Metagenome / Metatranscriptome Family F081597

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081597
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	87 residues
Representative Sequence	MARISRTTWLKAAALVVAFASLTINFGLIDLIDGFTGYVDQARNQILDVGWGAVFGVILPLGLLTQLRRPERRIAGIQQTAVVAVALALAGAA
Number of Associated Samples	87
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.07 %
% of genes near scaffold ends (potentially truncated)	98.25 %
% of genes from short scaffolds (< 2000 bps)	95.61 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.614 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.035 % of family members)
Environment Ontology (ENVO)	Unclassified (31.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.632 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.46% β-sheet: 0.00% Coil/Unstructured: 35.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF07729	FCD	6.14
PF07040	DUF1326	6.14
PF01738	DLH	4.39
PF00027	cNMP_binding	4.39
PF00583	Acetyltransf_1	3.51
PF00196	GerE	1.75
PF02566	OsmC	1.75
PF06441	EHN	0.88
PF03795	YCII	0.88
PF12802	MarR_2	0.88
PF02801	Ketoacyl-synt_C	0.88
PF13207	AAA_17	0.88
PF13302	Acetyltransf_3	0.88
PF01361	Tautomerase	0.88
PF01565	FAD_binding_4	0.88
PF01061	ABC2_membrane	0.88
PF01894	UPF0047	0.88
PF04909	Amidohydro_2	0.88
PF03706	LPG_synthase_TM	0.88
PF02517	Rce1-like	0.88
PF07883	Cupin_2	0.88
PF07690	MFS_1	0.88
PF10009	DUF2252	0.88
PF01545	Cation_efflux	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	6.14
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	6.14
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	6.14
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.75
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.75
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.88
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.88
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.88
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.88
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.88
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.88

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.61 %
Unclassified	root	N/A	4.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.61 %
Unclassified	root	N/A	4.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.61 %
Unclassified	root	N/A	4.39 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.60 %
Unclassified	root	N/A	4.39 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.60 %
Unclassified	root	N/A	4.39 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	80.70 %
Unclassified	root	N/A	4.39 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	71.05 %
Unclassified	root	N/A	4.39 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.75 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	71.05 %
Unclassified	root	N/A	4.39 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.75 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.88 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	71.05 %
Unclassified	root	N/A	4.39 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Intrasporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium	1.75 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.88 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	71.05 %
Unclassified	root	N/A	4.39 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Intrasporangium oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	1.75 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.88 %
Kribbella soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	71.05 %
Unclassified	root	N/A	4.39 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Intrasporangium oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	1.75 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.88 %
Kribbella soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10948215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300002568\|C688J35102_117872470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300002568\|C688J35102_118418421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300002568\|C688J35102_119400593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300002568\|C688J35102_120053438	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300002911\|JGI25390J43892_10169210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300004153\|Ga0063455_100002952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2970	Open in IMG/M
3300004157\|Ga0062590_100196966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1450	Open in IMG/M
3300004479\|Ga0062595_100074990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1682	Open in IMG/M
3300004479\|Ga0062595_101160382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300005093\|Ga0062594_100799102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	872	Open in IMG/M
3300005353\|Ga0070669_101254384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	641	Open in IMG/M
3300005356\|Ga0070674_101518413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300005366\|Ga0070659_100012095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6390	Open in IMG/M
3300005435\|Ga0070714_100201130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1822	Open in IMG/M
3300005445\|Ga0070708_100385745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1321	Open in IMG/M
3300005446\|Ga0066686_10550365	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300005526\|Ga0073909_10385969	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005543\|Ga0070672_101979296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	525	Open in IMG/M
3300005548\|Ga0070665_100312251	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300005548\|Ga0070665_102423913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300005615\|Ga0070702_100443228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	940	Open in IMG/M
3300005616\|Ga0068852_100379032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1387	Open in IMG/M
3300006028\|Ga0070717_10992505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300006031\|Ga0066651_10627410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300006175\|Ga0070712_101563475	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300006581\|Ga0074048_13384181	Not Available	674	Open in IMG/M
3300006581\|Ga0074048_13401122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1421	Open in IMG/M
3300006800\|Ga0066660_11103459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300006854\|Ga0075425_101457781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300006871\|Ga0075434_101859008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300006880\|Ga0075429_100929228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300009098\|Ga0105245_10065490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3286	Open in IMG/M
3300009098\|Ga0105245_12134141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300009098\|Ga0105245_12886156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300009137\|Ga0066709_103888131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300009147\|Ga0114129_10477373	Not Available	1632	Open in IMG/M
3300009148\|Ga0105243_10477233	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300009174\|Ga0105241_10163234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1833	Open in IMG/M
3300009176\|Ga0105242_11782080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300009176\|Ga0105242_12600731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300010325\|Ga0134064_10396692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300010333\|Ga0134080_10302819	Not Available	718	Open in IMG/M
3300011119\|Ga0105246_11487093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300011119\|Ga0105246_11822547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300012198\|Ga0137364_10840259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300012198\|Ga0137364_11033777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300012211\|Ga0137377_11941344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300012212\|Ga0150985_104451640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300012212\|Ga0150985_104761684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300012212\|Ga0150985_109689919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300012469\|Ga0150984_100673449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300012469\|Ga0150984_108195676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300012951\|Ga0164300_10587949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300012955\|Ga0164298_10252056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1065	Open in IMG/M
3300012955\|Ga0164298_11189221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300012958\|Ga0164299_10107444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1464	Open in IMG/M
3300012958\|Ga0164299_10465266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300012960\|Ga0164301_11031251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300012960\|Ga0164301_11305561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300012960\|Ga0164301_11848709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300012976\|Ga0134076_10485224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300012985\|Ga0164308_11565670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300012986\|Ga0164304_11349713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300012987\|Ga0164307_10624579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	834	Open in IMG/M
3300012987\|Ga0164307_11913085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300012989\|Ga0164305_11402949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300012989\|Ga0164305_11661406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300012989\|Ga0164305_12236193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300013296\|Ga0157374_11981618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300013307\|Ga0157372_12067567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300014154\|Ga0134075_10509136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300014326\|Ga0157380_13066475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300014326\|Ga0157380_13468213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300014969\|Ga0157376_10079541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2810	Open in IMG/M
3300014969\|Ga0157376_11661994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300015356\|Ga0134073_10430697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300015371\|Ga0132258_11065866	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300015371\|Ga0132258_13232929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1123	Open in IMG/M
3300015371\|Ga0132258_13602613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1059	Open in IMG/M
3300015372\|Ga0132256_101218696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	866	Open in IMG/M
3300015372\|Ga0132256_103410691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300015374\|Ga0132255_102953792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300018431\|Ga0066655_10497716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300018433\|Ga0066667_12073063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300018482\|Ga0066669_10351215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1225	Open in IMG/M
3300018482\|Ga0066669_12452808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300024055\|Ga0247794_10264923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300024179\|Ga0247695_1076039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300024222\|Ga0247691_1019059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300025904\|Ga0207647_10295424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	923	Open in IMG/M
3300025905\|Ga0207685_10322616	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300025911\|Ga0207654_10746396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300025923\|Ga0207681_10325680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1223	Open in IMG/M
3300025927\|Ga0207687_10132644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1880	Open in IMG/M
3300025928\|Ga0207700_10599333	Not Available	980	Open in IMG/M
3300025929\|Ga0207664_11671058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300025931\|Ga0207644_10470977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300025934\|Ga0207686_10806584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300025937\|Ga0207669_10545613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300025939\|Ga0207665_11397365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300025940\|Ga0207691_11564974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300025961\|Ga0207712_11675667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300026067\|Ga0207678_11483705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300026075\|Ga0207708_11811340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300027821\|Ga0209811_10201546	Not Available	751	Open in IMG/M
3300028145\|Ga0247663_1021049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300028596\|Ga0247821_10739007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300028608\|Ga0247819_10852714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300028755\|Ga0307316_10350036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300031858\|Ga0310892_11363276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300031892\|Ga0310893_10411315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300032012\|Ga0310902_10743788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300032122\|Ga0310895_10692159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.77%
Host-Associated	Host-Associated	41.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.77%
Plants	Host-Associated → Plants	41.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.18%
Loam	Environmental → Terrestrial → Soil → Loam	14.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.14%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	8.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.51%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.63%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_109482152	3300001686	Soil	MARTARTTGLKAVALAVAFASLTINFGLIDFVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRPDTRIAGIQQT
C688J35102_1178724701	3300002568	Soil	LKAAALLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPDRRIAGIQQTGLVAIALALAG
C688J35102_1184184211	3300002568	Soil	MRHPRRTTWLKATASVVAFASLTINFGLIDLVDGFTGYIDQARNQILDVGWGAVFGLILPFGVLSQLRSPERRIAGIQQTVVVALALAVSGAAGQRAWYVALAAGIAAA
C688J35102_1194005932	3300002568	Soil	MEVGRERILNNERRLKVTIVARISRTTWLKATALVVAFASLTINFGLIDLVDGFTGYVDQTRNQVLDVGWGAVFGLILPLGLLTQLRAPERRIAGIQQTAFVALALALAGAAGQRGWYVVLAGGIGVVSAVLVALH
C688J35102_1200534383	3300002568	Soil	MARPRRTTWLKVTACLFAIASLTINFGLIDLIDGFTGYVDQARNQVLDVGWGAVFGLILPLGLLSQLRSPERRIAGIQQTAVVAAALVLAGAAGQRPRYFA
JGI25390J43892_101692102	3300002911	Grasslands Soil	MKSRVAVMARISRTTWLKTAALVVAFASLTINFGLIDLIDGFTGYVDQARNQILDVGWGAVFGVILPLGLLTQLRRPERR
Ga0063455_1000029524	3300004153	Soil	LKAAALLIAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPER
Ga0062590_1001969661	3300004157	Soil	MARISRTTWLKAAALVVAFASLTINFGLIDLIDGFTGYVDQARNQILDVGWGAVFGVILPLGLLTQLRRPERRIAGIQQTAVVAVALALAGAA
Ga0062595_1000749902	3300004479	Soil	MARTRWMKALAVVVALASLTINFGLIDLIDGYIGFVDEVLDAGWGLVFGVILPIALLAQLRRPERRIAGIQQTGIVALALAAAAVIGEAQWYVALAAGIAGA*
Ga0062595_1011603821	3300004479	Soil	MARVTWLKAVAVVAAVASLTINFGVVDLVDGFTGYIDQERNQVLDAGWGAVFGVVLPLGLLALLRRPERRIAAVQQTAVVAFALAVAGAA
Ga0062594_1007991022	3300005093	Soil	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVIPLGLLAQLRRPERRIAGIQQVAVVALALGMAGVAGEAWRYVA
Ga0070669_1012543841	3300005353	Switchgrass Rhizosphere	VVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVIPLGLLAQLRRPERRIAGIQQVAVVAFALGMAGVAGEAWRYV
Ga0070674_1015184132	3300005356	Miscanthus Rhizosphere	MARVTWLKAVAVVAAVASLTINFGVVDLVDGFTGYIDQERNQVLDAGWGAVFGVVLPLGLLA
Ga0070659_1000120957	3300005366	Corn Rhizosphere	LLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPERRIAGIQQTALVAIALALAGVAGEAWWYLVLGGGV
Ga0070714_1002011302	3300005435	Agricultural Soil	MAHMSRTTWLKVTALVVAFASLTVNFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRPERRI
Ga0070708_1003857451	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPERRIAGI
Ga0066686_105503652	3300005446	Soil	MARISRTTWLKTAALVVAFASLTINFGLIDLIDGFTGYVDQARNQILDVGWGAVFGVILPLGLLT
Ga0073909_103859691	3300005526	Surface Soil	MARTRWMKALALLLALASLTINFGLIDLIDGYTGFVDQARNQVLDAGWGLVFGVLLPIGLLAQLRRPERRIAG
Ga0070672_1019792961	3300005543	Miscanthus Rhizosphere	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVIPLGLLAQLRRPERRIAGIQQVAVVALALGMAGVAGEAWRY
Ga0070665_1003122511	3300005548	Switchgrass Rhizosphere	MARVTSLKAVAVVAAVASLTINFGVIDLVDGFTGYIDQERNQVLDAGWGAVFGVVLPLGLLALLRRPERRIAGVQQTAVVGLALAVAGAAGESWRYLALAAGVAGVSAVLLALHPERKTFGVPGRH
Ga0070665_1024239131	3300005548	Switchgrass Rhizosphere	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYTGYIDQARNQVLDAGWGLVFGVVIPLGLLAQLRRPERRIAGIQQVAVVALALGIAGVAGEAWRYVALATGVAGVGALLV
Ga0070702_1004432281	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVIPLGLLAQLRRPERRIAGIQQVAVVALALGMAGVAGEAWRYVAL
Ga0068852_1003790321	3300005616	Corn Rhizosphere	LLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPERRIAGIQQTALVAIALALAGVAGEAWW
Ga0070717_109925051	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAHMSRTTWLKVTALVVAFASLTVNFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRPERRIAAIQQTAVVALALAL
Ga0066651_106274101	3300006031	Soil	MPFTSCTTWLKVVAVICAVASLTINFGLIDLVDGFTGYIDQARNQVLDVGWGTVFGLILPLGLLAQLRRPERRIAGIQQIGVVALALAVSAAVGQQWWYLALAAGIAGLCAILL
Ga0070712_1015634751	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VLAMLFAFALLTLNFGVIDLVDGFTGFVDQQRNPVLDVGWGALFGVVLPIGFLSQVRHPERRIA
Ga0074048_133841812	3300006581	Soil	MKAVALVVGLASLTINFGLIDLIDGYTGFVDQARNQVLDAGWGLVFGVVLPIGLFAQLRRPERRIA
Ga0074048_134011221	3300006581	Soil	MKALALLLALASLTINFGLIDLIDGYTGFVDQARNQVLDAGWGLVFGVILPIALLAQLRRPERRIAGIQQTGIVALALALAAVLGGAWSYLALAAGIAGACAVLLALHPA
Ga0066660_111034591	3300006800	Soil	MALVSRTTCLKTVAVVAAFASLTINFGLIDLIDGFTGYVDQARNQVLDVGWGAMFGVVVPFGLLTQLRRPEWRIAGTQQIALVALALAVAGLAGEAWWYLTLALGIAAM
Ga0075425_1014577811	3300006854	Populus Rhizosphere	MPRATRTTGLKAVALLVGLASLTINFGLIDLIDGYTGYVDQARNQVLDAGWGLVFGVVLPLGLFAQLRRPERRIAGIQQTAAVGL
Ga0075434_1018590082	3300006871	Populus Rhizosphere	MERISRTTYLKAVALVAALASLTINFGLIDLVDGFTGYVDQERNQILDVGWGAVFGLILPLGLLAQLRRPERRIAWVQQTAVVALALVLAGAAGESWWYLVLAAGVAGVSAVLLALHPA
Ga0075429_1009292282	3300006880	Populus Rhizosphere	MGRSARTTWLKAVALVVALASLTINFGLIDLIDGYTGYIDQERNQVLDAGWGLVFGVILPLGLLAQL
Ga0105245_100654905	3300009098	Miscanthus Rhizosphere	LLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPERRIAGIQQTALVAI
Ga0105245_121341411	3300009098	Miscanthus Rhizosphere	MARVTWLKAVAVVAAVASLTINFGVVDLVDGFTGYIDQERNQVLDAGWGAVFGVVLPLGLLAL
Ga0105245_128861561	3300009098	Miscanthus Rhizosphere	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVIPLGLLAQLRRPERRIAGIQQVAVVAL
Ga0066709_1038881312	3300009137	Grasslands Soil	MIRFKTLLTLIAVASLTVNFGLADLIDGFTGFVDEGRNQVLDAGWGAVFGILLPLGLLTQLRSARPRIAGLQQATLVAL
Ga0114129_104773733	3300009147	Populus Rhizosphere	MPRVNWLKAVALVVALASLTINFGLIDFVDGFTGYVDQARNQVLDVGWGAVFGVVLPLGLLAQLRRPERRIAGIQQTSVVALA
Ga0105243_104772331	3300009148	Miscanthus Rhizosphere	MARATRTTGLKAVALLLALASLTVNYGLIDLIDGYTGYIDQARNQVLDAGWGLVFGVVLPLGLLAQLRRP
Ga0105241_101632341	3300009174	Corn Rhizosphere	LLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPERRIAGIQQTALVAIALALAGVAGEAWWYLVLAGGVAGAFAVL
Ga0105242_117820802	3300009176	Miscanthus Rhizosphere	MARVTWLKAVAVVAAVASLTINFGVVDLVDGFTGYIDQERNQVLDAGWGAVFGVVLPLGLLALLRRPERRIAGQ
Ga0105242_126007312	3300009176	Miscanthus Rhizosphere	MARIGRTTWLKALALVVALASLTINFGLIDLVDGFTGYVDQQRNQILDAGWGAVFGIVVPLGLLAQLRRPERRIAGIQQTSV
Ga0134064_103966922	3300010325	Grasslands Soil	MKSRVAVMARISRTTWLKTAALVVAFASLTINFGLIDLIDGFTGYVDQARNQILDVGWGAVFGVVLPLGLLTQLRRPERRVAGIQQTAVVALALALAGAAGQKWWYLALAGGVAGV
Ga0134080_103028191	3300010333	Grasslands Soil	MPFTSCTTWLKVVAVICAVASLTINFGLIDLVDGFTGYIDQARNQVLDVGWGTVFGLILP
Ga0105246_114870932	3300011119	Miscanthus Rhizosphere	MARVTSLKAVAVVAAVASLTINFGVIDLVDGFTGYIDQERNQVLDAGWGAVFGVVLPLGLLALLRRPERRIAGLQQTAVVGLALAVA
Ga0105246_118225471	3300011119	Miscanthus Rhizosphere	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVIPLGLLAQLRRPERRIAGIQQVAVVALALGMAGVAGEAWRYVALAAGVAGVGALL
Ga0137364_108402591	3300012198	Vadose Zone Soil	MKTVAVAVALASLTINFGLIDLIDGFTGYVDQARNQVLDVGWGAMFGVIVPLGLLTQL
Ga0137364_110337771	3300012198	Vadose Zone Soil	MARISRTTWLKTAALVVAFASLTINFGLIDLIDGFTGYVDQARNQILYVGWGAVFGVILPLGLLTQLRRPERRVAGIQQTAVVALALA
Ga0137377_119413442	3300012211	Vadose Zone Soil	MARISRTTWLKTVALVVAFASLTINFGLIDLIDGFTGYVDQARNQILDVGWGAVFGVILPLGLLTQLRRPERRVAGIQ
Ga0150985_1044516401	3300012212	Avena Fatua Rhizosphere	MWLKVVAFVVALASLTINFGLIDLIDGFTGYVDQARNQILDVGWGAVFGVILPLGLLSQL
Ga0150985_1047616842	3300012212	Avena Fatua Rhizosphere	MEVGRERILNNERRLKVTIVARISRTTWLKATALVVAFASLTINFGLIDLVDGFTGYVDQARNQILDVGWGAVFGLILPLGLLTQLRAPERRIAGIQQTAVV
Ga0150985_1096899191	3300012212	Avena Fatua Rhizosphere	LKAAALLVAFASLTINFGLIDLVDEFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPERRIAGIQQTGLVVIALAVAGAAGAAWWYLVLAGGVALAFAVL
Ga0150984_1006734492	3300012469	Avena Fatua Rhizosphere	MARTARTTGLKVVALVVAFASLTINFGLIDFVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRSETRIAGIQQ
Ga0150984_1081956762	3300012469	Avena Fatua Rhizosphere	LKAAALLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPDRRIAGIQQ
Ga0164300_105879491	3300012951	Soil	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVVPLGLVAQLRRPERRIAGIQQVAVVALALGMAGVAGEAWRYVAL
Ga0164298_102520562	3300012955	Soil	MVVVMARISRTTWLKVAALVVALASLTVNFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRPERRIAAIQQTAVVALALALAGA
Ga0164298_111892211	3300012955	Soil	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYTGYIDQARNQVLDAGWGLVFGVILPLGLLAQLRRPERRIAGIQQTVVVALALAMAGVLGEAWPYGAV
Ga0164299_101074443	3300012958	Soil	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVIPLGLLAQLRRPERRIAGIQQVAVVALALGMAGVAGEAWRYVALATGVAGVGALLVALHP
Ga0164299_104652661	3300012958	Soil	MARSTRTTWLKAVALMGALASLTINFGLIDLMDGYTGYIDQARNQVLDAGWGLVFGVILPLGLLAQLRRPERRIAGIQQTAVVALALAMAGVAGEAWRYA
Ga0164301_110312512	3300012960	Soil	MALATALASLTINFGLIDLIDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLTQLRRPERRIAGIQQMAVVASALALAGV
Ga0164301_113055611	3300012960	Soil	VIGAVASLTINFGLIDLIDGFTGYVDQARNQVLDVGWGALFGLIVPLGLLAQL
Ga0164301_118487091	3300012960	Soil	MVVVMARISRTTWLKVAALVVARASLTVNFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRPERRIAAIQQTAVVALALALAGA
Ga0134076_104852241	3300012976	Grasslands Soil	MARISRTTWLKTAALVVAFASLTINFGLIDLIDGFTGYVDQARNQILDVGWGAVFGVILPLGLLTQLRRPERRVAGIQQTAVVAL
Ga0164308_115656701	3300012985	Soil	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVIPLGLLAQLRRPERRIAGIQQVAVVALALGMAGVAGEAWRYVALAAGVA
Ga0164304_113497131	3300012986	Soil	MARMRRTTWLKGLALVFALVSLTINFGLIDLVDGFTGYVDQARNQILDVGWGAVFGVILPLGLLAQLRRPERRIAGIQQTAVVALALA
Ga0164307_106245792	3300012987	Soil	MKALALLFALASLTINFGLIDLIDGYTGFVDQARNQVLDAGWGLVFGVILPVALLAQLRRPERRIAGIQQTGIVALALAVAA
Ga0164307_119130852	3300012987	Soil	MARATRTTWLKAVAVVVALASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRAR
Ga0164305_114029491	3300012989	Soil	MARSTRTTWLKAVALMVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVVPLGLVAQLRRPERRIAGIQQVAVVALAL
Ga0164305_116614061	3300012989	Soil	MVVVMARISRTTWLKVAALVVALASLTVNFGLIDLVDGFTGYADQESTQVLDVGWGAVFGVFLPL
Ga0164305_122361932	3300012989	Soil	MKALALLLALASLTINFGLVDLIDGYTGFVDQARNQVLDAGWGLVFGVILPVALLAQLRRPERRIAGIQQTGIVALALAVAAVL
Ga0157374_119816181	3300013296	Miscanthus Rhizosphere	MARVTSLKAVAVVAAVASLTINFGVIDLVDGFTGYIDQERNQVLDAGWGAVFGVVLPLGLLALLRRPERRIAGVQQTAVVGLA
Ga0157372_120675671	3300013307	Corn Rhizosphere	LLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPE
Ga0134075_105091361	3300014154	Grasslands Soil	MARISRTTWLKTAALVVAFASLTINFGLIDLIDGFTGYVDQARNQILDVGWGAVFGVILPLGLLTQLRRPERRVAGIQQTAV
Ga0157380_130664752	3300014326	Switchgrass Rhizosphere	MARIGRTTWLKALALVVALASLTINFWLIDLVDGFTGYVDQQRNQILDAGWGAVFGIVVPLGLLAQLRRPERRIAGIQQTSVVAIALALAGAAGEQWWYLLLAAGVAAASA
Ga0157380_134682132	3300014326	Switchgrass Rhizosphere	MARATRTTGLKAVALLLALASLTVNYGLIDLIDGYTGYIDQARNQVLDAGWGLVFGVVLPLGLLAQLRRPERRIAGIQQTAAVGFVLAIASAAGEEWRYMALAAGISAACALLLALHPA
Ga0157376_100795415	3300014969	Miscanthus Rhizosphere	VVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVIPLGLLAQLRRPERRIAGIQQVAVVALALGMAGVAGEAWR
Ga0157376_116619942	3300014969	Miscanthus Rhizosphere	MARVGRTGWLKTTALVVVVASLTVNFGLIDLIDGFTGYVDEERNQVLDVGWGAVFGLVIPLSLLAQLRRPERRIAGIQTMAVVAVALALAGAAGEQWRYMAL
Ga0134073_104306971	3300015356	Grasslands Soil	MPFTSCTTWLKVVAVICAVASLTINFGLIDLVDGFTGYIDQARNQVLDVGWGTVFGLILPLGLLAQLRRPERRIAGIQQIGVVALALAVSAAVGQQWWYLALAAGIA
Ga0132258_110658661	3300015371	Arabidopsis Rhizosphere	MARMSRTTWLKTTALVFAFASLTVNFGLIDLVDGFTGYVDQARNQILDVGWGAVFGVILPLGLLAQLRRPELRIAGIQQTAVVACALALAGAAGQSWRYLAPA
Ga0132258_132329294	3300015371	Arabidopsis Rhizosphere	MARSTRTTWLKAVALMVALASLTINFGLIDLMDGYTGYIDQARNQVLDAGWGLVFGVILPLGLLAQLRRPERRIAGL
Ga0132258_136026131	3300015371	Arabidopsis Rhizosphere	LASLTINFGLIDLIDGYTGYVDQARNQVLDAGWGLVFGVIVPLGLLAQLRRPERRIAGIQQTAVVAFVLGVAGAAGEAWWYLVLAAGITGA
Ga0132256_1012186961	3300015372	Arabidopsis Rhizosphere	VLVLALALLTLNFGLVDLIDGFTGLVDQNRNVVLDAGWGAVFGVVLPLGLLAQLRRPGQRIAGLQQTALVAVVL
Ga0132256_1034106912	3300015372	Arabidopsis Rhizosphere	MARVTSLKAVAVVAAVASLTINFGVIDLVDGFTGYIDQERNQVLDAGWGAVFGVVLPLGLLALLRRPERRIAAVQQTAVVGLALAVAGAAGESWRYLALAAGV
Ga0132255_1029537922	3300015374	Arabidopsis Rhizosphere	MARVTWLKAVAVVAAVASLTINFGVVDLVDGFTGYIDQERNQVLDAGWGAVFGVVLPLGLLALLRRPERRIAGVQQTAVVGLALAVAGTAGESWRY
Ga0066655_104977162	3300018431	Grasslands Soil	MALVSRTTCLKTVAVVAAFASLTINFGLIDLIDGFTGYVDQARNQVLDVGWGAMFGVVVPFGLLTQLRRPEWRIAGIQQIALVALALAVAGLAGEAWWYLTLALGIAAICVTVLTLHPARRTFFDSGLRL
Ga0066667_120730631	3300018433	Grasslands Soil	MARISRTTCLKTAALVVAFASLTINFGLIDLIDGFTGYVDQARNQILDVGWGAVFGVILPLGLLTQLRRPERRVA
Ga0066669_103512154	3300018482	Grasslands Soil	MALMSRTTWLKAVALVVAFASLTINFGLIDLVDGFTGYVDQARNQILDVRWRAVFGVLLPVGFLTHRRRPQQHMP
Ga0066669_124528081	3300018482	Grasslands Soil	MTTSRMSGLKAAALVFALASLTLNFGLIDLIDGFTGYVDQSRNQVLDVGWGAVFGIILPLGMLSQLRRPDRRIAGVQQTATVGFALAVAGAAG
Ga0247794_102649231	3300024055	Soil	MARISRTTWLKAAALVVAFASLTINFGLIDLIDGFTGYVDQARNQILDVGWGAVFGVILPLGLLTQLRRPERRIAGIQQTAVVAVALALAGAAG
Ga0247695_10760392	3300024179	Soil	MAHMSRTTWLKVTALVVAFASLTVNFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRPERRIAAIQQTAVVALALALA
Ga0247691_10190591	3300024222	Soil	MAHMSRTTWLKVTALVVAFASLTVNFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRPERRIAAIQQTAVVALALALAAVAGEN
Ga0207647_102954241	3300025904	Corn Rhizosphere	LLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPERRIAGIQQTALVAIALALAGVA
Ga0207685_103226161	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LLVPRRWPVRRRVVVMAHISRTTWLKVAALVVAFASLTVNFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGL
Ga0207654_107463961	3300025911	Corn Rhizosphere	LLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPERRIAGIQQTALVAIALALAGVAGEAWWYLVLGSGVAGAFAVLVAL
Ga0207681_103256801	3300025923	Switchgrass Rhizosphere	LLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPERRIAG
Ga0207687_101326441	3300025927	Miscanthus Rhizosphere	LLVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPERRIAGIQQTALVAIALALAGVAGEAWWYLVLGGGVA
Ga0207700_105993332	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MASMRRTTWLKGLALVFALVSLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRPERRIAGIQQTA
Ga0207664_116710581	3300025929	Agricultural Soil	MASMRRTTWLKGLALVFALVSLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRPERRIAG
Ga0207644_104709771	3300025931	Switchgrass Rhizosphere	MTRTRRTTWLKVTALVAAIASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRAPERRIAGIQQTVVVASTLALAGAAGRSWWYLALAAGIGLVSALLLALHP
Ga0207686_108065842	3300025934	Miscanthus Rhizosphere	MARVTSLKAVAVVAAVASLTINFGVIDLVDGFTGYIDQERNQVLDAGWGAVFGVVLPLGLLALLRRPERRIAGVQQTAVVGLALAVAGAAGESWRYLALAAGVAGVS
Ga0207669_105456131	3300025937	Miscanthus Rhizosphere	MARIGRTTWLKALALVVALASLTINFGLIDLVDGFTGYVDQQRNQILDAGWGAVFGIVVPLGLLAQLRRPERRIA
Ga0207665_113973652	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTRRTTWLKVTALVAAIASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRAPERRI
Ga0207691_115649741	3300025940	Miscanthus Rhizosphere	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYSGYIDQARNQVLDAGWGLVFGVVIPFGLLAQLRRPERRIAGIQQVAVVALALGMAGVAGEAWRY
Ga0207712_116756671	3300025961	Switchgrass Rhizosphere	MARSTRTRWLKAVALVVALASLTINYGLIDLIDGYSRYIDQARNQVLDAGWGLVFGVVIPLGLLAQLRRPERRIAGIQQVAVVALALGMAGVAGEAWR
Ga0207678_114837052	3300026067	Corn Rhizosphere	MAHMSRTTWLKVTALVVAFASLTVNFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLR
Ga0207708_118113402	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAHISRTTWLKVAALVVAFASLTVNFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRPERRIAAIQ
Ga0209811_102015462	3300027821	Surface Soil	MARTRSMKAVALVVALASLTINFGLIDLIDGYTGFVDQARNQVLDAGWGLVFGVVLPVGLLA
Ga0247663_10210492	3300028145	Soil	MAHMSRTTWLKVTALVVAFASLTVNFGLIDLVDGFTGYVDQARNQVLDVGWGAVFGVILPLGLLSQLRRPERRIAAIQQTAV
Ga0247821_107390072	3300028596	Soil	MTRVGWLKAVALVTALASLTINFGLIDLVDGFTGYVDQERNQVLDVGWGAVFGVVLPLGLLSQLRCPERRIAGVQQ
Ga0247819_108527141	3300028608	Soil	MVALASLTINFGLIDLMDGYTGYIDQARNQVLDAGWGLVFGVILPLGLLAQLRRPERRIAGIQQTVVVALALAMAGVAGEA
Ga0307316_103500361	3300028755	Soil	MSRVSWLRAVALVAALASLTINFGLIDLIEGFSGYVDQERNQILDLGWGAVFGLILPLGLLAQLRFPERRIAGV
Ga0310892_113632761	3300031858	Soil	MPRTKWMKALALLLALASLTINFGLVDLIDGYTGFVDQARNQVLDAGWGLVFGVILPVALLAQLRRPERRIAGIQQ
Ga0310893_104113151	3300031892	Soil	MGRSDRTTWLKAVALVVALASLTINFGLIDLIDGYTGYIDQERNQVLDAGWGLVFGVILPLGLLAQLRRPERRIAGIQQTVVVALALAMAGVAGEAWRYVALAAGLAGVGAVLVFLHPA
Ga0310902_107437881	3300032012	Soil	MAYMSRTTWLKVTALVVAFASLTINFGLIDLVDGFTGYVDQARNQVLDVGWGAMFGVILPLGLLAQLRRPERRIAGI
Ga0310895_106921591	3300032122	Soil	MGRSDRTTWLKAVALVVALASLTINFGLIDLIDGYTGYIDQERNQVLDAGWGLVFGVILPLGLLAQLRRPERRIAGIQQTVVVALALAMAGVAGEAWRYVAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081597

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences