NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F081469

Metagenome / Metatranscriptome Family F081469

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F081469
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 38 residues
Representative Sequence MGLKGDKSGEMSVSNALTALTKSNQVRREGGKYRAAA
Number of Associated Samples 90
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 19.30 %
% of genes near scaffold ends (potentially truncated) 67.54 %
% of genes from short scaffolds (< 2000 bps) 93.86 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (63.158 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(14.912 % of family members)
Environment Ontology (ENVO) Unclassified
(36.842 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.895 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.38%    β-sheet: 12.31%    Coil/Unstructured: 72.31%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF08447PAS_3 4.39
PF12728HTH_17 3.51
PF13975gag-asp_proteas 3.51
PF01695IstB_IS21 2.63
PF13650Asp_protease_2 2.63
PF02805Ada_Zn_binding 0.88
PF00501AMP-binding 0.88
PF04536TPM_phosphatase 0.88
PF13410GST_C_2 0.88
PF02775TPP_enzyme_C 0.88
PF10609ParA 0.88
PF05598DUF772 0.88
PF13545HTH_Crp_2 0.88
PF05406WGR 0.88
PF00211Guanylate_cyc 0.88
PF00378ECH_1 0.88
PF02668TauD 0.88
PF03328HpcH_HpaI 0.88
PF00313CSD 0.88
PF00239Resolvase 0.88
PF08448PAS_4 0.88
PF05930Phage_AlpA 0.88
PF04909Amidohydro_2 0.88
PF01255Prenyltransf 0.88
PF13417GST_N_3 0.88
PF07883Cupin_2 0.88
PF13827DUF4189 0.88
PF01527HTH_Tnp_1 0.88
PF00950ABC-3 0.88
PF12833HTH_18 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 2.63
COG0020Undecaprenyl pyrophosphate synthaseLipid transport and metabolism [I] 0.88
COG0469Pyruvate kinaseCarbohydrate transport and metabolism [G] 0.88
COG0609ABC-type Fe3+-siderophore transport system, permease componentInorganic ion transport and metabolism [P] 0.88
COG1108ABC-type Mn2+/Zn2+ transport system, permease componentInorganic ion transport and metabolism [P] 0.88
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.88
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.88
COG2169Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domainsReplication, recombination and repair [L] 0.88
COG2175Taurine dioxygenase, alpha-ketoglutarate-dependentSecondary metabolites biosynthesis, transport and catabolism [Q] 0.88
COG2301Citrate lyase beta subunitCarbohydrate transport and metabolism [G] 0.88
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.88
COG3311DNA-binding transcriptional regulator AlpATranscription [K] 0.88
COG3831WGR domain, predicted DNA-binding domain in MolRTranscription [K] 0.88
COG38362-keto-3-deoxy-L-rhamnonate aldolase RhmACarbohydrate transport and metabolism [G] 0.88
COG4606ABC-type enterochelin transport system, permease componentInorganic ion transport and metabolism [P] 0.88


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms63.16 %
UnclassifiedrootN/A36.84 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004081|Ga0063454_101007372Not Available671Open in IMG/M
3300004153|Ga0063455_100848783All Organisms → cellular organisms → Bacteria → Proteobacteria640Open in IMG/M
3300004153|Ga0063455_101708487All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300004643|Ga0062591_102688492Not Available526Open in IMG/M
3300004803|Ga0058862_10642029Not Available529Open in IMG/M
3300005175|Ga0066673_10315262All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium912Open in IMG/M
3300005179|Ga0066684_10392386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium931Open in IMG/M
3300005329|Ga0070683_101110756All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga759Open in IMG/M
3300005335|Ga0070666_10218966Not Available1342Open in IMG/M
3300005353|Ga0070669_101378864Not Available611Open in IMG/M
3300005458|Ga0070681_10852823All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium829Open in IMG/M
3300005471|Ga0070698_101065669All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium756Open in IMG/M
3300005541|Ga0070733_10331416All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1008Open in IMG/M
3300005569|Ga0066705_10465602All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium792Open in IMG/M
3300005617|Ga0068859_101728116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium691Open in IMG/M
3300005618|Ga0068864_100810395All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300005618|Ga0068864_101609932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium653Open in IMG/M
3300005841|Ga0068863_101683500All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium644Open in IMG/M
3300006031|Ga0066651_10347813All Organisms → cellular organisms → Bacteria → Proteobacteria795Open in IMG/M
3300006237|Ga0097621_101640183All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300006804|Ga0079221_11709662Not Available513Open in IMG/M
3300006893|Ga0073928_10048608All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium3848Open in IMG/M
3300006914|Ga0075436_100568194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria834Open in IMG/M
3300009090|Ga0099827_10348759All Organisms → cellular organisms → Bacteria1259Open in IMG/M
3300009090|Ga0099827_10689874All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium882Open in IMG/M
3300009090|Ga0099827_11391415Not Available611Open in IMG/M
3300009100|Ga0075418_10294012All Organisms → cellular organisms → Bacteria1731Open in IMG/M
3300009143|Ga0099792_10397985All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium842Open in IMG/M
3300009143|Ga0099792_11187156All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium517Open in IMG/M
3300009148|Ga0105243_11062340Not Available816Open in IMG/M
3300009551|Ga0105238_12906553All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium515Open in IMG/M
3300009553|Ga0105249_12251056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium618Open in IMG/M
3300009789|Ga0126307_11183697All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium619Open in IMG/M
3300009789|Ga0126307_11410333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium564Open in IMG/M
3300010037|Ga0126304_11167711Not Available527Open in IMG/M
3300010040|Ga0126308_11103225Not Available559Open in IMG/M
3300010166|Ga0126306_10212012Not Available1466Open in IMG/M
3300010371|Ga0134125_11832666Not Available660Open in IMG/M
3300010379|Ga0136449_103779825Not Available570Open in IMG/M
3300012199|Ga0137383_10291189All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1196Open in IMG/M
3300012200|Ga0137382_11106612Not Available566Open in IMG/M
3300012206|Ga0137380_10504215All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1066Open in IMG/M
3300012212|Ga0150985_100511335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium694Open in IMG/M
3300012212|Ga0150985_101810399All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium919Open in IMG/M
3300012212|Ga0150985_103957336All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium502Open in IMG/M
3300012212|Ga0150985_111124678Not Available526Open in IMG/M
3300012212|Ga0150985_116650232Not Available500Open in IMG/M
3300012212|Ga0150985_117654261All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300012212|Ga0150985_120895695Not Available500Open in IMG/M
3300012212|Ga0150985_122560003Not Available689Open in IMG/M
3300012350|Ga0137372_10582073Not Available823Open in IMG/M
3300012350|Ga0137372_11189706All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales516Open in IMG/M
3300012362|Ga0137361_11397372All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium623Open in IMG/M
3300012363|Ga0137390_10010983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales8031Open in IMG/M
3300012469|Ga0150984_105130171All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales661Open in IMG/M
3300012469|Ga0150984_108900209All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium761Open in IMG/M
3300012469|Ga0150984_117138394Not Available614Open in IMG/M
3300012469|Ga0150984_122849791Not Available528Open in IMG/M
3300012915|Ga0157302_10004597All Organisms → cellular organisms → Bacteria → Proteobacteria3123Open in IMG/M
3300012917|Ga0137395_10905325Not Available637Open in IMG/M
3300012917|Ga0137395_11223896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium524Open in IMG/M
3300012937|Ga0162653_100023481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales848Open in IMG/M
3300012957|Ga0164303_10722622Not Available674Open in IMG/M
3300012957|Ga0164303_11424122All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria519Open in IMG/M
3300012984|Ga0164309_11311801All Organisms → cellular organisms → Bacteria → Proteobacteria613Open in IMG/M
3300012986|Ga0164304_10768301Not Available740Open in IMG/M
3300013306|Ga0163162_12577242Not Available585Open in IMG/M
3300013503|Ga0120127_10188130All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium508Open in IMG/M
3300013764|Ga0120111_1060575All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium931Open in IMG/M
3300014150|Ga0134081_10052486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1220Open in IMG/M
3300014497|Ga0182008_10546700Not Available643Open in IMG/M
3300014968|Ga0157379_10258508Not Available1582Open in IMG/M
3300014969|Ga0157376_12082566Not Available606Open in IMG/M
3300015374|Ga0132255_105086333Not Available557Open in IMG/M
3300017792|Ga0163161_10643062All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium878Open in IMG/M
3300018468|Ga0066662_10795434All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium917Open in IMG/M
3300019356|Ga0173481_10477214Not Available630Open in IMG/M
3300019361|Ga0173482_10627624Not Available544Open in IMG/M
3300019888|Ga0193751_1056311Not Available1667Open in IMG/M
3300019888|Ga0193751_1175616Not Available743Open in IMG/M
3300022557|Ga0212123_10096162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2435Open in IMG/M
3300022557|Ga0212123_10496661All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium793Open in IMG/M
3300022557|Ga0212123_10726683Not Available607Open in IMG/M
3300024310|Ga0247681_1025131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium869Open in IMG/M
3300025903|Ga0207680_10840406All Organisms → cellular organisms → Bacteria → Proteobacteria658Open in IMG/M
3300025903|Ga0207680_11165514All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium550Open in IMG/M
3300025917|Ga0207660_10280844All Organisms → cellular organisms → Bacteria1321Open in IMG/M
3300025918|Ga0207662_11029768All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium585Open in IMG/M
3300025925|Ga0207650_10330042All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga1251Open in IMG/M
3300025930|Ga0207701_10157403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S1032011Open in IMG/M
3300025930|Ga0207701_10935627Not Available724Open in IMG/M
3300025936|Ga0207670_11166729All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium651Open in IMG/M
3300025972|Ga0207668_10944748All Organisms → cellular organisms → Bacteria → Proteobacteria769Open in IMG/M
3300026023|Ga0207677_12256214Not Available507Open in IMG/M
3300026075|Ga0207708_11735556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium548Open in IMG/M
3300026078|Ga0207702_10281251All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → unclassified Haliangium → Haliangium sp. UPWRP_21573Open in IMG/M
3300026095|Ga0207676_10057379All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3065Open in IMG/M
3300026118|Ga0207675_102535809All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium523Open in IMG/M
3300026316|Ga0209155_1284374All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium513Open in IMG/M
3300026527|Ga0209059_1012900All Organisms → cellular organisms → Bacteria3781Open in IMG/M
3300026557|Ga0179587_11193647All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium501Open in IMG/M
3300027787|Ga0209074_10468908All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium541Open in IMG/M
3300027867|Ga0209167_10239973All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium971Open in IMG/M
3300027875|Ga0209283_10734879All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium613Open in IMG/M
3300027882|Ga0209590_10565169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium733Open in IMG/M
3300028379|Ga0268266_11170606Not Available744Open in IMG/M
3300028592|Ga0247822_11930534Not Available506Open in IMG/M
3300030986|Ga0308154_109816All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium618Open in IMG/M
3300031122|Ga0170822_17048829All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium666Open in IMG/M
3300031671|Ga0307372_10166209Not Available1511Open in IMG/M
3300031672|Ga0307373_10181303All Organisms → cellular organisms → Bacteria → Proteobacteria1555Open in IMG/M
3300031708|Ga0310686_109937961Not Available565Open in IMG/M
3300032515|Ga0348332_14462296Not Available876Open in IMG/M
3300034678|Ga0314803_136157Not Available511Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.65%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere7.02%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.14%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.26%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.39%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.39%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring3.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.51%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.51%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.63%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.75%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.75%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.75%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.75%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.75%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.75%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.75%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.75%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.75%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.88%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.88%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.88%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.88%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.88%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.88%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.88%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.88%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012937Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300013764Permafrost microbial communities from Nunavut, Canada - A28_35cm_6MEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300024310Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300030986Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031671Soil microbial communities from Risofladan, Vaasa, Finland - OX-1EnvironmentalOpen in IMG/M
3300031672Soil microbial communities from Risofladan, Vaasa, Finland - OX-2EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300034678Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0063454_10100737223300004081SoilLERMGLKGDKQGEMSVSNALTALAKRNQIRREGGKYYPGSQG*
Ga0063455_10084878313300004153SoilEILERMGLKGDKSGEMSVSNALTTLTKSNQVHREGGKYRATK*
Ga0063455_10170848713300004153SoilMGLKGDKAGEMSVSNALTALTKRNQVRREGGQILSGLPRCW*
Ga0062591_10268849213300004643SoilGEILERMGLKGDKSGEMSVSNALTALTKRNEVRRDGGKYHSA*
Ga0058862_1064202923300004803Host-AssociatedAKMDLKGNKAGEMSVSNALTALTKAGVVVRRDGKYIGGVG*
Ga0066673_1031526223300005175SoilILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0066684_1039238623300005179SoilRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0070683_10111075613300005329Corn RhizosphereGEILERMGLKGDKSGEMSVSNALSALTKRNQLSRTGGKYRAA*
Ga0070666_1021896633300005335Switchgrass RhizosphereLAKMGLKGDKAGEMSVSNALTALSKSNQVRREGGKYHVAA*
Ga0070669_10137886413300005353Switchgrass RhizosphereGELLQSLGLKGDKSGEMSVSNALSALTKSNQVRRGGGKYHAV*
Ga0070681_1085282323300005458Corn RhizosphereLEKMGLKGDKAGEMSVSNALTALGKSNQVRREGGKYHIAA*
Ga0070698_10106566933300005471Corn, Switchgrass And Miscanthus RhizosphereTRGEILDKMGLKGNKAGEMSVSNALTALTKSKQVARKDRKYVAA*
Ga0070733_1033141623300005541Surface SoilMGLKGNKTGEMSVSNALTALTKGNQISRRDGKYHAS*
Ga0066705_1046560213300005569SoilEILEKMGLKGNKAGEMSVSNALTALTKSKQVARRDRKYVAG*
Ga0068859_10172811623300005617Switchgrass RhizosphereKMGLKGNKSGEMSVSNALTALTKAMHVRREGGKYHSA*
Ga0068864_10081039533300005618Switchgrass RhizosphereMGLKGDKSGEMSVSNALTALTKSNQVRREDGKYRAAM*
Ga0068864_10160993223300005618Switchgrass RhizosphereMGLKGDKSGEMSVSNALTALTKNNQVQRDGGKYRATT*
Ga0068863_10168350023300005841Switchgrass RhizosphereMGLKGDKSGEMSVSNALTALTKSNQVRREDGKYRAAT*
Ga0066651_1034781313300006031SoilLKGNKSGEMSVSNALTALTKNNQVRRDGRKYLAA*
Ga0097621_10164018313300006237Miscanthus RhizosphereEILERMGLKGDKSSEMSVSNALTALTKRNQVSRIGGKYRAA*
Ga0079221_1170966223300006804Agricultural SoilGEILERMGLKGDKSGEMSVSNALTALTKSNQVHREGGKYRAAM*
Ga0073928_1004860833300006893Iron-Sulfur Acid SpringMRLKGNKAGEMSVSNALTALTKGNQVVRADGRYRVA*
Ga0075436_10056819433300006914Populus RhizosphereGLKGNKAGEMSVSNALTALTKTNQVTRKDGKYAAA*
Ga0099827_1034875913300009090Vadose Zone SoilRGEIFQRMGLKGDKSGEMSVSNALTALTKANQVIRRDGPYSAA*
Ga0099827_1068987423300009090Vadose Zone SoilMGLKGDKSGEMSVSNALTALTKANQVIRRDGRYSAA*
Ga0099827_1139141513300009090Vadose Zone SoilLKGNKTGEMSVSNALTALTKGNQVARRDGKYVTA*
Ga0075418_1029401233300009100Populus RhizosphereMGLKGDKSGEMAVSNALTALFKGGQVRREGGKYHAA*
Ga0099792_1039798523300009143Vadose Zone SoilLKGDKSGEMSVSNALTALTKANEVTRRDGRYITA*
Ga0099792_1118715613300009143Vadose Zone SoilRGQILEKMGLKGNKAGEMSVSNALTALTKGNQVRREGRSYHSA*
Ga0105243_1106234023300009148Miscanthus RhizosphereMGLKGDKSREMSVSNALTALTKRNQVSRIGGKYRAA*
Ga0105238_1290655313300009551Corn RhizosphereSRREILDKMRLKGNKSGEMSVSNALTALTKAMHVRREGGKYHSA*
Ga0105249_1225105613300009553Switchgrass RhizosphereMGLKGDKSSEMSVSNALTALTKRNQVSRIGGKYRAA*
Ga0126307_1118369723300009789Serpentine SoilMGLKGNKSGEMSVSNALTALTKSNQVRRNEERKYVAA*
Ga0126307_1141033313300009789Serpentine SoilMGLKGNKSGEMSVSNALTALTKSNQLRRNEERKYVAA*
Ga0126304_1116771123300010037Serpentine SoilILERMGLKGDKSGEMSVSNALTALTKSNQVSRSGGKYRGA*
Ga0126308_1110322523300010040Serpentine SoilKGDKSGEMSVSNALTALTKRNEVRREGGRYLPAS*
Ga0126306_1021201213300010166Serpentine SoilLKGDKSGEMSVSNALTALTKSNQVSRSGGKYRGA*
Ga0134125_1183266633300010371Terrestrial SoilERMGLKGDKSGEMSVSNALTALTKRNQVRREGGKYHPAS*
Ga0136449_10377982513300010379Peatlands SoilMGLKGDRLAEKSVSNALTALTKSNQVSRREGKYVIDG*
Ga0137383_1029118913300012199Vadose Zone SoilMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0137382_1110661233300012200Vadose Zone SoilLKGNKSGEMSVSNALTALTKGKQVARKDRKYVAA*
Ga0137380_1050421513300012206Vadose Zone SoilILEKMGLKGNKLGEMSVSNALTALTKGNQVRREGGKYLSS*
Ga0150985_10051133523300012212Avena Fatua RhizosphereMGLKGDKSSEMSVSNALTALTKSNQVHREGGKYRAAT*
Ga0150985_10181039913300012212Avena Fatua RhizosphereRMGLKGNKSGEMSVSNALTALTKTNQVSRHEGRYIAQGG*
Ga0150985_10395733613300012212Avena Fatua RhizosphereMGLKGNKAGEMSVSNALTALTKTNQIARRDRKYVVG*
Ga0150985_11112467813300012212Avena Fatua RhizosphereGEILERMGLKGDKSGEMSVSNALTALTKRNQVRREGGKYLPAG*
Ga0150985_11665023213300012212Avena Fatua RhizosphereLERMGLKGDKSGEMSVSNALTALTKRNQVRRDGGKYHPAS*
Ga0150985_11765426123300012212Avena Fatua RhizosphereMGLKGDKSGEMSVSNALTALTKRNQVRRDGGRYHPAS*
Ga0150985_12089569523300012212Avena Fatua RhizosphereEILTKMGLKGDKAGEMAISNALTALTKNNQIRRDGGKYHAG*
Ga0150985_12256000333300012212Avena Fatua RhizosphereLKGDKSGEMSVSNALTALTKSNQVFRDGGKYRAAM*
Ga0137372_1058207333300012350Vadose Zone SoilGLKGNKTGEMSVSNALTALTKGNQVARRDGKYVAA*
Ga0137372_1118970623300012350Vadose Zone SoilGLKGNKSDEMSVSNALTALTKANHVQRNSDRKYVVA*
Ga0137361_1139737223300012362Vadose Zone SoilMGLKGNKAGEMSVSNALTALTKSNQVSRHEGKYRASA*
Ga0137390_1001098383300012363Vadose Zone SoilGLKGNKTGEMSVSNALTALTKAGQVHRQDGKYRSA*
Ga0150984_10513017113300012469Avena Fatua RhizosphereMGLKGDKSGEMSVSNALTALTKSNQVRREDGKYRAAA*
Ga0150984_10890020913300012469Avena Fatua RhizosphereMGLKGDKSGEMSVSNALTALTKSNQVHRDGGKYRIADGDG
Ga0150984_11713839413300012469Avena Fatua RhizosphereLSRGEILERMGLKGDKSGEMSVSNALTALTKRNEVRREGGKYLPA*
Ga0150984_12284979113300012469Avena Fatua RhizosphereRGEILERMGLKGDKSGEMSVSNALTALTKANQVNRRDGKYIAA*
Ga0157302_1000459713300012915SoilMGLKGDKAGEMSVSNALTALTKSNQVQREGGKYRAAT*
Ga0137395_1090532513300012917Vadose Zone SoilEILDNMGLEGNKAGEMSVSNALTALTKSKQVALNDRKYMAA*
Ga0137395_1122389613300012917Vadose Zone SoilILEEMGLKGNKSGEMSVSNALTALTKSQQVTRREGKYVIA*
Ga0162653_10002348133300012937SoilQKMGLKGDKAGEMSVSNALTALSKSNQVRREGGKYHLAP*
Ga0164303_1072262223300012957SoilLERMGLKGDKSGETSVSNALTALTKSNQLRREGGKYRTAA*
Ga0164303_1142412223300012957SoilMGLKGDKSGEMSVSNALTALTKSNQVHREGGKYRAM*
Ga0164309_1131180123300012984SoilGLKGDKSGEMSVSNALTALTKSNQVHREGGKYRAM*
Ga0164304_1076830123300012986SoilMGLKGDKSGEMSVSNALTALTKSNQVRREGGKYRAAA*
Ga0163162_1257724223300013306Switchgrass RhizosphereMGLKGDKAGEMSVSNALTALSKSNQVRREGGKYHVAA*
Ga0120127_1018813023300013503PermafrostLLDKMGLKGNKSGEMSVSNALTALTKGNQVVRRDGKYVASMG*
Ga0120111_106057513300013764PermafrostMGLKGNKAGEMSVSNALTALTKGNQVRRDGGKYLAA*
Ga0134081_1005248623300014150Grasslands SoilRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0182008_1054670023300014497RhizosphereMGLKGDKSGEMSVSNALTALTKSGQVSRNEGKYTAA*
Ga0157379_1025850843300014968Switchgrass RhizosphereMGLKGDKSSEMSVSNALTALTKRNQVSRIEGKYRAA*
Ga0157376_1208256613300014969Miscanthus RhizosphereMGLKGDKAGEMSVSNALTALSKSNQVRREGGKYHLAA*
Ga0132255_10508633313300015374Arabidopsis RhizosphereMGLKGDKAGEMSISNALTALTKSNQVRREDGKYHRA*
Ga0163161_1064306223300017792Switchgrass RhizosphereMGLKGDKSSEMSVSNALTALTKRNQVSRIEGKYRAA
Ga0066662_1079543413300018468Grasslands SoilGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0173481_1047721423300019356SoilTRGEILERMELKGDKSSEMSVSNALTALTKRNQVSRIGGKYRAA
Ga0173482_1062762423300019361SoilLLQKMGLKGDKAGEMSVSNALTALSKNNQVRREGGKYHVQA
Ga0193751_105631123300019888SoilMGLKGDKSGEMSISNALTALIKANQISRRDGKYTSA
Ga0193751_117561623300019888SoilLLDKMGLKGDKTGEMSVSNALTALTKADQVARHDGKYVSA
Ga0212123_1009616223300022557Iron-Sulfur Acid SpringMGLKGNKSGEMSVSNALTALTKAKEVVRAEGRYRVA
Ga0212123_1049666133300022557Iron-Sulfur Acid SpringMRLKGNKAGEMSVSNALTALTKASQVVRADGRYRAA
Ga0212123_1072668323300022557Iron-Sulfur Acid SpringKMGLKGNKAGEMSVSNALTALTKASQVVRADGRYRAA
Ga0247681_102513113300024310SoilLEQMGLKGDKSGEMSVSNALTALAKTSQVTRRDGRYVTG
Ga0207680_1084040623300025903Switchgrass RhizosphereLEKMGLKGDKSGEMSVSNALTALTKTSQVSRHEGRYRSG
Ga0207680_1116551423300025903Switchgrass RhizosphereMGLKGDKSGEMSVSNALTALTKRNQVRRDGGKYHSA
Ga0207660_1028084413300025917Corn RhizosphereMGLKGDKSGAMSVSNALTALTKANQVQREGGKYRIAA
Ga0207662_1102976823300025918Switchgrass RhizosphereMGLKGDKSGEMSVSNALTALTKTSQVSRHEGRYRSG
Ga0207650_1033004223300025925Switchgrass RhizosphereMGLKGDKSSEMSVSNALTALTKRNQVSRIGGKYRAA
Ga0207701_1015740333300025930Corn, Switchgrass And Miscanthus RhizosphereMGLKGDKSSEMSVSNALTALTKRNQLSRTGGKYRAA
Ga0207701_1093562723300025930Corn, Switchgrass And Miscanthus RhizosphereMGLKGDKAGEMSVSNVLTALSKSNQVRRDGGKYHVAA
Ga0207670_1116672923300025936Switchgrass RhizosphereMGLKGDKSREMSVSNALTALTKRNQVSRIGGKYRAA
Ga0207668_1094474823300025972Switchgrass RhizosphereGEILDRMGLKGDKSSEMSVSNALTALTKRNQVSRIGGKYRAA
Ga0207677_1225621413300026023Miscanthus RhizosphereMGLKGDKAGEMSVSNALTALAKGNQVHRDGGKYRMTA
Ga0207708_1173555613300026075Corn, Switchgrass And Miscanthus RhizosphereMGLKGDKSGEMSVSNALSALTKRNQLSRTGGKYRAA
Ga0207702_1028125123300026078Corn RhizosphereMGLKGDKSGEMSVSNALSALTKRNQLSRTGGKYRTA
Ga0207676_1005737913300026095Switchgrass RhizosphereMGLKGDKSGEMSVSNALTALTKNNQVQRDGGKYRATT
Ga0207675_10253580913300026118Switchgrass RhizosphereILERMGLKGDKSGEMSVSNALTALTKRNQVRRDGGKYHSA
Ga0209155_128437423300026316SoilILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS
Ga0209059_101290013300026527SoilHIKGNKAGETSVSNALTALLKREQIVRRERKYRVE
Ga0179587_1119364713300026557Vadose Zone SoilEILDKMGLKGNKAGEMSVSNALTALTKSKQVSRKDRKYIAA
Ga0209074_1046890813300027787Agricultural SoilMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS
Ga0209167_1023997323300027867Surface SoilMGLKGNKTGEMSVSNALTALTKGNQISRRDGKYHAS
Ga0209283_1073487933300027875Vadose Zone SoilILEKMGLKGNKSGEMSVSNALTALTKANQVSRRDGKYHAA
Ga0209590_1056516923300027882Vadose Zone SoilMGLKGDKSGEMSVSNALTALTKANQVIRRDGRYSAA
Ga0268266_1117060623300028379Switchgrass RhizosphereILEKMGLKGDKSGEMSVSNALTALTKSNQVRRNAERKYVAA
Ga0247822_1193053413300028592SoilGLKGDKSGEMSVSNALTALTKSNQVRREGGKYRTAM
Ga0308154_10981613300030986SoilEILERMGLKGDKSGEMSVSNALTALTKSNQVRREDGKYRAAT
Ga0170822_1704882913300031122Forest SoilLEKLRLKGDKSGEMSVSNALTALIKGNQVRRDDRKYVAA
Ga0307372_1016620933300031671SoilMGLKGDKAGEMSVSNALTALTKVNQVMRREGKYVAA
Ga0307373_1018130313300031672SoilIIERMGLKGDKTGEMSVSNALTALIKANQLTRRDGRYIAA
Ga0310686_10993796113300031708SoilMGLKGDKSGAMSVSNALTALSKANQVVRRDGRYIAHEGMTA
Ga0348332_1446229613300032515Plant LitterKGDKSGAMSVSNALTALSKANQVVRRDGKYIAHEGIAA
Ga0314803_136157_2_1183300034678SoilEKLGLKGDKSGEMSVSNALTALTKGSHIRRDGGKYHAA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.