NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F081403

Metagenome / Metatranscriptome Family F081403

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F081403
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 103 residues
Representative Sequence MNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTDSCCQMESCCTDDSCDMKKEGEANSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNMKNKDKNK
Number of Associated Samples 88
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 86.73 %
% of genes near scaffold ends (potentially truncated) 42.98 %
% of genes from short scaffolds (< 2000 bps) 82.46 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (61.404 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(9.649 % of family members)
Environment Ontology (ENVO) Unclassified
(61.404 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(71.930 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.
1ICChiseqgaiiDRAFT_22070192
2JGI11643J11755_112497262
3JGI11615J12901_113049651
4JGI11615J12901_146878561
5JGI12363J15224_10008916
6soilL1_1000048529
7soilH2_101556442
8Ga0058693_10796841
9Ga0063356_1018368802
10Ga0062595_1016153531
11Ga0065714_102077831
12Ga0065712_104079492
13Ga0065715_102781171
14Ga0065715_103701992
15Ga0065715_104272102
16Ga0065705_101648254
17Ga0070670_10000033124
18Ga0070670_1000095929
19Ga0070670_1002096824
20Ga0070687_1000263795
21Ga0070661_1017389321
22Ga0070669_1007416481
23Ga0070688_1008318811
24Ga0070667_1014740582
25Ga0070700_1003909822
26Ga0070663_1012133531
27Ga0070678_1012353372
28Ga0068853_1004049704
29Ga0070686_1004350012
30Ga0070704_1000480925
31Ga0070704_1007600221
32Ga0070704_1018533821
33Ga0068857_1015631021
34Ga0068854_1000783183
35Ga0068859_1004440571
36Ga0068859_1013749001
37Ga0068864_1008724381
38Ga0068864_1013276071
39Ga0068864_1015246782
40Ga0068866_106358141
41Ga0068851_109029062
42Ga0068863_1003473822
43Ga0068863_1017163131
44Ga0068871_1009218502
45Ga0068865_1005756612
46Ga0105240_118437141
47Ga0105245_118957131
48Ga0105247_108198512
49Ga0105247_114388432
50Ga0105243_101753504
51Ga0105243_102957981
52Ga0105241_100734774
53Ga0105248_116052701
54Ga0105238_100074829
55Ga0126313_110075932
56Ga0126315_100914794
57Ga0126315_102691962
58Ga0126309_109869441
59Ga0126314_114700071
60Ga0126310_103905671
61Ga0126311_100341972
62Ga0126311_109548812
63Ga0126316_11073632
64Ga0126320_12907471
65Ga0126377_111738421
66Ga0105239_112407462
67Ga0134124_100606286
68Ga0134124_125419062
69Ga0134127_101362974
70Ga0105246_110319521
71Ga0105246_112565832
72Ga0105246_123063062
73Ga0126317_108724232
74Ga0127502_108451551
75Ga0150985_1218452052
76Ga0157378_122639942
77Ga0163162_101751855
78Ga0157377_108557062
79Ga0190274_101862852
80Ga0190274_137034461
81Ga0207710_1000043627
82Ga0207688_104766181
83Ga0207645_106318451
84Ga0207654_101541091
85Ga0207654_104331842
86Ga0207654_106690861
87Ga0207671_104536972
88Ga0207662_100382225
89Ga0207662_101982933
90Ga0207694_100019296
91Ga0207650_10000011325
92Ga0207650_101813994
93Ga0207650_104141601
94Ga0207650_109493591
95Ga0207650_110222701
96Ga0207706_105010832
97Ga0207709_101104581
98Ga0207711_118050102
99Ga0207689_105417011
100Ga0207640_103123061
101Ga0207658_112579101
102Ga0207703_101434631
103Ga0207678_119392061
104Ga0207676_104095121
105Ga0207674_103954824
106Ga0207698_117475471
107Ga0208338_100004430
108Ga0209795_101110321
109Ga0268264_104298841
110Ga0307408_1002474402
111Ga0310813_110050542
112Ga0310900_104189172
113Ga0314780_073500_449_733
114Ga0314784_090310_2_328
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 24.62%    β-sheet: 0.00%    Coil/Unstructured: 75.38%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100MNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTDSCCQMESCCTDDSCDMKKEGEANSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNMKNKDKNKSequenceα-helicesβ-strandsCoilSS Conf. scoreSignal Peptide
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
38.6%61.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Switchgrass Rhizosphere
Soil
Sugarcane Root And Bulk Soil
Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Agave
3.5%7.0%3.5%3.5%4.4%4.4%6.1%8.8%4.4%6.1%7.9%9.6%3.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_220701923300000033SoilMNPRKHTFLILLLGLLLVAFAAVSAQTPSQGDQKKKTESCCAMESCCNDDSCDMKKEGEANAEGKHDCCGESCDMKKHDEKMKHDKDGKHECCNIKDKNKKKNT*
JGI11643J11755_1124972623300000787SoilMNPRKHTFLILLLGLLLVEFAAVSAQTPSQGDQKKKTESCCAMESCCNDDSCDMKKEGEANAEGKHDCCGESCDMKKHDEKMKHDKDAKHECCNIKDKNKKKNT*
JGI11615J12901_1130496513300000953SoilMKPRKNTILILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMESCCDKDSCEMKKEGEANAEGKHDCCGDSCDMSKHDAKMKHDKDAKADCCNIKNKNKNKKKVA*
JGI11615J12901_1468785613300000953SoilMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCADDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDAKMKHDKDAKGECCN
JGI12363J15224_100089163300001464SoilMNPRKNTFLILLLGLLLVAFSAVTAQTPSQGEQKNKTESCCQTDSCCTDDSCDMKKEGEANSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNSMKSKKNKKVT*
soilL1_10000485293300003267Sugarcane Root And Bulk SoilMKPRKNISLILLLGLLLFAFAVVMAQTPSQGEQKKKSESCCSMESCCKDDSCEMMKKEGEANAEGKPDCCGDSCDMMKHDEKMKHDKDAKADCCNIKNKNKNKKKAA*
soilH2_1015564423300003324Sugarcane Root And Bulk SoilMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCAMDSCCTGDSCDMKKDGEANSQGSEGKHDCCGDSCDMAKHDAKMKHDKDAKGECCNMKNKDKNKKKNT*
Ga0058693_107968413300003857AgaveMKPLKNLIPVILLGLLLVAFAAVSAQTPSQGDQKKKSESCCAMESCCTGDSCEMKKDGETNAEGKHSCCNGESCDMKNHGEKMKHEK
Ga0063356_10183688023300004463Arabidopsis Thaliana RhizosphereMKSRKNTILILLLGLLLVAFAVVSAQTPSQGEQKKNAEACCSMESCCHDGSCEMKKDGTAKTEGKGSCCADSCDMAKHDANMKHDKDAKHECCNVKNKDKKKKDG*
Ga0062595_10161535313300004479SoilMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTESCCQMESCCTDDSCDMKKEGEANSQGSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNSMKNKKNKKVT*
Ga0065714_1020778313300005288Miscanthus RhizosphereMNPRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCKDGSCDMKKEGEANAEGKHDCCSGDSCDMMKNHDAKMKHDKDAKGECCNMKNKDKNKKKDT*
Ga0065712_1040794923300005290Miscanthus RhizosphereMKPRKNIILILLLGLLLAAFAAVTAQTPAQGEQKKKAEACCSMESCCSDNSCEMKKEGEANAEGKHDCCGDSCDMKKHDAKMKHDKDAGHDCCNMKNKDKSKKKVA*
Ga0065715_1027811713300005293Miscanthus RhizosphereMKPRKNTILILLLGLLLVAFAAVTAQTPAQGEQKKKAEACCSMESCCSDSSCEMKKEGEANAEGKHDCCGDSCDMKKHDAKMKHDKDAKHDCCNMKSKNKKKVA*
Ga0065715_1037019923300005293Miscanthus RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDAKGECCNMKNKDKSKKKNT*
Ga0065715_1042721023300005293Miscanthus RhizosphereGLLLAAFAAVTAQTPAQGEQKKKAEACCSMESCCSDNSCEMKKEGEANAEGKHDCCGDSCDMKKHDAKMKHDKDAGHDCCNMKNKDKSKKKVA*
Ga0065705_1016482543300005294Switchgrass RhizosphereMNPRKNPFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCDKDSCDMKKEGEANAQGSEGKHDCCGDSCDMSKHDEKMKHDKDAKGDCCNMKNKDKNKKKDT*
Ga0070670_100000331243300005331Switchgrass RhizosphereMNPRKHTFLILLLGLLLVAFAAVSAQTPSQGDQKKKTESCCAMKSCCNDDSCDMKKEGEANAEGKHDCCGESCDMKKHDEKMKHDKDAKHECCNIKDKNKKKNT*
Ga0070670_10000959293300005331Switchgrass RhizosphereMKPRKNTILILLLGLLLVAFAAVAAQTPSQGEQKKNAEACCSMESCCHDGSCEMKKDGTAKTEGKGSCCGDSCDMEKHDAKMKHDKDGKHECCNIKNKDKNKTKKVA*
Ga0070670_10020968243300005331Switchgrass RhizosphereMKPLKNTIPAILLGLILAVFAAVPAQTTSQGDQKKKTESCCAMESCCNGESCEMKKDGTANSEGKESCCDGESCNMKMKHDAKKHDKDAKADCCNIKNKKGKKAA*
Ga0070687_10002637953300005343Switchgrass RhizosphereMKPRKNTILILLLGLLLVAFSVVSAQTPAQGDQKKNAEACCSMESCCKGDSCEMKKEGQANSEAKHDCCGDSCDMKKHDENMKHDKDAKHECCNIKNKDKKKVA*
Ga0070661_10173893213300005344Corn RhizosphereMNPRKYTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCKDDSCDMKKDGEANSEGSAGKHDCCGDSCDMIKKHDAKMKHDKDAKSD
Ga0070669_10074164813300005353Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTESCCAMDSCCSEDACDMKKEGEANSQGSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNSMKNKKNKKVT*
Ga0070688_10083188113300005365Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCQMESCCTGDSCDMKKEGEANSQGSEGKHDCCADSCDMTKHDAKMKHDKDAKGECCNSMKNKKNKKVT*
Ga0070667_10147405823300005367Switchgrass RhizosphereMNPRKNTFLIFLLGLLLVAFSAVAAQTPSQGEQKKKTESCCAMDSCCSEDACDMKKEGEANSQGSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNSMKNKKNKKVT*
Ga0070700_10039098223300005441Corn, Switchgrass And Miscanthus RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMKKHDEKMKHD
Ga0070663_10121335313300005455Corn RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDAKGECCNSMKNKKNKKVT*
Ga0070678_10123533723300005456Miscanthus RhizosphereMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTDSCCQMESCCTDDSCDMKKEGEANSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNMKNKDKNK
Ga0068853_10040497043300005539Corn RhizosphereMNPRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCKDGSCDMKKEGEANAEGKHDCCSGDSCDMMKNHDAKMKHDKDAK
Ga0070686_10043500123300005544Switchgrass RhizosphereMKPRKNTILILLLGLLLVAFSVVSAQTPAQGDQKKNAEACCSMESCCKGDSCDMKKEGAANSEAKHDCCGDSCDMKKHDENMKHDKDAKHECCNIKNKDKRRSRKAA*
Ga0070704_10004809253300005549Corn, Switchgrass And Miscanthus RhizosphereMNLRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMESCCTDDSCEMKKEGEANAEGKHDCCGESCDMKNHDEKMKHDKDGKHECCNIKNKDKNKKKDT*
Ga0070704_10076002213300005549Corn, Switchgrass And Miscanthus RhizosphereMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTDSCCQMESCCTDDSCDMKKEGEANSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNMK
Ga0070704_10185338213300005549Corn, Switchgrass And Miscanthus RhizosphereAQFGRNIKPLENRRTTMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDNSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDAKGECCNMKNKDKSKKKNT*
Ga0068857_10156310213300005577Corn RhizosphereMNPRKNTFLILLLGLLLIAFSAVAAQTPSQGEQKKKTDSCCQMESCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMKKHDAKMKHDKDAKGECCNSMKNKKNKKVT*
Ga0068854_10007831833300005578Corn RhizosphereMNFRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMESCCTGDSCDMKKEGEANSEAKHDCCGESCDMKKHDEKMKHDKDGKHECCNVKDKNKKKTT*
Ga0068859_10044405713300005617Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDAKGECCNMKNKDKSKKK
Ga0068859_10137490013300005617Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCKDGSCDMKKEGEANAEGKHDCCSGDSCDMMKNHDAKMKHDKDAKGECCNMKNKDKNKKKD
Ga0068864_10087243813300005618Switchgrass RhizosphereLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDAKGECCNMKNKDKSKKKNT*
Ga0068864_10132760713300005618Switchgrass RhizosphereMKPRKNTILILLLGLLLVAFAAVSAQTPAQGEQKKNTEACCSMESCCSDDSCDMKKDGTAKTEGKDCCGDSCDMEKHDAKMKHDKDAKH
Ga0068864_10152467823300005618Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCAMDSCCANDSCDMKKEGEANSQGSEGKHDCCGESCDMAKHDAKMKHDKDAKGECCNMKNKDK
Ga0068866_1063581413300005718Miscanthus RhizosphereSLENRRTTMNPRKNTFLILLLGLLLVAFSVAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDAKMKHDKDAKGECCNMKNKDKNKKKDT*
Ga0068851_1090290623300005834Corn RhizosphereMNPRKNTILILLLGLLLIAFAAVSAQTPPQGEQKKTTEACCAKDSCCNDDSCEMKKEGEANSEAKHDCCGDSCDMKMKHDEKMKHDKDARHECCNMKNKSKTKKTA*
Ga0068863_10034738223300005841Switchgrass RhizosphereMNSRKNTILILLLGLLLVAFVAVSAQTPPQGEQKKTTEACCAKDSCCNDDSCEMKKEGEANSEAKHDCCGDSCDMKMKHDAKMKHDKDARHECCNMKNKSKTKKTA*
Ga0068863_10171631313300005841Switchgrass RhizosphereMNPRKNTFLIFLLGLLLVAFSAVAAQTPSQGEQKKKTESCCAMDSCCSEDSCDMKKEGEANSQGSEGKHDCCGDSCDMTKHDAKMKHDKDAKGECCNMKNKDKNKKKNT*
Ga0068871_10092185023300006358Miscanthus RhizosphereMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTESCCQMESCCTDDSCDMKKEGEANSQGSEGKHDCCADSCDMTKHDAKMKHDKDAKGECCNMKNKDKNKKKDT*
Ga0068865_10057566123300006881Miscanthus RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDAKMK
Ga0105240_1184371413300009093Corn RhizosphereMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDAKGECCNMKNKDKSKKKNT*
Ga0105245_1189571313300009098Miscanthus RhizosphereNTKSLENRRTTMNPRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCKDGSCDMKKEGEANAEGKHDCCSGDSCDMMKNHDAKMKHDKDAKGECCNMKNKDKNKKKDT*
Ga0105247_1081985123300009101Switchgrass RhizosphereMNPRKNTILILLLGLLLVAFSAASAQTPAQGDQKKDAEACCAKDSCCKDDSCEMKKEGEANSEAKHDCCGDSCDMKKHDENMKHDKDAKHECCNMKNKSKTKKTA*
Ga0105247_1143884323300009101Switchgrass RhizosphereKNTILILLLGLLLVAFSVVSAQTPAQGDQKKNAEACCSMESCCKDDSCEMKKEGEANSEAKHDCCGDSCDMKKHDENMKHDKDAKHECCNIKNKDKKKKVA*
Ga0105243_1017535043300009148Miscanthus RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDAKMKHDKDAKGECCNMKNKDKSKKKNT*
Ga0105243_1029579813300009148Miscanthus RhizosphereMKPRKNTVLILLLGLLLFAFAAVTAQTPAQGEQKKKAEACCSMESCCSDSSCEMKKEGEANAEGKHDCCGDSCDMKKHDAKMKHDKDAKHDCCNMKSKNKKKVA*
Ga0105241_1007347743300009174Corn RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTEDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDAKMKHDKDAKGECCNMKNKDKNKKKNT*
Ga0105248_1160527013300009177Switchgrass RhizosphereMNPRKYTFLILLLGLLLVAFAAVSAQTPSQSEQKKKTESCCAMDSCCKDDSCDMKKEGEANSEGSAGKHDCCGDSCDMMKKHDAKMKHDKDAKSDCCNAKNKDKKKDT*
Ga0105238_1000748293300009551Corn RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCQMDSCCTGDSCDMKKEGEANSQGSEAKHDCCGDSCDMMKHDAKMKHDKDAKGECCNMKNKDKNKKKNT*
Ga0126313_1100759323300009840Serpentine SoilMKPRKNTILILLLGLLLVAFAAVSAQTPSQGEQKKNGEACCSMESCCHDDSCEMKKEGTAKTEGKDSCCSESCDMQIKHDAKMKHD
Ga0126315_1009147943300010038Serpentine SoilMNPRKNTFVILLLGLLLVAFSAVVAQTPSQGEQKKKTESCCQMESCCTDDSCDMKKEGEANSEAKHDCCGDSCDMKKHDAKMKHDNDAKGECCNMKNKDKNKKKNT*
Ga0126315_1026919623300010038Serpentine SoilMKPRKNTILILLLGLLLIAFAVATAQTPSQGEQKKNAEACCSMESCCRDDSCEMKKEGTAKTDGKGSCCSDSCDMEKHDAKMKHDKDSKHECCNIKNKDKKKKVA*
Ga0126309_1098694413300010039Serpentine SoilMKPHKNTILILLLGLLLVAFAVVTAQTPSQGEQKKNAEACCSMESCCHDGSCEMKKEGTAKTEGGSCCSDSCDMEKHDAKMKHDKDSKHECCNIKNKDKKKKVA*
Ga0126314_1147000713300010042Serpentine SoilVGASTGMRNLNSLENRRTTMKPRKNTILILLLGLLLVVFAAVSAQTPSQGEQKKNGEACCSMESCCHDGTCEMKKDGTAKTEGKGSCCSDSCDMEKHDAKMKHDKDAKHDCCNIKNKDKNKTRKAA*
Ga0126310_1039056713300010044Serpentine SoilMKPRKNTVLILLLGLLLVAFAAVSAQTPAQGDEKKKAEACCSMESCCDKDSCEMKKEGEANTEGKHDCCGDSCDMKKHDAKMKHDKDAKDECCNMKHTDKNKKKTA*
Ga0126311_1003419723300010045Serpentine SoilMKSLKNLIPIFILGLLLVAFAAVSAQTPSQGEQKKKAESCCAMDSCCTGDSCEMKKDGEANAESKHDCCAESCDMDMKHDAKMKHDKDGKGECCNVKNKKNKVKKVA*
Ga0126311_1095488123300010045Serpentine SoilKNTILILLLGLLLVVFAAVSAQTPSQGEQKKNGEACCSMESCCHDGTCEMKKDGTAKTEGKGSCCSDSCDMEKHDAKMKHDKDAKHDCCNIKNKDKNKTRKAA*
Ga0126316_110736323300010110SoilMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTDSCCQMESCCTDDSCDMKKDGEANSEAKHDCCGESCDMKKHDAKMKHDKDAKGECCNMK
Ga0126320_129074713300010146SoilMNPRKYTFLILLLGLLLIAFAAVSAQTPSQGEQKKKTESCCAMDSCCRDDSCDMKKEGEANSEGAAGKHDCCGDSCDMMKKDDAKMKHDKDAKSDCCNAKNKDKNKKNDT*
Ga0126377_1117384213300010362Tropical Forest SoilMKPRKNTILILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMESCCDKDSCEMKKEGEANAEGKHDCCADSCDMTKHDAKMKHDKDAKGDCCNLKTKDKNKKKVA*
Ga0105239_1124074623300010375Corn RhizosphereMNFRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCTGDSCDMKKDGEANSEAKHDCCGESCDMKKHDEKMKHD
Ga0134124_1006062863300010397Terrestrial SoilMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTDSCCQMESCCTDDSCDMKKEGEANSEGKHDCCGESCDMKKHDAKMKHDKDA
Ga0134124_1254190623300010397Terrestrial SoilMNFRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMESCCTGDSCDMKKEGEANSEAKHDCCGESCNMKKHDEKMKHDKDGKHECCNV
Ga0134127_1013629743300010399Terrestrial SoilMNFRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMESCCTGDSCDMKKEGEANSEAKHDCCGESCDMKKHDEKMKHDKDGKHECCNVKNKDKNKKNT*
Ga0105246_1103195213300011119Miscanthus RhizosphereMNPRKYTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCSEDACDMKKEGEANSQGSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNSMKNKKNKKVT*
Ga0105246_1125658323300011119Miscanthus RhizosphereMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTDSCCQMESCCTDDSCDMKKEGEANSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCN
Ga0105246_1230630623300011119Miscanthus RhizosphereLVAFAAVSAQTPSQGEQKKKTESCCAMESCCTDDSCEMKKEGEANAEGKHDCCGESCDMKKHDEKMKHDKDAKHECCNIKDKNKKKNT*
Ga0126317_1087242323300011332SoilMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTESCCQMESCCADDSCDMKKEGEANSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNMK
Ga0127502_1084515513300011333SoilMKSLKNLIPVILLGLLLGVFAAVAAQTPSQGEQKTKSESCCAMESCCTEGSCEMKKDGETNAEGKHSCCNGESCDMKMKHDEKMKHDKNGKADCCNVKNKNKTKKAA*
Ga0150985_12184520523300012212Avena Fatua RhizosphereMNPRKNTFFILLLGLLLVAFATVSAQTPSQGEQKKKTESCCAMDSCCKDDSCDMKKEGEANSEGSAGKHDCCGDSCDMMKKHDAKMKHDKDAKSDCCNAKNKDKNK
Ga0157378_1226399423300013297Miscanthus RhizosphereGAQFGRNIKYLENRRTTMNPRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMESCCTDDSCEMKKEGEANAEGKHDCCGDSCDMKKHDAKMKHDKDAKHDCCNMKSKNKKKVA*
Ga0163162_1017518553300013306Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTESCCAMESCCTDDSCDMKKEGEANSEGKHDCCGESCDMKKHDAKM
Ga0157377_1085570623300014745Miscanthus RhizosphereLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDAKMKHDKDAKGECCNMKNKDKSKKKNT*
Ga0190274_1018628523300018476SoilMKPRKYTILILLLGLLLFAFAAVTAQTPAQGDQKKKAEACCSMESCCNDESCEMKKDGTAETEGKDSCCGDSCDMKKHDSKMKHDKDGKHECCNIKDKKKKVA
Ga0190274_1370344613300018476SoilMKLRKNTFLILLLGLLLVAFAVATAQTPSQSEQKKKAEACCSMESCCDDDSCEMKKEGTAKAEGKDSCCSDSCDMKKHDSKMKHDKDAKHDCCNMKSK
Ga0207710_10000436273300025900Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCKDGSCDMKKEGEANAEGKHDCCSGDSCDMMKNHDAKMKHDKDAKGECCNMKNKDKNKKKDT
Ga0207688_1047661813300025901Corn, Switchgrass And Miscanthus RhizosphereMNFRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMESCCTGDSCDMKKEGEANSEAKHDCCGESCDMKKHDEKMKHDKDGKHECCNVKNKDKNKKNT
Ga0207645_1063184513300025907Miscanthus RhizosphereMNPRKNTFLIFLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMKKHDAKMKHDKDHKGDCCNMKNKKTKKTA
Ga0207654_1015410913300025911Corn RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDAKGECCNMKNKDKSKKKNT
Ga0207654_1043318423300025911Corn RhizosphereMKPRKNTILILLLGLLLVAFAAVTAQTPAQGEQKKKAEACCSMESCCSDSSCEMKKEGEANAEGKHDCCGDSCDMKKHDAKMKHDKDAKHDCCNMKSKNKKKVA
Ga0207654_1066908613300025911Corn RhizosphereMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTESCCQMESCCTDDSCDMKKEGEANSGGKHDCCGESCDMKKHDAKMKHDKDAKGECCNMKN
Ga0207671_1045369723300025914Corn RhizosphereRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCKDGSCDMKKEGEANAEGKHDCCSGDSCDMMKNHDAKMKHDKDAKGECCNMKNKDKNKKKDT
Ga0207662_1003822253300025918Switchgrass RhizosphereMKPRKNTILILLLGLLLVAFSVVSAQTPAQGDQKKNAEACCSMESCCKGDSCEMKKDGGANSEAKHDCCGDSCDMKKHDENMKHDKDAKHECCNIKNKDKKKVA
Ga0207662_1019829333300025918Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTDSCCQMESCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDAKMKHDKDAKGECCNMKNKDKNKKKDT
Ga0207694_1000192963300025924Corn RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCQMDSCCTGDSCDMKKEGEANSQGSEAKHDCCGDSCDMMKHDAKMKHDKDAKGECCNMKNKDKNKKKNT
Ga0207650_100000113253300025925Switchgrass RhizosphereMNPRKHTFLILLLGLLLVAFAAVSAQTPSQGDQKKKTESCCAMKSCCNDDSCDMKKEGEANAEGKHDCCGESCDMKKHDEKMKHDKDAKHECCNIKDKNKKKNT
Ga0207650_1018139943300025925Switchgrass RhizosphereMKPLKNTIPAILLGLILAVFAAVPAQTTSQGDQKKKTESCCAMESCCNGESCEMKKDGTANSEGKESCCDGESCNMKMKHDAKKHDKDAKADCCNIKNKKGKKAA
Ga0207650_1041416013300025925Switchgrass RhizosphereMKPRKNTILILLLGLLLVAFAAVAAQTPSQGEQKKNAEACCSMESCCHDGSCEMKKDGTAKTEGKGSCCGDSCDMEKHDAKMKHDKDGKHE
Ga0207650_1094935913300025925Switchgrass RhizosphereMNPRKNTILILLLGLLLVAFSAASAQTPAQGDQKKDAEACCAKDSCCKDDSCEMKKEGEANSEAKHDCCGDSCDMKKHDENMKHDKDAKHECCNMKNKDKK
Ga0207650_1102227013300025925Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTESCCAMDSCCKDDSCDMKKEGEANSEGAAGKHDCCGDSCDMMKKHDAKMKHDKDAKGECCNSMKNKKNKKVT
Ga0207706_1050108323300025933Corn RhizosphereIFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDAKGECCNMKNKDKNKKKDT
Ga0207709_1011045813300025935Miscanthus RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDAKMKHDKDAKGECCNMKNKDKNKKKNT
Ga0207711_1180501023300025941Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCKDGSCDMKKEGEANAEGKHDCCSGDSCDMMKNHDAKMKH
Ga0207689_1054170113300025942Miscanthus RhizosphereMNPRKNTFLIFLLGLLLVAFSAVAAQTPSQGEQKKKTESCCAMDSCCSEDSCDMKKEGDANSQGSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNSMKNKKNKKVT
Ga0207640_1031230613300025981Corn RhizosphereMNFRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMESCCTGDSCDMKKEGEANSEAKHDCCGESCDMKKHDEKMKH
Ga0207658_1125791013300025986Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCKDGSCDMKKEGEANAEGKHDCCSGDSCDMMKNHDAKMKHDKDAKGECCNSMKNKKNKKVT
Ga0207703_1014346313300026035Switchgrass RhizosphereMNPRKNTILILLLGLLLVAFSAASAQTPAQGDQKKDAEACCAKDSCCKDDSCEMKKEGEANSEAKHDCCGDSCDMKKHDENMKHDKDTKHEC
Ga0207678_1193920613300026067Corn RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDARGECCNMKNK
Ga0207676_1040951213300026095Switchgrass RhizosphereFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDAKGECCNMKNKDKSKKKNT
Ga0207674_1039548243300026116Corn RhizosphereMKPRKNIILILLLGLLLAAFAAVTAQTPAQGEQKKKAEACCSMESCCSDNSCEMKKEGEANAEGKHDCCGDSCDMKKHDAKMKHDKDAGHDCCNMKNKDKSKKKVA
Ga0207698_1174754713300026142Corn RhizosphereMNPRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCKDGSCDMKKEGEANAEGKHDCCSGDSCDMMKNHDAKMKHDKD
Ga0208338_1000044303300027514SoilMNPRKNTFLILLLGLLLVAFSAVTAQTPSQGEQKNKTESCCQTDSCCTDDSCDMKKEGEANSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNSMKSKKNKKVT
Ga0209795_1011103213300027718AgaveMKPLKNLIPVILLGLLLVAFAAVSAQTPSQGDQKKKSESCCAMESCCTGDSCEMKKDGETNAEGKHSCCNGESCDMKNHGEKMKHEKHGKGDCCNAKNKKNKKVA
Ga0268264_1042988413300028381Switchgrass RhizosphereMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDAKGECCNMK
Ga0307408_10024744023300031548RhizosphereMKPRKNTILILLLGLLLFAFAAVTAQTPSQGEQKKNTEACCSMESCCSDTSCEMKKDGEANTEAKHSCCGDSCDMKTKHDAKMKHNKDGKADCCNIKNKKNKKVA
Ga0310813_1100505423300031716SoilRKNTFLILLLGLLLVAFAAVSAQTPSQGEQKKKTESCCAMDSCCKDGSCDMKKEGEANAEGKHDCCSGDSCDMMKNHDAKMKHDKDAKGECCNMKNKDKNKKKNT
Ga0310900_1041891723300031908SoilMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMSKHDDAKMKHDKDAKGECCNMKNKDKNKKKDT
Ga0314780_073500_449_7333300034659SoilMNPRKNTFLILLLGLLLVAFSAAAAQTPSQGEQKKKTESCCKMDSCCTDDSCDMKKEGEANSQGSEAKHDCCGESCDMKKHDAKMKHDKDAKGEC
Ga0314784_090310_2_3283300034663SoilMNPRKNTFLILLLGLLLVAFSAVAAQTPSQGEQKKKTESCCQMESCCTDDSCDMKKEGEANSQGSEGKHDCCGESCDMKKHDAKMKHDKDAKGECCNSMKNKKNKKVT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.