Metagenome Family F082220

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082220
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	61 residues
Representative Sequence	NLFYTITFAIPDAQDYTMTAVAIAAPQTNDNQCAQFTLSSTGQQAAQDNNANNTTKACWGSN
Number of Associated Samples	85
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.23 %
% of genes from short scaffolds (< 2000 bps)	85.84 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.602 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (57.522 % of family members)
Environment Ontology (ENVO)	Unclassified (71.681 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (57.522 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 10.00% Coil/Unstructured: 90.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF16732	ComP_DUS	31.86
PF02554	CstA	22.12
PF13354	Beta-lactamase2	7.08
PF07963	N_methyl	6.19
PF13722	CstA_5TM	6.19
PF13544	Obsolete Pfam Family	2.65
PF13633	Obsolete Pfam Family	2.65
PF04328	Sel_put	2.65

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1966	Carbon starvation protein CstA (peptide/pyruvate transporter)	Energy production and conversion [C]	22.12
COG2879	Uncharacterized short protein YbdD, DUF466 family	Function unknown [S]	2.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
All Organisms	root	All Organisms	35.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
cellular organisms	root	All Organisms → cellular organisms	35.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.51 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.54 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.88 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.77 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.88 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.88 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.77 %
Tolypothrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae	0.88 %
Candidimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas	0.88 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Pseudomonas aeruginosa group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group	0.88 %
unclassified Candidimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas → unclassified Candidimonas	0.88 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.88 %
Tolypothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Tolypothrix campylonemoides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides	0.88 %
Candidimonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas → unclassified Candidimonas → Candidimonas sp.	0.88 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.88 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.88 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	0.88 %
Candidimonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas → unclassified Candidimonas → Candidimonas sp.	0.88 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.88 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	0.88 %
Candidimonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas → unclassified Candidimonas → Candidimonas sp.	0.88 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	0.88 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	0.88 %
Candidimonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas → unclassified Candidimonas → Candidimonas sp.	0.88 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	0.88 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	0.88 %
Candidimonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas → unclassified Candidimonas → Candidimonas sp.	0.88 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	0.88 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	0.88 %
Candidimonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas → unclassified Candidimonas → Candidimonas sp.	0.88 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	0.88 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	0.88 %
Candidimonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas → unclassified Candidimonas → Candidimonas sp.	0.88 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	0.88 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	0.88 %
Candidimonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas → unclassified Candidimonas → Candidimonas sp.	0.88 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.60 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.88 %
Tolypothrix campylonemoides VB511288	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	0.88 %
Candidimonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas → unclassified Candidimonas → Candidimonas sp.	0.88 %
Pseudomonas aeruginosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_105820440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	623	Open in IMG/M
3300005435\|Ga0070714_100545242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1110	Open in IMG/M
3300005764\|Ga0066903_101097529	Not Available	1466	Open in IMG/M
3300005764\|Ga0066903_108656196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas aeruginosa group → Pseudomonas aeruginosa	518	Open in IMG/M
3300006954\|Ga0079219_11093019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	675	Open in IMG/M
3300010048\|Ga0126373_11091688	Not Available	864	Open in IMG/M
3300010048\|Ga0126373_11462671	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300010359\|Ga0126376_10654287	Not Available	1003	Open in IMG/M
3300010360\|Ga0126372_11767652	Not Available	661	Open in IMG/M
3300010360\|Ga0126372_12754015	Not Available	544	Open in IMG/M
3300010361\|Ga0126378_11587200	Not Available	743	Open in IMG/M
3300010361\|Ga0126378_13143754	Not Available	525	Open in IMG/M
3300010366\|Ga0126379_12451750	Not Available	621	Open in IMG/M
3300010376\|Ga0126381_103137802	Not Available	654	Open in IMG/M
3300010398\|Ga0126383_12146747	Not Available	645	Open in IMG/M
3300010398\|Ga0126383_12715880	Not Available	578	Open in IMG/M
3300010401\|Ga0134121_10369506	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300011120\|Ga0150983_12033341	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300012961\|Ga0164302_11661352	Not Available	534	Open in IMG/M
3300012971\|Ga0126369_10335383	Not Available	1528	Open in IMG/M
3300012971\|Ga0126369_12065330	Not Available	658	Open in IMG/M
3300012971\|Ga0126369_13270643	Not Available	531	Open in IMG/M
3300016294\|Ga0182041_11863257	Not Available	558	Open in IMG/M
3300016387\|Ga0182040_10462964	Not Available	1007	Open in IMG/M
3300016404\|Ga0182037_10779668	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300016404\|Ga0182037_11060939	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300016404\|Ga0182037_11770160	Not Available	551	Open in IMG/M
3300016404\|Ga0182037_11842201	Not Available	541	Open in IMG/M
3300016422\|Ga0182039_11234279	Not Available	676	Open in IMG/M
3300017959\|Ga0187779_10240825	Not Available	1143	Open in IMG/M
3300017974\|Ga0187777_11219562	Not Available	551	Open in IMG/M
3300018058\|Ga0187766_10820031	Not Available	651	Open in IMG/M
3300020579\|Ga0210407_10051620	All Organisms → cellular organisms → Bacteria	3072	Open in IMG/M
3300021168\|Ga0210406_10234575	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300021560\|Ga0126371_10933581	Not Available	1011	Open in IMG/M
3300021560\|Ga0126371_13090176	Not Available	563	Open in IMG/M
3300027874\|Ga0209465_10381469	Not Available	706	Open in IMG/M
3300031057\|Ga0170834_106132738	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300031546\|Ga0318538_10583290	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300031546\|Ga0318538_10784049	Not Available	517	Open in IMG/M
3300031561\|Ga0318528_10420285	Not Available	718	Open in IMG/M
3300031572\|Ga0318515_10016137	All Organisms → cellular organisms → Bacteria → Proteobacteria	3460	Open in IMG/M
3300031572\|Ga0318515_10086879	All Organisms → cellular organisms → Bacteria → Proteobacteria	1628	Open in IMG/M
3300031640\|Ga0318555_10228974	Not Available	1003	Open in IMG/M
3300031668\|Ga0318542_10057093	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300031679\|Ga0318561_10098998	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300031713\|Ga0318496_10422687	Not Available	737	Open in IMG/M
3300031719\|Ga0306917_10589955	Not Available	874	Open in IMG/M
3300031723\|Ga0318493_10351220	Not Available	802	Open in IMG/M
3300031723\|Ga0318493_10363769	Not Available	788	Open in IMG/M
3300031723\|Ga0318493_10720650	Not Available	560	Open in IMG/M
3300031736\|Ga0318501_10308671	Not Available	845	Open in IMG/M
3300031748\|Ga0318492_10453654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Candidimonas → unclassified Candidimonas → Candidimonas sp.	677	Open in IMG/M
3300031765\|Ga0318554_10158733	All Organisms → cellular organisms → Bacteria → Proteobacteria	1285	Open in IMG/M
3300031768\|Ga0318509_10036098	Not Available	2448	Open in IMG/M
3300031770\|Ga0318521_10453021	Not Available	768	Open in IMG/M
3300031770\|Ga0318521_10971077	Not Available	520	Open in IMG/M
3300031781\|Ga0318547_10130577	Not Available	1463	Open in IMG/M
3300031782\|Ga0318552_10672338	Not Available	528	Open in IMG/M
3300031793\|Ga0318548_10019547	All Organisms → cellular organisms → Bacteria → Proteobacteria	2836	Open in IMG/M
3300031799\|Ga0318565_10318510	Not Available	755	Open in IMG/M
3300031799\|Ga0318565_10602034	Not Available	528	Open in IMG/M
3300031819\|Ga0318568_10115937	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300031819\|Ga0318568_10119372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Tolypothrichaceae → Tolypothrix → Tolypothrix campylonemoides → Tolypothrix campylonemoides VB511288	1594	Open in IMG/M
3300031821\|Ga0318567_10836984	Not Available	521	Open in IMG/M
3300031835\|Ga0318517_10183227	Not Available	941	Open in IMG/M
3300031860\|Ga0318495_10281166	Not Available	742	Open in IMG/M
3300031879\|Ga0306919_10097549	All Organisms → cellular organisms → Bacteria	2061	Open in IMG/M
3300031879\|Ga0306919_10323104	Not Available	1175	Open in IMG/M
3300031880\|Ga0318544_10123313	All Organisms → cellular organisms → Bacteria → Proteobacteria	985	Open in IMG/M
3300031890\|Ga0306925_10385667	Not Available	1503	Open in IMG/M
3300031890\|Ga0306925_11098962	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300031894\|Ga0318522_10162173	Not Available	844	Open in IMG/M
3300031896\|Ga0318551_10546674	Not Available	666	Open in IMG/M
3300031897\|Ga0318520_10900865	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300031912\|Ga0306921_10667896	Not Available	1197	Open in IMG/M
3300031942\|Ga0310916_10069404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2752	Open in IMG/M
3300031946\|Ga0310910_10079638	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	2383	Open in IMG/M
3300031954\|Ga0306926_11887517	Not Available	675	Open in IMG/M
3300031981\|Ga0318531_10213428	Not Available	870	Open in IMG/M
3300032001\|Ga0306922_10883075	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300032001\|Ga0306922_11784057	Not Available	606	Open in IMG/M
3300032008\|Ga0318562_10045644	Not Available	2391	Open in IMG/M
3300032008\|Ga0318562_10355336	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300032010\|Ga0318569_10204064	All Organisms → cellular organisms → Bacteria → Proteobacteria	916	Open in IMG/M
3300032025\|Ga0318507_10022941	Not Available	2239	Open in IMG/M
3300032035\|Ga0310911_10026414	All Organisms → cellular organisms → Bacteria → Proteobacteria	2858	Open in IMG/M
3300032041\|Ga0318549_10055426	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300032042\|Ga0318545_10032515	Not Available	1716	Open in IMG/M
3300032044\|Ga0318558_10031251	Not Available	2248	Open in IMG/M
3300032044\|Ga0318558_10539373	Not Available	583	Open in IMG/M
3300032051\|Ga0318532_10176479	Not Available	759	Open in IMG/M
3300032052\|Ga0318506_10179334	Not Available	932	Open in IMG/M
3300032052\|Ga0318506_10362557	Not Available	643	Open in IMG/M
3300032055\|Ga0318575_10431364	Not Available	669	Open in IMG/M
3300032059\|Ga0318533_10089872	All Organisms → cellular organisms → Bacteria → Proteobacteria	2109	Open in IMG/M
3300032060\|Ga0318505_10351929	Not Available	696	Open in IMG/M
3300032065\|Ga0318513_10471718	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300032066\|Ga0318514_10019187	All Organisms → cellular organisms → Bacteria → Proteobacteria	3085	Open in IMG/M
3300032067\|Ga0318524_10054921	All Organisms → cellular organisms → Bacteria → Proteobacteria	1905	Open in IMG/M
3300032068\|Ga0318553_10234231	Not Available	959	Open in IMG/M
3300032068\|Ga0318553_10551442	Not Available	604	Open in IMG/M
3300032076\|Ga0306924_10607365	All Organisms → cellular organisms → Bacteria → Proteobacteria	1237	Open in IMG/M
3300032090\|Ga0318518_10527726	Not Available	604	Open in IMG/M
3300032094\|Ga0318540_10015348	All Organisms → cellular organisms → Bacteria	3094	Open in IMG/M
3300032094\|Ga0318540_10345221	Not Available	719	Open in IMG/M
3300032180\|Ga0307471_100529503	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300032261\|Ga0306920_101936310	Not Available	828	Open in IMG/M
3300033289\|Ga0310914_10806632	Not Available	837	Open in IMG/M
3300033289\|Ga0310914_11176566	Not Available	668	Open in IMG/M
3300033290\|Ga0318519_10764706	Not Available	593	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.04%
Loam	Environmental → Terrestrial → Soil → Loam	5.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	57.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1058204401	3300005332	Tropical Forest Soil	PDAQDYTMTAAARAAPQTADSQCFQFTLSSTGQVAAVNSVAGNTTVACWGSN*
Ga0070714_1005452423	3300005435	Agricultural Soil	IPDAQDYTLTAVAAQAPQTTDNTCAQFTLSSTGQQAAQDIGAVDTTKTCWGSN*
Ga0066903_1010975292	3300005764	Tropical Forest Soil	IAAPQTSDRQCTQFTLSSTGAQAALDNNANNTTRACWGSN*
Ga0066903_1086561961	3300005764	Tropical Forest Soil	NGSTMQTPNQLYSITFTIPDNQDYTLTALPVGAPQTSDSQCMRFMLSSTGEQVAQDVNVNDTTKSCWGSS*
Ga0079219_110930191	3300006954	Agricultural Soil	QDYTLTAVAAQAPQTTDNTCAQFTLSSTGQQAAQDIGAVDTTKTCWGSN*
Ga0126373_110916881	3300010048	Tropical Forest Soil	TPNLFYTITFAIPDAQDYTMTAVAIAAPQTNDNQCFQFTLSSTGQQAAQDNNANNTTQLCWGSN*
Ga0126373_114626712	3300010048	Tropical Forest Soil	LTAVAIAAPQTADNQCAQFTLSSGGVQAALDNNASNTTKACWGSN*
Ga0126376_106542872	3300010359	Tropical Forest Soil	IGTPNQLYTITFAIPDPQDYTMTAVASAAPQTSDSQCAQFTLASSGQQAAQDANAIDTTKSCWGSK*
Ga0126372_117676521	3300010360	Tropical Forest Soil	TMVTPQLFYNITFAIPDPQTYTLTAVAALAPQTNDNTCAQFTLASTGQQAAQDTSAVDQTKTCWGSN*
Ga0126372_127540151	3300010360	Tropical Forest Soil	NVDGTVVNNGSTMQTPNQLYSITFTIRDNQGYTLTALPVGAPQTSDSQCMRFMLSSNGEQVAQDVNVNDTTKSCWGSS*
Ga0126378_115872002	3300010361	Tropical Forest Soil	VDGTVVNNGSTMQTPNQLYSITFTIRDNQGYTLTALPVGAPQTSDSQCMRFMLSSTGEQVAQDVNVNDTTKSCWGSS*
Ga0126378_131437541	3300010361	Tropical Forest Soil	VNGTVVNNGSTIQTPNLFYRITVAIPDAQDYTLTAVAIAAPQTSDRTCAQFTLSSTGAQGALDNNASNTTKACWGSN*
Ga0126379_124517501	3300010366	Tropical Forest Soil	DPQDYTLTATQRAAPQTGDDQCKVFTLLSTGQQAAQNSGAVNTTQACWGSN*
Ga0126381_1031378021	3300010376	Tropical Forest Soil	NGYYTIAFAIPDPQDYTLTATQRTAPQTGDNQCKVFTLSSTGQQQAQDNKSPPNDTTRACWGSN*
Ga0126383_121467472	3300010398	Tropical Forest Soil	DYTMTAVAIAAPQTADNQCAQFTLSSTGQQAAQDNNTNPNTQLCWGSN*
Ga0126383_127158801	3300010398	Tropical Forest Soil	DNQDYTLTAVAIAAPQTSDRQCTQFTLSSTGAQGALDNNANNTTRACWGSN*
Ga0134121_103695061	3300010401	Terrestrial Soil	APQTTDNTCAQFTLSSTGQQAAQDIGAVDTTKTCWGSN*
Ga0150983_120333412	3300011120	Forest Soil	LACNVNGTVMNNASTMQTPNLLYTITFTIPDAQDYTLTAVPAAAPQTGDAQCVQFTLSSTGAQAAQDHSAANTTKTCWGSN*
Ga0164302_116613522	3300012961	Soil	DYTLTAVAAQAPQTTDNTCAQFTLSSTGQQAAQDIGAVDTTKTCWGSN*
Ga0126369_103353831	3300012971	Tropical Forest Soil	MQTPNLYYNITFAIPDNQDYTLTAVPIAAPQTSDRQCVQFTLSSTGAQAALDNNANNSTKACWGSN*
Ga0126369_120653301	3300012971	Tropical Forest Soil	NDGSTIVSPNLYYTITFAIPDPQDYTLTAVATAPPQTADNQCAQFTLSSTGQQAAQDNNANPNTLLCWGSN*
Ga0126369_132706432	3300012971	Tropical Forest Soil	TFAIPDAQDYTMTAVAIAAPQTADNQCAQFTFSSTGQQAAQDNNANNTTQLCWGSN*
Ga0182041_118632571	3300016294	Soil	GIPDPQDYTLTAAAIAPPQTADNQCFQFTLSSSGQVTAVDNSANDTTVACWGSK
Ga0182040_104629642	3300016387	Soil	AVAIAAPQTTDNQCTQFTLSSGGVQAALDNNASNTTKACWGSN
Ga0182037_107796682	3300016404	Soil	LYKITFAIPDNQDYTLTAVAIAAPQTSDSQCTVFTLSSAGAQAAQDNNGNNATKACWGSN
Ga0182037_110609392	3300016404	Soil	NAFYSITFAIPDPQDYTLTAAAIAPPQTNDNQCFVFTLASSGQVAAQDNSANNTTQACWGSN
Ga0182037_117701602	3300016404	Soil	FAIPDKQDYTLTAVAIQAPQTGDIQCAQFVMSSTGQWTAQDSHGNPTTKNCWGSN
Ga0182037_118422011	3300016404	Soil	GVVVNNGSTMQTLNQFYNITFTIPDNQDYTLTAVAIAAPQTSDRTCAQFTLASTGAQAALDNNANNTTKACWGSN
Ga0182039_112342792	3300016422	Soil	FAIPDNQDYTLTAVAIAAPQTTDTQCATFTLSSTGQQAATGSGPNPTKTCWGSN
Ga0187779_102408253	3300017959	Tropical Peatland	NDTSTIGTPNLLYTITFAIPDAQDYTMSAVASAAPQTSDNQCAQFTLSSSGQQAAQDNNANNTTRLCWGSN
Ga0187777_112195621	3300017974	Tropical Peatland	VIVNDTSTIGTPNLLYTITFAIPDAQDYTMSAVASAAPQTSDNQCAQFTLSSSGQQAAQDNNANNTTRLCWGSN
Ga0187766_108200311	3300018058	Tropical Peatland	RTFKYTACNVNGTVMNNGSTMQTPNLFYNITFAIPDNQNYTLTAVAIAGQQTPDTQCTQFTLSSTGAQAAQDNHASNTTKACWGSN
Ga0210407_100516201	3300020579	Soil	QTPNLFYTITFTIPDAQDYTLTAVPAAAPQTGDAQCVQFTLSSTGAQAAQDHSAANTTKTCWGSN
Ga0210406_102345751	3300021168	Soil	PAAAPQTGDAQCVQFTLSSTGAQAAQDHSAANTTKTCWGSN
Ga0126371_109335811	3300021560	Tropical Forest Soil	QDYTMTAVATAAPQTSDSQCAQFTLASSGQQAAQDANANDNTKLCWGSN
Ga0126371_130901761	3300021560	Tropical Forest Soil	CNVNGAVMNNGSTMQTPNLFYRITFTIPDNQDYTLTAVAIAAPQTADTQCTQFTLASTGTQAAVDNSANNTTKACWGSN
Ga0209465_103814691	3300027874	Tropical Forest Soil	DPQDYTMTAVATAAPQTSDSQCAQFTLASRGPQAAQDVNANDNTKLCWGSN
Ga0170834_1061327383	3300031057	Forest Soil	RAAAPQTTDNQCAQFTLLSTGQQTAQDVSTNPTTLTCWRSN
Ga0318538_105832902	3300031546	Soil	LTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0318538_107840491	3300031546	Soil	PNQYYTITFAIPDAQDYTMTAVARLAPQTADSQCFTFTLSSTGQVAAVNSAAGNTTVSCWGSN
Ga0318528_104202851	3300031561	Soil	IPVADGSVLPTPNLYYNITFAIPDAQDYLLTATAVNAPQTGDAACAQFTLSSSGQQAAQDSNANPNTLLCWGSN
Ga0318515_100161371	3300031572	Soil	NLLYKITFAIPDNQDYTLTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0318515_100868793	3300031572	Soil	NLYYTITFAIPDAQDYTMTAVATAPPQTADNACAQFTLSSTGQQAAQDNNANPNTQLCWGSN
Ga0318555_102289741	3300031640	Soil	DYTLTAAAIAPPQTNDNQCFVFTLASSGQVAAQDNSANNTTQACWGSN
Ga0318542_100570931	3300031668	Soil	FAIPDAQTYTLTAVPVLAPQTADNSCAQFTLASTGQQTAQDAGANPSTKTCWGSN
Ga0318561_100989981	3300031679	Soil	DGSVLGTPNLYYSIAFAIPDPQTYTLTATAIAPPQTVDNQCFTFTLFSSGQVAAVDNAANNTTLPCWGSN
Ga0318496_104226872	3300031713	Soil	QDYTMTAVATAPPQTADNACAQFTLSSTGQQAAQDNNANPNTQLCWGSN
Ga0306917_105899551	3300031719	Soil	SRSFKYTACNVNGVVVNNGSTMQTPNLFYNITFTIPDNQDYTLTAVAIAAPQTSDRQCAQFTLSSTGAQGALDNNANNTTRACWGSN
Ga0318493_103512202	3300031723	Soil	APPQTADNACAQFTLSSTGQQAAQDNNANPNTQLCWGSN
Ga0318493_103637692	3300031723	Soil	VQGNVVNDGSVLQTPNAFYSITFAIPDPQDYTLTAAAIAPPQTNDNQCFVFTLASSGQVAAQDNSANNTTQACWGSN
Ga0318493_107206502	3300031723	Soil	LFYTITFAIPDAQDYTMTAVATAAPQTNDNQCAQFTLSSTGQQAAQDNNANNTTQTCWGS
Ga0318501_103086711	3300031736	Soil	TMTAVATAPPQTADNACAQFTLSSTGQQAAQDNNANPNTQLCWGSN
Ga0318501_104140071	3300031736	Soil	PQTVDTQCVQFTLAGTGTQAAQDNHAMSTTRACWGSN
Ga0318492_104536542	3300031748	Soil	AFYSITFAIPDPQDYTLTAAAIAPPQTNDNQCFVFTLASSGQVAAQDNSANNTTQACWGS
Ga0318554_101587333	3300031765	Soil	NLFYTITFAIPDAQDYTMTAVATAAPQTNDNQCAQFTLSSTGQQAAQDNNANNTTQTCWGSN
Ga0318509_100360981	3300031768	Soil	FKYPACNVSGTVMNNGSTMQTPNALYKITFAIPDNQDYTLTAVAIAAPQTSDSQCTVFTLSSAGAQAAQDNNGNNATKACWGSN
Ga0318521_104530211	3300031770	Soil	TITFAIPDAQDYTMTAVATAAPQTNDNQCAQFTLSSTGQQAAQDNNANNTTQTCWGSN
Ga0318521_109710771	3300031770	Soil	FAIPDAQTYTLTAVPVLAPQTTDNSCAQFTLASTGQQTAQDAGANPNTKTCWGSN
Ga0318547_101305771	3300031781	Soil	NQDYTLTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0318552_106723382	3300031782	Soil	APAAPAAPCNVNGKPVNDGSTIVTPNGFYTITFAIPDAQDYTMTAVATAPPQTADNACAQFTLSSTGQQAAQDNNANPNTQLCWGSN
Ga0318529_104374222	3300031792	Soil	TYTLTAVPVLAPQTADNSCAQFTLASTGQQTAQDAGANPNTKTCWGSN
Ga0318548_100195474	3300031793	Soil	PDNQDYTLTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0318565_103185102	3300031799	Soil	VNDTSTIGTPNLYYTITFAIPDAQDYTMTAVATAPPQTADNACAQFTLSSTGQQAAQDNNANPNTQLCWGSN
Ga0318565_106020341	3300031799	Soil	VVVNNGSIMQTPNLFYNITFAIPDNQDYTLTAVAIAAPQTSDRQCAQFTLSSTGAQGALDNNANNTTRACWGSN
Ga0318568_101159371	3300031819	Soil	DAQDYTLTAVPIAAPQTVDTQCVQFTLAGTGTQAAQDNHAMSTTRACWGSN
Ga0318568_101193721	3300031819	Soil	GVVVNNGSTMQTPNLFYNITFTIPDNQDYTLTAVAIAAPQTSDRTCAQFTLSSTGAQAALDNNANNTTKACWGSN
Ga0318567_108369841	3300031821	Soil	IAAAQTADRQCTVFTLSSTGAQAAQDNLGNNATKACWGSN
Ga0318517_101832272	3300031835	Soil	AIPDNQDYTLTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0318495_102811662	3300031860	Soil	FYNITFAIPDAQTYTLTAVPVLAPQTADNSCAQFTLASTGQQTAQDAGANPSTKTCWGSN
Ga0306919_100975491	3300031879	Soil	SQRFTYLNCNVSGTVVNNGSTVTTPNAFYRITFAIPDAQDYTLTAVPIAAPQTVDTQCVQFTLAGTGTQAAQDNHAMSTTRACWGSN
Ga0306919_103231042	3300031879	Soil	FAIPDAQDYTMTAVATAAPQTNDNQCAQFTLSSTGQQAAQDNNANNTTQTCWGSN
Ga0318544_101233132	3300031880	Soil	RFTYVGCNVNGTAMNNGSTMLTPNQFYTIAFAIPDAQDYTLTATPFAAPQTTDSQCAQFTLASTGLQAAQDANANNTTKACWGSN
Ga0306925_103856671	3300031890	Soil	AIPDAQDYTLTATPFAAPQTTDSQCAQFTLASTGLQAAQDANANNTTKACWGSN
Ga0306925_110989622	3300031890	Soil	VMPDAQDYTLTAVAIAAPQTTDNQCTQFTLSSGGVQAALDNNASNTTKACWGSN
Ga0318522_101621732	3300031894	Soil	GCTVQGNVVNDGSVLQTPNAFYSITFAIPDPQDYTLTAAAIAPPQTNDNQCFVFTLASSGQVAAQDNSANNTTQACWGSN
Ga0318551_105466742	3300031896	Soil	PDNQDYTLTAVAIAAPQTSDRQCAQFTLSSTGAQGALDNNANNTTRACWGSN
Ga0318520_109008651	3300031897	Soil	GTVVNNGSTVTTPNAFYRITFAIPDAQDYTLTAVPIAAPQTVDTQCVQFTLAGTGTQAAQDNHAMSTTRACWGSN
Ga0306921_106678961	3300031912	Soil	YTLTAVAIAAPQTTDNQCTQFTLSSGGVQAALDNNASNTTKACWGSN
Ga0310916_100694041	3300031942	Soil	APQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0310910_100796382	3300031946	Soil	VMNNGSTMQTPNLLYKITFAIPDNQDYTLTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0306926_118875172	3300031954	Soil	AVATAAPQTADNQCAQFTLSSTGQQAAQDNNANPNTQLCWGSN
Ga0318531_102134282	3300031981	Soil	VNAIVVNDTSTIGTPNLFYTITFAIPDAQDYTMTAVATAAPQTNDNQCAQFTLSSTGQQAAQDNNANNTTQTCWGSN
Ga0306922_108830751	3300032001	Soil	FAIPDNQDYTLTAVAIAAPQTSDSQCTVFTLSSAGAQAAQDNNGNNATKACWGSN
Ga0306922_117840571	3300032001	Soil	VNGVVVNNGSTMQTPNLFYNITFTIPDNQDYTLTAVAIAAPQTSDRTCAQFTLASTGAQAALDNNANNTTKACWGSN
Ga0318562_100456444	3300032008	Soil	QGNVVNDGSVLQTPNAFYSITFAIPDPQDYTLTAAAIAPPQTNDNQCFVFTLASSGQVAAQDNSANNTTQACWGSN
Ga0318562_103553362	3300032008	Soil	VVVNNGSTMQTPNLFYNITFTIPDNQDYTLTAVAIAAPQTSDRTCAQFTLASTGAQAALDNNANNTTKACWGSN
Ga0318569_102040641	3300032010	Soil	ACNVSGTVMNNGSTMQTPNLLYKITFAIPDNQDYTLTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0318507_100229412	3300032025	Soil	DYTLTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0310911_100264141	3300032035	Soil	YTLTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0318549_100554261	3300032041	Soil	VQGQVVNDGSVLGTPNLYYSIAFAIPDPQTYTLTATAIAPPQTVDNQCFTFTLFSSGQVAAVDNAANNTTLPCWGSN
Ga0318545_100325151	3300032042	Soil	NNGSTMQTPNLLYKITFAIPDNQDYTLTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0318558_100312512	3300032044	Soil	QDYTLTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0318558_105393731	3300032044	Soil	SRSFKYTACNVNGVVVNNGSTMQTPNLFYNITFTIPDNQDYTLTAVAIAAPQTSDRTCAQFTLASTGAQAALDNNANNTTKACWGSN
Ga0318532_101764792	3300032051	Soil	LYYSIAFAIPDPQTYTLTATAIAPPQTVDNQCFTFTLFSSGQVAAVDNAANNTTLPCWGS
Ga0318506_101793342	3300032052	Soil	NQDYTLTAVAIAAPQTSDSQCTVFTLSSAGAQAAQDNNGNNATKACWGSN
Ga0318506_103625572	3300032052	Soil	QDYTMTAVATAAPQTNDNQCAQFTLSSTGQQAAQDNNANNTTQTCWGSN
Ga0318575_104313642	3300032055	Soil	TYVGCNVNGVIVNDTSTIGTPNLFYTITFAIPDAQDYTMTAVAIAPPQTADNPCAQFTLSSTGQQAAQDNNANPNTQLCWGSN
Ga0318533_100898723	3300032059	Soil	VIVNDTSTIGTPNLYYTITFAIPDAQDYTMTAVATAPPQTADNACAQFTLSSTGQQAAQDNNANPNTQLCWGSN
Ga0318505_103519292	3300032060	Soil	STIVTPNGFYTITFGIPDAQDYTMTAAPNAGPQTADSQCATFTLSSSGQQAATGSGPNPTQTCWGSN
Ga0318513_104717181	3300032065	Soil	AQDYTMTAVATAAPQTNDNQCAQFTLSSTGQQAAQDNNANNTTKACWGSN
Ga0318514_100191874	3300032066	Soil	KYAACNVSGTVMNNGSTMQTPNLLYKITFAIPDNQDYTLTAVAIAAPQTSDSQCTVFTLSSTGARAAQDNNGNNATKACWGSN
Ga0318524_100549213	3300032067	Soil	LQTPNAFYSITFAIPDPQDYTLTAAAIAPPQTNDNQCFVFTLASSGQVAAQDNSANNTTQACWGSN
Ga0318553_102342311	3300032068	Soil	VLGTPNLYYSIAFAIPDPQTYTLTATAIAPPQTVDNQCFTFTLFSSGQVAAVDNAANNTTLPCWGSN
Ga0318553_105514421	3300032068	Soil	DYTMTAVATAPPQTADNACAQFTLSSTGQQAAQDNNANPNTQLCWGSN
Ga0306924_106073652	3300032076	Soil	TFAIPDNQDYTLTAVAIAAPQTTDTQCATFTLSSTGQHAATGSGPNPTKTCWGSN
Ga0318518_105277261	3300032090	Soil	SQNFTYVGCTVTNVPVADGAVLPTPNLYYNITFAIPDAQTYLLTATAVNAPQTGDAACAQFTLSSSGQQAAQDSNANPNTLLCWGSN
Ga0318540_100153483	3300032094	Soil	NLFYTITFAIPDAQDYTMTAVAIAAPQTNDNQCAQFTLSSTGQQAAQDNNANNTTKACWGSN
Ga0318540_103452211	3300032094	Soil	GCTVQGQVVNDGSVLGTPNLYYSIAFAIPDPQTYTLTATAIAPPQTVDNQCFTFTLFSSGQVAAVDNAANNTTLPCWGSN
Ga0307471_1005295033	3300032180	Hardwood Forest Soil	TYLNCPVSGNAIPNPVVDGSTMVTPQLFYNITFAIPDAQDYTLTAVAAQAPQTTDNTCAQFTLSSTGQQAAQDTGAVDTTKTCWGSN
Ga0306920_1019363102	3300032261	Soil	KQDYTLTAVAIQAPQTGDIQCAQFVMSSTGQWTAQDSHGNPTTKNCWGSN
Ga0310914_108066322	3300033289	Soil	DAQDYTMTAVATAPPQTADNACAQFTLSSTGQQAAQDNNANPNTQLCWGSN
Ga0310914_111765662	3300033289	Soil	AVAIAAPQTSDSQCTVFTLSSAGAQAAQDNNGNNATKACWGSN
Ga0318519_107647062	3300033290	Soil	VNGVVVNNGSTMQTPNLFYNITFTIPDNQDYTLTAVAIAAPQTSDRTCAQFTLSSTGAQAALDNNANNTTKACWGSN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082220

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences