NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F081712

Metagenome Family F081712

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F081712
Family Type Metagenome
Number of Sequences 114
Average Sequence Length 42 residues
Representative Sequence MSAVLLAVFGQYGDAERVRTKLVSDGFPTDRVELTASAEPGR
Number of Associated Samples 108
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(28.947 % of family members)
Environment Ontology (ENVO) Unclassified
(27.193 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(35.965 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.57%    β-sheet: 2.86%    Coil/Unstructured: 78.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF00196GerE 18.42
PF00903Glyoxalase 14.04
PF14238DUF4340 8.77
PF00593TonB_dep_Rec 4.39
PF12681Glyoxalase_2 3.51
PF07726AAA_3 2.63
PF08002DUF1697 2.63
PF10003DUF2244 1.75
PF13531SBP_bac_11 0.88
PF00149Metallophos 0.88
PF00075RNase_H 0.88
PF08857ParBc_2 0.88
PF07715Plug 0.88
PF05960DUF885 0.88
PF00221Lyase_aromatic 0.88
PF13283NfrA_C 0.88
PF00144Beta-lactamase 0.88
PF12679ABC2_membrane_2 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG3797Uncharacterized conserved protein, DUF1697 familyFunction unknown [S] 2.63
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.88
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.88
COG2367Beta-lactamase class ADefense mechanisms [V] 0.88
COG2986Histidine ammonia-lyaseAmino acid transport and metabolism [E] 0.88
COG4318Uncharacterized conserved proteinFunction unknown [S] 0.88
COG4805Uncharacterized conserved protein, DUF885 familyFunction unknown [S] 0.88


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil28.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.26%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.26%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.51%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.51%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.51%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.63%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.63%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.63%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.63%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.63%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.75%
CompostEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Compost0.88%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.88%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.88%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.88%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.88%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.88%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.88%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014322Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020593Enriched Miracle-Growth compost microbial communities from Emeryville, California, USA - eDNA 5th pass 37_C Kraft MG (version 2)EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300027330Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)EnvironmentalOpen in IMG/M
3300027502Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027706Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027965Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_089456722228664022SoilMSAVLLAVFGQYGDAERVRTQLVRDGFPTDRVELTSATEPGRAGVHP
JGI12635J15846_1037216213300001593Forest SoilMSAVLLAVFNEYGVADRVRTRLVGDGFPTDRVELTASCEP
JGI12053J15887_1004274833300001661Forest SoilMSAILLAVFNDYEAADRMRVMLVRDGFPTDRVHLTASC
Ga0066684_1052813013300005179SoilMSAVLLAVFNEYDVADRVRTKLVGDGFPTDRVELTASCEPGRAGLH
Ga0070683_10073858213300005329Corn RhizosphereMSAVLLAVFNDYETADRVRLELVRDGFPTDRVELTAACEPGRA
Ga0070705_10009333613300005440Corn, Switchgrass And Miscanthus RhizosphereMSAVLLAVFGKFSEAEKVRTELVRDGFPTDRVELTARHEQ
Ga0070731_1099449823300005538Surface SoilMSAILLAVFEGHPVAERVRVSLVRDGFPTDRVELTARCE
Ga0066707_1023012333300005556SoilMSAVLLAVFNEYDVADRVRTKLVGDGFPTDRVELTA
Ga0066699_1094048513300005561SoilMSAVLLAVFNDYEAAQRVRVELVRDGFPTDRVELTAGCEPGRAG
Ga0068857_10129084013300005577Corn RhizosphereMSAVLLAVFNEYENAQGVRLELVRDGFPTDRVELTAACEPG
Ga0068866_1013959133300005718Miscanthus RhizosphereMSAVLLAVFGKFSEAEKVRTELVRDGFPTDRVELTARHEQGR
Ga0066903_10467370623300005764Tropical Forest SoilMSAVILAVFNEYAAADRVRTRLVSDGFPTDRVELTAACEPG
Ga0068858_10016837013300005842Switchgrass RhizosphereMSAVLLAVFDRFGDAQRVRTRLVRDGFPTDRVELTAREECGRAGLQPATSV
Ga0066651_1042490213300006031SoilMSAVLLAVFDEYGVAERVRTRLVRDGFPTDRVELTASCEPGRA
Ga0075017_10144443913300006059WatershedsMSAVLLAVFSRFSDAQRVRTLLVSDGFPTDRVELTSC
Ga0075018_1052272213300006172WatershedsMSAILLAVFTDYADAERVRTQLVHDGFPTDRVELTAI
Ga0070716_10184526813300006173Corn, Switchgrass And Miscanthus RhizosphereMSAVLLAVFNRFADAERARTRLVRDGFPTDRVELTARAEPGRAGEQPGSAR
Ga0070712_10075091013300006175Corn, Switchgrass And Miscanthus RhizosphereMSAVLLAVFGQYGDAERVRTQLVRDGFPTDRVELTSATEPGRAGVHPADSRRARF
Ga0066653_1038031523300006791SoilMSAVLLAVFNDYEAAERVRVMLVLDGFPTDRVELTASC
Ga0075424_10015160413300006904Populus RhizosphereMSAVLLAVFGNSGDAERVRTTLVSDGFPTDRVELT
Ga0105240_1003470213300009093Corn RhizosphereMSAVLLAVFNDYETADRVRVELVRDGFPTDRVELT
Ga0105241_1024623733300009174Corn RhizosphereMSAVLLAVFDRFGDAQRVRTRLVRDGFPTDRVELTAREESGRAGLQ
Ga0105248_1014625433300009177Switchgrass RhizosphereMSAVLLAVFDRFGDAQRVRTRLVRDGFPTDRVELTAREE
Ga0105237_1261570623300009545Corn RhizosphereMSAVLLAVFNDYDAAERVRIDLFRDGFPTDRVELTACCEPGRAGCE
Ga0105249_1157457823300009553Switchgrass RhizosphereMSAVLLAVFGKFSEAEKVRTELVRDGFPTDRVELT
Ga0126373_1274480723300010048Tropical Forest SoilMSAVLLAVFNDYEAADRVRVQLVRDGFPTDRVELTASCEPGRAGLQ
Ga0134082_1032281913300010303Grasslands SoilMSAVLLAVFNEYGVADRVRTRLVGDGFPTDRVELTASCEPGRA
Ga0126381_10122498513300010376Tropical Forest SoilMDMSAVLLAVFNDLGSADRVRTRLVSDGFPTDRVELTSAAEPGRAG
Ga0137389_1102261413300012096Vadose Zone SoilMSAVLLAVFNEYGVADRVRTKLVGDGFPTDRVELTASC
Ga0150985_11626621113300012212Avena Fatua RhizosphereMSAVLLAVFNDYESAQRTRLELVRDGFPTDRVELTAACEPGRAACF
Ga0134110_1036126913300012975Grasslands SoilMSAVLLAVFNEYGVADRVRTRLVGDGFPTDRVELT
Ga0157374_1123065813300013296Miscanthus RhizosphereMSAVLLAVFGKFSEAEKVRTELVRDGFPTDRVELTA
Ga0134081_1026563413300014150Grasslands SoilMSAVLLAVFNDYETAERVRVILVRDGFPTDRVELTASCELGRAGFE
Ga0075355_108438613300014322Natural And Restored WetlandsMSAVLLAVFTDYSDAERVRTQLVHDGFPTDRVELT
Ga0132257_10295639033300015373Arabidopsis RhizosphereMSAVLLAVFDRFGDAQRVRTRLVRDGFPTDRVELTA
Ga0182041_1049380923300016294SoilMSAVLLAVFGEYGDAERVRTQLVRDGFPTDRVELT
Ga0182040_1073530323300016387SoilMSAVLLAVFGEYGDAERVRTQLVRDGFPTDRVELTSAT
Ga0187778_1130094823300017961Tropical PeatlandMSAVILAVFNEYSAADRVRTRLVSDGFPTDRVELT
Ga0187783_1085609613300017970Tropical PeatlandMSAVLLAVFNQYEIADRVRTRLVRDGFPTDRVELTASVEPGRAGLHPAGTTRAKF
Ga0187781_1142831313300017972Tropical PeatlandMSAVLLAVFNEYGAADRVRTRLVSDGFPTDRVELTACCEP
Ga0066669_1039154213300018482Grasslands SoilMSAVLLAVFNEYGVADRVRTRLVGDGFPTDRVELTA
Ga0179594_1036610213300020170Vadose Zone SoilMSAVLLAVFNDYETAERVRVLLVRDGFPTDRVELTASCELGRAAF
Ga0180221_109815513300020593CompostMSAVLLAVFDDYDAADRVRSALVRDGFPTDRVDLTASREPG
Ga0179596_1031007323300021086Vadose Zone SoilMSAVILAVFNDYEAAERVRVMLVRDGFPTDRVELTASCELGRAGCE
Ga0210400_1083383523300021170SoilMSAVLLAVFNDYEAADRVRVELVRDGFPTDRVELTAACE
Ga0210405_1093266113300021171SoilMSAVILAVFSEYGDAERVRTELVSDGFPTDRVELTAASEPGRAGSL
Ga0213876_1046456523300021384Plant RootsMSAVLLAVFNDFGTADQVRTRLVRDGFPTDRVELTARGEPGRAGLQPG
Ga0210394_1049637433300021420SoilMSAVLLAVFKEYGDADRVRTRLVGDGFPTDRVELTESHR
Ga0210384_1109609513300021432SoilMSAVLLAVFNEYGVADRVRTRLVGDGFPTDRVELTASC
Ga0210409_1135843223300021559SoilMSAVLLAVFNRFADAERARTRLVRDGFPTDRVELTARAEPGRAGETPGSAR
Ga0126371_1389786813300021560Tropical Forest SoilMSAVLLAVFGQYRDAERVRTKLVSDGFPTDRVELTSS
Ga0247670_101115233300024283SoilMSAVLLAVFGQYGDAERVRTQLVRDGFPTDRVELTSATEP
Ga0137417_145114663300024330Vadose Zone SoilMSAVLLAVFNDYETADRMRVTLVKDGFPTDRVHLTASAIWAVRA
Ga0207692_1047230213300025898Corn, Switchgrass And Miscanthus RhizosphereMSAVLLAVFGKFSEAEKVRTELVRDGFPTDRVELTARHEQG
Ga0207710_1007433313300025900Switchgrass RhizosphereMSAVLLAVFDRFGDAQRVRTRLVRDGFPTDRVELTAREECGRAGLQ
Ga0207654_1049473713300025911Corn RhizosphereMSAVLLAVFDRFGDAQRVRTRLVRDGFPTDRVELTAREESG
Ga0207695_1004787113300025913Corn RhizosphereMSAVLLAVFNDYETADRVRVELVRDGFPTDRVELTA
Ga0207671_1052106323300025914Corn RhizosphereMSAVILAVFNDFETADRVRTSLVRDGFPTDRVELTAS
Ga0207693_1002016333300025915Corn, Switchgrass And Miscanthus RhizosphereMSAVLLAVFGQYGDAERVRTQLVRDGFPTDRVELTSATEPGRGLW
Ga0207663_1015417523300025916Corn, Switchgrass And Miscanthus RhizosphereMSAVLLAVYTSHEAAERARTDLVRDGFPTDRVELTDC
Ga0207660_1017805643300025917Corn RhizosphereMSAVLLAVFTEYGAADRVRTRLVSDGFPTDRVELTAVAEPGR
Ga0207690_1170065113300025932Corn RhizosphereMSAVLLAVFNEYENAQGVRLELVRDGFPTDRVELTAACEPGRAACFPAEE
Ga0207711_1040831433300025941Switchgrass RhizosphereMSAVLLAVFDRFGDAQRVRTRLVRDGFPTDRVELTAREESGRAGLQPATS
Ga0207661_1191651223300025944Corn RhizosphereMSAVLLAVFNDYETADRVRLELVRDGFPTDRVELTAACEPG
Ga0209158_110664423300026333SoilMSAVLLAVFNDYEAAERVRVALVRDGFPTDRVELTACCEPGR
Ga0207777_109440013300027330Tropical Forest SoilMSAVLLAVFGQYGDAERVRTKLVSDGFPTDRVELTASAEPGR
Ga0209622_104642013300027502Forest SoilMSAVILAVFDEFSAAERVRTRLVSDGFPTDRVELTASCEPGRAG
Ga0209420_108285113300027648Forest SoilMSAVILAVFSEYGAADRVRTRLVSDGFPTDRVELTAASEPG
Ga0209581_115924323300027706Surface SoilMSAVLLAVFSDFETAERARLALFRDGFPTDRVELTAQHEPGRAVAASEPGRS
Ga0209689_111725313300027748SoilMSAVLLAVFNEYGVADRVRTRLVGDGFPTDRVELTASCEPGRAG
Ga0209689_131929213300027748SoilMSAVLLAVFNDYEAAERVRVALVRDGFPTDRVELTACCEPGRAG
Ga0209274_1018437313300027853SoilMSAVLLAVFNDYPTADRVRTRLVSDGFPTDRVNLTASA
Ga0209488_1003723313300027903Vadose Zone SoilMSAVLLAVFDEYQVAERVRVELVRHGFPTDRIELTAGCEPGRAG
Ga0209062_105036833300027965Surface SoilMSAVLLAVFSDFETAERARLALFRDGFPTDRVELTAQHEP
Ga0318541_1032443823300031545SoilMSAVLLAVFGQYGDAERVRTKLVSDGFPTDRVELTSSTEPGRAGL
Ga0318538_1032539413300031546SoilMSAVLLAVFGQHGDAERVRTRLVRDGFPTDRVELTSSAEPGRAGLH
Ga0318571_1025538013300031549SoilMSAVLLAVFGQYGDAERVRTKLVSDGFPTDRVELTS
Ga0318555_1079612923300031640SoilMSAVILAVFGQYGDADRVRTKLVSDGFPTDRVELTSATEP
Ga0318561_1033990423300031679SoilMSAVLLAVFGNPADAERVRTRLVRDGFPTDRVELTSQHE
Ga0318561_1046833013300031679SoilMSAVLLAVFGQYRDAERVRIKLVSDGFPTDRVELTSS
Ga0310686_11744931013300031708SoilMSAVLLAVFNDYDAADRVRTELVRDGFPTDRVEVT
Ga0318492_1022939923300031748SoilMSAVLLAVFGQYGDAERVRTKLVSDGFPTDRVELTSSTEPGRAGIHPAGSR
Ga0307477_1031668913300031753Hardwood Forest SoilMSAILLAVFDDHPVAERVRVSLVRDGFPTDRVELTASCEPGRAGLGP
Ga0307475_1077256723300031754Hardwood Forest SoilMSAVLLAVFDEYDVADRVRTKLVGDGFPTDRVELTAACE
Ga0318535_1024449423300031764SoilMSAVLLAVFGQHGDAERVRTRLVRDGFPTDRVELTSSAEPGRAGLHPAG
Ga0318535_1030335423300031764SoilMSAVILAVFGQYGDADRVRTKLVTDGFPTDRVELTSATEPGRAGVHPAR
Ga0318543_1026385223300031777SoilMSAVLLAVFGQHGDAERVRTRLVSDGFPTDRVELTSSAEPGRAGRHP
Ga0318547_1049930813300031781SoilMSAVLLAVFGQHGDAERVRTKLVADGFPTDRVELTAADEPGRAGLHP
Ga0318576_1043569823300031796SoilMSAVLLAVFGQYRDAERVRIKLVSDGFPTDRVELTSSAEPGRAGLHPA
Ga0318523_1009721313300031798SoilMSAVLLAVFGEYGDAERVRTQLVRDGFPTDRVELTSATEPGRAG
Ga0318567_1029373313300031821SoilMSAVLLAVFGQYRDAERVRIKLVSDGFPTDRVELTSSAEPGRAGLHPAG
Ga0307478_1055006513300031823Hardwood Forest SoilMSAVLLAVFDEYDVADRVRTKLVGDGFPTDRVELTAAC
Ga0318564_1019667423300031831SoilMSAVLLAVFGQHGDAERVRTKLVADGFPTDRVELTAADEPGRAGLHPAAS
Ga0318495_1003881333300031860SoilMSAVLLAVFGQYGDAERVRIKLVSDGFPTDRVELTA
Ga0318495_1016932023300031860SoilMSAVLLAVFGEYGDAERVRTQLVRDGFPTDRVELTSATEPGRAGVHPAGSR
Ga0306925_1142062513300031890SoilMSAVLLAVFGQYRDAERVRTRLVSDGFPTDRVELTSST
Ga0318520_1064899413300031897SoilMSAVILAVFGQYGDADRVRTKLVSDGFPTDRVELTSATEPGRAGVHPA
Ga0306923_1120045113300031910SoilMSAVLLAVFGQHGDAERVRTRLVRDGFPTDRVELTSSAEPGRARVDPAGSKRA
Ga0310913_1057903513300031945SoilMSAVLLAVFGQYGDAERVRTKLVSDGFPTDRVELTSSTEPGRAGIHPAGSRRAK
Ga0310913_1108319713300031945SoilMSAVLLAVFGQYRDAERVRIKLVSDGFPTDRVELTSSA
Ga0310909_1019278313300031947SoilMSAVLLAVFGEYGDAERVRTQLVRDGFPTDRVELTSATEPGRAGVHPAG
Ga0307479_1082019213300031962Hardwood Forest SoilMRAILLAVFDDHSVAERVRVSLVRAGFPTDRVEQTA
Ga0318569_1007172813300032010SoilMSAVLLAVFGQYGDAERVRIKLVSDGFPTDRVELTAAAEPGRAG
Ga0318532_1011273013300032051SoilMSAVLLAVFGQYGDAERVRIKLVSDGFPTDRVELTAAAEPGRAGLQPADSR
Ga0318532_1029082023300032051SoilMSAVLLAVFGQFRDAERVRTRLVSDGFPTDRVELTSATEPGRAGLH
Ga0318505_1056270023300032060SoilMSAVLLAVFNEYGVADRVRTKLVRDGFPSDRVELTASV
Ga0318525_1032416813300032089SoilMSAVLLAVFGQYRDAERVRIKLVSDGFPTDRVELTS
Ga0318518_1029828733300032090SoilMSAVLLAVFGQYRDAERVRTRLVSDGFPTDRVELTSSTEPGRAG
Ga0307471_10229744013300032180Hardwood Forest SoilMSAVLLAVFNRFADAERVRTRLVRDGFPTDRVELTAR
Ga0307472_10185588523300032205Hardwood Forest SoilMSAVLLAVFSEYGDADRVRTRLVRDGFPTDRVELTAQSDRGRA
Ga0310812_1003575313300032421SoilMSAVLLAVFGQYGDAERVRTKLVSDGFPTDRVELTSQGEPGR
Ga0335080_1231261523300032828SoilMSAVILAVFNEYSAADRVRTRLVSDGFPTDRVELTAS
Ga0335069_1220465423300032893SoilMSAVLLAVFNHYDDAERVRTHLVSDGFPTDRVELTGVREPGRAGE
Ga0335073_1061937123300033134SoilMSAVLLAVFSDFDTAERARLALFRDGFPTDRIELTARGEPGRAGRGA


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