Metagenome Family F081556

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081556
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	79 residues
Representative Sequence	MGVPVESVAVGKCYLTEIGQIRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSILRFARDVEREVPCDYDPRYPAAGSPG
Number of Associated Samples	66
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.96 %
% of genes near scaffold ends (potentially truncated)	27.19 %
% of genes from short scaffolds (< 2000 bps)	93.86 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.912 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.105 % of family members)
Environment Ontology (ENVO)	Unclassified (64.035 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.298 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.41% β-sheet: 25.93% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF10108	DNA_pol_B_exo2	2.63
PF06441	EHN	1.75
PF02586	SRAP	1.75
PF12221	HflK_N	1.75
PF14087	DUF4267	1.75
PF01344	Kelch_1	1.75
PF04185	Phosphoesterase	0.88
PF00326	Peptidase_S9	0.88
PF04002	RadC	0.88
PF01425	Amidase	0.88
PF13425	O-antigen_lig	0.88
PF09913	DUF2142	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.75
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.75
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.88
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.88
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.91 %
All Organisms	root	All Organisms	35.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.91 %
cellular organisms	root	All Organisms → cellular organisms	35.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.42 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.75 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.79 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.75 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.02 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.75 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.75 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.91 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.63 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.75 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.75 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.91 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.63 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1.75 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1.75 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.91 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	1.75 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	1.75 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.75 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.91 %
Variovorax sp. PAMC26660	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. PAMC26660	1.75 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1.75 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.75 %
Bradyrhizobium arachidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	0.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100909022	Not Available	762	Open in IMG/M
3300005179\|Ga0066684_10204635	Not Available	1278	Open in IMG/M
3300005332\|Ga0066388_103861791	Not Available	765	Open in IMG/M
3300005332\|Ga0066388_104858440	Not Available	683	Open in IMG/M
3300005332\|Ga0066388_107656170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium arachidis	541	Open in IMG/M
3300005332\|Ga0066388_107727360	Not Available	539	Open in IMG/M
3300005764\|Ga0066903_100857503	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1636	Open in IMG/M
3300005764\|Ga0066903_101670453	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300005764\|Ga0066903_105011797	Not Available	702	Open in IMG/M
3300005952\|Ga0080026_10035565	Not Available	1267	Open in IMG/M
3300005952\|Ga0080026_10171457	Not Available	635	Open in IMG/M
3300005993\|Ga0080027_10180832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	819	Open in IMG/M
3300005994\|Ga0066789_10165161	Not Available	938	Open in IMG/M
3300006050\|Ga0075028_100001732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7991	Open in IMG/M
3300006176\|Ga0070765_102032245	Not Available	537	Open in IMG/M
3300006354\|Ga0075021_10062485	Not Available	2168	Open in IMG/M
3300009012\|Ga0066710_101842927	Not Available	910	Open in IMG/M
3300010048\|Ga0126373_12979865	Not Available	528	Open in IMG/M
3300010335\|Ga0134063_10586341	Not Available	566	Open in IMG/M
3300010360\|Ga0126372_11719742	Not Available	669	Open in IMG/M
3300010360\|Ga0126372_12627298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. PAMC26660	555	Open in IMG/M
3300010361\|Ga0126378_12259671	Not Available	621	Open in IMG/M
3300010366\|Ga0126379_12826695	Not Available	581	Open in IMG/M
3300010366\|Ga0126379_13064631	Not Available	559	Open in IMG/M
3300010376\|Ga0126381_101383789	Not Available	1017	Open in IMG/M
3300010376\|Ga0126381_101666374	Not Available	921	Open in IMG/M
3300010398\|Ga0126383_13669003	Not Available	501	Open in IMG/M
3300011270\|Ga0137391_10139689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2107	Open in IMG/M
3300012198\|Ga0137364_10711059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	758	Open in IMG/M
3300012211\|Ga0137377_10423661	All Organisms → cellular organisms → Bacteria → Proteobacteria	1269	Open in IMG/M
3300012211\|Ga0137377_11081073	Not Available	732	Open in IMG/M
3300012362\|Ga0137361_10017351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5376	Open in IMG/M
3300012582\|Ga0137358_10427826	Not Available	894	Open in IMG/M
3300012971\|Ga0126369_10544838	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1224	Open in IMG/M
3300016270\|Ga0182036_11776850	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300016294\|Ga0182041_10917669	Not Available	788	Open in IMG/M
3300016294\|Ga0182041_11377372	Not Available	647	Open in IMG/M
3300016294\|Ga0182041_11401400	Not Available	641	Open in IMG/M
3300016294\|Ga0182041_12062512	Not Available	532	Open in IMG/M
3300016319\|Ga0182033_12093864	Not Available	516	Open in IMG/M
3300016341\|Ga0182035_10874471	Not Available	792	Open in IMG/M
3300016341\|Ga0182035_11285742	Not Available	655	Open in IMG/M
3300016357\|Ga0182032_10761832	Not Available	816	Open in IMG/M
3300016357\|Ga0182032_10949221	Not Available	733	Open in IMG/M
3300016357\|Ga0182032_11274126	Not Available	634	Open in IMG/M
3300016371\|Ga0182034_10391156	Not Available	1138	Open in IMG/M
3300016387\|Ga0182040_10299787	Not Available	1229	Open in IMG/M
3300016387\|Ga0182040_11289338	Not Available	616	Open in IMG/M
3300016404\|Ga0182037_10754402	Not Available	836	Open in IMG/M
3300016422\|Ga0182039_10727351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	877	Open in IMG/M
3300016422\|Ga0182039_10993900	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300016422\|Ga0182039_12251925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300016445\|Ga0182038_10338196	Not Available	1243	Open in IMG/M
3300016445\|Ga0182038_11088068	Not Available	710	Open in IMG/M
3300016445\|Ga0182038_11285437	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300016445\|Ga0182038_12025403	Not Available	521	Open in IMG/M
3300020199\|Ga0179592_10021653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2865	Open in IMG/M
3300021479\|Ga0210410_10702041	Not Available	893	Open in IMG/M
3300027667\|Ga0209009_1153891	Not Available	585	Open in IMG/M
3300027874\|Ga0209465_10660031	Not Available	515	Open in IMG/M
3300027894\|Ga0209068_10020421	Not Available	3223	Open in IMG/M
3300028047\|Ga0209526_10206760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1357	Open in IMG/M
3300028906\|Ga0308309_11421833	Not Available	594	Open in IMG/M
3300031546\|Ga0318538_10529774	Not Available	639	Open in IMG/M
3300031572\|Ga0318515_10448543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300031573\|Ga0310915_10935209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300031573\|Ga0310915_11147487	Not Available	539	Open in IMG/M
3300031680\|Ga0318574_10818229	Not Available	546	Open in IMG/M
3300031719\|Ga0306917_10683137	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300031719\|Ga0306917_11001013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300031719\|Ga0306917_11445878	Not Available	530	Open in IMG/M
3300031763\|Ga0318537_10235122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300031771\|Ga0318546_11129218	Not Available	551	Open in IMG/M
3300031793\|Ga0318548_10366794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	707	Open in IMG/M
3300031833\|Ga0310917_10077596	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300031833\|Ga0310917_10575531	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300031879\|Ga0306919_10271998	Not Available	1280	Open in IMG/M
3300031890\|Ga0306925_10923559	Not Available	896	Open in IMG/M
3300031890\|Ga0306925_11089404	Not Available	808	Open in IMG/M
3300031890\|Ga0306925_11368455	Not Available	700	Open in IMG/M
3300031897\|Ga0318520_10447270	Not Available	794	Open in IMG/M
3300031910\|Ga0306923_11345768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300031910\|Ga0306923_12263137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	543	Open in IMG/M
3300031912\|Ga0306921_10383036	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300031912\|Ga0306921_10954965	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300031912\|Ga0306921_11237962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	829	Open in IMG/M
3300031912\|Ga0306921_11412203	Not Available	765	Open in IMG/M
3300031912\|Ga0306921_11697888	Not Available	683	Open in IMG/M
3300031912\|Ga0306921_11761471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300031941\|Ga0310912_10448444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1006	Open in IMG/M
3300031941\|Ga0310912_10654762	Not Available	816	Open in IMG/M
3300031941\|Ga0310912_11007510	Not Available	639	Open in IMG/M
3300031941\|Ga0310912_11050407	Not Available	624	Open in IMG/M
3300031942\|Ga0310916_10886374	Not Available	749	Open in IMG/M
3300031942\|Ga0310916_11207502	Not Available	625	Open in IMG/M
3300031945\|Ga0310913_10871256	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300031946\|Ga0310910_11231118	Not Available	580	Open in IMG/M
3300031947\|Ga0310909_10553500	Not Available	963	Open in IMG/M
3300031947\|Ga0310909_10604222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300031947\|Ga0310909_11491679	Not Available	539	Open in IMG/M
3300031954\|Ga0306926_10872741	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300031954\|Ga0306926_11164504	Not Available	908	Open in IMG/M
3300032001\|Ga0306922_11729548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. PAMC26660	618	Open in IMG/M
3300032059\|Ga0318533_10758362	Not Available	712	Open in IMG/M
3300032059\|Ga0318533_11185947	Not Available	559	Open in IMG/M
3300032076\|Ga0306924_10318297	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300032076\|Ga0306924_11438583	Not Available	734	Open in IMG/M
3300032076\|Ga0306924_11547769	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300032076\|Ga0306924_11758814	Not Available	648	Open in IMG/M
3300032076\|Ga0306924_12440993	Not Available	526	Open in IMG/M
3300032261\|Ga0306920_100530542	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300032261\|Ga0306920_101103261	Not Available	1151	Open in IMG/M
3300032261\|Ga0306920_103883602	Not Available	545	Open in IMG/M
3300033289\|Ga0310914_11401026	Not Available	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.37%
Aquatic	Environmental → Aquatic	2.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.37%
Sediment	Environmental → Aquatic → Sediment	2.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.46%
Loam	Environmental → Terrestrial → Soil → Loam	11.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.02%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.14%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.63%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.88%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1009090223	3300002245	Forest Soil	MGIPAQNISVGKCYITEIGQVRRVLEVKDGRVKYESRGKTAHGGSWGAGTTVGDGKFARDVEREVPCDYDPNYPAGTPLQRE*
Ga0066684_102046351	3300005179	Soil	MGVPVESITVGKCYVTEIGQIRRVLEVQDGRVKYESRGKTAHGGSWGPWTTVGDGKFAREVEREVACDYDPNYPGGTNRG*
Ga0066388_1038617911	3300005332	Tropical Forest Soil	MSVPVESVAVSKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSNLRFARDVEREVPCDYDPRYPAGTQNPIDE*
Ga0066388_1048584402	3300005332	Tropical Forest Soil	MGIPMESVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGETAHGGSWGALTTISIIRFARDVERCRYRKRCNTF*
Ga0066388_1076561701	3300005332	Tropical Forest Soil	IAVGKCYVTAIGQVRRVLDIKDAKVRYESSGKTAHGGSWGDPVGVSAVKFARDVEREVACDYDSMKPTR*
Ga0066388_1077273601	3300005332	Tropical Forest Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGALTTVSILRFARDVEREVPCDYDPRYPASRPEPNR*
Ga0066903_1008575032	3300005764	Tropical Forest Soil	MGVPVESVAVGKCYLTEIGQVRRVLEVKEAMVKYESRGKTADGGSWGALTTVSILRFARDIEREIPCDYDPRHPAGTPESNR*
Ga0066903_1016704534	3300005764	Tropical Forest Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGASWGALTTVSILRFARDVEREVPCDYDPRYPAGVPEPNR*
Ga0066903_1050117971	3300005764	Tropical Forest Soil	MGIPVTSIAVGKCYVTAIGQVRRVLEIKDAKVRYESRGKTAHGGSWGDPVGVSTVKFARDVEREVVCDYDPM
Ga0080026_100355654	3300005952	Permafrost Soil	MGIPVDGIAVGKCFVTEIGQVRRVLEVKDGKVKYESRGKTAHGGSWGDIAAVADGKFARDVDREVPCDYDPDADKVIPIDLLNASNDE*
Ga0080026_101714572	3300005952	Permafrost Soil	MGIPVESIAAGKCFVTEIGQVRRVLEVKDGKVKYESSGKTAHGGYWGDVVTVVDGKFARDVDRE
Ga0080027_101808322	3300005993	Prmafrost Soil	MGIPVESIAAGKCFVTEIGQVRRVLEVKDGKVKYESSGKTAHGGYWGDVVTVVDGKFARDVDREVPCDYDPDADKVIPIDQLNSSNDD*
Ga0066789_101651611	3300005994	Soil	SRNGRRRRVELGGRRAKERKMGIPVDGIAVGKCFVTEIGQVRRVLEVKDGKVKYESRGKTAHGGSWGDIAAVADGKFARDVDREVPCDYDPDADKVIPIDLLNASNDE*
Ga0075028_1000017326	3300006050	Watersheds	MGIPVDGIAVGKCFVTEIGQVRRVLEVKDGKVKYESRGKTAHGGSWGDVAAVADGKFARDVDREVPCDYDPDADKVIPIDQLNASNDE*
Ga0070765_1020322451	3300006176	Soil	MGVPVGSIVAGKCYVTEIGQVRRVLQAKDGKVKYESRGRTAHGGSWGAVTTVSDVKFARDVDRDVECDYRPEAS*
Ga0075021_100624854	3300006354	Watersheds	MGIPVDGIAVGKCFVTEIGQVRRVLEVKDGKVKYESRGKTAHGGSWGDVAAVADGKFARDVDREV
Ga0066710_1018429272	3300009012	Grasslands Soil	MGVPVESITVGKCYVTEIGQIRRVLEVQDGRVKYESRGKTAHGGSWGPWTTVGDGKFAREVEREVACDYDPNYPGGTNRG
Ga0126373_129798651	3300010048	Tropical Forest Soil	MGIPVTSIAVGKCYVTAIGQVRRVLEIKDAKVRYESRGKTAHGGSWGDPVGVSTVKFARDVEREVVCDYDPMKSTR*
Ga0134063_105863411	3300010335	Grasslands Soil	ESITVGKCYVTEIGQIRRVLEVQDGRVKYESRGKTAHGGSWGPWTTVGDGKFAREVEREVACDYDPNYPGGTNRG*
Ga0126372_117197421	3300010360	Tropical Forest Soil	MGVPVASVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSNLRFARDVEREVPCDYDPRYPVGTQNPIDE*
Ga0126372_126272982	3300010360	Tropical Forest Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKQAMVKYESRWKTAHGTSWGTFTTASIVRFARDVEREVPCDYDPRYPAGAPEPNR*
Ga0126378_122596711	3300010361	Tropical Forest Soil	MGVPVASVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSNLRFARDVEREVPYGYDPRYPAGTQNPIDE*
Ga0126379_128266951	3300010366	Tropical Forest Soil	VAVGKCYLTEIGQIRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSNLRFARDVEREVPCDYDPRYPAGTQNPIDE*
Ga0126379_130646311	3300010366	Tropical Forest Soil	MGVPVASVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHGGSWGALTIVSNLRFARDVEREVPCDYDPRYPAGTQSPIDE*
Ga0126381_1013837892	3300010376	Tropical Forest Soil	MGIPVTSIAVGKCYVTAIGQVRRVLEIKDAKVRYESRGKTAHGGSWGDPVGVSTVKFARDVEREVACDYDPLKSTR*
Ga0126381_1016663741	3300010376	Tropical Forest Soil	VAVGKCYLTEIGQVRRVLDIKQARVKYESRGKTAHGGSWGALTTVSILRFARDVEREVPCDYDPLDPAGTPEPDR*
Ga0126383_136690031	3300010398	Tropical Forest Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKEVMLKYESRGKTAHGGSWGALTTVSILRFARDVEREVPCDYDPRYPAPPVHQVENGPPERQ*
Ga0137391_101396893	3300011270	Vadose Zone Soil	MGIPVDGIAVGKCFVTEIGQVRRVLEVKDGRVKYESRGKTAHGGLWGDITTAADGKFARDVNREVSCDYDRDADKVIPIDQLNSSNDD*
Ga0137364_107110591	3300012198	Vadose Zone Soil	MGIPVESIAVGKCYATEIGQVRRVLEVKDGKVKYESRGKTAHGGSWGALATVGDGRFARDVEREVPCDYDPNYPAGTPPQRRE*
Ga0137377_104236613	3300012211	Vadose Zone Soil	VESVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHGGSWGAFTTVSILRFARDVEHEVPCDYNPRYPAGTPESNR*
Ga0137377_110810731	3300012211	Vadose Zone Soil	MGVPVESVTVDKCYVTEIGQVRRVLEIKNAMVKYESRGKTAHGRSWGALTTISIVRFARNVEREVPCDHDPRYPTGTPEGGVRR*
Ga0137361_100173511	3300012362	Vadose Zone Soil	MGIPVEAIAVGKCYATEIGQVRRVLEIRDGKVKYESRGKTAHGGSWGALTTVGNGRFARDVEREVPCDYDPNYP
Ga0137358_104278261	3300012582	Vadose Zone Soil	MGIPVESIAVGKCYATEIGQVRRVLEVKNGKVKYESRGKTAHGGSWGALTTVGDGTFARDVDREVPCDYDPN
Ga0126369_105448383	3300012971	Tropical Forest Soil	MGVPVESVAVGKCYLTEIGQVRRVLDIKQARVRYESRGKTAHGGSWGALTTVSILRFARDIEREIPCDYDPRHPAGTPESNR*
Ga0182036_117768501	3300016270	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGALTKVSILSFARDVEREVPCDYDPRY
Ga0182041_109176692	3300016294	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHAASWGALTTVSILRFARDVKREVPCDYDPRYLAGTPEPNR
Ga0182041_113773722	3300016294	Soil	VAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGASWGALTTVSILRFARDVEREVPCDYDPRYPAGVPERFSGSSC
Ga0182041_114014002	3300016294	Soil	MGVPVEGVTIGKCYVTEIGQVRRVLEIKNAMVKYESRGKTAHGRSWGALTTISILRFARDIEREVPCDYDPRYPTGTPEGGVRR
Ga0182041_120625121	3300016294	Soil	MGVPVKSVAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGGSWGASTTVSILRFARDVEREVPCDYDPR
Ga0182033_120938641	3300016319	Soil	MGVPVEIVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGVLTTVSILRFARDVEREVPCDYDPRYPAAGSPG
Ga0182035_108744712	3300016341	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGASWGAVTTLSILRFARDVEREVPCDYDPRYPAGTPEAGVRR
Ga0182035_112857421	3300016341	Soil	IERERRMGVPVESVAVGKCYLTEIGQVRRVLEIKEAMLKYESRGKTAHGGSWGALTTVSIIRFARDVEREVPCDYDPRYPSGTPEPNR
Ga0182032_107618321	3300016357	Soil	MGVPVEGVTIGKCYVTEIGQVRRVLEIKNAMVKYESRGKTAHGRSWGALTTISIVRFARDVEREAPCDHDPRYPTGAPEGGVRR
Ga0182032_109492211	3300016357	Soil	MGVPVESVAVGKCYLTEIGQIRRVLEIKEAMVKYESRGKTAHGRSWGALTKVSILSFARDVEREVPCDYDPRYPTGTPEGGVRQ
Ga0182032_112741261	3300016357	Soil	MGVPVEIVAVGKCYLTEIGQVRRVLEIKTAMVKYESRGKTAHGGSWGALTTVSILRFVRDVEREVPCDYDPRYPGRPVT
Ga0182034_103911562	3300016371	Soil	CYLTEIGQVRRVLEIKEAMVKYESRGKTAHAASWGALTTVSILRFARDVEREVPCDYDPRYLAGTPEPNR
Ga0182040_102997873	3300016387	Soil	MGVSVESVAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGASWGALTTVSILRFARDVEREVPCDYDPRYPAGVPEPNR
Ga0182040_112893382	3300016387	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGRSWSALTTVSIIRFARDVEREVPCDYDPRCPPL
Ga0182037_107544021	3300016404	Soil	MGVPVESVAVGKCYLTEIGQIRRVLEIKEAMVKYESRGRTAHGGSWGALTTISIIRFARDVEREFPCDYDPRYPAAGSPG
Ga0182039_107273512	3300016422	Soil	MGVPVEIVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGVLITVSILRFVRDVEREVPCDYDPRYPAPAGSPG
Ga0182039_109939002	3300016422	Soil	MRVPVESVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGALTKVSILSFARDVEREVPCDYDPRYPTGTPEAGVRP
Ga0182039_122519251	3300016422	Soil	MGVPVKSVAVGKCYLTEIGQIRRVLEIKKAMVKYESRGKTAHGGSWGALTTISIIRFARDVEREVPCDYDPRYPAAGSPG
Ga0182038_103381962	3300016445	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKNAIVKYESRGKTAHGGSWGAPIAISILRFARDVEREVPYDYDPRSR
Ga0182038_110880681	3300016445	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHAASWGALTTVSILRFARDVEREVPCDYDPRYLAVRQNPIGE
Ga0182038_112854372	3300016445	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKQARVKYESRGKTAHGASWGASITTSILRFARDVEREVSCDYDSRSG
Ga0182038_120254031	3300016445	Soil	VAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSNLRFARDVEREVPCDYDPRYPAGTQNPIDE
Ga0179592_100216533	3300020199	Vadose Zone Soil	MGIPVDGIAVGKCFVTEIGQVRRVLEVKDGRVKYESRGKTAHGGLWGDITTAADGKFARDVNREVSCDYDRDADKVIPIDQLNSSNDD
Ga0210410_107020412	3300021479	Soil	MGVPVGSIVACKCYVTEIGQVRRVLQARDGNVKYESRGRTAHGGSWGAVTTVSDVKFARDVDRDVECDYRPEAS
Ga0209009_11538911	3300027667	Forest Soil	MGIPVDGIAVGKCFVIEIGQVRRVLEVKDGRVKYESRGKTAHGGLWGDITTAADGKFARDVDREVSCDYDP
Ga0209465_106600311	3300027874	Tropical Forest Soil	MGIPVTSIAVGKCYVTAIGQVRRVLEIKDAKVRYESRGKTAHGGSWGDPVGVSTVKFARDVEREVVCDYDPMKSTR
Ga0209068_100204217	3300027894	Watersheds	MGIPVDGIAVGKCFVTEIGQVRRVLEVKDGKVKYESRGKTAHGGSWGDVAAVADGKFARDVDREVPCDYDPDADKVIPIDQLNASNDE
Ga0209526_102067602	3300028047	Forest Soil	MGIPAQNISVGKCYITEIGQVRRVLEVKDGRVKYESRGKTAHGGSWGAGTTVGDGKFARDVEREVPCDYDPNYPAGTPLQRE
Ga0308309_114218331	3300028906	Soil	MGVPVGSIVAGKCYVTEIGQVRRVLQAKDGKVKYESRGRTAHGGSWGAVTTVSDVKFARDVDRDVECDYRPEAS
Ga0318538_105297742	3300031546	Soil	MGVPVEIVAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGASWGAVTTLSILRFARDVEREVPCDYDPRYPAGTPEAGVRR
Ga0318515_104485432	3300031572	Soil	MGVPVESVAVGECYLTKIGQLRRVLEIKEAMVKYESRGKTAHGASWGALTTVSILRFARDVEREVPCDYDPRYPAAGSPG
Ga0310915_109352092	3300031573	Soil	GVPVESVAVGKCYLTEIGQIRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSIIRFARDVEREVPCDYDPRYPAAGSPG
Ga0310915_111474871	3300031573	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHAASWGALTTVSILRFARDVEREVPCDYDPRYLAGTPEPNR
Ga0318574_108182292	3300031680	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHAASWGALTTVSILRFARDVEREV
Ga0306917_106831371	3300031719	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKAAMVKYESRGKTAHGRSWGALTKVSILSFARDVEREVPCDYD
Ga0306917_110010132	3300031719	Soil	MGVPLESLAVGKCYLTEIGQIRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSIIRFARDVEREVPCDYDPRCPAAGSPG
Ga0306917_114458781	3300031719	Soil	MGVPVESVTVGKCYVTEIGQVRRVLEIKNAMVKYESRGKTAHGRSWGALTTISIVRFARDVEREVPCDHDPRYPIGTPEAGVRR
Ga0318537_102351222	3300031763	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHGASWGAVTTLSILRFARDVEREVPCDYDPRYPAAGSPG
Ga0318546_111292181	3300031771	Soil	SVAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGASWGAVTTLSILRFARDVEREVPCDYDPRYPAGVPEPNR
Ga0318548_103667942	3300031793	Soil	MGVPVEIVAVGKCYLTEIGQVRRVLEIKKGMVKYESRGKTAHGGSWGALTTVSVIRFARDVEREVPCDYDPRCPAAGSPG
Ga0310917_100775962	3300031833	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGASWGALTTVSILRFARDVEREVPCDYDPRYPAGVPEPNR
Ga0310917_105755311	3300031833	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGALTKVSILSFARDVEREVPCDYDPRYPTGTPEGGVRQ
Ga0306919_102719984	3300031879	Soil	MGVPVEGVTIGKCYVTEIGQVRRVLEIKNAMVKYESRGKTAHGRSWGALTTISIVRFARDVEREVPCDHDPRYPTGAPEGGVRR
Ga0306925_109235592	3300031890	Soil	MGVPVESVAVGKCYLTEIGQVRRVLKIKERRVKYESRGKTAHGGSWGALTTVSILRFGRDVEREVPCDYDPRYPSDTPEPNR
Ga0306925_110894042	3300031890	Soil	MGVPVEGVTIGKCYVTEIGQVRRVLEIKNAMVKYESRGKTAHGRSWGALTTISIVRFARDVEREVPCDHDPRYPTGAPE
Ga0306925_113684551	3300031890	Soil	MGVPVESVAVGKCYLTEIGQIRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSILRFARDVEREVPCDYDPRYPAAGSPG
Ga0318520_104472701	3300031897	Soil	MGVPVESVAVGKCYLTEIGQVRRVLKIKEGRVKYESRGKTAHGGSWGALTTVSILRFGRDVEREVPCDYDPRYPSDTPEPNR
Ga0306923_113457682	3300031910	Soil	MGVPVEIVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGVLTTVSILRFARDVEREVPCDYDPRYPPAGSPD
Ga0306923_122631372	3300031910	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGRSWGALTTVSIIRFARDVEREVPCDYDPRYPAGTLVARFNQIEG
Ga0306921_103830361	3300031912	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKKGMVKYESRGKTAHGGSWGALTTVSILRFARHVEREVPCDYDPRYPAT
Ga0306921_109549652	3300031912	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKQARVKYESRGKTAHGASWGASITTSILRFARDVEREVPCDYDSRSR
Ga0306921_112379621	3300031912	Soil	MRAPVESVAVGKCYLTEIGQIRRVLEIKEAMVKYESRAKTAHGGSWGALTTVSIIRFARDVEREVPCDYDPRCPAAGSPG
Ga0306921_114122032	3300031912	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGASWGAVTTLSILRFARDVEREVPCDYDPRYAAGTSEPNR
Ga0306921_116978881	3300031912	Soil	MGVPVESVAVGKCYLTEIGQIRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSILRFARDVEREVPCD
Ga0306921_117614711	3300031912	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKQAMVKYESRGKTAHGGSWGALTTVSILRFGRDVEREVPCDYDPRYPS
Ga0310912_104484443	3300031941	Soil	MGVPVESVAVGKCYLTEIGQIRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSIIRFARDVEREVPCDYDPRCPAAGSPG
Ga0310912_106547622	3300031941	Soil	MGIPMESVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSNLRFARDVEREVPCDYDPRYPAGTQNPIDE
Ga0310912_110075101	3300031941	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGQTANGRSWGALTKVSILSFARDVEREVPCDNDPRYPTGTPEGGVRR
Ga0310912_110504071	3300031941	Soil	GRRMGVPVEIVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGVLTTVSILRFARDVEREVPCDYDPRYPAAGSPG
Ga0310916_108863741	3300031942	Soil	MGVPVESVAVGKCYLTEIGQIRRVLEIKEAMVRYETRGKTAHGGSWGALTTISIIRFARDVEREVPCDYDPRYPAAGSPS
Ga0310916_112075021	3300031942	Soil	LREDRRMGVPVESVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGALTKVSILSFARDVEREVPCDNDPRYPTGTPEGGVRR
Ga0310913_108712563	3300031945	Soil	NGCSGGGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGASWGALTTVSILRFARDVEREVPCDYDPRYPAGVPEPNR
Ga0310910_112311181	3300031946	Soil	GRSARTKMGVPVASLIVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSNLRFARDVEREVPCDYDPRYPAGTQNPIDE
Ga0310909_105535002	3300031947	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHAASWGALTTVSILRFARDVEREVPCDYDPRYPAGAPEPNR
Ga0310909_106042222	3300031947	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKNAMVKYESRGKTAHGRSWGALTTISIVRFARDVDREVPCD
Ga0310909_114916791	3300031947	Soil	MRVPVESVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGALTKVSILSFARDVEREVPCDYDPRYPTGTPEGGVRQ
Ga0306926_108727411	3300031954	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGALTKVSILSFARDVEREVPCDYDPRYPTGTP
Ga0306926_111645041	3300031954	Soil	VTVGKCYVTEIGQVRRVLEIKNAMVKYESRGKTAHGRSWGALTTISIVRFARDVEREVPCDHDPRYPIGTPEAGVRR
Ga0306922_117295481	3300032001	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKKAMVKYESRGKTAHGRSWGALTTISILRFARDVEREVPCDYDPRYPTGTPE
Ga0318533_107583621	3300032059	Soil	MGVPVESVAVGKCYLTEIGQIRRVLEIKEAMVKYESRGKTAHGESWGALTTVSILRFARDVEREVPCDYDPRYPAPRRFTIG
Ga0318533_111859472	3300032059	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKQARVKYESRGKTAHGASWGASITTSILRFARDVEREVSCDYDSRSR
Ga0306924_103182974	3300032076	Soil	MGVPVEIVAVGKCYLTEIGQVRRVLEIKEARVKYESRGKTAHGASWGALTTVSILRFARDVEREVPCDYDPRYPAGVPEPNR
Ga0306924_114385832	3300032076	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKNAIVKYESRGKTAHGGSWGAFIAISILRFARDVEREVPCDYNPRSR
Ga0306924_115477692	3300032076	Soil	MGVPVESVAVGKCYVTEIGQVRRVLEIKEAMVKYESRGKTAHGRSWGALTKVSILSFARDVEREVPCDYDPR
Ga0306924_117588141	3300032076	Soil	MGVPVASVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSNLRFARDVEREVPCDYDPRYPAGTQNPIDE
Ga0306924_124409931	3300032076	Soil	MGVPVESVAVGKCYLTEIGQVRRVLEIKEAMVKYESRGKTAHAASWGALTTVSILRFARDVEREVPCDYDPRYPAPAGSPG
Ga0306920_1005305422	3300032261	Soil	VAVGKCYVTEIGQVRRVLEIKQVRVKYESRGKTAHGASWGASITTSILRFARDVEREVSCDYDSRSR
Ga0306920_1011032611	3300032261	Soil	MGVPVESVAVGKCYLTEIGQIRRVLEIKEAMVKYESRGRTAHGGSWGALTTISIIRFARDGEREVPCDYDPRYPAAGSPG
Ga0306920_1038836022	3300032261	Soil	CFPVGARVERGRRMGVPVESAAVGKCYVTEIGQVRRVLEIKNAIVKYESRGKTAHGGSWGAFIAITILRFARDVEREVPCDYDPRSR
Ga0310914_114010261	3300033289	Soil	MGVPVESVAVGKCYLTEIGQIRRVLEIKEAMVKYESRGKTAHGGSWGALTTVSIIRFARDVEREVPCDYDPRYPAAGSPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081556

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences