NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F081078

Metagenome Family F081078

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F081078
Family Type Metagenome
Number of Sequences 114
Average Sequence Length 55 residues
Representative Sequence MEAQEIDFKVIDVVENEDGSATVVLDMDSKAAHAFLSLGVLRAIELGLDELEEQ
Number of Associated Samples 68
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 88.60 %
% of genes near scaffold ends (potentially truncated) 23.68 %
% of genes from short scaffolds (< 2000 bps) 80.70 %
Associated GOLD sequencing projects 43
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (63.158 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(70.175 % of family members)
Environment Ontology (ENVO) Unclassified
(74.561 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(81.579 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.05%    β-sheet: 18.29%    Coil/Unstructured: 53.66%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF13155Toprim_2 5.26
PF04448DUF551 2.63
PF01612DNA_pol_A_exo1 0.88
PF03819MazG 0.88
PF06945DUF1289 0.88
PF08273Prim_Zn_Ribbon 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG3313Predicted Fe-S protein YdhL, DUF1289 familyGeneral function prediction only [R] 0.88
COG4643Uncharacterized domain associated with phage/plasmid primaseMobilome: prophages, transposons [X] 0.88


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A63.16 %
All OrganismsrootAll Organisms36.84 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10116065Not Available976Open in IMG/M
3300004951|Ga0068513_1013587Not Available864Open in IMG/M
3300006025|Ga0075474_10014745All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium TMED2282915Open in IMG/M
3300006025|Ga0075474_10027086All Organisms → Viruses → Predicted Viral2036Open in IMG/M
3300006025|Ga0075474_10038075Not Available1665Open in IMG/M
3300006026|Ga0075478_10165852Not Available684Open in IMG/M
3300006027|Ga0075462_10120523Not Available810Open in IMG/M
3300006802|Ga0070749_10075043All Organisms → Viruses → Predicted Viral2023Open in IMG/M
3300006802|Ga0070749_10164567Not Available1284Open in IMG/M
3300006802|Ga0070749_10404201Not Available753Open in IMG/M
3300006810|Ga0070754_10022290All Organisms → Viruses → Predicted Viral3667Open in IMG/M
3300006810|Ga0070754_10059231All Organisms → Viruses → Predicted Viral1991Open in IMG/M
3300006810|Ga0070754_10077473All Organisms → Viruses → Predicted Viral1684Open in IMG/M
3300006810|Ga0070754_10080670All Organisms → Viruses → Predicted Viral1641Open in IMG/M
3300006810|Ga0070754_10202383All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium924Open in IMG/M
3300006810|Ga0070754_10421262Not Available582Open in IMG/M
3300006810|Ga0070754_10486719Not Available532Open in IMG/M
3300006867|Ga0075476_10083301All Organisms → Viruses → Predicted Viral1246Open in IMG/M
3300006867|Ga0075476_10197254Not Available734Open in IMG/M
3300006868|Ga0075481_10227416Not Available662Open in IMG/M
3300006868|Ga0075481_10244491All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage633Open in IMG/M
3300006868|Ga0075481_10261829Not Available608Open in IMG/M
3300006869|Ga0075477_10121831All Organisms → Viruses → Predicted Viral1104Open in IMG/M
3300006869|Ga0075477_10165930Not Available917Open in IMG/M
3300006916|Ga0070750_10399529Not Available574Open in IMG/M
3300006916|Ga0070750_10446725Not Available535Open in IMG/M
3300006916|Ga0070750_10450819Not Available532Open in IMG/M
3300006919|Ga0070746_10236060Not Available858Open in IMG/M
3300006919|Ga0070746_10275088Not Available780Open in IMG/M
3300007344|Ga0070745_1285215Not Available591Open in IMG/M
3300007344|Ga0070745_1366258Not Available503Open in IMG/M
3300007345|Ga0070752_1020507All Organisms → Viruses → Predicted Viral3354Open in IMG/M
3300007345|Ga0070752_1308230Not Available602Open in IMG/M
3300007345|Ga0070752_1313168Not Available596Open in IMG/M
3300007346|Ga0070753_1129251All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium967Open in IMG/M
3300007346|Ga0070753_1180535Not Available789Open in IMG/M
3300007538|Ga0099851_1053267All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. CMR5c1586Open in IMG/M
3300007538|Ga0099851_1275701Not Available597Open in IMG/M
3300007539|Ga0099849_1174167Not Available821Open in IMG/M
3300007541|Ga0099848_1012211All Organisms → Viruses → Predicted Viral3775Open in IMG/M
3300007541|Ga0099848_1101335All Organisms → Viruses → Predicted Viral1105Open in IMG/M
3300007541|Ga0099848_1128511Not Available952Open in IMG/M
3300007541|Ga0099848_1164248Not Available815Open in IMG/M
3300007541|Ga0099848_1176292Not Available778Open in IMG/M
3300007541|Ga0099848_1333560Not Available514Open in IMG/M
3300007542|Ga0099846_1178736Not Available755Open in IMG/M
3300007542|Ga0099846_1200874Not Available703Open in IMG/M
3300007609|Ga0102945_1036763Not Available1003Open in IMG/M
3300007960|Ga0099850_1133300Not Available1009Open in IMG/M
3300008012|Ga0075480_10371586All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium710Open in IMG/M
3300009000|Ga0102960_1009141Not Available3761Open in IMG/M
3300009000|Ga0102960_1101876All Organisms → Viruses → Predicted Viral1045Open in IMG/M
3300009000|Ga0102960_1198688Not Available715Open in IMG/M
3300009001|Ga0102963_1064115Not Available1512Open in IMG/M
3300009001|Ga0102963_1141588Not Available971Open in IMG/M
3300009001|Ga0102963_1265059Not Available679Open in IMG/M
3300009027|Ga0102957_1207719Not Available703Open in IMG/M
3300009124|Ga0118687_10400178All Organisms → cellular organisms → Bacteria → Proteobacteria530Open in IMG/M
3300010299|Ga0129342_1189041Not Available735Open in IMG/M
3300010318|Ga0136656_1171242Not Available736Open in IMG/M
3300010389|Ga0136549_10291812Not Available680Open in IMG/M
3300017951|Ga0181577_10279525All Organisms → Viruses → Predicted Viral1089Open in IMG/M
3300017963|Ga0180437_10499846Not Available897Open in IMG/M
3300017964|Ga0181589_11021401Not Available500Open in IMG/M
3300017971|Ga0180438_10758354Not Available710Open in IMG/M
3300018080|Ga0180433_10776986Not Available708Open in IMG/M
3300018421|Ga0181592_10027107All Organisms → Viruses → Predicted Viral4652Open in IMG/M
3300021379|Ga0213864_10231267Not Available940Open in IMG/M
3300021958|Ga0222718_10008144Not Available8099Open in IMG/M
3300021958|Ga0222718_10010962All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6735Open in IMG/M
3300021958|Ga0222718_10011671Not Available6481Open in IMG/M
3300021959|Ga0222716_10565059Not Available628Open in IMG/M
3300021964|Ga0222719_10070763All Organisms → Viruses → Predicted Viral2609Open in IMG/M
3300021964|Ga0222719_10680679Not Available584Open in IMG/M
3300022050|Ga0196883_1011695All Organisms → Viruses → Predicted Viral1041Open in IMG/M
3300022057|Ga0212025_1000290All Organisms → Viruses → Predicted Viral3441Open in IMG/M
3300022071|Ga0212028_1017395All Organisms → Viruses → Predicted Viral1230Open in IMG/M
3300022071|Ga0212028_1049416Not Available784Open in IMG/M
3300022158|Ga0196897_1023376Not Available753Open in IMG/M
3300022167|Ga0212020_1000727All Organisms → Viruses → Predicted Viral2899Open in IMG/M
3300022176|Ga0212031_1081167Not Available553Open in IMG/M
3300022198|Ga0196905_1017506All Organisms → Viruses → Predicted Viral2273Open in IMG/M
3300022198|Ga0196905_1024366All Organisms → Viruses → Predicted Viral1865Open in IMG/M
3300025610|Ga0208149_1001327Not Available9180Open in IMG/M
3300025610|Ga0208149_1039601All Organisms → Viruses → Predicted Viral1255Open in IMG/M
3300025646|Ga0208161_1057058Not Available1219Open in IMG/M
3300025646|Ga0208161_1067447All Organisms → Viruses → Predicted Viral1076Open in IMG/M
3300025653|Ga0208428_1053413All Organisms → Viruses → Predicted Viral1221Open in IMG/M
3300025655|Ga0208795_1104290Not Available755Open in IMG/M
3300025671|Ga0208898_1010720All Organisms → Viruses → Predicted Viral4577Open in IMG/M
3300025671|Ga0208898_1013723All Organisms → Viruses → Predicted Viral3883Open in IMG/M
3300025671|Ga0208898_1080219All Organisms → Viruses → Predicted Viral1053Open in IMG/M
3300025671|Ga0208898_1130181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium711Open in IMG/M
3300025674|Ga0208162_1162218Not Available602Open in IMG/M
3300025687|Ga0208019_1189429Not Available547Open in IMG/M
3300025759|Ga0208899_1010273Not Available5250Open in IMG/M
3300025759|Ga0208899_1041258Not Available2056Open in IMG/M
3300025769|Ga0208767_1162377Not Available798Open in IMG/M
3300025771|Ga0208427_1065028All Organisms → Viruses → Predicted Viral1313Open in IMG/M
3300025828|Ga0208547_1054486Not Available1368Open in IMG/M
3300025828|Ga0208547_1067325All Organisms → Viruses → Predicted Viral1180Open in IMG/M
3300025853|Ga0208645_1207551Not Available688Open in IMG/M
3300025853|Ga0208645_1228706Not Available636Open in IMG/M
3300025853|Ga0208645_1263914Not Available564Open in IMG/M
3300025889|Ga0208644_1023810All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3802Open in IMG/M
3300026097|Ga0209953_1019970Not Available1185Open in IMG/M
3300026138|Ga0209951_1112496Not Available554Open in IMG/M
3300026183|Ga0209932_1098855Not Available646Open in IMG/M
3300026187|Ga0209929_1162982Not Available537Open in IMG/M
3300029302|Ga0135227_1030565All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria595Open in IMG/M
3300031578|Ga0307376_10750422Not Available608Open in IMG/M
3300031669|Ga0307375_10608270Not Available643Open in IMG/M
3300034374|Ga0348335_035782All Organisms → Viruses → Predicted Viral2104Open in IMG/M
3300034375|Ga0348336_076572All Organisms → Viruses → Predicted Viral1229Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous70.18%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water10.53%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water5.26%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.63%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment2.63%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.75%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.75%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water0.88%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.88%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.88%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor0.88%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.88%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment0.88%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300004951Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVsEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007609Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017971Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaGEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021379Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022050Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)EnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026097Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026138Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026187Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300029302Marine harbor viral communities from the Indian Ocean - SRB3EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1011606533300000116MarineMEAQEIDFKVVDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLEAQEESE*
Ga0068513_101358723300004951Marine WaterMEAKQFHVEVIDIVENEDGSATVVLDMDSEAARAFLSLGVLRAIEVGLEAAEEAQDAN*
Ga0075474_1001474543300006025AqueousMDAKEFHVEVIDVVENEDGSATLVLDMDSEAARAFLSLGVLRAIEVGLEVAESSNE*
Ga0075474_1002708643300006025AqueousMEAQEIDFKVIDIVDNEDGSATLILDMNSKAAHAFLSLGVLRALELGLETQEESNANL*
Ga0075474_1003807533300006025AqueousMEDKQFHVEVIEVVENEDGSATVVLDMNSEAAHAFLSLGVLRAIEAGLEAAEEAQNAD*
Ga0075478_1016585213300006026AqueousMDAKEFHVEVIDVVENVDGSATVVLDMDSEAARAFLSLGVLRAIEVGLAVAESGDADTHHAKR*
Ga0075462_1012052323300006027AqueousMEAQEIDFKVVDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLEAQEESE*
Ga0070749_1007504343300006802AqueousMEAQEIDFKVIDIVDNEDGSATLILDMNSKAAHAFLSLGVLRALELGLETQECEEEEQ*
Ga0070749_1016456733300006802AqueousMNTQNEQFNVKVLEVIENDDGSATLVLDMDSKAAQAFLSLGVLRAIQLGLDATEEEHE*
Ga0070749_1040420133300006802AqueousMEAQEIDFKVVDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLETQEEQ*
Ga0070754_1002229043300006810AqueousMEDKQFHVEVIEVVENEDGSATVVLDMNSKAAHAFLSLGVLRAIEAGLEAAEEAQNAD*
Ga0070754_1005923143300006810AqueousMEAQEIDFKVIDVVENEDGSATVVLDMDSKAAHAFLSLGVLRAIELGLDELEEQ*
Ga0070754_1007747323300006810AqueousMEAKEFHVEVIDVVENEDGSATVVLDMDSEAARAFLSLGVLRAIEVGLEATESGDADTHHAKR*
Ga0070754_1008067073300006810AqueousMESQEFDVKVIDVVENEDGSATVVLDMDSKAAHAFLSMGVLRAIELGLDELEER*
Ga0070754_1020238323300006810AqueousMEAKEFHVEVIDVVENEDGSATVVLDMDSKAAQAFLSLGVLRAIQLGLDATEEEQ*
Ga0070754_1042126223300006810AqueousMDAKEFHVEVIDVFENEDGSATVVLDMDSKAAHTFLSLGVLRAIELGIEATEEAQDAD*
Ga0070754_1048671923300006810AqueousMEAQKFDVEVIDVVENEDGSATVVLDMDSKAAHAFLSLGVLRAIELGLDELEESE*
Ga0075476_1008330113300006867AqueousMEAQEIDFKVIDIVDNEDGSATLILDMNSKAAHAFLSLGVLRALELGLEAQECEEEGEHGTTHHAKG*
Ga0075476_1019725423300006867AqueousMEAKEFHVEVIDVFENEDGSATVVLDMDSKAAQAFISLGVLRAIEVGLEVAEEAQDAN*
Ga0075481_1022741613300006868AqueousMEAQEIDFKVIDIVDNEDGSATLILDMNSKAAHAFLSLGVLRALELGLETQEESNA
Ga0075481_1024449133300006868AqueousDAKEFHVEVIDIVENEDGSATVVLDMDSEAARAFLSLGVLRAIEVGLEVAESSNE*
Ga0075481_1026182913300006868AqueousMESQKFDVEVIDVVENEDGSATVVLDMDSKAAHLFLSLGVLRAIELGLDGLEEQ*
Ga0075477_1012183143300006869AqueousMEAQEIDFKVIDIVDNEDGSATLVLDMNSKAAHAFLSL
Ga0075477_1016593033300006869AqueousMEAQEIDFKVIDVVENEDGSATVVLDMGSKAAHLFLSLGVLRAIELGLDGLEEQ*
Ga0070750_1039952923300006916AqueousMEAQKFDVEVIDVVENEDGSATVVLDMDSKAAHAFLSLGVLRAIELGLDELEEQ*
Ga0070750_1044672513300006916AqueousMEAQEIDFKVVDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGL
Ga0070750_1045081913300006916AqueousWMEGGGAVMEAQELDFKVVDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLDELEESE*
Ga0070746_1023606043300006919AqueousMDAKEFHVEVIDVVENVDGSATVVLDMDSEAARAFLSLGVLRAIEVGLA
Ga0070746_1027508813300006919AqueousMEAQEIDFKVVDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLETQECEE
Ga0070745_128521513300007344AqueousMEAQEIDFKVVDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELG
Ga0070745_136625813300007344AqueousVIDVVENEDGSATVVLDMDSKAAHALLSLGVLRAIELGLDGLEEQ*
Ga0070752_1020507143300007345AqueousMEAQEIDFKVIDVVENEDGSATVVLDMDSKAAHAFLSLGVLRAIELG
Ga0070752_130823013300007345AqueousMESQKFDVEVIDVVENEDGSATVVLDMDSKAAHLFLSLGVLRAIELGLDELE
Ga0070752_131316823300007345AqueousMEPEDFNVKVLEVIENDDGSATLVLDMDSKAAQAFLSLGVLRAIQLGLDATEEEHE*
Ga0070753_112925133300007346AqueousMDAKEFHVEVIDVVENEDGSATVVLDMDSKAAQAFLSLGVLRAIQLGLDATEEEQ*
Ga0070753_118053543300007346AqueousMDAKEFHVEVIDIVENEDGSATVVLDMDSEAARAFLSLGVLRAIEVGLEVAESSDADTHHAKR*
Ga0099851_105326743300007538AqueousMESQKFDVEVIDVVENEDGSATVVLDMDSKAAHLFLSLGVLRAIELGLDELEEQ*
Ga0099851_127570133300007538AqueousMEAQEIDFKVIDVVDNEDGSATVVLDMDSKAAHAFLSLGVLRAIELGLDELEEQ*
Ga0099849_117416733300007539AqueousMEAQEIDFKVIDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLETQEEQ*
Ga0099848_1012211113300007541AqueousMMESQKFDVEVIDVVENEDGSATVVLDMGSKAAHAFLSLGVLRAIELGLDELEEQ*
Ga0099848_110133533300007541AqueousMEAQEIDFKVIDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRTLELGLEAQEREEESE*
Ga0099848_112851123300007541AqueousMESQKFDVEVIDVVENEDGSATVVLDMDSKAAHAFLSLGVLRAIELGLDELEESE*
Ga0099848_116424833300007541AqueousQKFDVEVIDVVENEDGSATVVLDMDSKTAHAFLSMGVLRAIELGLDELEES*
Ga0099848_117629243300007541AqueousMEAQEIDFKVVDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLAELEESE*
Ga0099848_133356013300007541AqueousMEAQEIDFKVVDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLETQEESDANL*
Ga0099846_117873633300007542AqueousMESQKFDVEVIDVVENEDGSATVVLDMGSKAAHAFLSLGVLRAIELGLDELEEQ*
Ga0099846_120087413300007542AqueousMEAQKFGVEVIDVAENEDGSATVVLDMDSKAAHAFLSLGVLR
Ga0102945_103676333300007609Pond WaterMEAQGFHVEVIDVVENEDGSATVVLDMDSKAAHTFLSLGVLHAIEIGLEATEEGNE*
Ga0099850_113330053300007960AqueousMEAQEIDFKVIDVVENEDGSATVVLDMDSKAAHAFLSLGVLRAIELGLDELEESEE*
Ga0075480_1037158613300008012AqueousEFHVEVIDVVENEDGSATVVLDMDSKAAQAFLSLGVLRAIQLGLDATEEEQ*
Ga0102960_1009141123300009000Pond WaterMNTQNEQFNVEVLEVIENEDGSATLVLDMDSKAVQAFLSLGVLRAIQLGLDATEEEQ*
Ga0102960_110187643300009000Pond WaterMEAQEFHVEVIDIVENEDGSATVVLDMNSKAAHAFLSLGVLRAIEVGLEATEEEQ*
Ga0102960_119868833300009000Pond WaterMEKITQDFDIKVIEVIENDDGSATLVLDMDSKAAQAFLSLGVLHAIRLGLDATEEEQ*
Ga0102963_106411553300009001Pond WaterMNTQNEQFNVEVVDVVENEDGSATLVLDMDSKAVQAFLSLGVLRAIQLGLDATEEEQ*
Ga0102963_114158833300009001Pond WaterMEAQEMDFKVVDIIDNEDGSASLVLDMNSEAAHAFLSLGVLRALELGLEALECEEESE*
Ga0102963_126505923300009001Pond WaterMEAKEFHVEVIDIVENEDGSATVVLDMDSKAAHTFLSLGVLRAIELGIEATEEEQ*
Ga0102957_120771933300009027Pond WaterMDAKEFHVEVIDVVENEDGSATLVLDMDSEAARAFLSLGVLRAIQLGLDATEEEQ*
Ga0118687_1040017813300009124SedimentVIDIVENEDGSATVVLDMDSKAAHTFLSLGVLRAIELGIEATEEEQ*
Ga0129342_118904133300010299Freshwater To Marine Saline GradientMEAQEIDFKVIDIVDNEDGSATLVLDMDSKAAHAFLSLGVLRAIELGLDALEER*
Ga0136656_117124233300010318Freshwater To Marine Saline GradientMESQKFDVEVIDVVENEDGSATVVLDMGSKAAHAFLSLGVLRAIELGLDALEER*
Ga0136549_1029181233300010389Marine Methane Seep SedimentVIDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLGAQEREEESK*
Ga0181577_1027952553300017951Salt MarshMEAQEIDFKVVDIVDNEDGSATLVLDMNSKAAHAFLSLG
Ga0180437_1049984633300017963Hypersaline Lake SedimentMESKQFNVEVIDVIENEDGSATVVLDMGSKAAHLFLSMGVLRAIELGLDELEER
Ga0181589_1102140123300017964Salt MarshMEAQEIDFKVVDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLETQEESNANL
Ga0180438_1075835433300017971Hypersaline Lake SedimentMESKQFNVEVIDVIENEDGSATVVLDMGSKAAHLFLSMGVLRAIELGLDALEER
Ga0180433_1077698643300018080Hypersaline Lake SedimentMEAQEFGVKVIDVVENEDGSATVVLDMDSKAAHALLSLGVLRAIELGLDELEES
Ga0181592_1002710773300018421Salt MarshMEAQEIDFKVIDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLETQEEQ
Ga0213864_1023126723300021379SeawaterMEAQEIDFKVIDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLEAQECEEEEQ
Ga0222718_10008144113300021958Estuarine WaterMKEITQDFDIKVIEVIENDDGSATLVLDMDSKAAQAFLSLGVLRAIQLGLDATENGDEQN
Ga0222718_10010962143300021958Estuarine WaterMDAKEFHVEVIDVVENEDGSATLVLDMDSEASRAFLSLGVLRAIEVGLEVAESSNE
Ga0222718_1001167153300021958Estuarine WaterMDAKEFHVEVIDVFENEDGSATVVLDMDSKAAHTFLSLGVLRAIELGIEATEEAQDAD
Ga0222716_1056505923300021959Estuarine WaterMDAKEFHVEVIDVVENEDGSATLVLDMDSKAAQAFLSLGVLRAIQLGLDATENGDEQNP
Ga0222719_1007076353300021964Estuarine WaterMDAKEFHVEVIDVVENEDGSATLVLDMDSEAASAFLSLGVLRAIEVGLEVAESSNE
Ga0222719_1068067933300021964Estuarine WaterMEAQEMDFKVVDIIDNEDGSASLVLDMNSEAAHAFLSLGVLRALELGLEALEC
Ga0196883_101169543300022050AqueousMDAKEFHVEVIDVVENEDGSATLVLDMDSEAARAFLSLGVLRAIEVGLEVAESSNE
Ga0212025_100029053300022057AqueousMEAQEIDFKVIDIVDNEDGSATLILDMNSKAAHAFLSLGVLRALELGLETQEESNANL
Ga0212028_101739553300022071AqueousMDAKEFHVEVIDVVENVDGSATVVLDMDSEAARAFLSLGVLRAIEVGLAVAESGDADTHHAKR
Ga0212028_104941623300022071AqueousMEAQEIDFKVVDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLETQEESNANL
Ga0196897_102337613300022158AqueousMDAKEFHVEVIDVVENEDGSATLVLDMDSEAARAFLSLGVLRAIEVGLEVAE
Ga0212020_100072763300022167AqueousMEAKEFHVEVIDVVENEDGSATLVLDMDSEAARAFLSLGVLRAIEVGLEVAESSNE
Ga0212031_108116723300022176AqueousMEAQEIDFKVIDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRTLELGLEAQEREEESE
Ga0196905_101750643300022198AqueousMEAQEIDFKVVDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLAELEESE
Ga0196905_102436623300022198AqueousMEAQKFDVEVIDVVENEDGSATVVLDMDSKAAHAFLSLGVLRAIELGLDELEESE
Ga0208149_100132783300025610AqueousMEDKQFHVEVIEVVENEDGSATVVLDMNSEAAHAFLSLGVLRAIEAGLEAAEEAQNAD
Ga0208149_103960123300025610AqueousMEAQEIDFKVIDIVDNEDGSATLILDMNSKAAHAFLSLGVLRALELGLEAQEESE
Ga0208161_105705813300025646AqueousMEAQEIDFKVIDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLETQE
Ga0208161_106744723300025646AqueousMESQKFDVEVIDVVENEDGSATVVLDMGSKAAHAFLSLGVLRAIELGLDELEEQ
Ga0208428_105341353300025653AqueousMEAQEIDFKVIDIVDNEDGSATLILDMNSKAAHAFLSLGVLRALELGLETQEESNAN
Ga0208795_110429033300025655AqueousMESQKFDVEVIDVVENEDGSATVVLDMDSKAAHLFLSLGVLRAIELGLDELEEQ
Ga0208898_101072063300025671AqueousMEAQEIDFKVIDVVENEDGSATVVLDMDSKAAHAFLSLGVLRAIELGLDELEEQ
Ga0208898_101372363300025671AqueousMEAKEFHVEVIDVVENEDGSATVVLDMDSEAARAFLSLGVLRAIEVGLEATESGDADTHHAKR
Ga0208898_108021933300025671AqueousMMETQEFDFKVIDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLEAQEESEHGLD
Ga0208898_113018133300025671AqueousMEAKEFHVEVIDVVENEDGSATVVLDMDSKAAQAFLSLGVLRAIQLGLDATEEEQ
Ga0208162_116221823300025674AqueousMEAQKFDVEVIDVVENEDGSATVVLDMGSKAAHAFLSLGVLRAIELGLDELEER
Ga0208019_118942923300025687AqueousMEAQEIDFKVIDVVENEDGSATVVLDMDSKAAHAFLSLGVLRAIELGLDELEESEE
Ga0208899_101027363300025759AqueousMEAQEIDFKVVDIVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLEAQEESE
Ga0208899_104125853300025759AqueousMNTQNEQFNVKVLEVIENDDGSATLVLDMDSKAAQAFLSLGVLRAIQLGLDATEEEHE
Ga0208767_116237713300025769AqueousMEAQEIDFKVVDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLETQECEEEEQ
Ga0208427_106502843300025771AqueousMEAQEIDFKVIDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLEAQEESEHGLD
Ga0208547_105448633300025828AqueousMEAKEFHVEVIDVFENEDGSATVVLDMDSKAAQAFISLGVLRAIEVGLEVAEEAQDAN
Ga0208547_106732553300025828AqueousMEAQEIDFKVIDIVDNEDGSATLILDMNSKAAHAFLSLGVLRALELGLETQE
Ga0208645_120755133300025853AqueousMESQEFDVKVIDVVENEDGSATVVLDMDSKAAHAFLSMGVLRAIELGLDELEER
Ga0208645_122870613300025853AqueousGAMMETQEIDFKVVDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLEAQEESEHGLD
Ga0208645_126391413300025853AqueousMMETQEFDFKVIDVVDNEDGSATLVLDMNSKAAHAFLSLGV
Ga0208644_1023810133300025889AqueousMRKQNEEIDFKVVDVVDNEDGSATLVLDMNSKAAHAFLSLGVLRALELGLETQECEEEEQ
Ga0209953_101997043300026097Pond WaterMEAQGFHVEVIDVVENEDGSATVVLDMDSKAAHTFLSLGVLHAIEIGLEATEEGNE
Ga0209951_111249613300026138Pond WaterMDAKEFHVEVIDVVENEDGSATLVLDMDSEAARAFLSLGVLRAIQLGLDATEEEQ
Ga0209932_109885523300026183Pond WaterMNTQNEQFNVEVLEVIENEDGSATLVLDMDSKAVQAFLSLGVLRAIQLGLDATEEEQ
Ga0209929_116298213300026187Pond WaterMDAKEFHVEVIDVVENEDGSATLVLDMDSEAARAFLSLGVLRAIQLGLDAT
Ga0135227_103056533300029302Marine HarborMEAKEFHVEVIDVVENEDGSATVVLDMDSKAAQAFLSLGVLRAIQLGLDATEEEHE
Ga0307376_1075042223300031578SoilMEAQEMDFKVVDIFDNEDGSATLVLEMNNEAAHAFLSLGVLGALEAGLDAANSSEEEQQ
Ga0307375_1060827033300031669SoilKEMDFKVVDIFDNEDGSATLVLEMNSEAAHAFLSFGVLRALELGLEAQESEEESE
Ga0348335_035782_1154_13513300034374AqueousMEGGGAVMEAQEIDFKVIDIVDNEDGSATLILDMNSKAAHAFLSLGVLRALELGLETQEESNANL
Ga0348336_076572_2_1483300034375AqueousDVEVIDVVENEDGSATVVLDMDSKAAHLFLSLGVLRAIELGLDELEEQ


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