Metagenome / Metatranscriptome Family F081520

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081520
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	85 residues
Representative Sequence	MSVSSTVIREEELTERLLAQQPAAKATLERLRVRFEGRSAYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYIAAVE
Number of Associated Samples	63
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.14 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	72.81 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.018 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (32.456 % of family members)
Environment Ontology (ENVO)	Unclassified (42.105 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.86% β-sheet: 11.21% Coil/Unstructured: 62.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF12840	HTH_20	16.67
PF02591	zf-RING_7	12.28
PF00390	malic	9.65
PF03949	Malic_M	7.02
PF13291	ACT_4	4.39
PF00582	Usp	2.63
PF01022	HTH_5	2.63
PF02627	CMD	1.75
PF00361	Proton_antipo_M	1.75
PF02518	HATPase_c	1.75
PF00072	Response_reg	0.88
PF00011	HSP20	0.88
PF00561	Abhydrolase_1	0.88
PF13360	PQQ_2	0.88
PF14903	WG_beta_rep	0.88
PF00916	Sulfate_transp	0.88
PF00146	NADHdh	0.88
PF01058	Oxidored_q6	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0281	Malic enzyme	Energy production and conversion [C]	16.67
COG1579	Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain	General function prediction only [R]	12.28
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	7.02
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.75
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.75
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.88
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	0.88
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	0.88
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	0.88
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.88
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.88
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	0.88
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	0.88
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	14.91 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	14.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.75 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Candidatus Melainabacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	14.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.75 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
unclassified Candidatus Melainabacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria	14.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Candidatus Melainabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	14.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.75 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0810168	Not Available	873	Open in IMG/M
3300000559\|F14TC_100080272	All Organisms → cellular organisms → Bacteria	5318	Open in IMG/M
3300000559\|F14TC_100080273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	984	Open in IMG/M
3300000787\|JGI11643J11755_11535969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	671	Open in IMG/M
3300001431\|F14TB_105741006	Not Available	642	Open in IMG/M
3300004268\|Ga0066398_10050237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	841	Open in IMG/M
3300004281\|Ga0066397_10103772	Not Available	599	Open in IMG/M
3300004633\|Ga0066395_10062943	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300005332\|Ga0066388_100006892	All Organisms → cellular organisms → Bacteria	8239	Open in IMG/M
3300005332\|Ga0066388_100132086	All Organisms → cellular organisms → Bacteria	3043	Open in IMG/M
3300005332\|Ga0066388_100247566	All Organisms → cellular organisms → Bacteria	2420	Open in IMG/M
3300005332\|Ga0066388_100968144	Not Available	1419	Open in IMG/M
3300005332\|Ga0066388_101158571	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300005332\|Ga0066388_103276027	Not Available	827	Open in IMG/M
3300005332\|Ga0066388_107234893	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005713\|Ga0066905_100255955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	1348	Open in IMG/M
3300005713\|Ga0066905_100480305	Not Available	1028	Open in IMG/M
3300005713\|Ga0066905_101480671	Not Available	617	Open in IMG/M
3300005713\|Ga0066905_101787510	Not Available	567	Open in IMG/M
3300005764\|Ga0066903_102738302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	956	Open in IMG/M
3300005764\|Ga0066903_103380767	Not Available	861	Open in IMG/M
3300005764\|Ga0066903_103640628	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005764\|Ga0066903_105456111	Not Available	671	Open in IMG/M
3300005764\|Ga0066903_106384146	Not Available	615	Open in IMG/M
3300005937\|Ga0081455_10005880	All Organisms → cellular organisms → Bacteria	13331	Open in IMG/M
3300006049\|Ga0075417_10190128	Not Available	969	Open in IMG/M
3300006058\|Ga0075432_10438487	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300006196\|Ga0075422_10051719	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300006844\|Ga0075428_100591968	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300006844\|Ga0075428_101097413	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300006844\|Ga0075428_102041694	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300006845\|Ga0075421_100019367	All Organisms → cellular organisms → Bacteria	8539	Open in IMG/M
3300006845\|Ga0075421_100024905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7540	Open in IMG/M
3300006845\|Ga0075421_100103743	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3577	Open in IMG/M
3300006845\|Ga0075421_101253984	Not Available	823	Open in IMG/M
3300006845\|Ga0075421_101427148	Not Available	760	Open in IMG/M
3300006845\|Ga0075421_101741454	Not Available	672	Open in IMG/M
3300006846\|Ga0075430_100623419	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300006846\|Ga0075430_101251965	Not Available	610	Open in IMG/M
3300006846\|Ga0075430_101656479	Not Available	525	Open in IMG/M
3300006847\|Ga0075431_100197122	All Organisms → cellular organisms → Bacteria	2061	Open in IMG/M
3300006847\|Ga0075431_100214938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	1963	Open in IMG/M
3300006847\|Ga0075431_100349162	Not Available	1487	Open in IMG/M
3300006847\|Ga0075431_100857035	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300006854\|Ga0075425_101679915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	715	Open in IMG/M
3300006904\|Ga0075424_101729004	Not Available	662	Open in IMG/M
3300006969\|Ga0075419_10626280	Not Available	758	Open in IMG/M
3300009094\|Ga0111539_11526404	Not Available	775	Open in IMG/M
3300009100\|Ga0075418_11018295	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300009100\|Ga0075418_12907988	Not Available	523	Open in IMG/M
3300009147\|Ga0114129_10312971	All Organisms → cellular organisms → Bacteria	2089	Open in IMG/M
3300009147\|Ga0114129_13139335	Not Available	539	Open in IMG/M
3300009156\|Ga0111538_10644790	Not Available	1343	Open in IMG/M
3300009162\|Ga0075423_12850612	Not Available	530	Open in IMG/M
3300009792\|Ga0126374_10266140	Not Available	1129	Open in IMG/M
3300009792\|Ga0126374_10388084	Not Available	971	Open in IMG/M
3300010043\|Ga0126380_10763053	Not Available	786	Open in IMG/M
3300010043\|Ga0126380_10789504	Not Available	775	Open in IMG/M
3300010043\|Ga0126380_11922527	Not Available	539	Open in IMG/M
3300010043\|Ga0126380_11974254	Not Available	533	Open in IMG/M
3300010046\|Ga0126384_10054789	All Organisms → cellular organisms → Bacteria	2768	Open in IMG/M
3300010046\|Ga0126384_10627455	Not Available	944	Open in IMG/M
3300010047\|Ga0126382_10081244	All Organisms → cellular organisms → Bacteria	2028	Open in IMG/M
3300010047\|Ga0126382_10200912	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300010047\|Ga0126382_10225979	Not Available	1353	Open in IMG/M
3300010359\|Ga0126376_10492911	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300010360\|Ga0126372_10050696	All Organisms → cellular organisms → Bacteria	2807	Open in IMG/M
3300010362\|Ga0126377_10004734	All Organisms → cellular organisms → Bacteria → Acidobacteria	9964	Open in IMG/M
3300010362\|Ga0126377_10022110	All Organisms → cellular organisms → Bacteria	5254	Open in IMG/M
3300010362\|Ga0126377_10133585	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300010362\|Ga0126377_10274175	Not Available	1653	Open in IMG/M
3300010362\|Ga0126377_10304228	Not Available	1573	Open in IMG/M
3300010362\|Ga0126377_10696628	Not Available	1068	Open in IMG/M
3300010362\|Ga0126377_10751983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	1031	Open in IMG/M
3300010366\|Ga0126379_10542692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	1241	Open in IMG/M
3300010398\|Ga0126383_10140130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	2238	Open in IMG/M
3300010403\|Ga0134123_11714564	Not Available	679	Open in IMG/M
3300010868\|Ga0124844_1156824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	857	Open in IMG/M
3300010868\|Ga0124844_1192301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	750	Open in IMG/M
3300012021\|Ga0120192_10014702	Not Available	1181	Open in IMG/M
3300012081\|Ga0154003_1000391	All Organisms → cellular organisms → Bacteria	13667	Open in IMG/M
3300012081\|Ga0154003_1005214	All Organisms → cellular organisms → Bacteria → Acidobacteria	3471	Open in IMG/M
3300012081\|Ga0154003_1012915	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300012204\|Ga0137374_10003553	All Organisms → cellular organisms → Bacteria	18438	Open in IMG/M
3300012204\|Ga0137374_11074251	Not Available	575	Open in IMG/M
3300012355\|Ga0137369_10034050	All Organisms → cellular organisms → Bacteria	4634	Open in IMG/M
3300012360\|Ga0137375_10005016	All Organisms → cellular organisms → Bacteria	15758	Open in IMG/M
3300012944\|Ga0137410_10012229	All Organisms → cellular organisms → Bacteria	5830	Open in IMG/M
3300012948\|Ga0126375_10464959	Not Available	933	Open in IMG/M
3300012971\|Ga0126369_10016178	All Organisms → cellular organisms → Bacteria	5888	Open in IMG/M
3300012971\|Ga0126369_10118430	All Organisms → cellular organisms → Bacteria	2434	Open in IMG/M
3300016371\|Ga0182034_11875445	Not Available	529	Open in IMG/M
3300019487\|Ga0187893_10075434	All Organisms → cellular organisms → Bacteria	3152	Open in IMG/M
3300027654\|Ga0209799_1132935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	567	Open in IMG/M
3300027873\|Ga0209814_10042556	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300027874\|Ga0209465_10056096	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300027907\|Ga0207428_11258600	Not Available	513	Open in IMG/M
3300027909\|Ga0209382_10015479	All Organisms → cellular organisms → Bacteria	9329	Open in IMG/M
3300027909\|Ga0209382_10017968	All Organisms → cellular organisms → Bacteria	8606	Open in IMG/M
3300027909\|Ga0209382_10081019	All Organisms → cellular organisms → Bacteria	3826	Open in IMG/M
3300027909\|Ga0209382_10960163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	894	Open in IMG/M
3300027909\|Ga0209382_11832664	Not Available	589	Open in IMG/M
3300027909\|Ga0209382_12184057	Not Available	524	Open in IMG/M
3300031573\|Ga0310915_10967702	Not Available	595	Open in IMG/M
3300031901\|Ga0307406_11729822	Not Available	555	Open in IMG/M
3300031908\|Ga0310900_10629966	Not Available	851	Open in IMG/M
3300032013\|Ga0310906_10450321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	861	Open in IMG/M
3300032075\|Ga0310890_10202598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1362	Open in IMG/M
3300032261\|Ga0306920_102005971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	810	Open in IMG/M
3300034664\|Ga0314786_061427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	734	Open in IMG/M
3300034668\|Ga0314793_002353	All Organisms → cellular organisms → Bacteria	2104	Open in IMG/M
3300034672\|Ga0314797_041141	Not Available	811	Open in IMG/M
3300034677\|Ga0314802_022532	Not Available	644	Open in IMG/M
3300034678\|Ga0314803_001134	All Organisms → cellular organisms → Bacteria	2582	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.16%
Host-Associated	Host-Associated	36.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.16%
Plants	Host-Associated → Plants	34.21%
Fungi	Host-Associated → Fungi	2.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.33%
Mycelium	Host-Associated → Fungi → Mycelium	2.63%
Cave	Environmental → Terrestrial → Cave	0.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	33.33%
Loam	Environmental → Terrestrial → Soil → Loam	22.81%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	2.63%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	33.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.18%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.63%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	2.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	32.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	20.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.02%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.63%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.88%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.88%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012081	Attine ant fungus gardens microbial communities from Florida, USA - TSFL087 MetaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034672	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034677	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_08101681	2228664021	Soil	MSVVSTVIREEELIERLLAQQPSAKTTLERLRMRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCARFLYIAAVE
F14TC_1000802726	3300000559	Soil	MSVSSTVIREEELTERLLAQLPAAKATLERLRVRFEGGSDYGAFAPIRNGGCGACKVTIASQQFQRAQRGVFITCANCARFLYIVAVE*
F14TC_1000802733	3300000559	Soil	MDVGSIVVQEKELIERLLDQQPSAQATLERLRMRFEGRSAYGAFAPIRNRSCGACKVTVAWERLQRARMGAFITCANCARFLYIAD*
JGI11643J11755_115359691	3300000787	Soil	LIERLLAQQPSAKTTLERLRMRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCXRFLYIAXVE*
F14TB_1057410062	3300001431	Soil	LVEGLLAQQPAAKATLERLRVRFEGRSDYGAFAPIXXXXXGACKVTIASQQFQRAQRGVFITCANCARFLYIVAVE*
Ga0066398_100502371	3300004268	Tropical Forest Soil	VIVGLTVIREEELVERLLAQQPAAKATLERLRVRFEGKSAYGAFAPIRNGGCGACRVTIASGRLQRARTGVFITCANCARFLYIAAE*
Ga0066397_101037721	3300004281	Tropical Forest Soil	VIVDLTVIREEELVERLLAQQPAAKAMLERLRVRFEGKSAYGAFAPIRNSGCGACKVTIASGRLQRARTGVFITCANCGRFLYIAAE*
Ga0066395_100629432	3300004633	Tropical Forest Soil	LIERLLAQQPSAKAMLERLRVRFEGKSAYGAFAPIRNSGCGACKVTIASGRLQCARTGVFITCANCARFLYIAGE*
Ga0066388_1000068924	3300005332	Tropical Forest Soil	MSVSSTVIREEGLTERLLAQQPAAKATLERLRVRFEGGSGYGAFAPIRNRGCGACKVAIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0066388_1001320862	3300005332	Tropical Forest Soil	LVERLLAQQPAAKATLERLRVRFEGKSAYGAFAPIRNSGCGACRVTIASEWLQRARTGVFITCANCARFLYIAAE*
Ga0066388_1002475663	3300005332	Tropical Forest Soil	MIVGSIVIREEELIKRLLAQQPSAEATLERLRMRFEGKSAFGAFAPIKNRSCGACKVTVAWARLQRAQMGTFITCANCARFLYIVAAE*
Ga0066388_1009681441	3300005332	Tropical Forest Soil	MSKSKEICEMSVSSTVIREEELTERLLAQQPAAKATLERLLARFEGGSGYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0066388_1011585712	3300005332	Tropical Forest Soil	MGDGSRVIQEKELIERLLEQQPSAKATLERLRVRFESKGVYGAFAPIRSRGCGACNVAIATSRLQRAQKGVFITCANCARYLYIAAE*
Ga0066388_1032760272	3300005332	Tropical Forest Soil	ELIERLLEQQPSAKSTLDRLRARFQAKSAYGVFAPIRNGGCGACKVAIASAKLQRAQKGVFITCASCARFLYIADSD*
Ga0066388_1072348931	3300005332	Tropical Forest Soil	MNVGSIVIREDELIKRLLAQQPSAEATLERLRMRFEGRSAYGAFAPIRNRSCGACKMTVAWERLQRAQNGAFITCANCARFLYIAVED*
Ga0066905_1002559552	3300005713	Tropical Forest Soil	VIVALTVIREEELVERLLAQQPAAKATLERLRVRFEGNSAYGAFAPIRNSGCGACRVTIASGRLQRARTGVFITCANCARFLYIAAE*
Ga0066905_1004803051	3300005713	Tropical Forest Soil	MSVSSAVIREEELTERLLAQQPAAKATLERLRVRFEGRSDYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0066905_1014806711	3300005713	Tropical Forest Soil	RLLEQQPSAKSALERLRVRFGGGSVYGVFAPIRNRGCGACNVAIASERLQSARKGVFITCANCARFLYIAVSD*
Ga0066905_1017875101	3300005713	Tropical Forest Soil	MSVSSTVIREEELTERLLAQQPAAKATLERLRVRFEGRSGYGAFAPIRNKGCGACKVTIDSQRLQRAQRGVFITCANCARFLYIAAVE*
Ga0066903_1027383022	3300005764	Tropical Forest Soil	VIVALTVIREEELVERLLAQEPAAKATLERLRARFEGKSAYGAFAPIRNSGCGACRVTIASGRLQSARTGVFITCANCARFLYIAAE*
Ga0066903_1033807672	3300005764	Tropical Forest Soil	VIREEELIERLLAQQPSAKAMLERLRVRFEGKSAYGAFAPIRNSGCGACRVTIASGRLQRARTGVFITCANCARFLYIAGE*
Ga0066903_1036406281	3300005764	Tropical Forest Soil	MIIGSIVIREDELIKRLLAQQPSAETTLERLRMRFEGRSAYGAFAPIKNRSCGACKMTVAWARLQRAQTGAFITCANCARFLYIAVE
Ga0066903_1054561111	3300005764	Tropical Forest Soil	MSVSSTVIREEELTERLLAQQPAAKATLERLRVRFEGRSGYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYVAVVE*
Ga0066903_1063841462	3300005764	Tropical Forest Soil	LIERLLEQQPSAKSALERLRMRFEGRGAYGVFAPIRNRGCGACNVAIASEKLQRAQKGVFITCSNCARFLYIAVSD*
Ga0081455_100058804	3300005937	Tabebuia Heterophylla Rhizosphere	VIAALTVISEEELVERLLAQQPAAKATLERLRVRFEGKSAYGAFAPIRNSGCGACRVTIASGRLQRARAGVFITCANCARFLYIAAE*
Ga0075417_101901281	3300006049	Populus Rhizosphere	VSTVIREEELIERLLAQQPSAKTTLERLRMRFEGRSGYGSFAPIRNRGCEACKMTIAWERLQRAQMGALITCANCARFLYIAAVE*
Ga0075432_104384872	3300006058	Populus Rhizosphere	MSVVSTVIREEELIERLLAQQPSAKTTLERLRMRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCARFLYIAAVE*
Ga0075422_100517191	3300006196	Populus Rhizosphere	VIPEEELIERLLAQQPSAKTTLERLRMRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCAR
Ga0075428_1005919682	3300006844	Populus Rhizosphere	MSVSSTVIQEEELTERLLAQQPAAKATLERLRVRFEGRSGYGAFAPIRNRGCGACRVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0075428_1010974132	3300006844	Populus Rhizosphere	MSVVLTVIREEELIERLLAQQPSAKTTLERLRVRFEGRGGYGAFAPIRNRGCEACKMTIAWERLQRAQMGALITCANCARFLYIAAVE*
Ga0075428_1020416941	3300006844	Populus Rhizosphere	TVIREEELIERLLDQQPSAKATLERLRMRFEGRGAYRAFAPISDRSCGACKMTVAWERLQRAQKGAFITCANCARFLYVATVE*
Ga0075421_1000193673	3300006845	Populus Rhizosphere	VIVGLIVIREEELVERLLAQQPAAKAMLERLRVRFEGKSAYRAFAPIRNSGCGACKVTIASGRLQRARTGVFITCANCARFLYIAAE*
Ga0075421_1000249057	3300006845	Populus Rhizosphere	VIVVSNVIREEELIERLLAQQPSAKAALERLRMRFEGKSAYGAFAPIRKSRCGACKVTIASGRLQRARKGVFITCANCARFLYIAAE*
Ga0075421_1001037432	3300006845	Populus Rhizosphere	MDADLIVVQEKELIERLLDQQPSAKATLERLRMRFEGRSAYGAFAPIKNRSCGACKVTVAWERLQRARMGAFITCANCARFLYIAD*
Ga0075421_1012539841	3300006845	Populus Rhizosphere	MSVSSAVIREEELTERLLAQQPAAKATLERLRVRFEGRSDYGAFAPIRNRGCGACRVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0075421_1014271482	3300006845	Populus Rhizosphere	MSVSSTVIREEELTERLLAQQPAAKATLERLRARFEGRSGYGAFAPIRNSSCEACKVTIASQQLQRAKRGVFITCANCARFLYIAAVE*
Ga0075421_1017414542	3300006845	Populus Rhizosphere	VIREEELIERLLAQQPSAKTTLERLRMRFEGRNGYVAFAPIRNRGCEACKMTIAWELLQRAQMGAFITCANCARFLYIAAVE*
Ga0075430_1006234192	3300006846	Populus Rhizosphere	MGVVLTVIREEELIERLLDQQPSAKATLERLRIRFEGKGSYRAFAPISDRSCGACKMTVAWERLQRAQKGAFITCANCARFLYVATVE*
Ga0075430_1012519651	3300006846	Populus Rhizosphere	MSVVSTVIREEELIERLLAQQPSAKTTLERLRMRFEGRNGYVAFAPIRNRGCEACKMTIAWELLQRAQMGAFITCANCARFLYIAAVE*
Ga0075430_1016564791	3300006846	Populus Rhizosphere	MSVSSTVIQEEELTERLLAQQPAAKATLERLRARFEGRSGYGAFAPIRNSSCEACKVTIASQHLQRAKRGVFITC
Ga0075431_1001971224	3300006847	Populus Rhizosphere	QQPSAKAALERLRMRFEGKSAYGAFAPIRKSGCGACKVTIASGRLQRARKGVLITCANCARFLYIAAE*
Ga0075431_1002149381	3300006847	Populus Rhizosphere	VIVGLTVIREEELVERLLAQQQAAKATLERLRVRFEGKSAYGAFAPIRNSGCGACRVTIASGRLQRARTGAFITCANCARFL*
Ga0075431_1003491622	3300006847	Populus Rhizosphere	MSVSSTVIREEELTERLLAQQPAAKATLERLRVRFEGRSDYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0075431_1008570352	3300006847	Populus Rhizosphere	MGVVLTVIREEELIERLLDQQPSANATLERLRMRFEGRSAYLAFAPISDRSCGACKMTVAWERLQCAQKGAFITCANCARFLYVATVE*
Ga0075425_1016799151	3300006854	Populus Rhizosphere	LIERLLAQQPSAKALLERLRVRFEGKSAYGAFAPIMNSGCGACKVTIASGRLQRARTGVFITCANCARFLYITAE*
Ga0075424_1017290042	3300006904	Populus Rhizosphere	VIREEELVERLLAQQQAAKATLERLRVRFEGKSAYGAFAPIRNSGCGACRVTIASGRLQRARTGAFITCANCARFL*
Ga0075419_106262802	3300006969	Populus Rhizosphere	MSVSSTVIQEEELTERLLAQQPAAKATLERLRVRFEGRSGYGAFAPIRNRGCGACRVTIASQGLQRARRGVFITCANCARFLYIAVVE*
Ga0111539_115264041	3300009094	Populus Rhizosphere	MGVVLTVIREEELIERLLDQQPSAKATLERLRMRFEGRGAYRAFAPIRERNCGACKMTIAWERLQRARKGAFITCANCARFLYVAADE*
Ga0075418_110182952	3300009100	Populus Rhizosphere	MGVVLTVIRDEELIERLLDQQPSAKATLERLRMRFEGRGAYRAFAPISDRSCGACKMTVAWERLQCAQKGAFITCANCARFLYVATVE*
Ga0075418_129079881	3300009100	Populus Rhizosphere	ELIERLLAQQPSAKTTLERLRMRFEGRSGYGSFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCARFLYIAAVE*
Ga0114129_103129712	3300009147	Populus Rhizosphere	MGVVLTVIREEELIERLLDQQPSAKATLERLRMRFEGRGAYRAFAPIRDRSCGACKMTIAWERLQRAQKGAFITCANCARFLYVAADE*
Ga0114129_131393352	3300009147	Populus Rhizosphere	STVIQEEELTERLLAQQPAAKATLERLRVRFEGRSGYGAFAPIRNRGCGACRVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0111538_106447902	3300009156	Populus Rhizosphere	MSVSSTVIREEELTERLLAQQPAAKATLERLRARFEGRSDYGAFAPIRNRGCGACRVTIASQGLQRARRGVFITCANCARFLYIAVVE*
Ga0075423_128506122	3300009162	Populus Rhizosphere	VIREEELVERLLAQQQAAKATLERLRVRFEGKSAYGAFAPHRHSGCGACRVTIASGRLQRARTGAFITCANCARFL*
Ga0126374_102661402	3300009792	Tropical Forest Soil	MNVGTNLIREDELIERLLDQQPSAKSALERLRVRFEGDGAYGVFAPIRNRGCGACNVAIASGSLQRARKGVFITCANCARFLYIAVAD*
Ga0126374_103880841	3300009792	Tropical Forest Soil	MSKSKEIGEMSVSSTVIREEELTERLLAQQPAAKATLERLRVRFEGRSAYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0126380_107630532	3300010043	Tropical Forest Soil	VIVALTVIREEELVERLLAQQPAAMATLERLRVRFEGNSTYGAFAPIRNSGCGACRVTIASGRLQRARTGVFITCANCARFLYIAAE*
Ga0126380_107895042	3300010043	Tropical Forest Soil	LAQQPAAKATLERLRVRFEGKSAYGAFAPIRNSGCGACRVTIASGELQRARTGVFITCANCARFLYIAAE*
Ga0126380_119225271	3300010043	Tropical Forest Soil	VIVVSTVIREEELIERLLAQQPSAKAMLERLRMRFEGKSAYGAFAPIRNSGCGACKVTIASGRLQSARTGVFITCANCARFLYIAGE*
Ga0126380_119742541	3300010043	Tropical Forest Soil	MSVDSNAVLEGELIERLLEQQPSAKSALDRLRVRFQGKSGYGVFAPIRNRGCGACKVAIASAKLQRAQKGVFITCASCARFLYIADSD*
Ga0126384_100547893	3300010046	Tropical Forest Soil	MNVGTNLIREDELIERLLDQQPSAKSALERLRVRFEGDSAYGVFAPIRNRGCGACNVAIASEKLQRAQKGVFITCANCARFLYIAVSD*
Ga0126384_106274551	3300010046	Tropical Forest Soil	IREEELTERLLAQQPAAKATLERLRVRFEGRSDYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0126382_100812443	3300010047	Tropical Forest Soil	MDVGLNVVREDELIERLLEQQPSAKSALERLRVRFGGGSVYGVFAPIRNRGCGACNVAIASERLQSARKGVFITCANCARFLYIAVSD*
Ga0126382_102009122	3300010047	Tropical Forest Soil	MSVNSKVNREEELIKQLLEQYPSATATLDRLRIRFEGRGTYGAFAPIKNRGCGACNMTIASVRLQLARMGVFINCANCSRFLYIIAAD*
Ga0126382_102259792	3300010047	Tropical Forest Soil	MSVSSTVIREEELTERLLAQQPAAKATLERLRVRFEGRSAYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0126376_104929112	3300010359	Tropical Forest Soil	VIVALTVIREEELVERLLAQQPAAKATLERLRVRFEGKSAYGAFAPIRNSGCGACRVTIASGRLQRARTGVFITCANCARFLYIAAE*
Ga0126372_100506962	3300010360	Tropical Forest Soil	VIVVSTVIREEELIERLLAQQPSAKAMLERLRLRFEGKSAYGAFAPIRNSGCGACKVTIASGRLQRARTGVFITCANCARFLYIAGE*
Ga0126377_100047345	3300010362	Tropical Forest Soil	VIVDLTVNREEELVERLLAQQPAAKATLERLRVRFEGEGAYGAFAPIRNSGCGACRVTIASGRLQRARTGVFITCANCARFLYIAAE*
Ga0126377_100221103	3300010362	Tropical Forest Soil	MIVGSTVIQEEELIERLLTQQPSAKATLERLRMRFEGRSAYGAFAPIGNKCCRACRVTIAWERLQRARTGMFITCANCARFLYVAAE*
Ga0126377_101335853	3300010362	Tropical Forest Soil	MSVNSKVNREEELIKQLLEQYPSATATLDRLRIRFEGRGTYGAFAPIKNRGCGACNMTIAAVRLQLARMGVFINCANCSRFLYITAAD*
Ga0126377_102741752	3300010362	Tropical Forest Soil	MSKLKEISMNVDSKVIREEELIERLLEQHPSAKVTLERLRIRFEGRSTHGAFAPIKNKGCGACNVTIASGRLQLARMGVFINCANCSRFLYIASAD*
Ga0126377_103042282	3300010362	Tropical Forest Soil	MSVSSAVIREEELTERLLAQQPAAKATLERLRVRFEGRSDYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYVAAVE*
Ga0126377_106966282	3300010362	Tropical Forest Soil	MSKSKEIGEMSVSSTVIREEELTERLLAQQPAAKATLERLRVRFEGSSVYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0126377_107519831	3300010362	Tropical Forest Soil	MNVGSIVIREDELIKRLLAQQPSAEATLERLRMRFEGRSAYGAFAPIRNRSCGACKMTVAWERLQRAQTGAFITCANCARFLYIAVED*
Ga0126379_105426923	3300010366	Tropical Forest Soil	VIVISTVIREEELIERLLAQQPSAKAMLERLRVRFEGKSAYGAFAPIRNSGCGACRVTIASGRLQSARTGVFITCANCARFLYIAGE*
Ga0126383_101401302	3300010398	Tropical Forest Soil	MNVGSNVIREDELIERLLEQQPSAKSALERLRMRFEGRGAYGVFAPIRNRGCGACNVAIASERLQSARKGVFITCANCARFLYIAVSD*
Ga0134123_117145642	3300010403	Terrestrial Soil	MSVVLTVIREEELIERLLAQQPSAKTTLERLRMRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCARFLYIAAVE*
Ga0124844_11568242	3300010868	Tropical Forest Soil	VIVGLTVIREEELVERLLAQQPAAKATLERLRVRFEGKSAYGAFAPIRNSGCGACRVTIASEWLQRARTGVFITCANCARFLYI
Ga0124844_11923011	3300010868	Tropical Forest Soil	VIVGLTVIREEELVERLLAQQPAAKATLERLRVRFEGKSACGAFAPIRNSGCGACRVTIASVRLQCARTGVFITCANCARFLYTRFLYI
Ga0120192_100147022	3300012021	Terrestrial	MSKSKEICEMSVSSTAIREEELTERLLAQQPAAKATLERLRVRFEGGSGYGAFAPIRNRGCGACKVTIASQRLQRAQRGVFITCANCARFLYIAAVE*
Ga0154003_10003917	3300012081	Attine Ant Fungus Gardens	VIIASTVIREEELTERLLAQQPSAKATLERLRARFGGGSGYGAFAPIRNSGCGACKMAIASERLQRARKGVFITCANCARFLYIAAAE*
Ga0154003_10052142	3300012081	Attine Ant Fungus Gardens	VIVVSTVIREEELIERLLAQQPSAKAMMERLRLRFEGKSAYGAFAPIRNSGCGACRVAIASGRLQRARTGVFITCANCARFLYISAE*
Ga0154003_10129154	3300012081	Attine Ant Fungus Gardens	MDVDSIVVQEKELIERLLDQQPSAKATLERLRMRFEGRSAYGAFAPIRNRSCGACKMTVAWERLQRARMGAFITCANCARFLYIAD*
Ga0137374_100035534	3300012204	Vadose Zone Soil	MSVVSTVIREEELIERLLAQQPSAKATLERLRARFEGKDGYGAFAPIRNTGCGACKMTIAWERLQCARTGVFIACANCARFLYVAAVE*
Ga0137374_110742512	3300012204	Vadose Zone Soil	AQQPAAKATLERLRVRFEGRSDYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0137369_100340506	3300012355	Vadose Zone Soil	MSKSKEICEMSVSSTVIREEELTERLLAQQPAAKATLERLRVRFEGRSDYGAFAPIRNRGCGACKVTIASQQIQRAQRGVFITCANCARFLYIAAVE*
Ga0137375_1000501612	3300012360	Vadose Zone Soil	MSKSKEICEMSVSSTVIREEELTERLLAQQPAAKATLERLRVRFEGRSDYGAFAPIRNRGCGACKVTIASQGLQRAQRGVFITCANCARFLYIAAVE*
Ga0137410_100122295	3300012944	Vadose Zone Soil	MIVGLTVIQEEELIKRLLAQQPSAKAPLERLRLRFEGRSAYGAFAPIRNRSCGACKMTVAWERLQRAQMGSFITCANCARFLYIA*
Ga0126375_104649592	3300012948	Tropical Forest Soil	VIREEELTERLLAQQPAAKATLERLRVRFEGRSDYGAFAPIRNRGCGACKVTIDSQGLQRAERGVFITCANCARFLYIAAVE*
Ga0126369_100161785	3300012971	Tropical Forest Soil	VIVVSTVIREEELIERLLAQQPSAKAMLERLRVRFEGKSAYGAFAPIRNSGCGACKVTIASGRLQRARTGVFITCANCARFLYIAGE*
Ga0126369_101184304	3300012971	Tropical Forest Soil	LKGIYEMGDGSRVIQEKELIERLLEQQPSAKATLERLRVRFESKGVYGAFAPIRSRGCGACNVAIATSRLQRAQKGVFITCANCARYLYIAAE*
Ga0182034_118754452	3300016371	Soil	ERLLEQQPSAKATLERLRVRFESKGVYGAFAPIRSRGCGACNVAIATSRLQRAQKGVFITCANCARYLYIAAE
Ga0187893_100754344	3300019487	Microbial Mat On Rocks	MSVGVNVIQEEELIRRLLDQQPSAKATLERLRARFEGGSAYGAFAPIKNRGCGACNVAIASGRLQRAQMGMFITCANCARFLYVAVAD
Ga0209799_11329352	3300027654	Tropical Forest Soil	LIERLLEQQPSAKSALERLRMRFEGRGAYGVFAPIRNRGCGACNVAIASEKLQRAQKGVFITCANCARFLYI
Ga0209814_100425563	3300027873	Populus Rhizosphere	MSVVSTVIPEEELIERLLAQQPSAKTTLERLRMRFEGRSGYGSFAPIRNRGCEACKMTIAWERLQRAQMGALITCANCARFLYIAAVE
Ga0209465_100560962	3300027874	Tropical Forest Soil	VIREEELIERLLAQQPSAKAMLERLRVRFEGKSAYGAFAPIRNSGCGACKVTIASGRLQCARTGVFITCANCARFLYIAGE
Ga0207428_112586001	3300027907	Populus Rhizosphere	MSVSSTVIQEEELTERLLAQQPAAKATLERLRVRFEGRSGYGAFAPIRNRGCGACRVTIASQGLQRARRGVFITCANCARFLYIAVVE
Ga0209382_100154797	3300027909	Populus Rhizosphere	VIVGLIVIREEELVERLLAQQPAAKAMLERLRVRFEGKSAYRAFAPIRNSGCGACKVTIASGRLQRARTGVFITCANCARFLYIAAE
Ga0209382_100179682	3300027909	Populus Rhizosphere	VIVVSNVIREEELIERLLAQQPSAKAALERLRMRFEGKSAYGAFAPIRKSRCGACKVTIASGRLQRARKGVFITCANCARFLYIAAE
Ga0209382_100810192	3300027909	Populus Rhizosphere	MDADLIVVQEKELIERLLDQQPSAKATLERLRMRFEGRSAYGAFAPIKNRSCGACKVTVAWERLQRARMGAFITCANCARFLYIAD
Ga0209382_109601632	3300027909	Populus Rhizosphere	MGVVLTVIRDEELIERLLDQQPSAKATLERLRMRFEGRGAYRAFAPIRDRSCGACKMTIAWERLQRAQKGAFITCANCARFLYVAADE
Ga0209382_118326642	3300027909	Populus Rhizosphere	VIREEELIERLLAQQPSAKTTLERLRMRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCARFLYIAAVE
Ga0209382_121840572	3300027909	Populus Rhizosphere	EEELTERLLAQQPAAKATLERLRVRFEGRSDYGAFAPIRNRGCGACRVTIASQGLQRAQRGVFITCANCARFLYIAAVE
Ga0310915_109677021	3300031573	Soil	EKELIERLLEQQPSAKATLERLRVRFESKGVYGAFAPIRSRGCGACNVAIATSRLQRAQKGVFITCANCARYLYIAAE
Ga0307406_117298221	3300031901	Rhizosphere	MDVDLIVVQEKELIERLLDQQPSAKATLERLRMRFEGRSAYGAFAPIKNRSCGACKVTVAWERLQRARMGAFITCANCARFLYIAD
Ga0310900_106299661	3300031908	Soil	MSVVLTVIREEELIDRLLAQQPSAKTTLERLRVRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCARFLYIAAVE
Ga0310906_104503212	3300032013	Soil	MSVVLTVIREEELIERLLAQQPSAKTTLERLRVRFEGRGGYGAFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCARFLYIAAVE
Ga0310890_102025983	3300032075	Soil	MSVVSTVIREEELIERLLAQQPSAKTTLERLRMRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRARMGAFITCANCARFLYIAAVE
Ga0306920_1020059711	3300032261	Soil	MGDGSRVIQEKELIERLLEQQPSAKATLERLRVRFESKGVYGAFAPIRSRGCGACNVAIATSRLQRAQKGVFITCANCARYLYIAAE
Ga0314786_061427_6_272	3300034664	Soil	MSVVSTVIREEELIERLLAQQPSAKTTLERLRVRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCARFLYIAAVE
Ga0314793_002353_1665_1931	3300034668	Soil	MSVVLTVIREEELIERLLAQQPSAKTTLERLRMRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCARFLYIAAVE
Ga0314797_041141_13_243	3300034672	Soil	LIERLLAQQPSAKTTLERLRMRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRAQMGAFITCANCARFLYIAAVE
Ga0314802_022532_41_289	3300034677	Soil	VIREEELIERLLAQQPSAKTTLERLRMRFEGRSGYGAFAPIRNRGCEACKMTIAWERLQRARMGAFITCANCARFLYIAAVE
Ga0314803_001134_1874_2140	3300034678	Soil	MSVVLTVIREEELIDRLLAQQPSAKTTLERLRVRFEGRSGYGAFAPIRNRGCEACKMTIAWELLQRAQMGAVITCANCARFLYIAAVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081520

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences