Metagenome Family F081689

Basic Information
Family ID	F081689
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	90 residues
Representative Sequence	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Number of Associated Samples	92
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	30.28 %
% of genes near scaffold ends (potentially truncated)	43.86 %
% of genes from short scaffolds (< 2000 bps)	73.68 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (63.158 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (15.790 % of family members)
Environment Ontology (ENVO)	Unclassified (34.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.386 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.05% β-sheet: 42.05% Coil/Unstructured: 40.91%
Feature Viewer

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Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00381	PTS-HPr	61.40
PF07399	Na_H_antiport_3	6.14
PF00903	Glyoxalase	3.51
PF02922	CBM_48	1.75
PF02653	BPD_transp_2	1.75
PF13023	HD_3	1.75
PF12681	Glyoxalase_2	1.75
PF01152	Bac_globin	0.88
PF07690	MFS_1	0.88
PF13416	SBP_bac_8	0.88
PF01894	UPF0047	0.88
PF05199	GMC_oxred_C	0.88
PF02371	Transposase_20	0.88
PF12802	MarR_2	0.88
PF00488	MutS_V	0.88
PF13412	HTH_24	0.88
PF00480	ROK	0.88
PF01042	Ribonuc_L-PSP	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG1925	HPr or related phosphotransfer protein	Signal transduction mechanisms [T]	61.40
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.75
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	0.88
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.88
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.88
COG1193	dsDNA-specific endonuclease/ATPase MutS2	Replication, recombination and repair [L]	0.88
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.88
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.88
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
All Organisms	root	All Organisms	36.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
cellular organisms	root	All Organisms → cellular organisms	36.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.51 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.51 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.51 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.51 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.88 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.51 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.88 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.51 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.88 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.51 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.88 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17334651	All Organisms → cellular organisms → Bacteria → Proteobacteria	7518	Open in IMG/M
2228664022\|INPgaii200_c1059297	Not Available	1171	Open in IMG/M
2228664022\|INPgaii200_c1061000	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101789784	All Organisms → cellular organisms → Bacteria	4701	Open in IMG/M
3300000955\|JGI1027J12803_100111709	All Organisms → cellular organisms → Bacteria	4384	Open in IMG/M
3300000955\|JGI1027J12803_100237916	Not Available	582	Open in IMG/M
3300001545\|JGI12630J15595_10088074	Not Available	610	Open in IMG/M
3300001593\|JGI12635J15846_10242011	Not Available	1163	Open in IMG/M
3300001661\|JGI12053J15887_10037964	All Organisms → cellular organisms → Bacteria → Proteobacteria	2707	Open in IMG/M
3300001867\|JGI12627J18819_10160959	Not Available	912	Open in IMG/M
3300001867\|JGI12627J18819_10273814	Not Available	679	Open in IMG/M
3300002906\|JGI25614J43888_10011619	All Organisms → cellular organisms → Bacteria → Proteobacteria	2844	Open in IMG/M
3300002917\|JGI25616J43925_10003055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	6976	Open in IMG/M
3300002917\|JGI25616J43925_10079743	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300004092\|Ga0062389_103467756	Not Available	591	Open in IMG/M
3300005332\|Ga0066388_100204779	Not Available	2596	Open in IMG/M
3300005332\|Ga0066388_105289350	Not Available	655	Open in IMG/M
3300005537\|Ga0070730_10832691	Not Available	580	Open in IMG/M
3300005602\|Ga0070762_10379039	Not Available	907	Open in IMG/M
3300005610\|Ga0070763_10100440	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300006173\|Ga0070716_100286212	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300006893\|Ga0073928_10000129	All Organisms → cellular organisms → Bacteria	173248	Open in IMG/M
3300006893\|Ga0073928_10000691	All Organisms → cellular organisms → Bacteria	74245	Open in IMG/M
3300006893\|Ga0073928_10000998	All Organisms → cellular organisms → Bacteria	57747	Open in IMG/M
3300006954\|Ga0079219_10348439	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300007258\|Ga0099793_10253337	Not Available	850	Open in IMG/M
3300007788\|Ga0099795_10140447	Not Available	982	Open in IMG/M
3300010048\|Ga0126373_10014534	All Organisms → cellular organisms → Bacteria	6490	Open in IMG/M
3300010048\|Ga0126373_10058750	Not Available	3442	Open in IMG/M
3300010048\|Ga0126373_13210193	Not Available	509	Open in IMG/M
3300010361\|Ga0126378_10141109	Not Available	2441	Open in IMG/M
3300010366\|Ga0126379_10663786	Not Available	1134	Open in IMG/M
3300010376\|Ga0126381_101776252	Not Available	890	Open in IMG/M
3300011120\|Ga0150983_13596438	Not Available	573	Open in IMG/M
3300011411\|Ga0153933_1005331	All Organisms → cellular organisms → Bacteria	3425	Open in IMG/M
3300012177\|Ga0153943_1031642	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300012180\|Ga0153974_1062806	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300012181\|Ga0153922_1084269	Not Available	716	Open in IMG/M
3300012202\|Ga0137363_11222320	Not Available	638	Open in IMG/M
3300012210\|Ga0137378_11441010	Not Available	601	Open in IMG/M
3300012362\|Ga0137361_11549881	Not Available	584	Open in IMG/M
3300012918\|Ga0137396_10319914	Not Available	1148	Open in IMG/M
3300012918\|Ga0137396_10950349	Not Available	626	Open in IMG/M
3300012918\|Ga0137396_11200598	Not Available	535	Open in IMG/M
3300012925\|Ga0137419_10338579	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300016270\|Ga0182036_10042238	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2808	Open in IMG/M
3300016341\|Ga0182035_10046793	Not Available	2909	Open in IMG/M
3300017970\|Ga0187783_10104306	All Organisms → cellular organisms → Bacteria	2090	Open in IMG/M
3300020140\|Ga0179590_1154624	Not Available	627	Open in IMG/M
3300020199\|Ga0179592_10011036	All Organisms → cellular organisms → Bacteria	3912	Open in IMG/M
3300020582\|Ga0210395_10935187	Not Available	643	Open in IMG/M
3300021088\|Ga0210404_10658053	Not Available	597	Open in IMG/M
3300021168\|Ga0210406_10141281	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300021171\|Ga0210405_10586664	Not Available	869	Open in IMG/M
3300021361\|Ga0213872_10240479	Not Available	765	Open in IMG/M
3300021372\|Ga0213877_10143684	Not Available	750	Open in IMG/M
3300021372\|Ga0213877_10246116	Not Available	593	Open in IMG/M
3300021372\|Ga0213877_10324504	Not Available	526	Open in IMG/M
3300021374\|Ga0213881_10277004	Not Available	747	Open in IMG/M
3300021377\|Ga0213874_10056552	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300021384\|Ga0213876_10007932	All Organisms → cellular organisms → Bacteria	5762	Open in IMG/M
3300021439\|Ga0213879_10019861	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300021444\|Ga0213878_10152301	Not Available	960	Open in IMG/M
3300021444\|Ga0213878_10155665	Not Available	949	Open in IMG/M
3300021477\|Ga0210398_11160970	Not Available	611	Open in IMG/M
3300021559\|Ga0210409_10172362	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300021560\|Ga0126371_10857863	Not Available	1053	Open in IMG/M
3300021560\|Ga0126371_11139872	Not Available	918	Open in IMG/M
3300022557\|Ga0212123_10000369	All Organisms → cellular organisms → Bacteria	151985	Open in IMG/M
3300025910\|Ga0207684_11718348	Not Available	505	Open in IMG/M
3300026304\|Ga0209240_1280065	Not Available	514	Open in IMG/M
3300026319\|Ga0209647_1009814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6509	Open in IMG/M
3300026355\|Ga0257149_1056436	Not Available	570	Open in IMG/M
3300026498\|Ga0257156_1020540	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300027034\|Ga0209730_1023255	Not Available	676	Open in IMG/M
3300027326\|Ga0209731_1083237	Not Available	502	Open in IMG/M
3300027371\|Ga0209418_1009859	Not Available	1480	Open in IMG/M
3300027376\|Ga0209004_1016838	All Organisms → cellular organisms → Bacteria → Proteobacteria	1137	Open in IMG/M
3300027537\|Ga0209419_1015381	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300027548\|Ga0209523_1077783	Not Available	685	Open in IMG/M
3300027609\|Ga0209221_1042531	Not Available	1208	Open in IMG/M
3300027643\|Ga0209076_1144592	Not Available	667	Open in IMG/M
3300027692\|Ga0209530_1139861	Not Available	679	Open in IMG/M
3300027738\|Ga0208989_10080329	Not Available	1116	Open in IMG/M
3300027855\|Ga0209693_10085020	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300027884\|Ga0209275_10699016	Not Available	584	Open in IMG/M
3300027895\|Ga0209624_10397103	Not Available	919	Open in IMG/M
3300027908\|Ga0209006_10595316	Not Available	914	Open in IMG/M
3300028047\|Ga0209526_10499924	Not Available	793	Open in IMG/M
3300031057\|Ga0170834_108535996	Not Available	741	Open in IMG/M
3300031057\|Ga0170834_109727162	Not Available	639	Open in IMG/M
3300031122\|Ga0170822_13345101	Not Available	511	Open in IMG/M
3300031128\|Ga0170823_12967448	Not Available	567	Open in IMG/M
3300031715\|Ga0307476_10045287	Not Available	2981	Open in IMG/M
3300031715\|Ga0307476_10076740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2326	Open in IMG/M
3300031718\|Ga0307474_10365150	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300031718\|Ga0307474_10685926	Not Available	809	Open in IMG/M
3300031753\|Ga0307477_10031864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3610	Open in IMG/M
3300031754\|Ga0307475_10273956	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300031754\|Ga0307475_10969222	Not Available	669	Open in IMG/M
3300031768\|Ga0318509_10602782	Not Available	612	Open in IMG/M
3300031823\|Ga0307478_10165414	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1763	Open in IMG/M
3300031823\|Ga0307478_10196950	Not Available	1619	Open in IMG/M
3300031954\|Ga0306926_10503086	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300031962\|Ga0307479_10686029	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300032001\|Ga0306922_11111758	Not Available	809	Open in IMG/M
3300032001\|Ga0306922_12179593	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300032076\|Ga0306924_10965584	Not Available	938	Open in IMG/M
3300032094\|Ga0318540_10056325	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1776	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.23%
Host-Associated	Host-Associated	8.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.84%
Plants	Host-Associated → Plants	5.26%
Aquatic	Environmental → Aquatic	4.39%
Fungi	Host-Associated → Fungi	3.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.96%
Roots	Host-Associated → Plants → Roots	4.39%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.51%
Mycelium	Host-Associated → Fungi → Mycelium	3.51%
Freshwater	Environmental → Aquatic → Freshwater	0.88%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.28%
Loam	Environmental → Terrestrial → Soil → Loam	22.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.51%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	3.51%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.63%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.88%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.53%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.51%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.75%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.02%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.26%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.51%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	3.51%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.88%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03079230	2088090014	Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKGDDDRDRFLELCCENPHVLKIEEISEEEFTAAPSHTI
INPgaii200_10592971	2228664022	Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRDASTQLILVELKGDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHT
INPgaii200_10610001	2228664022	Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRDASTQLILVELKGDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHTI
INPhiseqgaiiFebDRAFT_1017897843	3300000364	Soil	MHRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILLELKTDADRDRFLELCCENPHVLKIEEISEDEFTAAPSHTI*
JGI1027J12803_1001117094	3300000955	Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKGDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHTI*
JGI1027J12803_1002379162	3300000955	Soil	RFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKGDDDRDRFLELCCENPHVLKIEEISEEEFTAAPSHTI*
JGI12630J15595_100880741	3300001545	Forest Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEXSEDEFTAAPSHAI*
JGI12635J15846_102420113	3300001593	Forest Soil	MVRPQRAEIFALPTLRLQIATITRFIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
JGI12053J15887_100379643	3300001661	Forest Soil	MVKYCFRITFQTEQAAFYQFHVFPPVEYLSWARGWARKRSGNSQLILIELNSEDYRDRFLQLCCENPHVLKIEEIHEEDFTNAPSHEV*
JGI12627J18819_101609591	3300001867	Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASSQLILVELQEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
JGI12627J18819_102738141	3300001867	Forest Soil	NRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELQKEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
JGI25614J43888_100116192	3300002906	Grasslands Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASSQLILVELKGDNDRDRFLELCCENPHVLKIEEISEDEFTASPSHTI*
JGI25615J43890_11019171	3300002910	Grasslands Soil	PHAPDXXXXXSFXAXRYELFAFXNAXSTYIRMNRFCFRITXQNEDAAXYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
JGI25616J43925_100030557	3300002917	Grasslands Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTETPSQAI*
JGI25616J43925_100797431	3300002917	Grasslands Soil	CFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASSQLILVELKGDNDRDRFLELCCENPHVLKIEEISEDEFTASPSHTI*
Ga0062389_1034677562	3300004092	Bog Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVLHIPWVSGWARKRNASTQLILVELQEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0066388_1002047793	3300005332	Tropical Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0066388_1052893502	3300005332	Tropical Forest Soil	MFRYCFRITFQTEEAAFYQFHVFPPVSHLSWILGWARKRNGRSQLVLLELKSEEFRDRFLELCCENPHVLKIQEIDEEDFTNAESHDV*
Ga0070730_108326911	3300005537	Surface Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELQKEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0070762_103790392	3300005602	Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0070763_101004403	3300005610	Soil	PSFFADRYELVAFRNAASTYIRMNRFCFRITFQSEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0075363_1000112032	3300006048	Populus Endosphere	MVKYCFRIIFQTEQAAFYQFHVFPPMNHLLWTSGWARKRHGNSQLILIELKSEEYRNRFLQLCCENPHVLRIEEINEEDFTNSPSHEV*
Ga0070716_1002862123	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASSQLILVELTGDNDRDRFLELCCENPHVLKIEEISEDEFTASPSHTI*
Ga0075366_100353414	3300006195	Populus Endosphere	MVKYCFRIIFQTEQAAFYQFHIFPPMNHLLWTSGWARKRHGNSQPILIELKSEEYRDRFLQLCCENPHVLRIEEINEEDFTNSPSHEV*
Ga0075366_101624522	3300006195	Populus Endosphere	MVKYCFRIIFQTEQAAFYQFHVFPPMNHLLWTSGWARKRHGNSQLILIELTSEEYRDRFLQLCCENPHVLRIEEINEEDFTNSPSHEV*
Ga0073928_100001298	3300006893	Iron-Sulfur Acid Spring	MRMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELTEEDDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0073928_1000069145	3300006893	Iron-Sulfur Acid Spring	MMSRFCFRITFQSEDAAFYQFHVFPPVVHIPWISGWARKRNASTQLILVELQQDEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0073928_100009981	3300006893	Iron-Sulfur Acid Spring	IMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0079219_103484391	3300006954	Agricultural Soil	QRLLRSIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0099793_102533372	3300007258	Vadose Zone Soil	MYRYCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHAI*
Ga0099795_101404473	3300007788	Vadose Zone Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHAI*
Ga0126373_100145345	3300010048	Tropical Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASAQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0126373_100587503	3300010048	Tropical Forest Soil	MVRHCFRITFQNQDAAFYLFHGFPPVVYLPWVLGWARKRNCDTQLVLVELEAPDDRNRFLELCCENPHVLKIEEITEDEFTYAPGQEI*
Ga0126373_132101931	3300010048	Tropical Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKDEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0126378_101411092	3300010361	Tropical Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHISWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0126379_106637862	3300010366	Tropical Forest Soil	MSRYCFRITFQTEEAAFYQFHVFPPVSHLSWILGWARKRNGRSQLVLLELKSEEFRDRFLELCCENPHVLKIQEIDEEDFTNAESHDV*
Ga0126381_1017762522	3300010376	Tropical Forest Soil	MVRHCFRITFQNQDAAFYLFHGFPPVIYLPWVLGWARKRNGDTQLVLVELEAPDDRNRFLELCCENPHVLKIEEITEDEFTYAPGQEI*
Ga0150983_135964381	3300011120	Forest Soil	DRYELVAFRNVASTYIRMNRFCFRITFQNEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0153933_10053314	3300011411	Attine Ant Fungus Gardens	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQSI*
Ga0153943_10316423	3300012177	Attine Ant Fungus Gardens	AAITRFMMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELQEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0153974_10628063	3300012180	Attine Ant Fungus Gardens	FRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHAI*
Ga0153922_10842692	3300012181	Attine Ant Fungus Gardens	MMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELQEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI*
Ga0137363_112223202	3300012202	Vadose Zone Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTDTPSQAI*
Ga0137378_114410102	3300012210	Vadose Zone Soil	RFYYGAMYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHAI*
Ga0137361_115498811	3300012362	Vadose Zone Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFAAAPSHAI*
Ga0137396_103199142	3300012918	Vadose Zone Soil	MYRFCFRITFQNEEAAFYEFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHAI*
Ga0137396_109503491	3300012918	Vadose Zone Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDE
Ga0137396_112005982	3300012918	Vadose Zone Soil	MYRYCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASSQLILVELKGDNDRDRFLELCCENPHVLKIEEISEDEFTASPSHTI*
Ga0137419_103385793	3300012925	Vadose Zone Soil	CFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHAI*
Ga0182036_100422382	3300016270	Soil	MVRHCFRITFQNQNAAFYLFHGFPPVVYLPWVLGWARKRNGDTQLVLVELEAPDDRNRFLELCCENPHVLKIEEITEDEFTYAPGQEI
Ga0182035_100467931	3300016341	Soil	MVRHCFRITFQNQDAAFYLFHGFPPVVYLPWVLGWARKRNGDTQLVLVELEAADDRKRFLELCCENPHVLKIEEITEEEFTYAPGQEI
Ga0187783_101043063	3300017970	Tropical Peatland	MRRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKQEEDRDRFLEICCENPHVLKIEEISEEEFTATPSHTI
Ga0179590_11546242	3300020140	Vadose Zone Soil	FRNATSTYIRMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEDDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0179592_100110363	3300020199	Vadose Zone Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRDASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHAI
Ga0210395_109351871	3300020582	Soil	THCVSRIQRLLRSIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0210404_106580531	3300021088	Soil	DRYELVAFRNAASTYIRMNRFCFRITFQSEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0210406_101412811	3300021168	Soil	MRMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELTEEDDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0210405_105866641	3300021171	Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTETPSQAI
Ga0213872_102404792	3300021361	Rhizosphere	VSRFSFRITFQNEDAAFYQFHVFPPVIHLPWITGWARKRSGNAQFILVELEGDDDRDRFLEVCCDNPHVLKIEEISEDEFTEAPSEAI
Ga0213877_101436842	3300021372	Bulk Soil	MSRFCFRITFQNEDAAFYQFHVFPPVVHIPWISGWARKRNASTQLILVELQQDEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0213877_102461162	3300021372	Bulk Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELQEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0213877_103245041	3300021372	Bulk Soil	MCRYCFRITFQTEEAAFYQFHVFPPVSHLKWIVGWARKRNGKSQLVLLELKSDEFRDRFLELCCENPHVLKIQEI
Ga0213881_102770042	3300021374	Exposed Rock	MFRHCFRITFQNEEAAFYQFHVFPPVVYLPWVQGWARKRDTSTQLVLVELAGQGDRDRFLELCCENPHVLKIEEISEDEFTYAP
Ga0213874_100565523	3300021377	Plant Roots	MSRFCFRITFQNEDAAFYQFHVFPPVFHIPWISGWARKRNASTQLILVELQQDADRDRFLEICCENPHVLKIEEISEEEFTATPSQAI
Ga0213876_100079325	3300021384	Plant Roots	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLVLVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0213879_100198611	3300021439	Bulk Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKDEEDRDRFLELCCENPHVLKIEEIS
Ga0213878_101523013	3300021444	Bulk Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWASGWARKRNASTQLILVELQEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0213878_101556651	3300021444	Bulk Soil	VSRFSFRITFQNEDAAFYQFHVFPPVIHLPWITGWARKRSGNAQFILVELEGDDDRDRFLEVCCDNPHVLKIEEISEDE
Ga0210398_111609702	3300021477	Soil	SRIQRLLRSIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0210409_101723623	3300021559	Soil	MNRFCFRITFQSEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0126371_108578631	3300021560	Tropical Forest Soil	MVRHCFRITFQNQDAAFYLFHGFPPVVYLPWVLGWARKRNGDTQLVLVELEAPDDRNRFLELCCENPHVLKIEEITEDEFTYAPGQEI
Ga0126371_111398721	3300021560	Tropical Forest Soil	GDEIGLRPLEFGPTTRTLCVSRMLRLLRSIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0212123_1000036993	3300022557	Iron-Sulfur Acid Spring	MMSRFCFRITFQSEDAAFYQFHVFPPVVHIPWISGWARKRNASTQLILVELQQDEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0179589_103257742	3300024288	Vadose Zone Soil	GPPPSRVFAPSSFFSDRYELVAFRNATSTYIRMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEDDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0207684_117183482	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AFYQFHVFPPVVYLPWVSGWARKRNASSQLILVELKGDNDRDRFLELCCENPHVLKIEEISEDEFTASPSHTI
Ga0209240_12800651	3300026304	Grasslands Soil	FRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASSQLILVELKGDNDRDRFLELCCENPHVLKIEEISEDEFTASPSHTI
Ga0209647_10098148	3300026319	Grasslands Soil	YELFAFTNATSTYIRMNRFCFRITFQNEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTETPSQAI
Ga0257149_10564361	3300026355	Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHAI
Ga0257156_10205401	3300026498	Soil	TSPLRLRPRRFYYRSMYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASSQLILVELKGDNDRDRFLELCCENPHVLKIEEISEDEFTASPSHTI
Ga0209730_10232551	3300027034	Forest Soil	SIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEDDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0209731_10832371	3300027326	Forest Soil	IQRLLRSIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0209418_10098592	3300027371	Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELQKEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0209004_10168382	3300027376	Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASSQLILVELQEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0209419_10153811	3300027537	Forest Soil	YGAMYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHAI
Ga0209523_10777831	3300027548	Forest Soil	PRLLRSIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0209221_10425312	3300027609	Forest Soil	MVRPQRAEIFALPTLRLQIATITRFIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0209076_11445922	3300027643	Vadose Zone Soil	MYRFCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFT
Ga0209530_11398612	3300027692	Forest Soil	FEMVRPQRAEIFALPTLRLQIATITRFIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0208989_100803292	3300027738	Forest Soil	MYRYCFRITFQNEEAAFYQFHVFPPVVYLPWVSGWARKRNASTQLILVELKDDDDRDRFLELCCENPHVLKIEEISEDEFTAAPSHAI
Ga0209693_100850203	3300027855	Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0209275_106990161	3300027884	Soil	MVRPQRAEIFALPTLRLQIATITRFIMNRFCFRITFQNEEAAFYQFHVFPPVVHIPWVSGWARKRNASAQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0209624_103971031	3300027895	Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASAQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0209006_105953163	3300027908	Forest Soil	NEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKVEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0209526_104999241	3300028047	Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEF
Ga0170834_1085359961	3300031057	Forest Soil	DRYELVAFRNATSTYIRMNRFCFRITFQNEDAAFYQFHVFPPVVHMPWVYGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0170834_1097271622	3300031057	Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELTEEDDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0170822_133451011	3300031122	Forest Soil	AAFYQFHVFPPVVHMPWVYGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0170823_129674482	3300031128	Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHMPWVSGWARKRNASTQLILVELTEEDDRDRFLELCCENPHVLKIEEISEDEFTAT
Ga0307476_100452872	3300031715	Hardwood Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASAQLILVELQEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0307476_100767403	3300031715	Hardwood Forest Soil	RFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASAQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0307474_103651503	3300031718	Hardwood Forest Soil	NEDAAFYQFHVFPPVVHIPWVSGWARKRNASAQLILVELQEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0307474_106859262	3300031718	Hardwood Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKQEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0307477_100318641	3300031753	Hardwood Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASAQLILVELKEEDDRDRFLELCCENPHVLKIE
Ga0307475_102739561	3300031754	Hardwood Forest Soil	DRYELFAFTNATSTYIRMNRFCFRITFQNEDAAFYQFYVFPPVVHIPWVSGWARKRNASAQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0307475_109692221	3300031754	Hardwood Forest Soil	LPVERTHCVPRIQRLLRSIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0318509_106027821	3300031768	Soil	MVRHCFRITFQNQDAAFYLFHGFPPVVYLPWVLGWARKRNGDTQLVLVELEAPDDRDRFLELCCENPHVLKIEEI
Ga0307478_101654141	3300031823	Hardwood Forest Soil	LRNPTITRFIMNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASAQLILVELKEEEDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0307478_101969502	3300031823	Hardwood Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASAQLILVELQEEEDRDRFLELCCENPHVLKIEEISEDEFTATP
Ga0306926_105030862	3300031954	Soil	VSRFSFRITFQNEDAAFYQFHVFPPVIHLPWITGWARKRSGNAQFILVELEGDDRDRFLEVCCDNPHVLKIEEISEDEFTEAPSEAI
Ga0307479_106860292	3300031962	Hardwood Forest Soil	MNRFCFRITFQNEDAAFYQFHVFPPVVHIPWVSGWARKRNASTQLILVELTEEDDRDRFLELCCENPHVLKIEEISEDEFTATPSQAI
Ga0306922_111117582	3300032001	Soil	MVRHCFRITFQNQNAAFYLFHGFPPVVYLPWVLGWARKRNGDTQLVLVELEAPDDRDRFLELCCENPHVLKIEEITEDEFTYAPSQEI
Ga0306922_121795931	3300032001	Soil	TFQNEDAAFYQFHVFPPVIHLPWITGWARKRSGNAQFILVELEGDDRDRFLEVCCDNPHVLKIEEISEDEFTEAPSEAI
Ga0306924_109655841	3300032076	Soil	MVRHCFRITFQNQDAAFYLFHGFPPVVYLPWVLGWARKRNGDTQLVLVELEAPDDRDRFLELCCENPHVLKIEEITEDEFTYAPSQEI
Ga0318540_100563251	3300032094	Soil	AAFYLFHGFPPVVYLPWVLGWARKRNGDTQLVLVELEAPDDRNRFLELCCENPHVLKIEEITEDEFTYAPGQEI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081689

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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