERSMPARLANLLREFEQRNNTPEAFARDGFASAA*
Ga0137377_1049781323300012211Vadose Zone SoilMPKRNEYKEIARAVLAHTAGVLALAERWLRRADQLDYVVRRRLIPIPFEEGTRSMPHKEASIRRSGLSSDIQDAIGQRLRAQYALERSMPGRLASLLREFERRDNKPEAIARAVTLARLE
Ga0137386_1093561823300012351Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEH*
Ga0137367_1042559613300012353Vadose Zone SoilMPKHNEYKEIARAVLAHTAGVLAVVEPCLRRADQLDYVVRRRLIPIPFGEGTRSMAHKEASIRRSGLSSDIQDAIGQRLRAEYAIERSMPARITNLLREFEQRNNKPEAFALDRYVSAA*
Ga0137367_1054310913300012353Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLALAEQWLRRADQLDYVVRRRLIPIPFEKETRSMPHKSMPHKEASTRRSGLSSDIQDAIGQRLRAEYALERSMPARLANL
Ga0137369_1047101513300012355Vadose Zone SoilMPKHNEYKEIARAVLAHTAGVLAVVEPCLRRADQLDYVVRRRLIPIPFGEETRSMPHKEASIRRSGLSSDIQDAIGQRLRAEYALERSMPARLANLLREFEQQNNKPEAFARDGYASAA*
Ga0137369_1105625813300012355Vadose Zone SoilMLEDDDHKKIARVTARVLAAAERWLRAADQFEYVVRRWLIPIPFGQGVRSMAHKESSIQRSGLSSDIQDAIGQRLRAEYAIERSMPARLANLLREFEQRDNKAEAFARDGYARSP
Ga0137371_1011146033300012356Vadose Zone SoilMPHHDEYKKIARAGLAHTAGLLALAERWLRRADQLDYVVRRRLMPVPFEKATRSMPLKEAPIRRSGLSSDIHDAIGQRLRAQYALERSMPARLANLLREFEQRNNTPEASAA*
Ga0137384_1015999123300012357Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLSAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAA*
Ga0137368_1011626143300012358Vadose Zone SoilMPKHNEYKEIARAVLAHTAGVLAVVERGLRRADQLDYVVRRRLIPIPFGEGTRSMAHKEASIRRSGLSSDIQDAIGQRLRAQYAIERSMPARLTNLLREFETK*
Ga0137368_1043231633300012358Vadose Zone SoilMLEDDDHKKIARVTARVLAAAERWLRAADQFEYVVRRWLIPIPFGQGVRSMAHKESSIQRSGLSSDIQDAIGQRLRAEYAIERSMPARLANLLREFEQRDNKAEAFARDGYARSP*
Ga0137385_1083164813300012359Vadose Zone SoilMPKHNEYKEIARAVLAHTAGVLALAERWLRRADQLDYVVRRRLIPIPFEEGTRSMPHKEASIRRSGLSSDIQDAIGQRLRAQYALERSMPGRLASLLREFERRDNKPEAIARAVTLARLE
Ga0137375_1019530733300012360Vadose Zone SoilMPKHNEYKEIARAVLAHTAGVLAVVERGLRRADQLDYVVRRRLIPIPFGEGTRSMAHKEASIRRSGLSSDIQDAIGQRLRAQYAVERSMPGRLANLLKRI*
Ga0137360_1127300723300012361Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYSLQDKAACSMLFYSEASVLI*
Ga0137361_1088423023300012362Vadose Zone SoilGPMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLANLLREFEQQNNKPEEAFARDGYASAA*
Ga0134027_111153813300012364Grasslands SoilSGPMPNHDEYKKIARAGLAHTAGLLALAERWLRRADQLDYVVRRRLIPVPFEKATRSMPQKEAPIRRSGLSSDIQDAIGQRLRAQYALERSMPARLANLLREFEQRNNTPEASAA*
Ga0134037_111015213300012372Grasslands SoilKIARAGLAHTAGLLALAERWLRRADQLDYVVRRRLIPVPFEKATRSMPQKEAPIRRSGLSSDIQDAIGQRLRAQYALERSMPARLANLLREFEQRNNTPETSAA*
Ga0134042_107586813300012373Grasslands SoilMPNHDEYKKIARAGLAHTAGLLALAERCLRRADQLDYVVRRRLMPVPFEKATRSMPLKEAPIRRSGLSSDIQDAIGQRLRAQYALERSMPARLANLLREFEQRNNTPEASAA*
Ga0134047_110326713300012380Grasslands SoilGMDPMPKHNEYKEIARPVLAPHTARVLAVAERWLRPADQLDYVIRRWLLTVPFGIRSMHKEASMRSSALNPVQAALGRNLRAEYALERSMPARLANLLREFEQRNNTPEAFARDGFASAA
Ga0157303_1022446913300012896SoilLDLPVGIPPERFLTCRGFPQIHGMPSMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCDQYAPERSMPARLAHLLREFEQRSNKPEAFA*
Ga0157297_1050700713300012914SoilMPSMPERDDQKKSSSRKAGLLDHVTRALAMAERRFRRADQLDYVIRRRLFPIPFAEGTSEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0137395_1035882213300012917Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDSIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYPSAA*
Ga0137416_1170016023300012927Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSHIQDAIGQRFRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAA*
Ga0137407_1177595523300012930Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAP*
Ga0162651_10008213923300012938SoilGVLALAERWLRRADQLDYVVRRWLMPIPFGDGARSTPHKEASIRRGGLSSDIQVAIGQSLRAQYAIERSMPARLTNLLREFEQQAFARDGYASAA*
Ga0134078_1063613613300014157Grasslands SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEA
Ga0132258_1146737823300015371Arabidopsis RhizosphereMPERDDHKKISSRRADLLDYVARALAVAERRFHRADQLDYVIRRRLFPIPFTEGTSEASIRRSGLFQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0132258_1194768323300015371Arabidopsis RhizosphereMPERNDHNKISSRRADLFDYVARALAVAERRFRRADQLDHVIRRRLFPIPFGEGTRSMPHKEASIRRSGLSDIQDAIGQGLCERYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0132258_1206944213300015371Arabidopsis RhizosphereMPERDDHKKISSRRADLLDLVARALAMVERRFRGVDQLDYVIRRRLFPIPFREGTRSKPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0132256_10106162013300015372Arabidopsis RhizosphereMPERDDQKKSSSRKAGLLDHVTRALAMAERRFRRADQLDYVIRRRLFPIPLAEGPHKETSIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0132257_10126065613300015373Arabidopsis RhizosphereMPSMPERDDQKKSSSRKAGLLDHVTRALAMAERRFRRADQLDYVIRRRLFPIPFTEGTSEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA*
Ga0184635_1020232223300018072Groundwater SedimentMLSRRAGLLDHTARVLAVAERRLRRADQLDCVVRRWLIPIPFEEGTRSMPHKEASIRRSGLSDIQDSIGQGLREQYALERSMPARLANLLREFEQRSNKPEAFARDGYASAV
Ga0184624_1001764113300018073Groundwater SedimentMPNRDDPKKTRVMLSRRAGLLDHTARVLAVAERRLRRADQLDYVVRRWLIPIPFEEGTRSMPHKEASIRRSGLSDIQDSIGQGLREQYALERSMPARLANLLREFEQRSNKPEAFARDGYASAV
Ga0066669_1230326013300018482Grasslands SoilMGSGPMPNHDEYKKIARAGLAHTAGLLALAERWLRRADQLDYVVRRRLMPVPFEKATRSMPQKEAPIRRSGLSSDIQDAIGQRLRAQYALERSMPARLANLLREFEQQDNTPEKRSLNNP
Ga0179594_1025331023300020170Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKAIRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYG
Ga0222623_1040765413300022694Groundwater SedimentMPERYDHKKILSHTARVLAVAERWLRPADQLDYAIRRWLIPVPFEDGTRSMPHKEASMRSNGSLSEVQAAIGQRLRAQYALERSMPARLANLLREFEQRDETGGDDQTAVLAGA
Ga0179589_1024912313300024288Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLINLLREFEQRNNRPEAIARDSYASAAR
Ga0179591_110300133300024347Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAA
Ga0207697_1032187013300025315Corn, Switchgrass And Miscanthus RhizosphereMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA
Ga0207662_1072008823300025918Switchgrass RhizosphereMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREYEQRSNKPEAFA
Ga0207709_1099434323300025935Miscanthus RhizosphereMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRS
Ga0209240_107184923300026304Grasslands SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYPSAA
Ga0209239_118432313300026310Grasslands SoilMGSGPMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAARM
Ga0209647_128359013300026319Grasslands SoilGPMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYPSA
Ga0209802_127787823300026328SoilNEYKEIARAVLAHTAGVLALAERWLRRADQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAA
Ga0209648_1065328623300026551Grasslands SoilARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKAIRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYPSAA
Ga0179593_115509323300026555Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSDIQDAIGQRLRAQYSVEQSMPARLNNLLREFEQRNNRPEAIAR
Ga0268264_1115716913300028381Switchgrass RhizosphereMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDTIGQRLRERYAPERSTPTRLANLLREFEQRSNKSEAFARDGYASAVDAV
Ga0137415_1083634023300028536Vadose Zone SoilMPKHDEYKEIARAVLAHTAGLLGLAERWLRRANQLDYVVRRRLIPVPFEKATRSMPRKEASIRRIGLSSHIQDAIGQRFRAQYAVEQSMPARLNNLLREFEQRNNRPEAIARDRYASAA
Ga0307282_1004568143300028784SoilMPERDDPKKTRVMLSRRAGLLDHTARVLAVAERRLRRADQLDYVVRRWLIPIPFEEGTRSMPHKEASIRRSGLSDIQDSIGQGLREQYALERSMPARLANLLREFEQRSNKPEAFARDGYASAV
Ga0307282_1064489613300028784SoilMPERYDHKKILSHTARVLAVAELWLRPADQLDYAIRRWLIPVPFEDGTRSMPHKEASMRSNGSLSEVQAAIGQRLRAQYALERSMPARLANLLREFEQRDETGGDDQTAVLAGA
Ga0307278_1026840813300028878SoilMPKHNEYKEIARAALAHTAGVLALAERWLRRADQLDYVVRRRLIPIPFGEGARSMPHKEASIRRIGLSSDIQDAIGQRLRAEYALERSMPGQLANLLREFEQRNNKPEAFARDGFASAA
Ga0307278_1038771413300028878SoilMPKHNEYKEIARPVLAHTARVLAVAERWLRPADQLDYVIRRWLLPVPFGIRSMHKEASMRSSSLNPVQAAIGRNLRAEYAFERSMPARLANLLKEFEQRNNTPEAFARDGFASAA
Ga0307300_1034919813300028880SoilMPERDDPKKTRVMLSRRAGLLDHTAPVLAVAERRLRRADQLDYVVRRWLIPIPFEEGTRSMPHKEASIRRSGLSDIQDSIGQGLREQYALERSMPARLANLLREFEQRSNKPEAFARDGYASAV
Ga0307304_1024273813300028885SoilMPERDDPKKTRVMLSRRAGLLDHTARVLAVAERRLRRADQLDYVVRRWLIPIPFEEGTRSMPHKEASIRRSGLSDIQDSIGQGLREQYALERSMPARLANLLREF
Ga0308203_101948523300030829SoilDPMPKHNEYKEIARSVLAHTPRVLAVAERWLRPADQLDYAIRRWLIPVPFEDGTRSMPHKEASMRSNGSLSEVQAAIGQRLRAQYALERSMPARLANLLREFEQRDETGGDDQTAVLAGA
Ga0308202_107201723300030902SoilPMPERYDHKKILSHTARVLAVAERWLRPADQLDYAIRRWLIPVPFEDGTRSMPHKEASMRSNGSLSEVQAAIGQRLRAQYALERSMPARLANLLREFEQRDETGGDDQTAVLAGA
Ga0308206_102241513300030903SoilKHDEYKEIARAVLAHTAGVLALAERWLRRADQLDYVVRRRLIPIPFGEGTRSMPHKEASIRRSGLSSDIQDVIGQRLRAEYALERSMPARLANLLREFEDRSNKPEAFARDGYASAA
Ga0308204_1003753013300031092SoilPKHDEYKEIARAVLAHTAGVLALAERWLRRADQLDYVVRRRLIPIPFGEGTRSMPHKEASIRRSGLSSDIQDVIGQRLRAEYALERSMPARLANLLREFEDRSNKPEAFARDGYASAA
Ga0308204_1006680623300031092SoilPMPERDDPKKTRVMLSRRAGLLDHTARVLAVAERRLRRADQLDYVVRRWLIPIPFEEGTRSMPHKEASIRRSGLSDIQDSIGQGLREQYAPERSMPARLANLLREFEQRSNKPEAFARDGYASAV
Ga0308204_1021402213300031092SoilPERYDHKKILSHTARVLAVAERWLRPADQLDYAIRRWLIPVPFEDGTRSMPHKEASMRSNGSLSEVQAAIGQRLRAQYALERSMPARLANLLREFEQRDETGGDDQTAVLAGA
Ga0310813_1010873133300031716SoilMPERDDHKKISSRRAGLLEHVARAIVMAERRFRRADQLDYAIRRRLFPIPFADPHKGASIGRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREYEQRSNKPEAFA
Ga0310901_1000608963300031940SoilMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREYE
Ga0310903_1000148933300032000SoilMPSMPERDDHKKISSCRAGLLDHVARALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREYEQRSNKPEAFA
Ga0310895_1000926523300032122SoilMPERDDQKKSSSRKAGLLDHVTRALAMAERRFRRADQLDYVIRRRLFPIPFADPHKEASIRRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLREFEQRSNKPEAFA
Ga0310811_1055699113300033475SoilMPERDDHKKISSRRAGLLEHVARAIVMAERRFRRADQLDYAIRRRLFPIPFADPHKGASIGRSGLSDIQDAIGQCLCEQYAPERSMPARLANLLSEFEQRSNKPEAFA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.