Metagenome / Metatranscriptome Family F080968

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F080968
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	62 residues
Representative Sequence	MTARKEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Number of Associated Samples	84
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.82 %
% of genes near scaffold ends (potentially truncated)	18.42 %
% of genes from short scaffolds (< 2000 bps)	70.18 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (73.684 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (23.684 % of family members)
Environment Ontology (ENVO)	Unclassified (53.509 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (48.246 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.70% β-sheet: 0.00% Coil/Unstructured: 57.30%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00266	Aminotran_5	24.56
PF05988	DUF899	7.89
PF00753	Lactamase_B	2.63
PF13231	PMT_2	2.63
PF04255	DUF433	0.88
PF00891	Methyltransf_2	0.88
PF04471	Mrr_cat	0.88
PF03551	PadR	0.88
PF03129	HGTP_anticodon	0.88
PF01156	IU_nuc_hydro	0.88
PF13620	CarboxypepD_reg	0.88
PF17137	DUF5110	0.88
PF02371	Transposase_20	0.88
PF04972	BON	0.88
PF13360	PQQ_2	0.88
PF00355	Rieske	0.88
PF00677	Lum_binding	0.88
PF01261	AP_endonuc_2	0.88
PF06315	AceK_kinase	0.88
PF00210	Ferritin	0.88
PF13147	Obsolete Pfam Family	0.88
PF12704	MacB_PCD	0.88
PF00587	tRNA-synt_2b	0.88
PF00459	Inositol_P	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	7.89
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.88
COG0307	Riboflavin synthase alpha chain	Coenzyme transport and metabolism [H]	0.88
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.88
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.88
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.88
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.88
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.88
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.88
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	0.88
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.88
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.88
COG4579	Isocitrate dehydrogenase kinase/phosphatase	Signal transduction mechanisms [T]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.68 %
Unclassified	root	N/A	26.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.68 %
Unclassified	root	N/A	26.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.68 %
Unclassified	root	N/A	26.32 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.09 %
Unclassified	root	N/A	26.32 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.54 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	5.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	6.14 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	5.26 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.88 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.26 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	3.51 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.88 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.88 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.88 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.26 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.75 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.75 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.88 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.88 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.88 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.88 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.26 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	1.75 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.88 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.88 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.88 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.88 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.32 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	5.26 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1.75 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.88 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.88 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.88 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.88 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100405599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1098	Open in IMG/M
3300005529\|Ga0070741_10000278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	195308	Open in IMG/M
3300005529\|Ga0070741_11732557	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	507	Open in IMG/M
3300005531\|Ga0070738_10001705	All Organisms → cellular organisms → Bacteria	40831	Open in IMG/M
3300005538\|Ga0070731_10183857	All Organisms → cellular organisms → Bacteria → Acidobacteria	1388	Open in IMG/M
3300005610\|Ga0070763_10907943	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	524	Open in IMG/M
3300006052\|Ga0075029_100291153	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300006102\|Ga0075015_100404627	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300006893\|Ga0073928_10068923	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3081	Open in IMG/M
3300009522\|Ga0116218_1331752	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300009522\|Ga0116218_1436492	Not Available	584	Open in IMG/M
3300009552\|Ga0116138_1196332	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300009552\|Ga0116138_1196958	Not Available	556	Open in IMG/M
3300009623\|Ga0116133_1068499	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300009623\|Ga0116133_1075463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	844	Open in IMG/M
3300009638\|Ga0116113_1142775	Not Available	596	Open in IMG/M
3300009645\|Ga0116106_1209209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	621	Open in IMG/M
3300009645\|Ga0116106_1223682	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	599	Open in IMG/M
3300009665\|Ga0116135_1003355	All Organisms → cellular organisms → Bacteria	6837	Open in IMG/M
3300009665\|Ga0116135_1116600	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300009683\|Ga0116224_10522038	Not Available	566	Open in IMG/M
3300009762\|Ga0116130_1196490	Not Available	639	Open in IMG/M
3300009764\|Ga0116134_1037201	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300010048\|Ga0126373_11982427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	645	Open in IMG/M
3300010379\|Ga0136449_100037941	All Organisms → cellular organisms → Bacteria	11324	Open in IMG/M
3300010379\|Ga0136449_100149577	All Organisms → cellular organisms → Bacteria	4587	Open in IMG/M
3300010379\|Ga0136449_101999661	Not Available	856	Open in IMG/M
3300010379\|Ga0136449_103478862	Not Available	600	Open in IMG/M
3300012931\|Ga0153915_12758353	Not Available	574	Open in IMG/M
3300014155\|Ga0181524_10311159	Not Available	714	Open in IMG/M
3300014156\|Ga0181518_10491513	Not Available	582	Open in IMG/M
3300014158\|Ga0181521_10003543	All Organisms → cellular organisms → Bacteria → Acidobacteria	18326	Open in IMG/M
3300014160\|Ga0181517_10053684	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2472	Open in IMG/M
3300014161\|Ga0181529_10086499	All Organisms → cellular organisms → Bacteria → Acidobacteria	2041	Open in IMG/M
3300014164\|Ga0181532_10171892	All Organisms → cellular organisms → Bacteria → Acidobacteria	1287	Open in IMG/M
3300014167\|Ga0181528_10785897	Not Available	534	Open in IMG/M
3300014168\|Ga0181534_10015867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	3861	Open in IMG/M
3300014489\|Ga0182018_10159231	All Organisms → cellular organisms → Bacteria → Acidobacteria	1286	Open in IMG/M
3300014492\|Ga0182013_10111653	All Organisms → cellular organisms → Bacteria → Acidobacteria	1814	Open in IMG/M
3300014492\|Ga0182013_10205356	All Organisms → cellular organisms → Bacteria → Acidobacteria	1180	Open in IMG/M
3300014493\|Ga0182016_10724672	Not Available	557	Open in IMG/M
3300014502\|Ga0182021_10908142	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300016702\|Ga0181511_1228216	Not Available	542	Open in IMG/M
3300016702\|Ga0181511_1403413	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300016705\|Ga0181507_1002884	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300016750\|Ga0181505_10078923	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300016750\|Ga0181505_10595823	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	749	Open in IMG/M
3300016750\|Ga0181505_10693238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300017934\|Ga0187803_10041473	All Organisms → cellular organisms → Bacteria → Acidobacteria	1823	Open in IMG/M
3300017935\|Ga0187848_10432269	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300017940\|Ga0187853_10368675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	639	Open in IMG/M
3300017946\|Ga0187879_10037949	All Organisms → cellular organisms → Bacteria	2883	Open in IMG/M
3300017946\|Ga0187879_10097549	All Organisms → cellular organisms → Bacteria → Acidobacteria	1686	Open in IMG/M
3300017946\|Ga0187879_10263442	Not Available	959	Open in IMG/M
3300017946\|Ga0187879_10328464	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	848	Open in IMG/M
3300017948\|Ga0187847_10006845	All Organisms → cellular organisms → Bacteria	7979	Open in IMG/M
3300017970\|Ga0187783_10683930	Not Available	741	Open in IMG/M
3300017972\|Ga0187781_11181686	Not Available	563	Open in IMG/M
3300017975\|Ga0187782_10101762	All Organisms → cellular organisms → Bacteria	2116	Open in IMG/M
3300017988\|Ga0181520_10125285	All Organisms → cellular organisms → Bacteria → Acidobacteria	2139	Open in IMG/M
3300018022\|Ga0187864_10144033	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300018023\|Ga0187889_10507561	Not Available	514	Open in IMG/M
3300018025\|Ga0187885_10493372	Not Available	546	Open in IMG/M
3300018026\|Ga0187857_10176278	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300018034\|Ga0187863_10019895	All Organisms → cellular organisms → Bacteria	4111	Open in IMG/M
3300018035\|Ga0187875_10119222	All Organisms → cellular organisms → Bacteria → Acidobacteria	1490	Open in IMG/M
3300018037\|Ga0187883_10138368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1257	Open in IMG/M
3300018038\|Ga0187855_10028858	All Organisms → cellular organisms → Bacteria	3562	Open in IMG/M
3300018042\|Ga0187871_10208945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1090	Open in IMG/M
3300018046\|Ga0187851_10196776	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300018047\|Ga0187859_10314912	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300018057\|Ga0187858_10188866	All Organisms → cellular organisms → Bacteria → Acidobacteria	1351	Open in IMG/M
3300018086\|Ga0187769_10403417	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300018088\|Ga0187771_10435985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1106	Open in IMG/M
3300018088\|Ga0187771_11188602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	647	Open in IMG/M
3300019230\|Ga0181501_1135812	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300021861\|Ga0213853_10699691	Not Available	517	Open in IMG/M
3300022557\|Ga0212123_10086757	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300023088\|Ga0224555_1011508	All Organisms → cellular organisms → Bacteria	5341	Open in IMG/M
3300027706\|Ga0209581_1000606	All Organisms → cellular organisms → Bacteria	65149	Open in IMG/M
3300027905\|Ga0209415_10916288	Not Available	594	Open in IMG/M
3300027911\|Ga0209698_10013024	All Organisms → cellular organisms → Bacteria	8229	Open in IMG/M
3300027911\|Ga0209698_10583546	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300028789\|Ga0302232_10632172	Not Available	526	Open in IMG/M
3300029910\|Ga0311369_11292966	Not Available	558	Open in IMG/M
3300030659\|Ga0316363_10202334	Not Available	827	Open in IMG/M
3300031249\|Ga0265339_10283941	Not Available	793	Open in IMG/M
3300031962\|Ga0307479_11630089	Not Available	600	Open in IMG/M
3300032160\|Ga0311301_10132614	All Organisms → cellular organisms → Bacteria	4618	Open in IMG/M
3300032160\|Ga0311301_12076657	Not Available	659	Open in IMG/M
3300032160\|Ga0311301_12305260	Not Available	612	Open in IMG/M
3300032770\|Ga0335085_10000011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	749584	Open in IMG/M
3300032770\|Ga0335085_10000112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	264344	Open in IMG/M
3300032783\|Ga0335079_10015980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8579	Open in IMG/M
3300032783\|Ga0335079_10028999	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6344	Open in IMG/M
3300032783\|Ga0335079_11418109	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300032805\|Ga0335078_10013395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12152	Open in IMG/M
3300032805\|Ga0335078_10120284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3757	Open in IMG/M
3300032805\|Ga0335078_10142015	All Organisms → cellular organisms → Bacteria	3408	Open in IMG/M
3300032805\|Ga0335078_10151074	All Organisms → cellular organisms → Bacteria → Acidobacteria	3286	Open in IMG/M
3300032805\|Ga0335078_10619861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1360	Open in IMG/M
3300032805\|Ga0335078_10745044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1205	Open in IMG/M
3300032805\|Ga0335078_10972458	Not Available	1009	Open in IMG/M
3300032828\|Ga0335080_11107522	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300032893\|Ga0335069_10649828	All Organisms → cellular organisms → Bacteria → Acidobacteria	1204	Open in IMG/M
3300032893\|Ga0335069_10649850	All Organisms → cellular organisms → Bacteria → Acidobacteria	1204	Open in IMG/M
3300032954\|Ga0335083_10154553	All Organisms → cellular organisms → Bacteria → Acidobacteria	2161	Open in IMG/M
3300032955\|Ga0335076_10941751	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	745	Open in IMG/M
3300033158\|Ga0335077_10123511	All Organisms → cellular organisms → Bacteria	3006	Open in IMG/M
3300033480\|Ga0316620_10145813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1889	Open in IMG/M
3300033486\|Ga0316624_11323951	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300033822\|Ga0334828_010664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3180	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.12%
Host-Associated	Host-Associated	0.88%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	50.00%
Terrestrial	Environmental → Terrestrial	49.12%
Plants	Host-Associated → Plants	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.61%
Freshwater	Environmental → Aquatic → Freshwater	44.74%
Sediment	Environmental → Aquatic → Sediment	3.51%
Peat	Environmental → Terrestrial → Peat	3.51%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.88%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	43.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	28.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	16.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.51%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.88%
Loam	Environmental → Terrestrial → Soil → Loam	0.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.88%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	32.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	22.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.79%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.51%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	23.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	17.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.53%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	9.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.51%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.51%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.75%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.75%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.88%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.88%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.88%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019230	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1004055991	3300004152	Bog Forest Soil	MTAKAKMKTEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0070741_10000278108	3300005529	Surface Soil	MAVKRQRYPSETDVHAAERYLESLLDSDAPLAPGERELMEQSIEAIRDGRMTLEEFERKHGA*
Ga0070741_117325572	3300005529	Surface Soil	MTDRSQVLPESDLHVAERYLESLLDSDEPLAPGEVEEVQESVQAIRRGEMTLAEFERKHGV*
Ga0070738_1000170521	3300005531	Surface Soil	MTAKRQLEPSETALHAAQRYLESLLDTDAPLTPGELESVQDSVEQIRQGKMTLEEFERKHGL*
Ga0070731_101838572	3300005538	Surface Soil	MTDKNAVLPESDLHSAGRYLENLLDSDEPLAPGEIEEIQGSIESIRRGEMTLADFERKHGV*
Ga0070763_109079432	3300005610	Soil	MTAKTELLPARDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0075029_1002911532	3300006052	Watersheds	MTARKEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0075015_1004046272	3300006102	Watersheds	MTARKEVLPASDLHAAQRYLESLLDSDQPLSPGEIEEIQESIEGIRRGDMTLADFERKHGV*
Ga0073928_100689232	3300006893	Iron-Sulfur Acid Spring	MTAHKEALAESDVHAAQRYLESLLDSDQPLSPGEIEEIQQSIESIRRGEMTLGEFERKHGE*
Ga0116218_13317522	3300009522	Peatlands Soil	MTAKAKNRTEGLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0116218_14364921	3300009522	Peatlands Soil	MTAKAKMKKEVLPASDLHAAQRYLESLLDSDEPLAPGEVEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0116138_11963322	3300009552	Peatland	MTAHAKTNAAVLPAGDLHAAQRYLESLLDSDAPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0116138_11969582	3300009552	Peatland	MTAKKELLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIDGIRRGEMTLADFERKHGV*
Ga0116133_10684991	3300009623	Peatland	KTNAAVLPAGDLHAAQRYLESLLDSDAPLSPGEIEAIQDSIEGIRRGDMTLADFERKHGV
Ga0116133_10754632	3300009623	Peatland	MTAKAKSKTEALPASDLHAAQRYLESLLDSDEPLAPGEIEEIQDSIEGIRRGDMTLADFEHKHGV*
Ga0116113_11427752	3300009638	Peatland	MTARKEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEDIRRGSMTLADFERKHGAV*
Ga0116106_12092092	3300009645	Peatland	MTAKKEGLPASDLHGAQRYLESLLDSDEPLSPGEIEEIQESIEGIRRGDMTLADFERKHGV*
Ga0116106_12236821	3300009645	Peatland	LPHRACNVFYWRQEVDMTARKEALPESDVHAAQRYLESLLDSDEPLSPGEKEAIQDSIEAIRRGEMTLGEFERKHGVEG*
Ga0116135_10033554	3300009665	Peatland	MTARNEAVPASDLHAAQRYLESLLDSDEPLAPGEIEEIEDSIEGIRRGDMTLAEFERKHGV*
Ga0116135_11166002	3300009665	Peatland	MTAHAKTNAAVLPAGDLHAAQRYLESLLDSDAPLSPGEIEAIQDSIEGIRRGDMTLADFERKHGV*
Ga0116224_105220382	3300009683	Peatlands Soil	MTAKARNRTEGLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLTDFEHKHGV*
Ga0116130_11964901	3300009762	Peatland	MTAKAKVKTEALPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFEHKHGV*
Ga0116134_10372012	3300009764	Peatland	MTARKEALPESDVHAAQRYLESLLDSDEPLSPGEKEAIQDSIEAIRRGKMTLGEFERKHGVEG*
Ga0126373_119824271	3300010048	Tropical Forest Soil	EILPESDVHAAQRYLESLLDSDEPLSPGEIEEIQESIAAIRRGEMTLEEFERKHGG*
Ga0136449_1000379417	3300010379	Peatlands Soil	MTAKARNRTEGLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0136449_1001495772	3300010379	Peatlands Soil	MTAKAKMKAEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0136449_1019996612	3300010379	Peatlands Soil	MTAKAKITTEALPARDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLTDFEHKHGV*
Ga0136449_1034788621	3300010379	Peatlands Soil	MTAKAKMKKEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0153915_127583532	3300012931	Freshwater Wetlands	MTARKEVLPESDLHAAQRYLESLLDSDQPLAPGEIEEIQDSINAIRRGNMTLAEFERKHGVEG*
Ga0181524_103111592	3300014155	Bog	MTARKEALPESDVHAAQRYLESLLDSDEPLSPGEKEAIQDSIEAIRRGEMTLGEFERKHGVEG*
Ga0181518_104915132	3300014156	Bog	MTAKAKVKTEALPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0181521_100035434	3300014158	Bog	VFYWRQEVDMTARKEALPESDVHAAQRYLESLLDSDEPLSPGEKEAIQDSIEAIRRGEMTLGEFERKHGVEG*
Ga0181517_100536842	3300014160	Bog	MTAKAKVKTEALPASDLHAAQRYLESLLDSDEPLAPGEIEEIQDSIEGIRRGDMTLADFEHKHGV*
Ga0181529_100864992	3300014161	Bog	MTAKAKVKTEALPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRSGDMTLADFEHKHGV*
Ga0181532_101718921	3300014164	Bog	MTARKEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRSGDMTLADFEHKHGV*
Ga0181528_107858971	3300014167	Bog	MTAKTEVLPARDLHAAQRYLESLLDSDEPLAPGEIEEIQDSIEGIRRGDMTLADFEHKHGV*
Ga0181534_100158672	3300014168	Bog	MTAKTEVLPARDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0182018_101592313	3300014489	Palsa	MTAKAKMSTAALPAQDLHAAQRYLESLLDSDEPLAPGEIEEIQDSIEGIRRGDMTLADFERKHGV*
Ga0182013_101116532	3300014492	Bog	MTAKAKSKTEALPAADLHAAQRYLESLLDSDEPLAPGEIEEIQDSIEGIRRGDMTLADFEHKHGV*
Ga0182013_102053562	3300014492	Bog	MTARKEVLPASDLHAAQRYLESLLDSDEPLSPGEVEEIQESIEGIRRGDMTLADFERKHGV*
Ga0182016_107246722	3300014493	Bog	MTAPKQSLPESDVHVAQRYLENLLDSDEPSSPGEIEEIQESIAAIRQGEMTLEEFERKHGV*
Ga0182012_106415232	3300014499	Bog	MTAKAKSKTEALPAADLHAAQRYLESLLDSDEPLAPGEIEEIQDSIEGI
Ga0182021_109081422	3300014502	Fen	MTASKQFSLDSDLHTAERYLESLLDSDEPLSPGEIEEVETSVEAIRRGDMTLTEFERKHGV*
Ga0181511_12282162	3300016702	Peatland	TAKAKMNTEILPASDLHAAQRYLESLLDSDQPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0181511_14034132	3300016702	Peatland	TAKKELLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIDGIRRGEMTLADFERKHGV
Ga0181507_10028841	3300016705	Peatland	AKAKVKTEALPASDLHAAQRYLESLLDSDEPLSPGEVEEIQDSIEGIRRGDMTLADFERKHGV
Ga0181505_100789232	3300016750	Peatland	TAKAKMKTEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0181505_105958232	3300016750	Peatland	MTARKEALPESDVHAAQRYLESLLDSDEPLSPGEKEAIQDSIEAIRRGEMTLGEFERKHGVEG
Ga0181505_106932381	3300016750	Peatland	TAKAKLNTEILPASDLHAAQRYLESLLDSDQPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0187803_100414732	3300017934	Freshwater Sediment	MTAKAKMKAEVLPASDLHAAQRYLESLLDSDQPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0187848_104322691	3300017935	Peatland	MTAKAKVKTEALPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFEHKHGV
Ga0187853_103686751	3300017940	Peatland	MTAKKEGLPASDLHGAQRYLDSLLDSDEPLSPGEIEEIQESIEGIRRGDMTLADFERKHG
Ga0187850_104383972	3300017941	Peatland	MTAKKELLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIDGIRRGE
Ga0187879_100379491	3300017946	Peatland	MTAHAKTKAAVLPAGDLHAAQRYLESLLDSDAPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0187879_100975493	3300017946	Peatland	MTAKAKSKTEALPASDLHAAQRYLESLLDSDEPLAPGEIEEIQDSIEGIRRGDMTLADFEHKHGV
Ga0187879_102634423	3300017946	Peatland	MTARKELSPAGDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEDIRRGSMTLADFERKHGAV
Ga0187879_103284641	3300017946	Peatland	AAVLPAGDLHAAQRYLESLLDSDAPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0187847_100068455	3300017948	Peatland	MTAKKELLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIDGIRRGEMTLADFERKHG
Ga0187783_106839301	3300017970	Tropical Peatland	MMDRKVALPESDLHAAQRYLESLLDSDEPLTPGEIEKVEESIEAIRRGDMTLTDFERKHG
Ga0187781_111816861	3300017972	Tropical Peatland	MTAKAKMKTESLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQESIEGIRRGDMTLADFERKHGV
Ga0187782_101017623	3300017975	Tropical Peatland	MTDRKVALPDSDLHAAQRYLESLLDSDEPLTPGEIEKVQDSVDAIRRGDMTLTDFERKHG
Ga0181520_101252852	3300017988	Bog	MTAKAKVKTEALPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRSGDMTLADFEHKHGV
Ga0187864_101440333	3300018022	Peatland	MTARKEVLPASDLHAAQRYLESLLDSDEPLSPGETEEIQDSIEGIRRGDMTLADFERKHG
Ga0187889_105075611	3300018023	Peatland	MTAKAKSKAEALPASDLHAAQRYLESLLDSDEPLAPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0187885_104933721	3300018025	Peatland	MTAKKEGLPASDLHGAQRYLESLLDSDEPLSPGEIEEIQESIEGIRRGDMTLADFERKH
Ga0187857_101762782	3300018026	Peatland	MTARKEALPESDVHAAQRYLESLLDSDEPLSPGEKEAIQDSIEAIRRGKMTLGEFERKHGVEG
Ga0187863_100198954	3300018034	Peatland	MTAKAKSKTEALPAADLHAAQRYLESLLDSDEPLAPGEIEEIQDSIEGIRRGDMTLADFEHKHGV
Ga0187875_101192222	3300018035	Peatland	MTAKAKSKAEALPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFEHKHGV
Ga0187883_101383682	3300018037	Peatland	MTAKKEGLPASDLHGAQRYLESLLDSDEPLSPGEIEEIQESIEGIRRGDMTLADFERKHG
Ga0187855_100288583	3300018038	Peatland	MTAHAKTNAAVLPAGDLHAAQRYLESLLDSDAPLSPGEIEAIQDSIEGIRRGDMTLADFERKHGV
Ga0187871_102089451	3300018042	Peatland	MTAHAKTNAAVLPAGDLHAAQRYLESLLDSDAPLSPGEIEAIQDSSEGIRRGDMTIADFERKHGV
Ga0187851_101967762	3300018046	Peatland	MTAKASMKTERLPASDLHAAQRYLESLLDSDEPLAPGEIEEIQESIEGIRRGEMTLTDFERKHG
Ga0187859_103149121	3300018047	Peatland	KSKTEALPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0187858_101888662	3300018057	Peatland	MTAKAKSKTEALPASDLHAAQRYLESLLDSDAPLSPGEIEEIQDSIEGIRRGDMTLADFEHKHGV
Ga0187769_104034172	3300018086	Tropical Peatland	MKTESLPASDLHAAQRYLETLLDSDEPLSPGEIEEIQESIEGIRRGDMTLADFERKHGV
Ga0187771_104359851	3300018088	Tropical Peatland	MTAKAKMKAAVLPASDLHAAQRYLESLLDSDQPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0187771_111886022	3300018088	Tropical Peatland	MTAKAKMKSEVRPASDLHAAQRYLESLLDSDQPLSPGEIEEIQDSIEAIRRGDMTLSDFERKHGV
Ga0181501_11358122	3300019230	Peatland	AKAKSKTEALPASDLHAAQRYLESLLDSDEPLAPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0213853_106996912	3300021861	Watersheds	MTARKEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGEMTLADFE
Ga0212123_100867571	3300022557	Iron-Sulfur Acid Spring	MTAHKEALAESDVHAAQRYLESLLDSDQPLSPGEIEEIQQSIESIRRGEMTLGEFERKHG
Ga0224555_10115082	3300023088	Soil	MTAKAKSKTETLPASDLHAAQRYLESLLDSDDPLSPGEIEEIQDSIEGIRRGDMTLTDFEHKHGV
Ga0209581_100060630	3300027706	Surface Soil	MTAKRQLEPSETALHAAQRYLESLLDTDAPLTPGELESVQDSVEQIRQGKMTLEEFERKHGL
Ga0209415_109162882	3300027905	Peatlands Soil	MTAKARNRTEGLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0209698_100130246	3300027911	Watersheds	MTARKEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHG
Ga0209698_105835461	3300027911	Watersheds	MTARKEVLPASDLHAAQRYLESLLDSDQPLSPGEIEEIQESIEGIRRGDMTLADFERKHG
Ga0302232_106321721	3300028789	Palsa	MTDRIEALPESDLHAAQRYLESLLDSDEPLSPGEVEEIQGSVEAIRRGDMTLADFERKHG
Ga0311369_112929661	3300029910	Palsa	PAMTDRIEALPESDLHAAQRYLESLLDSDEPLSPGEVEEIQGSVEAIRRGDMTLADFERKHGV
Ga0316363_102023342	3300030659	Peatlands Soil	MTAKAKNRTEGLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0265339_102839412	3300031249	Rhizosphere	MTDNRVSLPQSDLHSAQRYLETLLDSDEPLSPGEIEEIQESVEAIRRGDMTLAD
Ga0307479_116300891	3300031962	Hardwood Forest Soil	MTAKKEVLPESDLHAAQRYLESLLDSDEPLSPGEIEEIQQSIESIRRGDMTLAEFERKHG
Ga0311301_101326142	3300032160	Peatlands Soil	MTAKAKMKAEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0311301_120766571	3300032160	Peatlands Soil	MTAKAKMKKEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0311301_123052601	3300032160	Peatlands Soil	MTAKAKITTEALPARDLHAAQRYLESLLDSDEPLSPGEIEEIQDSIEGIRRGDMTLTDFEHKHGV
Ga0335085_1000001110	3300032770	Soil	MTTKTDILPESDRHAADRYLESLFDSDEPLAPGEIEQIQDTLAAIRRREMTVVEFERKHG
Ga0335085_10000112163	3300032770	Soil	MTPRKAALPESDLHAAERYLESLLDSDEPLAPGEIEEIQESIEAIRRGEMTVTDFERKHG
Ga0335079_100159808	3300032783	Soil	MTARKEALPESDLHAAQRYLESLLDSDEPLSPGEKESIQDSIEAVRRGEMTLDEFERKHGVEG
Ga0335079_100289994	3300032783	Soil	MTATKQVLPESELHSAQRYLESLLDSDEPLSPGEIEEIQASIERVRRGDMTLAEFERRHG
Ga0335079_114181092	3300032783	Soil	MTARKEGLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQGSIEGIRRGEMTLEDFERKHG
Ga0335078_100133951	3300032805	Soil	MTVRNVLPDRDLHAAERYLESLLDSEEPLSPGELETIEQSIAAIRRGEMTLAEFDRKHGA
Ga0335078_101202845	3300032805	Soil	MTAREEALPESDVHAAQRYLESLLDSDEPLSPGEVEAIQDSIEAIRRGKMTLGEFERKHGVDG
Ga0335078_101420153	3300032805	Soil	MTAKAKVKTDTLPASDVHAAQRYLESLLDSDQPLSPGEIEEIQDSIEGIRRGDMTLADFERKHGV
Ga0335078_101510742	3300032805	Soil	MTARKEVLPASDLHAAQRYLESLLDSDEPLSPGEIEEIQSSIEGIRRGDMTLADFERKHG
Ga0335078_106198612	3300032805	Soil	MTTRTDILPESDRHAADRYLESLLDSDEPLSPGEIEQIQDSIEAIRRREMTVAEFERKHG
Ga0335078_107450442	3300032805	Soil	MPAKSARVQETDLHAAQRYLESLLDSDEPLSPGEIERIQESLESIRSGRMTLSDFERKHGLQE
Ga0335078_109724582	3300032805	Soil	MTAPKPSLQESDVHVAERYLERLLDSDEPSSPGEIEEIQESIAAIRRGEMTLAEFERKHG
Ga0335080_111075222	3300032828	Soil	MASKNEVLPAGDVHAAERYLESLLDSDEPLSPGEIEEIQESIAAIRRGEMTLQEFERKHG
Ga0335069_106498282	3300032893	Soil	MTTRNDVLPESDRHAADRYLESLLDSNEPLSPGEIEQIQDTIAAIRRREMTVVEFERKHG
Ga0335069_106498502	3300032893	Soil	MTTRNDVLPESDRHAADRYLESLLDSDEPLSPGEIEQIQDTIAAIRRREMTVVEFERKHG
Ga0335083_101545533	3300032954	Soil	TKTDILPESDRHAADRYLESLFDSDEPLAPGEIEQIQDTLAAIRRREMTVVEFERKHGD
Ga0335076_109417512	3300032955	Soil	ATKQVLPESELHSAQRYLESLLDSDEPLSPGEIEEIQASIERVRRGDMTLAEFERRHGV
Ga0335077_101235111	3300033158	Soil	MTVRNVLPDRDLHAAERYLESLLDSEEPLSPGELETIEQSIAAIRRGE
Ga0316620_101458132	3300033480	Soil	MTARKEVLPESDLHAAQRYLESLLDSDQPLAPGEIEEIQDSINAIRRGNMTLAEFERKHGVEG
Ga0316624_113239512	3300033486	Soil	MTARKEVLPESDLHAAQRYLESLLDSDQPLAPGEIEEIQDSISAIRQGNMTLAEFERKHGVEG
Ga0334828_010664_3014_3178	3300033822	Soil	MTAKAKSKTEALPAADLHAAQRYLESLLDSDEPLAPGEIEEIQDSIEGIRRGDMT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080968

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences