Metagenome Family F081552

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F081552
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	61 residues
Representative Sequence	ADDLDAPERRTQLLSGLEALVPEVKGLRGAREALALLLADHDLAWQAYATSLLAEALADD
Number of Associated Samples	99
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.88 %
% of genes near scaffold ends (potentially truncated)	98.25 %
% of genes from short scaffolds (< 2000 bps)	93.86 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (78.947 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.526 % of family members)
Environment Ontology (ENVO)	Unclassified (42.982 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.509 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
e.11.1.0: automated matches	d3ilwa_	3ilw	0.70104
a.93.1.1: CCP-like	d2euta_	2eut	0.69459
a.93.1.0: automated matches	d5jhxa1	5jhx	0.69312
e.8.1.8: Splicing factor Prp8 RT domain	d4i43b4	4i43	0.67325
a.93.1.0: automated matches	d5jhxa2	5jhx	0.66793

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF01494	FAD_binding_3	17.54
PF01850	PIN	6.14
PF13673	Acetyltransf_10	2.63
PF07883	Cupin_2	0.88
PF00583	Acetyltransf_1	0.88
PF00990	GGDEF	0.88
PF12867	DinB_2	0.88
PF00440	TetR_N	0.88
PF00753	Lactamase_B	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	35.09
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	17.54
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	17.54
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	17.54

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.95 %
Unclassified	root	N/A	21.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.95 %
Unclassified	root	N/A	21.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.95 %
Unclassified	root	N/A	21.05 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	64.91 %
Unclassified	root	N/A	21.05 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	64.04 %
Unclassified	root	N/A	21.05 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	44.74 %
Unclassified	root	N/A	21.05 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	11.40 %
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	42.98 %
Unclassified	root	N/A	21.05 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	11.40 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.75 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	42.98 %
Unclassified	root	N/A	21.05 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	11.40 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.75 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	42.98 %
Unclassified	root	N/A	21.05 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	11.40 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.75 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	42.98 %
Unclassified	root	N/A	21.05 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	11.40 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.88 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	42.98 %
Unclassified	root	N/A	21.05 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	11.40 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.88 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9171458	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
2228664021\|ICCgaii200_c1089574	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
2228664021\|ICCgaii200_c1089846	Not Available	1270	Open in IMG/M
2228664021\|ICCgaii200_c1090017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	1094	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2192601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2267463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13646902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300000956\|JGI10216J12902_113214782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300001977\|JGI24746J21847_1057397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	554	Open in IMG/M
3300003992\|Ga0055470_10053628	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300003996\|Ga0055467_10175512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300003997\|Ga0055466_10160678	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300004463\|Ga0063356_104080713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300004463\|Ga0063356_105278681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300004480\|Ga0062592_101023984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300005093\|Ga0062594_100376984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	1131	Open in IMG/M
3300005093\|Ga0062594_101451749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300005328\|Ga0070676_11371523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300005330\|Ga0070690_101601931	Not Available	528	Open in IMG/M
3300005331\|Ga0070670_101432148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300005336\|Ga0070680_100267030	Not Available	1448	Open in IMG/M
3300005336\|Ga0070680_101007789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300005337\|Ga0070682_100344167	Not Available	1109	Open in IMG/M
3300005337\|Ga0070682_101738836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300005341\|Ga0070691_10143434	Not Available	1219	Open in IMG/M
3300005345\|Ga0070692_10393748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	873	Open in IMG/M
3300005354\|Ga0070675_101641415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300005365\|Ga0070688_100461268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	952	Open in IMG/M
3300005365\|Ga0070688_101254214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300005535\|Ga0070684_100505471	Not Available	1119	Open in IMG/M
3300005548\|Ga0070665_101274541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300005563\|Ga0068855_102490772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300005564\|Ga0070664_100405711	Not Available	1247	Open in IMG/M
3300005718\|Ga0068866_10180438	Not Available	1247	Open in IMG/M
3300005841\|Ga0068863_101043401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	821	Open in IMG/M
3300006038\|Ga0075365_10250313	Not Available	1245	Open in IMG/M
3300006178\|Ga0075367_10342498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	943	Open in IMG/M
3300006881\|Ga0068865_100243650	Not Available	1416	Open in IMG/M
3300006894\|Ga0079215_11113270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300009094\|Ga0111539_12533167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595	Open in IMG/M
3300009148\|Ga0105243_12764416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300009148\|Ga0105243_12812635	Not Available	527	Open in IMG/M
3300009157\|Ga0105092_10818572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300010371\|Ga0134125_10569883	Not Available	1252	Open in IMG/M
3300010371\|Ga0134125_11463219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300010373\|Ga0134128_13057119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300012093\|Ga0136632_10082066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	1492	Open in IMG/M
3300012185\|Ga0136619_10007760	All Organisms → cellular organisms → Bacteria	4205	Open in IMG/M
3300012684\|Ga0136614_10812427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300012895\|Ga0157309_10103606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300012898\|Ga0157293_10074103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300012909\|Ga0157290_10171502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300012943\|Ga0164241_10553411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	831	Open in IMG/M
3300012958\|Ga0164299_10524186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	793	Open in IMG/M
3300012987\|Ga0164307_11908691	Not Available	503	Open in IMG/M
3300012989\|Ga0164305_11770037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300013096\|Ga0157307_1162552	Not Available	528	Open in IMG/M
3300013102\|Ga0157371_11121868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300013297\|Ga0157378_10242934	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300013308\|Ga0157375_10288869	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300014271\|Ga0075326_1134608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300014302\|Ga0075310_1147840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300014326\|Ga0157380_10121661	All Organisms → cellular organisms → Bacteria	2212	Open in IMG/M
3300014969\|Ga0157376_11420272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300015077\|Ga0173483_10023103	Not Available	2212	Open in IMG/M
3300015373\|Ga0132257_100683569	Not Available	1274	Open in IMG/M
3300015374\|Ga0132255_103560795	Not Available	662	Open in IMG/M
3300017789\|Ga0136617_10907301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300018476\|Ga0190274_12418034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300018481\|Ga0190271_13544640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300019362\|Ga0173479_10032327	All Organisms → cellular organisms → Bacteria	1595	Open in IMG/M
3300022883\|Ga0247786_1029454	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300022898\|Ga0247745_1006510	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300022901\|Ga0247788_1003035	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300023062\|Ga0247791_1040786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300023077\|Ga0247802_1041132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300024055\|Ga0247794_10170258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300024055\|Ga0247794_10318232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300025321\|Ga0207656_10400771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300025559\|Ga0210087_1020093	Not Available	1365	Open in IMG/M
3300025899\|Ga0207642_10994910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300025900\|Ga0207710_10679833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300025907\|Ga0207645_11055200	All Organisms → cellular organisms → Bacteria → Terrabacteria group	549	Open in IMG/M
3300025909\|Ga0207705_11521097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300025912\|Ga0207707_10622186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	912	Open in IMG/M
3300025918\|Ga0207662_10435622	Not Available	894	Open in IMG/M
3300025924\|Ga0207694_10686374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	863	Open in IMG/M
3300025925\|Ga0207650_11147151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300025932\|Ga0207690_10280467	Not Available	1298	Open in IMG/M
3300025932\|Ga0207690_10498958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	984	Open in IMG/M
3300025934\|Ga0207686_10192046	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300025935\|Ga0207709_11390495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300025936\|Ga0207670_11915115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300025938\|Ga0207704_10439395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	1039	Open in IMG/M
3300025972\|Ga0207668_10547711	Not Available	1002	Open in IMG/M
3300025981\|Ga0207640_10056129	All Organisms → cellular organisms → Bacteria	2583	Open in IMG/M
3300025986\|Ga0207658_11867658	Not Available	548	Open in IMG/M
3300026023\|Ga0207677_10030038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3463	Open in IMG/M
3300026035\|Ga0207703_10216999	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300026035\|Ga0207703_12241127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300026041\|Ga0207639_11486187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300026075\|Ga0207708_10905894	Not Available	763	Open in IMG/M
3300026088\|Ga0207641_11804453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300026118\|Ga0207675_101091573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	818	Open in IMG/M
3300028589\|Ga0247818_10421605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	902	Open in IMG/M
3300028592\|Ga0247822_11037880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300028809\|Ga0247824_10611493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300031731\|Ga0307405_10901688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300031847\|Ga0310907_10319750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300031847\|Ga0310907_10692818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300031847\|Ga0310907_10796702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300032179\|Ga0310889_10791280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300033550\|Ga0247829_10519750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	987	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.65%
Host-Associated	Host-Associated	40.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.75%
Plants	Host-Associated → Plants	40.35%
Aquatic	Environmental → Aquatic	7.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.67%
Freshwater	Environmental → Aquatic → Freshwater	4.39%
Marine	Environmental → Aquatic → Marine	3.51%
Roots	Host-Associated → Plants → Roots	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.91%
Loam	Environmental → Terrestrial → Soil → Loam	12.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.53%
Ice	Environmental → Aquatic → Freshwater → Ice	3.51%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.75%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.02%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	3.51%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.14%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.39%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	3.51%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.51%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.63%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.75%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01272500	2088090015	Soil	PERRAELRIGLVSLRGQVAGLRGAREALQLLLADDDLAWQTFATALLAEALAEE
ICCgaii200_10895741	2228664021	Soil	GRAATALADDLDTPERRAELRIGLVSLRGQVAGLRGAREALQLLLADDDLAWQTFATALLAEALAEE
ICCgaii200_10898462	2228664021	Soil	AELRIGLVSLRGQVAGLRGAREALQLLLADDDLAWQTFATALLAEALAEE
ICCgaii200_10900172	2228664021	Soil	RAAAALADDLDTEERRLRLRAGLESLSGDVAGLRGAREALGLLLSDADLAWRAYATSLLAEALAEE
ICChiseqgaiiDRAFT_21926012	3300000033	Soil	LSGLEALVPEVKGLRGAREALALLLADHDLAWQAYATSLLAEALADD*
ICChiseqgaiiDRAFT_22674632	3300000033	Soil	ALADDLDTXERRLRLRAGLESLSGDVAGLRGAREALGLLLSDADLAWRAYATSLLAEALAEE*
ICChiseqgaiiFebDRAFT_136469022	3300000363	Soil	GGDPHRQLDPFGRAVTAIANDLDSRERRAALRTGLEALRNEVAGLRGAREALRLLLDDDDLAWTVYATSLLAEALAEE*
JGI11643J12802_114734953	3300000890	Soil	GLESLSGDVAGLRGAREALGLLLSDADLAWRAYATSLLAEALAEE*
JGI10216J12902_1132147822	3300000956	Soil	RAATALADDLDAPERRMQLLSGLEALVPEVKGLRGAREALALLLADHDLAWQAYATSLLAEALADD*
JGI24746J21847_10573973	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	QLLSGLEALLPEVEGLRAAREALVLLLTDHDLAWKAYATSLLAEALAEE*
Ga0055470_100536281	3300003992	Natural And Restored Wetlands	GGDPHRPLDPFGRAASALADDLDTPERRAELHAGLEAIRTDVEGLRGARESLGLLLSDADLAWRVYATSLIAEALADE*
Ga0055467_101755122	3300003996	Natural And Restored Wetlands	LDPFGRAATALADDLDAPARRAALQRGLEALRDEVAGLHGAREALALLLGDDDLAWKVYATSLLAEALAEE*
Ga0055466_101606782	3300003997	Natural And Restored Wetlands	TGLESLRDEVAGLRGAHECLRLLLTDDDLAWRTFATSLLAEALAEE*
Ga0063356_1040807132	3300004463	Arabidopsis Thaliana Rhizosphere	HRPLDPFGRAATALAADIDAPERRMQLRAGLASLRDEVAGLRGARESLGLLLSDDDLAWQSFATSLLAEALADEL*
Ga0063356_1052786811	3300004463	Arabidopsis Thaliana Rhizosphere	ERRLRLRAGLESLSGDVAGLRGAREALGLLLSDADLAWRAYATSLLAEALAEE*
Ga0062592_1010239842	3300004480	Soil	DPFGRAATALADDLDSPERRAQLRAGLESLREEVAGLRGAREALQVLLSDDDLAWQTFATSILAEALAEE*
Ga0062594_1003769841	3300005093	Soil	LDPFGRAATALAADIDAPERRMQLRAGLASLRDEVAGLRGARESLGLLLSDDDLAWQSFATSLLAEALADE*
Ga0062594_1014517491	3300005093	Soil	RRAVLRRGLEALRDEVAGLRGARESLRLLLADADLAWRVYATSLLAEELAQE*
Ga0070676_113715232	3300005328	Miscanthus Rhizosphere	GDPRRRLDPFGRAATALADDLDAPERRAQLLSGLEALVPEVEGLRGAREALALLLADHELAWQAYATSLLAEALADD*
Ga0070690_1016019311	3300005330	Switchgrass Rhizosphere	PFGRAATALADDLDAAERRAQLLSGLEALLPEVEGLRAAREALVLLLTDHDLAWKAYATSLLAEALAEE*
Ga0070670_1014321482	3300005331	Switchgrass Rhizosphere	TGLESLREEAAGLRGAREALQLLLSDGDLAWQTFATSILAEALAEE*
Ga0070680_1002670301	3300005336	Corn Rhizosphere	RAATALADDLDAPERRRQLRAGLESLRDEVEGLRGARESLGLLLSDDDLAWQSFATSLLAEALADEL*
Ga0070680_1010077891	3300005336	Corn Rhizosphere	ADDLDTPERRTQLQAGLGALVDEVAGLRGARESLELLRADPDLAWTAYATSLLAEALAED
Ga0070682_1003441672	3300005337	Corn Rhizosphere	GLESLREEVAGLRGARESLGLLLADDTLAWQTFATSLLAEALANDYI*
Ga0070682_1017388361	3300005337	Corn Rhizosphere	GLEALVPEVKGLRGAREALALLLADHDLAWQAYATSLLAEALADD*
Ga0070691_101434342	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	GRAATALADDLDAPERRAQLREGLESLREEVAGLRGARESLGLLLADDTLAWQTFATSLLAESLADE*
Ga0070692_103937481	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	ADDLDAPERRAQLLSGLEALVPEVEGLRGAREALALLLADHELAWQAYATSLLAEALADD
Ga0070675_1016414151	3300005354	Miscanthus Rhizosphere	APERRAQLRDGLESLQEEVAGLRGARESLGLLLADDTLAWQTFATSLLAEALANDYI*
Ga0070688_1004612681	3300005365	Switchgrass Rhizosphere	FGRAASALADDLDTPERRTQLQAGLGALVDEVAGLRGARESLELLRADPDLAWTAYATSLLAEALAED*
Ga0070688_1012542142	3300005365	Switchgrass Rhizosphere	DPFGRAATALADDLDAPERRRQLRAGLESLRDEVAGLRGAGESLGLLLSDDDLAWQSFATSLLAEALADEL*
Ga0070684_1005054711	3300005535	Corn Rhizosphere	ADDLDAPERRTQLLSGLEALVPEVKGLRGAREALALLLADHDLAWQAYATSLLAEALADD
Ga0070665_1012745411	3300005548	Switchgrass Rhizosphere	ATALADDLDAPERRRQLRAGLESLRDEVEGLRGARESLGLLLSDDDLAWQSFATSLLAEALADEL*
Ga0068855_1024907722	3300005563	Corn Rhizosphere	RRQLRAGLESLRDEVEGLRGARESLGLLLSDDDLAWQSFATSLLAEALADEL*
Ga0070664_1004057112	3300005564	Corn Rhizosphere	TQLLSGLEALVPEVKGLRGAREALALLLADHDLAWQAYATSLLAEALADD*
Ga0068866_101804382	3300005718	Miscanthus Rhizosphere	TPERRAQLLSGLEALLPEVEGLSGAREALVLLLTDHDLAWKAYATSLLAEALAEE*
Ga0068863_1010434011	3300005841	Switchgrass Rhizosphere	RSGLESLREEAAGLRGAREALRLLLSDEDLAWQTFATSILAEALAEE*
Ga0075365_102503132	3300006038	Populus Endosphere	GVSRSSASALAEDLDTPERRAVLRRGLEALRDEVAGLRGARESLRLLLADADLAWRVYATSLLAEELAQE*
Ga0075367_103424981	3300006178	Populus Endosphere	AQLRSGLESLREEAAGLRGAREALRLLLSDEDLAWQTFATSILAEALAEE*
Ga0068865_1002436501	3300006881	Miscanthus Rhizosphere	RRAQLREGLESLREEVAGLRGARESLGLLLADDTLAWQTFATSLLAEALANDYI*
Ga0079215_111132702	3300006894	Agricultural Soil	GRAATSLADDLDAPERRDELRRGLESLREEVAGLRGAREALALLLADADLAWRVYATSLLAEALAEE*
Ga0111539_125331671	3300009094	Populus Rhizosphere	RRAELRVGLESLRKDVAGLRGARESLALLLSDDDLAWQSYATALLAEALAEA*
Ga0105243_127644161	3300009148	Miscanthus Rhizosphere	LRAGLESLRDEVEGLRGARESLGLLLSDDDLAWQSFATSLLAEALADEL*
Ga0105243_128126352	3300009148	Miscanthus Rhizosphere	VAGGDPHRALDPFGRAATALANDLDSAERRETLRHGLEALRDEVAGLRGAREALALLLSDADLAWQVYATSLLAEELAEE*
Ga0105092_108185721	3300009157	Freshwater Sediment	DAPERRALLRAGLDALRDDVAGLRGARESLALLLSDPDLAWRAYAASLLAEALAEG*
Ga0134125_105698832	3300010371	Terrestrial Soil	EADVKRRMQLRAGLASLRDEVAGLRGARESLGLLLSDDDLAWQSFATSLLAEALADEL*
Ga0134125_114632191	3300010371	Terrestrial Soil	QLLSGLEALVPEVEGLRGAREALALLLADHELAWQAYATSLLAEALADD*
Ga0134128_130571192	3300010373	Terrestrial Soil	PLDPFGRAATALAADIDAPERRMQLRAGLASLRDEVAGLRGARESLGLLLSDDDLAWQSFATSLLAEALADEL*
Ga0136632_100820661	3300012093	Polar Desert Sand	RAGLVSLRGEVAGVRGPRESLALLLSDEELAWNAYATALLAEALAEHI*
Ga0136619_100077601	3300012185	Polar Desert Sand	DPFGRATTALAEDLDTEERRSMLVAGLELLRDEIAGLRGARESLALLLSDQDLAWQAYATALLAEALAEE*
Ga0136614_108124271	3300012684	Polar Desert Sand	PEHRAALRAGLVSLRGEVAGVRGPRESLALLLSDEELAWNAYATALLAEALAEHI*
Ga0157309_101036062	3300012895	Soil	DTEERRLRLRAGLESLSGDVAGLRGAREALGLLLSDADLAWRAYATSLLAEALAEE*
Ga0157293_100741032	3300012898	Soil	RAATALADDLDTEERRLRLRAGLESLSGDVAGLRGAREALGLLLSDADLAWRAYATSLLAEALAEE*
Ga0157290_101715022	3300012909	Soil	FGRAATALADDLDTEERRLRLRAGLESLSGDVAGLRGAREALGLLLSDADLAWRAYATSLLAEALAEE*
Ga0164241_105534111	3300012943	Soil	RRQLRAGLESLRDEVEGLRGARESLSLLLSDDDLAWQSFATSLLAEALADEL*
Ga0164299_105241862	3300012958	Soil	PLDPFGRAATALADDLDAPERRAELRVGLESLRKDVAGLRGARESLALLLSDDDLAWQSYATALLAEALAEA*
Ga0164307_119086911	3300012987	Soil	PHRPLDPFGRAATALADDLDRRERRTQLRAGLESLRDEVAGLRGARESLGLLLSDGDLAWLSYATALLAEALAEE*
Ga0164305_117700371	3300012989	Soil	DDLDTPERRTQLQAGLGALVDEVAGLRGARESLALLLADPDLAWTAYATSLLAEALAED*
Ga0157307_11625522	3300013096	Soil	DDLDTAERRAQLLSGLEALLPEVEGLSGAREALVLLLTDHDLAWKAYATSLLAEALAEE*
Ga0157371_111218682	3300013102	Corn Rhizosphere	LADDLDSPERRAQLRSGLESLREEAAGLRGAREALRLLLSDEDLAWQTFATSILAEALAEE*
Ga0157378_102429344	3300013297	Miscanthus Rhizosphere	DDLDTAARRAQLLSGLEALLPEVEGLRGAREALVLLLTDHDLAWKAYATSLLAEALAEE*
Ga0157375_102888691	3300013308	Miscanthus Rhizosphere	DAPERRAQLLSGLEALVPEVEGLRGAREALALLLADHELAWQAYATSLLAEALADD*
Ga0075326_11346082	3300014271	Natural And Restored Wetlands	ALADDLDAPERRATLRRGLEALLAEVAGLRGARESLALLLGDDDLAWKVYATSLLAEALAEE*
Ga0075310_11478402	3300014302	Natural And Restored Wetlands	LRAGLESLRDEVARLRGARESLALLLSDDDLAWQTFATSLLAEALADE*
Ga0157380_101216613	3300014326	Switchgrass Rhizosphere	AGLGALVDEVAGLRGARESLELLRADPDLAWTAYATSLLAEALAED*
Ga0157376_114202721	3300014969	Miscanthus Rhizosphere	RAASALVDDLDAPERRAQLVSGLEALVPEVDGLRGASESLALLLTDHDLAWQAYATSLLAEALADD*
Ga0173483_100231034	3300015077	Soil	VADDLDAPERRAQLREGLESLREEVAGLRGARESLGLLLADDTLAWQTFATSLLAESLADE*
Ga0132257_1006835692	3300015373	Arabidopsis Rhizosphere	LDPFGRATTALADDLDAPERRTQLRAGLESLRDELAGLRGARESLGLLLSDDDLAWQSFATSLLAEALADE*
Ga0132255_1035607952	3300015374	Arabidopsis Rhizosphere	GDPHRPLEPFGRAATALAEDLDSPTARAQLAEGLEALGPEVAGLRGAGEALRLLRADAELAWRCYAAALLAEELGDEDSTS*
Ga0136617_109073013	3300017789	Polar Desert Sand	DLDLPEHRAALRAGLVSLRGEVAGVRGPRESLALLLSDEELAWNAYATALLAEALAEHI
Ga0190274_124180341	3300018476	Soil	PHRPLDPFGRAATALADDLDAPERRATLMAGLAALRDDVAGLRGARESLALLLADPDLAWNVYGTTVLADALAEE
Ga0190271_135446401	3300018481	Soil	PHRDLDPFGRAATSLADDLDSPERRTMLRRGLAGLRDDVAGLRGAREALALLLSDGDLAWRVYATSLLAEALAEE
Ga0173479_100323271	3300019362	Soil	TALADDLDTEERRLRLRAGLESLSGDVAGLRGAREALGLLLSDADLAWRAYATSLLAEALAEE
Ga0247786_10294541	3300022883	Soil	PRRRLDPFGRAATALADDLDTAERRAQLLSGLEALLPEVEGLRAAREALVLLLTDHDLAWKAYATSLLAEALAEE
Ga0247745_10065103	3300022898	Soil	RAATALAHDLDTEERRLRLRAGLESLSGDVAGLRGAREALGLLLSDADLAWRAYATSLLAEALAEE
Ga0247788_10030351	3300022901	Soil	RAATALADDLDASDRRRALLSGLEALQPEVEGLRGAGESLALLLTDHDLAWKAYATSLLAEALAEE
Ga0247791_10407862	3300023062	Soil	PERRTQLLSGLEALVPEVKGLRGAREALALLLADHDLAWQAYATSLLAEALADD
Ga0247802_10411321	3300023077	Soil	AAAALADDLDTEERRLRLRAGLESLSGDVAGLRGAREALGLLLSDADLAWRAYATSLLAEALAEE
Ga0247794_101702582	3300024055	Soil	FGRATTALADDLDSPERRAQLRSGLESLREEAAGLRGAREALRLLLSDEDLAWQTFATSILAEALAEE
Ga0247794_103182321	3300024055	Soil	RAATALADDLDAPERRMQLLSGLEALVTAVEGLRGARESLALLLTDHDLAWKAYATSLLAEALADE
Ga0207656_104007711	3300025321	Corn Rhizosphere	NPFGRAATALADDLDAPERPARLLSGLEALVPEVEGLRGAREALALLLADHELAWQAYATSLLAEALADD
Ga0210087_10200931	3300025559	Natural And Restored Wetlands	LADDLDAPARRATLRRGLEALRDEVAGLRGAREALALLLGDDDLAWKVYATSLLAEALAE
Ga0207642_109949102	3300025899	Miscanthus Rhizosphere	DPRRRLDPFGRAATSLADDLDAPERRRQLLSGLEALVPEVKGLRGAREALALLLADHDLAWQAYATSLLAEALADD
Ga0207710_106798332	3300025900	Switchgrass Rhizosphere	LADDLDAPERRAQLLSGLEALVPEVEGLRGAREALALLLADHELAWQAYATSLLAEALAD
Ga0207645_110552001	3300025907	Miscanthus Rhizosphere	RTQLQAGLGALVDEVAGLRGARESLELLRADPDLAWTAYATSLLAEALAED
Ga0207705_115210971	3300025909	Corn Rhizosphere	ATALADDLDAPERRAQLRVGLESLGKDVAGLRGARESLALLLSDDDLAWQSYATALLAEALAEA
Ga0207707_106221861	3300025912	Corn Rhizosphere	EGLESLREEVAGLRGARESLGLLLADDTLAWQTFATSLLAEALANDYI
Ga0207662_104356222	3300025918	Switchgrass Rhizosphere	GDPHRPLDPFGRAATALAADIDAPERRMQLRAGLASLRDEVAGLRGARESLGLLLSDDDLAWQSFATSLLAEALADE
Ga0207694_106863743	3300025924	Corn Rhizosphere	QLLSGLEALLPEVEGLSGAREALVLLLTDHDLAWKAYATSLLAEALAEE
Ga0207650_111471512	3300025925	Switchgrass Rhizosphere	RTGLESLREEAAGLRGAREALQLLLSDGDLAWQTFATSILAEALAEE
Ga0207690_102804672	3300025932	Corn Rhizosphere	PERRTQLQAGLGALVDEVAGLRGARESLALLRADPELAWTAYATSLLAEALAED
Ga0207690_104989582	3300025932	Corn Rhizosphere	TAERRLRLRAGLESLSGDVAGLRGAREALGLLLSDADLAWRAYATSLLAEALAEE
Ga0207686_101920461	3300025934	Miscanthus Rhizosphere	LDTAERRAQLLSGLEALLPEVEGLRGAREALVLLLTDHDLAWKAYATSLLAEALAEE
Ga0207709_113904952	3300025935	Miscanthus Rhizosphere	LRAGLESLRDEVEGLRGARESLGLLLSDDDLAWQSFATSLLAEALADEL
Ga0207670_119151152	3300025936	Switchgrass Rhizosphere	APERRAQLLSGLEALVPEVEGLRGAREALALLLADHELAWQAYATSLLAEALADD
Ga0207704_104393952	3300025938	Miscanthus Rhizosphere	ERRAQLREGLESLREEVAGLRGARESLGLLLADDTLAWQTFATSLLAEALANDYI
Ga0207668_105477112	3300025972	Switchgrass Rhizosphere	LEFGGLEGLRDEVAGLRGAREALALLLSDADLAWQVYATSLLAEELAEE
Ga0207640_100561294	3300025981	Corn Rhizosphere	AARRAQLLSGLEALLPEVEGLRGAREALVLLLTDHDLAWKAYATSLLAEALAEE
Ga0207658_118676581	3300025986	Switchgrass Rhizosphere	GRAASALADDLDTPERRTQLQVGLGALVDEVAGLRGARESLALLRADPDLAWTAYATSLLAEALAED
Ga0207677_100300386	3300026023	Miscanthus Rhizosphere	TALADDLDAAERRAQLLSGLEALLPEVEGLRAAREALVLLLTDHDLAWKAYATSLLAEALAEE
Ga0207703_102169991	3300026035	Switchgrass Rhizosphere	ALADDLDAPERRAQLLSGLEALVPEVEGLRGAREALALLLADHELAWQAYATSLLAEALADD
Ga0207703_122411272	3300026035	Switchgrass Rhizosphere	DPFGRAASALADDLDTPERRTQLQVGLGALVNEVAGLRGARESLALLRADPDLAWTAYATSLLAEALAED
Ga0207639_114861871	3300026041	Corn Rhizosphere	AGLGALVDEVAGLRGARESLELLRADPDLAWTAYATSLLAEALAED
Ga0207708_109058942	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	PHRALDPFGRAATALANDLDSAERRETLRHGLEALRDEVAGLRGAREALALLLSDADLAWQVYATSLLAEELAEE
Ga0207641_118044531	3300026088	Switchgrass Rhizosphere	PERRGQLLSGLEALVPEVEGLRGAREALALLLADHELAWQAYATSLLAEALADD
Ga0207675_1010915731	3300026118	Switchgrass Rhizosphere	RRRLDPFGRAASALADDLDTPERRTQLQVGLGALVDEVAGLRGARESLELLRADPDLAWTAYATSLLAEALAED
Ga0247818_104216051	3300028589	Soil	RATLMAGLAALRDDVAGLRGARESLALLLADPDLTWTVYATAVLAEALAEE
Ga0247822_110378802	3300028592	Soil	AEALADDLDAPERRAQLLSGLEALVPEVEGLRGAREALALLLADHELAWQAYATSLLAEALADD
Ga0247824_106114932	3300028809	Soil	LADDLDAPERRAALVAGLAALRDDVAGLRGARESLALLLADPDLAWKVYGTAVLADALAE
Ga0307405_109016881	3300031731	Rhizosphere	PERRTQLVSGLETLVTEVDGLRGAREALALLLTDHDLAWKAYATSLLAEALAEE
Ga0310907_103197502	3300031847	Soil	GGDPHRPLDPFGRAATAVADDLDAPERRAQLREGLESLREEVAGLRGARESLGLLLADDTLAWQTFATSLLAESLADE
Ga0310907_106928182	3300031847	Soil	SPERRETLSRGLEGLRDDVAGLRGAREALALLLSDADLAWQVYATSLLAEELAEE
Ga0310907_107967021	3300031847	Soil	RRGLEGLRDVVAGLRGARESLALLLSDGDLAWRVYATSLLAEALAEE
Ga0310889_107912801	3300032179	Soil	LRHGLEALRDEVAGLRGAREALALLLSDADLAWQVYATSLLAEELAEE
Ga0247829_105197502	3300033550	Soil	PERRAELRVGLESLRKDVAGLRGARESLALLLSDDDLAWQSYATALLAEALAEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081552

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences