Metagenome / Metatranscriptome Family F081554

Basic Information
Family ID	F081554
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	88 residues
Representative Sequence	MVRLRTSFATYVTVCVVLLHLVLLPALYFGMGYVIRKSHEDLFVEHARTFSRVLAEEFEVGVALDSPARTEDLLDLAIIHGEARYAEL
Number of Associated Samples	91
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	65.49 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	88.60 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Unclassified (68.421 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.421 % of family members)
Environment Ontology (ENVO)	Unclassified (23.684 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.263 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.66% β-sheet: 0.00% Coil/Unstructured: 35.34%
Feature Viewer

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Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00072	Response_reg	12.28
PF00196	GerE	4.39
PF00702	Hydrolase	2.63
PF13386	DsbD_2	1.75
PF07730	HisKA_3	0.88
PF00034	Cytochrom_C	0.88
PF02630	SCO1-SenC	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.88
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.88
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.88
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
All Organisms	root	All Organisms	31.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
cellular organisms	root	All Organisms → cellular organisms	31.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	19.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	18.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	18.42 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10211880	Not Available	1272	Open in IMG/M
3300001593\|JGI12635J15846_10526146	Not Available	695	Open in IMG/M
3300001661\|JGI12053J15887_10181802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1081	Open in IMG/M
3300002245\|JGIcombinedJ26739_100237651	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300002245\|JGIcombinedJ26739_100885403	Not Available	775	Open in IMG/M
3300002245\|JGIcombinedJ26739_100911310	Not Available	761	Open in IMG/M
3300002245\|JGIcombinedJ26739_101100903	Not Available	681	Open in IMG/M
3300004152\|Ga0062386_101298464	Not Available	605	Open in IMG/M
3300005591\|Ga0070761_10772641	Not Available	604	Open in IMG/M
3300005602\|Ga0070762_10782576	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300005921\|Ga0070766_10524823	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300005921\|Ga0070766_11004724	Not Available	574	Open in IMG/M
3300006057\|Ga0075026_101065112	Not Available	506	Open in IMG/M
3300006162\|Ga0075030_101540116	Not Available	520	Open in IMG/M
3300006176\|Ga0070765_102068651	Not Available	532	Open in IMG/M
3300009088\|Ga0099830_10675462	Not Available	850	Open in IMG/M
3300009093\|Ga0105240_10059265	All Organisms → cellular organisms → Bacteria → Proteobacteria	4779	Open in IMG/M
3300009143\|Ga0099792_10725890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	645	Open in IMG/M
3300009633\|Ga0116129_1141611	Not Available	686	Open in IMG/M
3300009665\|Ga0116135_1495032	Not Available	506	Open in IMG/M
3300010371\|Ga0134125_10579329	Not Available	1241	Open in IMG/M
3300011271\|Ga0137393_10454509	Not Available	1098	Open in IMG/M
3300012202\|Ga0137363_10151709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1821	Open in IMG/M
3300012202\|Ga0137363_10171565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1720	Open in IMG/M
3300012361\|Ga0137360_10345285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1245	Open in IMG/M
3300012683\|Ga0137398_10239986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1205	Open in IMG/M
3300012924\|Ga0137413_10166543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1454	Open in IMG/M
3300012925\|Ga0137419_10529578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	939	Open in IMG/M
3300012925\|Ga0137419_10559817	Not Available	914	Open in IMG/M
3300012927\|Ga0137416_10397978	Not Available	1166	Open in IMG/M
3300012927\|Ga0137416_11370856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	640	Open in IMG/M
3300012930\|Ga0137407_10219426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1713	Open in IMG/M
3300012930\|Ga0137407_12189526	Not Available	528	Open in IMG/M
3300014169\|Ga0181531_11083646	Not Available	504	Open in IMG/M
3300014495\|Ga0182015_10869416	Not Available	565	Open in IMG/M
3300014499\|Ga0182012_10465818	Not Available	825	Open in IMG/M
3300015054\|Ga0137420_1210316	Not Available	842	Open in IMG/M
3300015197\|Ga0167638_1023922	Not Available	1418	Open in IMG/M
3300015203\|Ga0167650_1026302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1566	Open in IMG/M
3300015242\|Ga0137412_10008264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	8332	Open in IMG/M
3300019880\|Ga0193712_1137907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	507	Open in IMG/M
3300019887\|Ga0193729_1235393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	594	Open in IMG/M
3300020060\|Ga0193717_1035848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1881	Open in IMG/M
3300020579\|Ga0210407_10242802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1403	Open in IMG/M
3300020581\|Ga0210399_10118545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2174	Open in IMG/M
3300020582\|Ga0210395_10072604	All Organisms → cellular organisms → Bacteria → Proteobacteria	2532	Open in IMG/M
3300020582\|Ga0210395_10819173	Not Available	694	Open in IMG/M
3300021170\|Ga0210400_11060919	Not Available	657	Open in IMG/M
3300021180\|Ga0210396_10062694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3391	Open in IMG/M
3300021180\|Ga0210396_11672769	Not Available	518	Open in IMG/M
3300021401\|Ga0210393_10462100	Not Available	1036	Open in IMG/M
3300021403\|Ga0210397_10868679	Not Available	698	Open in IMG/M
3300021405\|Ga0210387_10940892	Not Available	759	Open in IMG/M
3300021405\|Ga0210387_11566466	Not Available	562	Open in IMG/M
3300021406\|Ga0210386_11071573	Not Available	685	Open in IMG/M
3300021420\|Ga0210394_11779364	Not Available	514	Open in IMG/M
3300021433\|Ga0210391_11455304	Not Available	526	Open in IMG/M
3300021474\|Ga0210390_10841079	Not Available	758	Open in IMG/M
3300021475\|Ga0210392_11223196	Not Available	562	Open in IMG/M
3300021477\|Ga0210398_10045602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3616	Open in IMG/M
3300021477\|Ga0210398_11234795	Not Available	589	Open in IMG/M
3300021479\|Ga0210410_10758194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	854	Open in IMG/M
3300021559\|Ga0210409_11011485	Not Available	705	Open in IMG/M
3300021976\|Ga0193742_1104567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	978	Open in IMG/M
3300022557\|Ga0212123_10689401	Not Available	631	Open in IMG/M
3300022873\|Ga0224550_1058125	Not Available	555	Open in IMG/M
3300024330\|Ga0137417_1290445	Not Available	757	Open in IMG/M
3300026215\|Ga0209849_1099923	Not Available	512	Open in IMG/M
3300026551\|Ga0209648_10784465	Not Available	520	Open in IMG/M
3300027535\|Ga0209734_1085015	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300027565\|Ga0209219_1112916	Not Available	666	Open in IMG/M
3300027648\|Ga0209420_1200862	Not Available	529	Open in IMG/M
3300027652\|Ga0209007_1124419	Not Available	645	Open in IMG/M
3300027652\|Ga0209007_1137206	Not Available	610	Open in IMG/M
3300027660\|Ga0209736_1173997	Not Available	566	Open in IMG/M
3300027692\|Ga0209530_1062754	Not Available	1078	Open in IMG/M
3300027895\|Ga0209624_11116591	Not Available	507	Open in IMG/M
3300028013\|Ga0265350_107095	Not Available	562	Open in IMG/M
3300028536\|Ga0137415_10347317	Not Available	1287	Open in IMG/M
3300028536\|Ga0137415_10380070	Not Available	1216	Open in IMG/M
3300028536\|Ga0137415_11176438	Not Available	581	Open in IMG/M
3300028673\|Ga0257175_1081271	Not Available	622	Open in IMG/M
3300028746\|Ga0302233_10273185	Not Available	640	Open in IMG/M
3300028773\|Ga0302234_10022137	All Organisms → cellular organisms → Bacteria	3025	Open in IMG/M
3300029907\|Ga0311329_10929956	Not Available	544	Open in IMG/M
3300029910\|Ga0311369_10559301	Not Available	962	Open in IMG/M
3300029910\|Ga0311369_10670251	Not Available	855	Open in IMG/M
3300029945\|Ga0311330_11062289	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300029990\|Ga0311336_11435750	Not Available	606	Open in IMG/M
3300029999\|Ga0311339_10013392	All Organisms → cellular organisms → Bacteria → Proteobacteria	12697	Open in IMG/M
3300030056\|Ga0302181_10055381	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300030490\|Ga0302184_10339561	Not Available	595	Open in IMG/M
3300030503\|Ga0311370_10208811	All Organisms → cellular organisms → Bacteria	2618	Open in IMG/M
3300030524\|Ga0311357_10033296	All Organisms → cellular organisms → Bacteria	5345	Open in IMG/M
3300030646\|Ga0302316_10360127	Not Available	586	Open in IMG/M
3300030815\|Ga0265746_1041269	Not Available	620	Open in IMG/M
3300031057\|Ga0170834_103087805	Not Available	732	Open in IMG/M
3300031057\|Ga0170834_108270661	Not Available	561	Open in IMG/M
3300031122\|Ga0170822_14842234	Not Available	513	Open in IMG/M
3300031128\|Ga0170823_14737834	Not Available	764	Open in IMG/M
3300031233\|Ga0302307_10452395	Not Available	652	Open in IMG/M
3300031236\|Ga0302324_100679740	Not Available	1457	Open in IMG/M
3300031708\|Ga0310686_101713165	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300031708\|Ga0310686_102755663	Not Available	1156	Open in IMG/M
3300031708\|Ga0310686_107636596	Not Available	909	Open in IMG/M
3300031708\|Ga0310686_113492225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2058	Open in IMG/M
3300031708\|Ga0310686_118106188	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300031708\|Ga0310686_118200058	Not Available	757	Open in IMG/M
3300031715\|Ga0307476_10459369	Not Available	943	Open in IMG/M
3300031753\|Ga0307477_10792393	Not Available	630	Open in IMG/M
3300031837\|Ga0302315_10526927	Not Available	639	Open in IMG/M
3300033180\|Ga0307510_10495408	Not Available	664	Open in IMG/M
3300034199\|Ga0370514_057134	Not Available	983	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.25%
Host-Associated	Host-Associated	1.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.11%
Aquatic	Environmental → Aquatic	6.14%
Plants	Host-Associated → Plants	1.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.32%
Peat	Environmental → Terrestrial → Peat	15.79%
Freshwater	Environmental → Aquatic → Freshwater	3.51%
Sediment	Environmental → Aquatic → Sediment	1.75%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.88%
Roots	Host-Associated → Plants → Roots	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.26%
Loam	Environmental → Terrestrial → Soil → Loam	17.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.75%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.16%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.53%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.51%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.88%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.88%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.88%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.88%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.88%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021976	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c1	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028013	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE2	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_102118801	3300001593	Forest Soil	MARLRATFWIYVTACVVLVHLVLLPALYFGMGYVIRESHEDLFVEHARTFSRVLADEFEVGVALDSPARIEDLLDFAITHGGARYAELYERGRSI
JGI12635J15846_105261461	3300001593	Forest Soil	MARLSATFTKFVTASVVAVHLVLLPALYFGVGYIIRKSHEDLFIQHARTFARVIAEEFEVGGALDSPTTTSDLLDLAIIHGEGVF
JGI12053J15887_101818021	3300001661	Forest Soil	MVRLRTSFANYVTAWVVVLHLVLLPALFFGMGYVIRKSHEDLFIEHTRTFARVLAEEFEIGAALDSPARTEDLLDLAVIHGEARYAEFFDSGVS
JGIcombinedJ26739_1002376511	3300002245	Forest Soil	MVRLRASFANYVTVWVVLLHLVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEAGVALDSQERTEDLLDLAISHGEARYA
JGIcombinedJ26739_1008854032	3300002245	Forest Soil	MVRLRPSFASYVTLCVVAVHIVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEVGVALDSRQRTEDLLDLAILHGEARY
JGIcombinedJ26739_1009113102	3300002245	Forest Soil	MARLTSTFANLVTGCVLAVHLILLPALYFGVGYVIRTSHEEMFVQHARTFARVLADEFEVGVALDSAARTEDLLDLAIIHGESRYAELVDHNRSIR
JGIcombinedJ26739_1011009031	3300002245	Forest Soil	MVRLRASFANYVTVWVVLLHLVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEAGVALDSQERTEDLLDLAISHG
Ga0062386_1012984641	3300004152	Bog Forest Soil	MARLRTSFANFVAACVVALHLILLPVLYFGLGYVIRKSHEDLFIEHARTFARVLADEFELGVALESDSRTEDLLDLAIIHGDGRYAELIDNG
Ga0070761_107726411	3300005591	Soil	MARIRATFWVYVTACVVVAHLVLLPALFFGMGYVIRESHEDLFIEHARTFSRVLADEFEVGKAMDSQKRIEDLLDFAI
Ga0070762_107825761	3300005602	Soil	MARLRSKFANLVTGCVIAVHLILLPALYFGVGYVIRKSHEDLFIQHARTFARILADEFEVGAALDSAARTEDLLDL
Ga0070766_105248231	3300005921	Soil	MARLRATFWIYITACVVVVHLVLLPALYFGLGYVIRESHEDLFIDHARTFSRVLADEFEVGLALDSQTRIEDLLDFAITHGGARYAELF
Ga0070766_110047241	3300005921	Soil	MARLRATFWIYVTAWVVMVHLVLLPALYFGMGYVIRESHEDLFIEHARTFSRVLADEFEVGAAMDSQKRIEDLLDFAITHG
Ga0075026_1010651122	3300006057	Watersheds	MARLRASFANFVTIWVVALHLVLLPALYFGVGYVIRKSHEDLFVQHARTFARVLADQFEVGEALGSAQRTEDLLDLAITHG
Ga0075030_1015401161	3300006162	Watersheds	MARLSASFTKYVTLWVVAVHIVLLPALYFGVGFIIRKSHEDLFVEHARTFARILADEFEVGAAFDSEAKASDLLDLAIIHGEAVYAELLKG
Ga0070765_1020686512	3300006176	Soil	MVRLRPSFASYVTLCVVAVHIVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEVGVALDSRQRTEDLLDLAILHGE
Ga0099830_106754621	3300009088	Vadose Zone Soil	VVLLHLVLLPALFFGMGYVIRKSHEDLFVEHARTFSRVLAEEFEVGVALDSPARTGDLLDLAIIHGEALY
Ga0105240_100592657	3300009093	Corn Rhizosphere	MVRLRTSFASYVTLCVVAVHIVLLPALYFGLGFVIRKSHEDLFVEHARTFARVIAEEFEAGVALDSRQRTEDLLDLAVVHGEALYAELFDRGVGTRSRL
Ga0099792_107258901	3300009143	Vadose Zone Soil	MVRLRTSFASYVTLCVVAVHIVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEVGVALDSHQRTEDLLDLAILHGEARYAELFDQGVGTRSRLG
Ga0116129_11416111	3300009633	Peatland	MARLRATFWIYVTACVVVVHLVLLPALYFGMGYVIRESHEDLFVEHARTFSRVLADEFEVGAAMDSQKRIEDLLDFAITHGGARYAELYD
Ga0116135_14950321	3300009665	Peatland	LAQLRATFWIYITAWVVVVHLVLLPALYFGMGYVIRESHEDLFIDHARTFSRVLADEFEVGVALDSQTRTED
Ga0134125_105793293	3300010371	Terrestrial Soil	MVRLRTSFANYVTLCVVAVHIFLLPALYFGMGYVIRTSHEDLFVEHARTFARVLAEEFEVSVALDSRQRTEDLLDLAVVHGEALYAELFDRGVGTRS
Ga0137393_104545093	3300011271	Vadose Zone Soil	MARLNATFTNFVTVCVVAIHLVLLPALYFGVGYVIRKSHEDLFVQHARTFARVLADEFEVGAAFDSPAKTSDLLDLAIIHGEALYAELMNGDRSARSSLGSPDVKAPRRN
Ga0137363_101517093	3300012202	Vadose Zone Soil	VTLCVVAVHIVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEVGIALDSRQRTEDLLDLAVLHGEARYAELFD
Ga0137363_101715651	3300012202	Vadose Zone Soil	MARLNATFTNFVTVCVVAIHLVLLPALYFGVGYVIRKSHEDLFVQHARTFARVLADEFEVGAAFDSPAKTSDLLDLAIIHGEA
Ga0137360_103452854	3300012361	Vadose Zone Soil	MARLNATFTNFVTVCVVAIHLVLLPALYFGVGYVIRKSHEDLFVQHARTFARVLADEFEVGAAFDSPAKTSDL
Ga0137398_102399861	3300012683	Vadose Zone Soil	MARLNATFTNFVTVCVVAIHLVLLPALYFGVGYVIRKSHEDLFVHHARTFARVLADEFEVGAAFDSPTKTSDLLDLAIIHGEALYAEL
Ga0137413_101665433	3300012924	Vadose Zone Soil	MARLNATFTNFVTVCVIAIHLVLLPALYFGVGYVIRKSHEDLFVQHARTFARVLADEFEVGAAFDSPAKTSDLLDLAIIHGE
Ga0137419_105295783	3300012925	Vadose Zone Soil	VTLCVVAVHIVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEVGIALDSRQRTEDLLDLAVLHGEARYAELFDRGVGTRSRLG
Ga0137419_105598173	3300012925	Vadose Zone Soil	MVHLVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLADEFEVGVALDSRARTEDLLDV
Ga0137416_103979781	3300012927	Vadose Zone Soil	MARLRTSFANVVAACVVALHLILLPALYYGLGYVVRKSHEDLFIEHARTFARVLADEFELGVALESESRTEDLLDLAILHGDGRYA
Ga0137416_113708562	3300012927	Vadose Zone Soil	MARLNATFTNFVTVCVVAIHLVLLPALYFGVGYVIRKSHEDLFVHHARTFARVLADEFEVGAALESPPKTSDLLDLAIIHGEALYAELMNG
Ga0137407_102194263	3300012930	Vadose Zone Soil	VTLCVVAVHIVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEVGIALDSRQRTEDLLDLAVLHGEARYAELFDRGVGTRSRLGSP
Ga0137407_121895262	3300012930	Vadose Zone Soil	MARLNATFTNFVTVCVVAIHLVLLPALYFGVGYVIRKSHEDLFVQHARTFARVLADEFEVGAAFDSPAKTSDLLDLAIIHGEALYAELV
Ga0181531_110836461	3300014169	Bog	VVVVHLVLLPALYFALGYVIRESHEDLFVEHARTFSRVLADEFEVGVALDSHARIEDLLDFAITHGGAGYAELYDRGLSTRSLYGLPE
Ga0182015_108694162	3300014495	Palsa	MAQLRATFWIYITAWVVVVHLVLLPALYFGMGYVIRESHEDLFIEHARTFSRVLADEFEVGVALDSQTRTEDLLDFAITHGGARYAELYE
Ga0182012_104658181	3300014499	Bog	MVRLRSSFATYVTACVVVLHLILLPAIFFGMAYVVRKSHENLFIEHARTFARVLAEEFEVGAALDSTIRTSDLLDLAVLHGEARYAEIWDGDHGIRSAL
Ga0137420_12103163	3300015054	Vadose Zone Soil	MSATFTKFVTASVVAVHLVLLPALYFGVGYIIRKSHEDLFIQHARTFARVIAEEFEVGGALDSTATTSDLLDLAIIHGEGVFA
Ga0167638_10239221	3300015197	Glacier Forefield Soil	MVHLVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLADEFEVGVALDSQARTEDLLDLAIIHGESRYAELYDQGRSILS
Ga0167650_10263023	3300015203	Glacier Forefield Soil	MVRLRTSFASYVTLCVVAVHIVLLPALFFGMGFVIRKSHEDLFVEHTRTFARVLAEEFEAGVALESRQRTEDLLDLAVLHGEARY
Ga0137412_100082641	3300015242	Vadose Zone Soil	VHIVLLPALFFGMGYVIRKSHENLFFEHVRTFARVLAEEFEAGVALDSRQRTEDLLDLAVLHGEALYAEIYDRGASTR
Ga0193712_11379072	3300019880	Soil	MARLNASFARLVTLSVVAVHLVLLPALYFGVGYVIRKSHQDLFVQHARTFARVLADEFEVGAALDSQAKTSDLLDLSIIHGEALYAELINGDRSIR
Ga0193729_12353932	3300019887	Soil	MVRLRTSFANYVTLCVVAVHVVLLPALFFGMGYVIRQSHENLFVEHARTFARVLAEEFEVGVALESRQRTEDLLDLAVLHGEALYAELFDRGASTRSRLGSADIA
Ga0193717_10358481	3300020060	Soil	MVRLRTSFANYVTAWVVVLHLVLLPALFFGMGYVIRKSHEDLFIEHTRTFARVLAEEFEIGAALDSPTRIEDLLDLAVIHGEARYAEFFDGGVS
Ga0210407_102428023	3300020579	Soil	MARLNATFSRFVTASVVAVHLMLLPALYFGVGYVIRKSHEDLFVQHARTFARVLADEFEVGAALDSAAQTSDLLDLAIIHGESRYAELT
Ga0210399_101185454	3300020581	Soil	MARLRSKFANLVTGCVIAVHLILLPALYFGVGYVIRKSHEDLFIQHARTFARILADEFEVGAALDSAARTEDLLDLAIIHGES
Ga0210395_100726041	3300020582	Soil	MARLRATFWIYVTAYVVVVHLVLLPALYFGMGYVVRESHEDLFIEHARTFSRVLADEFEVGVALDSQTRIEDLLDFAI
Ga0210395_108191731	3300020582	Soil	MARLRATFWIYVTAWVVVVHLVLLPALYFGMGYVIRESHEDLFIEHARTFTRVLADEFEVGVALDSQKRIEDLLDFAITH
Ga0210400_110609192	3300021170	Soil	MVRLRASFATYVTVCVVLLHLVLLPALFFGMGYVIRKSHEDLFVEHVRTFSRVLAEEFEVGVGLDSPERTEDLLDLAIIHGEARYAELFDQGRGVRSKLSSP
Ga0210396_100626941	3300021180	Soil	MARLRSRFANLVTGCVVAVHLILLPALYFGVGYVIRKSHEDLFVQHARTFARILADEFEVGAALDSAARTEDLLDLAIIHGESRYAELVERDRRIHRQLG
Ga0210396_116727692	3300021180	Soil	MVRLRTSFANYVTVWVVLLHFVLLPALFFAMGYVIRKSHEDLFVEHARTFARVLAEEFEAGVALDSQERAEDLLDLAISHGEARYAE
Ga0210393_104621003	3300021401	Soil	MARLNASFAKVVTASVVALHLLLLPALYFGVGFVIRKSHEDLFVQHARTFARVLADEFEVGAALDSAAQTS
Ga0210397_108686791	3300021403	Soil	MARLSASFAKFVTLWVVGVHLVLLPALYFGVGYVIRKSHEDLFVQHARTFARVLADEFEVGAALDSPAKTSDLLDLAIIHGEALHAELVN
Ga0210387_109408921	3300021405	Soil	LRKSFANVVAAFVVALHLILLPALYYGLGYVVRKSHENLFIEHARTFARVLADEFELGVALESESRTEDLLDLAIVHG
Ga0210387_115664662	3300021405	Soil	MVRLRTSFANYVTVWVVLLHFVLLPALFFAMGYVIRKSHEDLFVEHARTFARVLAEEFEAGVALDSPERTEDLLDLAISHGEARYAELFDRGRSIRSQLGSTGIV
Ga0210386_110715731	3300021406	Soil	MARLRSKFANLVTGCVIAVHLILLPALYFGVGYVIRKSHEDLFIQHARTFARILADEFEVGAALDSAARTEDLLDLAIIHGESRYAEL
Ga0210394_117793641	3300021420	Soil	MARLRASFANLVVASVVALHLLLLPALYYGLGYVIRKSHEELFIEHARTFARVLADEFELGVALESESRTEDLLDLAIIHGDGRYAELIDGG
Ga0210391_114553042	3300021433	Soil	MARLRATFWIYVTACVVLVHLVLLPALYFGMGYVIGESHEDLFVEHARTFSRVLADEFEVGVALDSPTRIEDLLDFAITHGGARY
Ga0210390_108410791	3300021474	Soil	MARLRSRFANLVTGCVVAVHLILLPALYFGVGYVIRKSHEDLFVQHARTFARILADEFEVGAALDSAARTEDLLDLAIIHGESRYAELVEPDRRTRSQLGPSDIT
Ga0210392_112231961	3300021475	Soil	MARLRSKFANLVTGCVIAVHLILLPALYFGVGYVIRKSHEDLFVQHARTFARILADEFEVGAALDSAARTEDLLDLAIIHGESRY
Ga0210398_100456026	3300021477	Soil	MARLSASFTKFVTASVVAVHLLLLPALYFGVGHVIRKSHEDLFVQHARTFARVLADEFEVGAALDSEAQTSDLLDLAIIHGESRYAELVDG
Ga0210398_112347951	3300021477	Soil	MARLRATFWIYVTAYVVVVHLVLLPALYFGMGYVVRESHEDLFIEHARTFSRVLADEFEVGVALDSQTRIEDLLD
Ga0210410_107581943	3300021479	Soil	MARLNATFSRFVTASVLAVHLLLLPALYFGVGYVIRTSHEDLFVQHARTFARVLADEFEVGAALDSAAQTSDLLDLAIIHGESRYAELADGSHSIRS
Ga0210409_110114851	3300021559	Soil	MARLRSRFANLVTGCVVAVHLILLPALYFGVGYVIRKSHEDLFVQHARTFARILADEFEVGAALDSAARTEDLLDLAIIHGESRYAELVERDRRIRSQ
Ga0193742_11045673	3300021976	Soil	MVRLRTSFANYVTAWVVVLHLVLLPALFFGMGYVIRKSHEDLFIEHTRTFARVLAEEFEIGAALDSPTRIEDLLDLAVIHGEAR
Ga0212123_106894011	3300022557	Iron-Sulfur Acid Spring	MVRLRTSFATYVTACVVLLHLVLLPALFFGMGYVIRKSHEDLFVEHARTFSRVLAEEFEVGVALDSPARTEDLLDLAIIHGEARYAELFDQGR
Ga0224550_10581252	3300022873	Soil	MARLRATFWIYVTACVVVVHLVLLPALFFGLGYVIRKSHEDVFVEHATTFSRVLADEFEVGAALDSQKRIEDLLDFAITHG
Ga0137417_12904451	3300024330	Vadose Zone Soil	MARLSATFTTFVTASVVAVHLVLLPALYFGVGYIIRKSHEDLFIHHARTFARVIDEEFEVGAALDSIATTSDLLDLAIIHGEGVYAELADGDHSV
Ga0209849_10999231	3300026215	Soil	MVRLRTSFANYVTVCVVLVHLVLLPALYFGMGYVIRKSHEDLFVEHVRTFARVLAEEFEVGVALDSPARTEDLLDLAIIHGEARYAEV
Ga0209648_107844651	3300026551	Grasslands Soil	MVRLRTSFATYVTVCVVLVHLVLLPALFFGMGYVIRKSHEDLFVEHARTFSRVLAEEFEVGVALDSPARTEDLLDLAIIHGEARYAELFDQG
Ga0209734_10850152	3300027535	Forest Soil	MARLNATFTNFVTVCVIAIHLVLLPALYFGVGYVIRKSHEDLFVQHARTFARVVADEFEVGAAFDSPAKTSDLLDLAIIHGEALYAELMNGDRSIRSTLGSP
Ga0209219_11129162	3300027565	Forest Soil	MARLSASFARFVTLWVVGVHLVLLPALYFGVGYVIRKSHEDLFVQHARTFARVLADEFEVGAALDSPAKTSDLLDLAIIHGEALYAE
Ga0209420_12008622	3300027648	Forest Soil	MARLRATFWIYVTACVVLVHLVLLPALYFGMGYVIRESHEDLFVEHARTFSRVLADEFEVGVALDSQTRIEDLLDFAITHGGARYAELYERGR
Ga0209007_11244191	3300027652	Forest Soil	MARLRATFWIYVTACVVLVHLVLLPALYFGMGYVIRESHEDLFVEHARTFSRVLADEFEVGVALDSPTRIEDLLDF
Ga0209007_11372061	3300027652	Forest Soil	MARIRATFWIYVTACVVLVHVVLLPALFFGLGYVIRESHEDLFIDHARTFSRVLADEFEVGGALDSQTRIEDLLDFAINSADDAEILPRFLEASLP
Ga0209736_11739972	3300027660	Forest Soil	MVRLRTSFATYVTVCVVLLHLVLLPALYFGMGYVIRKSHEDLFVEHARTFSRVLAEEFEVGVALDSPARTEDLLDLAIIHGEARYAEL
Ga0209530_10627542	3300027692	Forest Soil	MAQLRATFWIYITAWVVVVHLVLLPALYFGMGYVIRESHEDLFIEHARTFSRVLADEFEVGVALDSQARTEDLLDFAITHGGARYAELYERGRSIRSLYGS
Ga0209624_111165911	3300027895	Forest Soil	MCLMARLRATFWIYVTAWVVVVHLVLLPALYFGMGYVIRESHEDLFVEHARTFSRVLADEFEVGAAMDSQKRIEDLLDFAITHG
Ga0265350_1070951	3300028013	Soil	MVRLRTSFATYVTVCVVAVHIVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEVSVALESRQRTEDLLDLAVLHGEARYAELFDRGVGTRS
Ga0137415_103473171	3300028536	Vadose Zone Soil	MVRLRTSFATYVTVCVVLVHLVLLPALFFGMGYVIRKSHEDLFVEHARTFSRVLAEEFEVGVALDSPARTEDLLDLAIIHGEARYAELFDEGRSIRSKLG
Ga0137415_103800701	3300028536	Vadose Zone Soil	LRTSFANVVAACVVALHLILLPALYYGLGYVVRKSHEDLFIEHARTFARVLADEFELGVALESESRTEDLLDLAIVHGDGRYAELTDGARS
Ga0137415_111764382	3300028536	Vadose Zone Soil	MARLSASFARFVTLWVVAVHLVLLPALYFGVGYVIRKSHQELFVQHARTFARVLADEFEVGAALDSQAKTSDLLDLAIIHGEALHAEVVIGDHSIRSDL
Ga0257175_10812712	3300028673	Soil	MVRLRTSFATYVTVCVVLVHLVLLPALFFGMGYVIRKSHEDLFVEHARTFSRVLAEEFEVGVALDSPARTEDLLD
Ga0302233_102731852	3300028746	Palsa	MAGLRATLSIYVTACVVVVHLVLLPALFFGLGYVIRKSHEDVFVEHATTFSRVLADEFEVGAALDSQKRIEDLLDFAITHGGAGYAELYDRGHSTRSLYGLP
Ga0302234_100221371	3300028773	Palsa	VYVTACVVVVHLVLLPALYFGLGYVIRESHEDLFIDHARTFSRVLADEFEVGLALDSQTRIEDLLDFAITHGGARYAELVDRGRSI
Ga0311329_109299561	3300029907	Bog	MPRLRATFWIYITAFVVLVHLVLLPALYFGMGYVVRESHEDLFIEHARTFSRVLADEFEVGVALDSQARIEDLLDFAITHGGARYAELYER
Ga0311369_105593012	3300029910	Palsa	MAELRATLSIYVTACVVVVHLVLLPALFFGMGYVIRKSHEDVFVEHTSTFSRVLADEFEVGAALDSQKRIEDLLDFAITHGGAGYAELYDRGHS
Ga0311369_106702511	3300029910	Palsa	MPRLRATFWIYITAFVVLVHLVLLPALYFGMGYVVRESHEDLFIEHARTFSRVLADEFEVGVALDSQARIEDLLDFAITHGGARYAELYERGRSIRSLYG
Ga0311330_110622892	3300029945	Bog	VYVTACVVVVHLVLLPALYFGLGYVIRESHEDLFVDHARTFSRVLADEFEVGLALDSQTRIEDLLDFAITHGGARYAELVDRGRSIRSL
Ga0311336_114357502	3300029990	Fen	MRRLRTPISNLVAGWVVALHLVLLPALYFGLGYIVRTSHEDLFIEHARTFARVIADEFEVGAALESPGRIGDLLDLAMIHGDGSYAELLFQGKSYRSDIGPR
Ga0311339_100133921	3300029999	Palsa	MAELRATLSIYVTACVVVVHLVLLPALFFGMGYVIRKSHEDVFVEHTSTFSRVLADEFEVGAALDSQKRIEDLLDFAITHGGAGYAELYDRGHSTRSLYGLPE
Ga0302181_100553813	3300030056	Palsa	VYVTACVVVVHLVLLPALYFGLGYVIRESHEDLFIDHARTFSRVLADEFEVGLALDSQTRIEDLLDFAITHGGARYAELVDRGRSIR
Ga0302184_103395612	3300030490	Palsa	MARLRATFWIYVTACVVVVHLVLLPALFFGMGYVIRESHEDLFIEHARTFSRVLADEFEVGRALDSQTRIEDLLDFAI
Ga0311370_102088113	3300030503	Palsa	MAQLRATFWIYITAWVVVVHFVLLPALYFGMGYVIRESHEDLFVEHAGTFSRVLADEFEVGVALDSQTRTEDLL
Ga0311357_100332961	3300030524	Palsa	MAGLRATLSIYVTACVVVVHLVLLPALFFGLGYVIRKSHEDVFVEHATTFSRVLADEFEVGAALDSQKRIEDLLDFAITHGGAGYAELYDRGHSTRSLY
Ga0302316_103601271	3300030646	Palsa	MARLRATFWIYVTACVVVVHLVLLPALFFGMGYVIRESHEDLFIEHARTFSRVLADEFEVGVALDSQARIEDLLDFAITH
Ga0265746_10412691	3300030815	Soil	MARLRATFWIYVTVWVVVVHLVLLPALYFGMGYVIRESHEDLFIEHARTFSRVLADEFEVGAAMDSQKRVEDLLDFAITHGGARYAELYDRGRS
Ga0170834_1030878052	3300031057	Forest Soil	LRKSFANVVAAFVVALHLILLPALYYGLGYVVRKSHENLFIEHARIFARVLADEFELGVALESDSRTEDLLDLAIVHGDGRYAEL
Ga0170834_1082706612	3300031057	Forest Soil	MVRPRPSFASYVTLCVVAVHIVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEVGVALDSRQRTEDLLDLAILHGEARYAELFDQGAGTRSRLGTLNKY
Ga0170822_148422342	3300031122	Forest Soil	MVRPRPSFASYVTLCVVAVHIVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEVGVALDSRQRTEDLLDLAILHGEARYAELF
Ga0170823_147378342	3300031128	Forest Soil	MARLRKSFANVVAAFVVALHLILLPALYYGLGYVVRKSHENLFIEHARIFARVLADEFELGVALESDSRTEDLLDLAIVHGDGRYAEL
Ga0302307_104523951	3300031233	Palsa	MVLAAPLQASNPDHARLVPRLRATFWVYITACVVLVHLVLLPALYFALGYVIRESHEDLFIEHARTFSRVLADEFEVGVALDSQTRIEDLLDFAITHGGARYAELYER
Ga0302325_107532413	3300031234	Palsa	MAGLRATLSIYVTACVVVVHLVLLPALFFGLGYVIRKSHEDVFVEHATTFSRVLADEFEVGAALDSQKRIE
Ga0302324_1006797403	3300031236	Palsa	MAGLRATLSIYVTACVVVVHLVLLPALFFGLGYVIRKSHEDVFVEHATTFSRVLADEFEVGAALDSQKRIEDLL
Ga0310686_1017131653	3300031708	Soil	VVVVHLVLLPALYFGMGYVIRESHEDLFVEHARTFSNVLADEFEVGVALDSQKRIEDLLDFAITHGGARYAELYDRGH
Ga0310686_1027556633	3300031708	Soil	MVRLRTSFATYVTVCVVAVHIVLLPALFFGMGYVIRKSHEDLFVEHARTFARVLAEEFEVSVALESRQRTEDLLDLAVLHGEARYAELFDGGVGTRSRLG
Ga0310686_1076365961	3300031708	Soil	MARLRATFWIYVTVWVVVVHLVLLPALYFGMGYVIRESHEDLFIEHARTFSRVLADEFEVGVALDAQKRIEDLLDFAITHGGARYAEL
Ga0310686_1134922253	3300031708	Soil	MVRLRTSFANYVTVWVVLLHFVLLPALFFAMGYVIRKSHEDLFVEHARTFARVLAEEFEAGVALDSPERTE
Ga0310686_1181061881	3300031708	Soil	MARIRATFWVYVTACVVVAHLVLLPALFYGMGYVIRESHEDLFIEHARTFSRVLADEFEVGVALDSQTRIEDLLDFAITHGG
Ga0310686_1182000581	3300031708	Soil	MARLRATFWIYVTACVMLVHLVLLPALFFGMGYVIRESHEDLFVDHARTFSRVLADEFEVGAALDSQTRIEDLLDFAITHGGARY
Ga0307476_104593691	3300031715	Hardwood Forest Soil	MARLRATFWIYVTAYVVVVHLVLLPALYFGMGYVVRESHEDLFIEHARTFSRVLADEFEVGVALDSQTRIEDLLDF
Ga0307477_107923932	3300031753	Hardwood Forest Soil	MARLRSRFANLVTGCVVAVHLILLPALYFGVGYVIRKSHEDLFIQHARTFARILADEFEVGAALDSAARTEDLLDLAI
Ga0302315_105269271	3300031837	Palsa	MARLRATFWIYVTACVVLVHLVLLPALFYGMGYVIRESHEDLFVDHARTFSRVLADEFEVGVALDSQTRTEDLLDFAI
Ga0307510_104954082	3300033180	Ectomycorrhiza	MARLKASFANYVAACVVALHLVLLPALYYGLGYVIRKSHEDLFIEHARTFARVLADEFELGVALDSASRTEDLLDLAIIHG
Ga0370514_057134_3_290	3300034199	Untreated Peat Soil	MARLRLTFWVYIAACVVVVHLVLLPALFFALGYVIRESHEDLFVEHARTFSRVLADEFEVGVALDSQARIEDLLDFAITHGGARYAELYEHGRSIR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081554

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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