NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F082257

Metagenome / Metatranscriptome Family F082257

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F082257
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 82 residues
Representative Sequence MSNWYTAEVEAEFRRREWQRAVEADARAAQARPANGRMRWPRIPHLTLANLRSLAVPRPSFTSRLEPDCRTVVC
Number of Associated Samples 55
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 43.36 %
% of genes near scaffold ends (potentially truncated) 46.90 %
% of genes from short scaffolds (< 2000 bps) 90.27 %
Associated GOLD sequencing projects 54
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (77.876 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(52.212 % of family members)
Environment Ontology (ENVO) Unclassified
(53.982 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.832 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.31%    β-sheet: 0.00%    Coil/Unstructured: 65.69%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF13420Acetyltransf_4 11.50
PF13416SBP_bac_8 3.54
PF00005ABC_tran 0.88
PF02852Pyr_redox_dim 0.88


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.88 %
UnclassifiedrootN/A22.12 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c2253765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium856Open in IMG/M
3300000750|JGI12272J11983_1252080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium506Open in IMG/M
3300002568|C688J35102_119014141All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium626Open in IMG/M
3300004153|Ga0063455_100579467All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300004463|Ga0063356_104666695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium589Open in IMG/M
3300004801|Ga0058860_12180374All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium893Open in IMG/M
3300005045|Ga0071328_137797All Organisms → cellular organisms → Bacteria4638Open in IMG/M
3300006876|Ga0079217_10626006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium705Open in IMG/M
3300006894|Ga0079215_10120969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1195Open in IMG/M
3300006918|Ga0079216_10442375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium834Open in IMG/M
3300007004|Ga0079218_13236078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium551Open in IMG/M
3300007790|Ga0105679_10690673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1051Open in IMG/M
3300009789|Ga0126307_10058559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3019Open in IMG/M
3300009789|Ga0126307_10073891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2686Open in IMG/M
3300009789|Ga0126307_10256121All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1407Open in IMG/M
3300009789|Ga0126307_10291197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1314Open in IMG/M
3300009789|Ga0126307_10336430All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1215Open in IMG/M
3300009789|Ga0126307_10926577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium704Open in IMG/M
3300009840|Ga0126313_10087949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2264Open in IMG/M
3300009840|Ga0126313_10103925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2094Open in IMG/M
3300009840|Ga0126313_10220602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1461Open in IMG/M
3300009840|Ga0126313_10308076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1240Open in IMG/M
3300009840|Ga0126313_10336553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1186Open in IMG/M
3300009840|Ga0126313_10369982All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1133Open in IMG/M
3300009840|Ga0126313_10772221All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium781Open in IMG/M
3300009840|Ga0126313_10924321All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium712Open in IMG/M
3300010036|Ga0126305_10017439All Organisms → cellular organisms → Bacteria3720Open in IMG/M
3300010036|Ga0126305_10052612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium2314Open in IMG/M
3300010036|Ga0126305_10094351All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1787Open in IMG/M
3300010036|Ga0126305_10098138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1755Open in IMG/M
3300010036|Ga0126305_10983154Not Available578Open in IMG/M
3300010037|Ga0126304_10049780All Organisms → cellular organisms → Bacteria2541Open in IMG/M
3300010037|Ga0126304_10718944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium675Open in IMG/M
3300010037|Ga0126304_10801052Not Available639Open in IMG/M
3300010038|Ga0126315_10204711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1190Open in IMG/M
3300010038|Ga0126315_10459468Not Available807Open in IMG/M
3300010038|Ga0126315_10596978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium712Open in IMG/M
3300010038|Ga0126315_10639475Not Available690Open in IMG/M
3300010038|Ga0126315_10859905Not Available601Open in IMG/M
3300010039|Ga0126309_10294936Not Available935Open in IMG/M
3300010039|Ga0126309_10401913All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria820Open in IMG/M
3300010040|Ga0126308_10116187All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1657Open in IMG/M
3300010040|Ga0126308_10266043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1119Open in IMG/M
3300010040|Ga0126308_10292935All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1068Open in IMG/M
3300010040|Ga0126308_10384760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium934Open in IMG/M
3300010040|Ga0126308_10700605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium696Open in IMG/M
3300010040|Ga0126308_10758338Not Available670Open in IMG/M
3300010040|Ga0126308_10772703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium664Open in IMG/M
3300010041|Ga0126312_10239964Not Available1272Open in IMG/M
3300010041|Ga0126312_11075586Not Available590Open in IMG/M
3300010042|Ga0126314_10075636All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2246Open in IMG/M
3300010042|Ga0126314_10113536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1855Open in IMG/M
3300010042|Ga0126314_11365362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium532Open in IMG/M
3300010042|Ga0126314_11380331Not Available529Open in IMG/M
3300010044|Ga0126310_10095685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1787Open in IMG/M
3300010044|Ga0126310_10133644All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1556Open in IMG/M
3300010044|Ga0126310_10154675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1464Open in IMG/M
3300010044|Ga0126310_10459789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium921Open in IMG/M
3300010044|Ga0126310_10602660All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium819Open in IMG/M
3300010044|Ga0126310_10814014Not Available719Open in IMG/M
3300010045|Ga0126311_10059013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium2499Open in IMG/M
3300010045|Ga0126311_10416864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1036Open in IMG/M
3300010045|Ga0126311_10455227All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium994Open in IMG/M
3300010045|Ga0126311_10459854All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300010045|Ga0126311_10769684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium774Open in IMG/M
3300010045|Ga0126311_11014181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium679Open in IMG/M
3300010166|Ga0126306_10277765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1285Open in IMG/M
3300010166|Ga0126306_10402469Not Available1071Open in IMG/M
3300010166|Ga0126306_10678626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium825Open in IMG/M
3300010166|Ga0126306_11231729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium616Open in IMG/M
3300010166|Ga0126306_11398853Not Available579Open in IMG/M
3300011332|Ga0126317_10474429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium563Open in IMG/M
3300012212|Ga0150985_105025668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium598Open in IMG/M
3300012212|Ga0150985_108210687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium727Open in IMG/M
3300012212|Ga0150985_117690209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium666Open in IMG/M
3300012212|Ga0150985_122174010Not Available575Open in IMG/M
3300012469|Ga0150984_101281813Not Available990Open in IMG/M
3300012469|Ga0150984_112549766All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium709Open in IMG/M
3300012469|Ga0150984_112756680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium621Open in IMG/M
3300012469|Ga0150984_120255574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium610Open in IMG/M
3300015371|Ga0132258_13541937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1069Open in IMG/M
3300015372|Ga0132256_103784913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium509Open in IMG/M
3300015373|Ga0132257_103465185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium574Open in IMG/M
3300018422|Ga0190265_11771537Not Available726Open in IMG/M
3300018465|Ga0190269_11222977All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium592Open in IMG/M
3300018466|Ga0190268_11077652Not Available651Open in IMG/M
3300018466|Ga0190268_12192805Not Available516Open in IMG/M
3300018920|Ga0190273_11679252Not Available572Open in IMG/M
3300019254|Ga0184641_1272103Not Available554Open in IMG/M
3300019269|Ga0184644_1480644Not Available674Open in IMG/M
3300019356|Ga0173481_10376789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium686Open in IMG/M
3300027691|Ga0209485_1213769All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium606Open in IMG/M
3300030496|Ga0268240_10119412Not Available630Open in IMG/M
3300030829|Ga0308203_1053353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium618Open in IMG/M
3300030902|Ga0308202_1081854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium642Open in IMG/M
3300030990|Ga0308178_1103926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium606Open in IMG/M
3300031058|Ga0308189_10316272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium616Open in IMG/M
3300031091|Ga0308201_10215569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium643Open in IMG/M
3300031092|Ga0308204_10208336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium613Open in IMG/M
3300031092|Ga0308204_10208980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium613Open in IMG/M
3300031092|Ga0308204_10222320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium599Open in IMG/M
3300031092|Ga0308204_10244836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium579Open in IMG/M
3300031092|Ga0308204_10256866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium569Open in IMG/M
3300031099|Ga0308181_1114064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium598Open in IMG/M
3300031548|Ga0307408_100101415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2194Open in IMG/M
3300031731|Ga0307405_10983816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium719Open in IMG/M
3300031824|Ga0307413_11234012Not Available651Open in IMG/M
3300031938|Ga0308175_100294121All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1653Open in IMG/M
3300031995|Ga0307409_101923303Not Available621Open in IMG/M
3300032002|Ga0307416_103095677Not Available556Open in IMG/M
3300032004|Ga0307414_10562707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium1018Open in IMG/M
3300032005|Ga0307411_11784277All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium571Open in IMG/M
3300034644|Ga0370548_083010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium624Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil52.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere6.19%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.42%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere3.54%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.54%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.77%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.77%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.89%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.89%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.89%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000750Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004801Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005045Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USAEnvironmentalOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019254Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300027691Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300030496Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)EnvironmentalOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_225376523300000033SoilAVEADARASLARPATRQLRWPRIGRLTVANLRSLAVPRPSFTPRLEPDCRTVAX*
JGI12272J11983_125208013300000750SoilREWQRAVEADARAAQARTGNGRKHWPHLSLASLRSLAAPRLPFSSSLGLRRRSVAC*
C688J35102_11901414113300002568SoilTDAEENEESVMSNWYTVEVEAEFRRREWQRTVEADARAAQARPAKGRMRWPRIPRLTLANLRSLTVPRPSFTSRLEPDCRTVVC*
Ga0063455_10057946713300004153SoilMRPAQSATDAEENEESVMSNWYTVEVEAEFRRREWQRTVEADARAAQARPAKGRMRWPRIPRLTLANLRSLTVPRPSFTSRLEPDCRTVVC*
Ga0063356_10466669523300004463Arabidopsis Thaliana RhizosphereTEAEFRRREWQRVVEADARVAQVRVATGRMRWPRVPHLTLANLRSLVLPRPSLISHLEPDCRTVVC*
Ga0058860_1218037413300004801Host-AssociatedMNNWYAIETEAEFRRREWQRVVEADARAAQVRPVNGRMRWPRIANATLATLRSLAMARLSFNSHLEPDCHTVVC*
Ga0071328_13779743300005045PermafrostMNNWYAIETEAEFRRREWQREVEADALAAQARPANGRTRWPRLGRLTLANLRSLAVPRPSFTSRLEPDCRTVAC*
Ga0079217_1062600613300006876Agricultural SoilTRDLTNLSLPRSIDVAGVGTRLARSATNAEDNEESIMNNWYAIETEAQFRRREWERAVEADARAAQARPADRESRWPRIAQRALANLRSLAMPRPSFTSRLEPDCRTVAC*
Ga0079215_1012096933300006894Agricultural SoilRAVEANARAALARPISRQVRWPRIAQLTLANLRSLAVPRPSFTSRLEPDCRTVAC*
Ga0079216_1044237523300006918Agricultural SoilVAGVGTRLARSATNAEDNEESIMNNWYAIETEAQFRRREWERAVEADARAAQARPANRELRWPRIAQLALANLRSLAMPRPSFTSRLEPDCRTVAC*
Ga0079218_1323607813300007004Agricultural SoilMNNWYAIETEAQFRRREWERAVEADARAAQARPANRQLRWPRIAQLALANLRSLAVPRPSFTSRLEPDCRTVAC*
Ga0105679_1069067313300007790SoilQSATDAEENEESVMSNWYTAEVEAEFRRREWQRAVEADARAAQASPANGQMRWPRIPHLTLANLRSLAVLRPSFTSRLEPDCRTAVC*
Ga0126307_1005855933300009789Serpentine SoilMHNWYAIETETEFRRREWQRAIEADARAAQARPANRQPRWPRLGRLTLANLRSLAVPRPSFTSRLEPDCQTVAC*
Ga0126307_1007389133300009789Serpentine SoilVAGVGTRLTRSATDAKEIEESIMNNWYAIETEAAFRRREWQRAIEADALAAQARPVNGRPRWPRLGRLTLANLRRLAVPRPSFTAGLEPDCRTVVC*
Ga0126307_1025612133300009789Serpentine SoilRSATDAQENEESIMSNWYTIETEAEFRRREWQRAVEADARASLARPAARQLRWPRIGRLTVANLRSLAVPRPSFTPHLEPDCRTVAC*
Ga0126307_1029119723300009789Serpentine SoilMNNWYAVETEAEFRRREWQRAVEADALAAQARPAHGRTRWPRLERLTFANLRALALSRPSFTARLEPDCRTVVC*
Ga0126307_1033643023300009789Serpentine SoilLTWQERGTRPAQSATNAEENEESAMNNWYAIETEAEFRRREWQRVVEADARAAQARAATGRMRWPRVPHLTLANLRSLVLPRPSFISHLEPDCRTVVC*
Ga0126307_1092657713300009789Serpentine SoilGFRRRELQRAVEAEARAIQARPANERMWWPRIPYPTLASLKALAVPRPSFTSRLEPDCRTVVC*
Ga0126313_1008794933300009840Serpentine SoilMSNWYTIETEAEFRRREWQRAVEADARASLARPATRQLRWPRIGRLTLANLRALAVRQPSFTPHLEPDCRTVAC*
Ga0126313_1010392523300009840Serpentine SoilVAGVGTRLTRSATDAKEIEESIMNNWYAIETEAAFRRREWQRAIEADALAAQASPANGWVRWPRLGRLTLANLRRLAVPRPSFTAGLEPDCRTVVC*
Ga0126313_1022060223300009840Serpentine SoilMNNWYAIETEAEFRQREWQRAVEADARATQARPVNGRMRWPRIANATLATLRSLAMARPSFNSHLEPDCHTAVC*
Ga0126313_1030807623300009840Serpentine SoilMNNWYAAEVEAEFRRREWQRAVEAEARAAEARPANERMRWPRIPYPTLASLKALAVPRPSFTSRLEPDCRTVVC*
Ga0126313_1033655313300009840Serpentine SoilMSNWYTVEIEAEFRRREWQRAVEADARAAQARPAHGRMRWPRIPHLTLANLRSLGLPRLSFASRLEPDCRTVVC*
Ga0126313_1036998223300009840Serpentine SoilMNNWYAIETEAEFRRREWQRVVELDARSAQARPANGRMRWPRIPHLSLANVRSLAMPRPSFTSRLEPDCRTVAC*
Ga0126313_1077222123300009840Serpentine SoilVEAEFRRREWQRAVEIDARAAQARPANGRLRWPRIPHLTLANLRSLAVPRPSFTSRLEPDCRTVVC*
Ga0126313_1092432113300009840Serpentine SoilRRHEWQRAVEADARASLARPATRQLRWPRIGRLTVANLRSLAVSRPSFTPRLEPDCRTVAC*
Ga0126305_1001743953300010036Serpentine SoilMHNWYAIETEAEFRRREWQRAIEADVRAAQARPANRRPRWPRLGRLTLANLRSLAVPRPSFTSRLEPDCQTVAC*
Ga0126305_1005261233300010036Serpentine SoilLTWQERGTRPAQSATNAEENEESAMNNWYAIETEAEFRRREWQRVVEADARAAQARAATGRMRWPRVPHLTLANLRSLVLPRPSLISHLEPDCRTVVC*
Ga0126305_1009435123300010036Serpentine SoilMSNWYTIETEAEFRRREWQRAVEADARASLARPATRQLRWPRIGRLTLANLRVLAVRQPSFTPHLEPDCRTVAC*
Ga0126305_1009813813300010036Serpentine SoilLTWQERGTRPAQSATNAEENEEAAMNNWYAIETEAEFRRREWQRVVEADARAAQARAATGRMRWPRVPHLTLANLRSLVLLRPSFISHLEPDCRTVVC*
Ga0126305_1098315433300010036Serpentine SoilFDIEIEVAHRGREWQRAVEADARAAQARPVTRQVRWPRIGRLALANLGSLALPRPSFTARLEPDCRTVAG*
Ga0126304_1004978033300010037Serpentine SoilLTWQERGTRPAQSATNAEENEEAAMNNWYAIETEAEFRRREWQRVVEADARAAQARAATGRMRWPRVPHLTLANLRSLVLPRPSFISHLEPDCRTVVC*
Ga0126304_1071894423300010037Serpentine SoilQENEESIMSNWYTIETEAEFRRREWQRAVEADARASLARPATRQLRWPRIGRLTLANLRVLAVRQPSFTPHLEPDCRTVAC*
Ga0126304_1080105213300010037Serpentine SoilVAGVGTRLTRSATDAKEIEESIMNNWYAIETEAAFRRREWQRAIEADALAAQARRANGWVRWPRLGRLTLANLRRLAVPRPSFTAGLEPDCRTVVC*
Ga0126315_1020471123300010038Serpentine SoilMNNWYAAEVEAEFRRREWQRAVEAEARAAEACPANGRMRWPRIPYLTLASLKSLAVPRPSFTSRLEPDCRTVVC*
Ga0126315_1045946823300010038Serpentine SoilMSNWYTIETEAEFRRREWQRAVEADARASLARPAARQLRWPRIGRLTVANLRSLAVPRPSFTPHLEPDCRTVAC*
Ga0126315_1059697813300010038Serpentine SoilEFRRREWQRAVEADARASLARPATRQLRWPRIGRLTLANLRALAVRQPSFTPHLEPDCRTVAC*
Ga0126315_1063947513300010038Serpentine SoilMNNWYAIETEADFRRREWQRVVELDARSAQARPANGRMRWPRIPHLSLANLRSLAVPGPSFTSRLEPDCRTVAC*
Ga0126315_1085990513300010038Serpentine SoilEESIMNNWYAIETEAAFRRREWQRAIEADALAAQASPANGWVRWPRLGRLTLANLRRLAVPRPSFTAGLEPDCRTVVC*
Ga0126309_1029493633300010039Serpentine SoilVGTRLARSATDAKENEESVMNNWYAVETEAAFRRREWHRAVEADALAAQARPANGRTRWPRLGGLTLANLRSLALSRPSFTARLEPDCRTVAC*
Ga0126309_1040191323300010039Serpentine SoilMSNWYTAEVEAEFRRREWQRAVEADARAAQARPANGRMRWPRIPHLTLANLRSLAVPRPSFTSRLEPDCRTVVC*
Ga0126308_1011618723300010040Serpentine SoilMHNWYAIETETEFRRREWQRAIEADARAAQARQANRQPRWPRLGRLTLANLRSLAVPRPSFTSRLEPDCQTVAC*
Ga0126308_1026604323300010040Serpentine SoilMNNWYAAEVEAEFRRREWQRAVEAEARVAQACPANGRMRWPRIPYLTLASLKSLAVPRPSFTSRLEPDCRTVVC*
Ga0126308_1029293523300010040Serpentine SoilVAGVGTRLTRSATDAKEIEESIMNNWYAIETEAAFRRREWQRAIEADALAAQARPANGWVRWPRLGRLTLANLRRLAVPRPSFTAGLEPDCRTVVC*
Ga0126308_1038476023300010040Serpentine SoilMSNWYTIETEAEFRRREWQRAVEADARASLARPATRQLRWPRIGRLTVANLRSLAVPRPSFTPHLEPDCRTVAC*
Ga0126308_1070060513300010040Serpentine SoilPTTHDLTNLTLPRSIDVAGVGTRLASSATDAEENEESIMHNWYAIETEAEFRRREWERAIEADALAAQARPANRQPRWPRLGRLTLANLRSLVVPRPSFTSRLQPDCQTVAC*
Ga0126308_1075833823300010040Serpentine SoilMSNWYTVEIEAEFRRREWQRAVEADARATQARPVNGRMRWPRIANATLATLRSLAMARPSFNSHLEPDCHTAVC*
Ga0126308_1077270323300010040Serpentine SoilMSNWYAVETEAEFRRREWQRVVEADARSAQALPANGRMRWPRIPHLTLANLRSLGLPRLSFASRLEPDCRTVVC*
Ga0126312_1023996423300010041Serpentine SoilMNNWYAIETEAEFRRREWQRAVEADARAAQARAATGRMRWPRVPHLTLANLRSLVLPRPSLISHLQPDCRTVVC*
Ga0126312_1107558613300010041Serpentine SoilLTWQERRTQPAKNATDAEENEESVMSNWYAAEVEAEFRRREWQRAVEADARAAQARPADRRMRWPQISHLTLANLRSLALPRVSFISRLEPDCRTAVC*
Ga0126314_1007563623300010042Serpentine SoilVAGVGTRLTRSATDAKEIEESIMNNWYAIETEAAFRRREWQRAVEADALAAQARPANGRPRWPRLGRLTLANLRRLAVPRPSFTAGLEPDCRTVVC*
Ga0126314_1011353623300010042Serpentine SoilMSNWYTVEIEAEFRRREWQRAVEADARAAQACPAHGRMRWPRIPHLTLANLRSLGLPRLSFASRLEPDCRTVVC*
Ga0126314_1136536213300010042Serpentine SoilREWQRAVEIDARAAQARPANGRLRWPRIPHLTLANLRSLAVPRPSFTSRLEPDCRTVVC*
Ga0126314_1138033113300010042Serpentine SoilLTWQERRTRPAQSATGAEENEESVMNNWYAAEVEAEFRRREWQRAVEAEARAIQARPANGRMRWPRIPYPTLASLKALAVPRPSFTSRLEPDCRTVVC*
Ga0126310_1009568523300010044Serpentine SoilMHNWYAIETETEFRRREWQRAIEADARAAQARPANRRPRWPRLGRLTLANLRSLAVPRPSFTSRLEPDCQTVAC*
Ga0126310_1013364423300010044Serpentine SoilVAGVGTRLTRSATDAKEIEESIMNNWYAIETEAAFRRREWQRAIEADALAAQARPANGRPRWPRLGRLTLATLRRLAVPRPSFTAGLEPDCRTVVC*
Ga0126310_1015467523300010044Serpentine SoilMSNWYTVEIEAEFRRREWQRAVEADARAAQARPAHGRMRWPRIPRLTLANLRSLTMPRPSFTSRLEPDCRTVVC*
Ga0126310_1045978933300010044Serpentine SoilAGVGTRLARSATDAQENEESIMNNWYTIEMEAEFRRREWQRAVEADARASLARPATRQLRWPRIGRLTVANLRSLAMPRPSFTPHLEPDCRTVAC*
Ga0126310_1060266013300010044Serpentine SoilMSNWYAVEVEADFRRREWQRAVEADARVAQACPANGRMRWPRIPHLTLANLRSLTLPRPSFTSRLEPDCRTVVC*
Ga0126310_1081401413300010044Serpentine SoilEESIMNNWYAIETEAAFRRREWQRAIEADALAAQASPANGRVRWPRLGRLTLANLRRLAVPRPSFTAGLEPDCRTVVC*
Ga0126311_1005901333300010045Serpentine SoilMSNWYTVEIEAEFRRREWQRAVEADARAAQARPAHGRMRWPRIPHLTLANLRSLTVPRPSFTSRLEPDGRTVVCSLM*
Ga0126311_1041686413300010045Serpentine SoilMNNWYAIETEAEFRRREWQRVVEADARSAQARPANGRMRWPRIPHLSLANLRSLAVPGPSFTSRLEPDCRTVAC*
Ga0126311_1045522723300010045Serpentine SoilMSNWYTIETEAEFRRREWQRAVEADARASLARPATRQLRWPRIGRLTVANLRSLAVSRPSFTPRLEPDCRTVAC*
Ga0126311_1045985413300010045Serpentine SoilMSNWYAVEVEADFRRREWQRAVEADARVAQACPANGRMRWPRIPHLTLASLKSLAVPRPSFTSRLEPD
Ga0126311_1076968413300010045Serpentine SoilPRPLQSATDAEGHGESGMNSWYAAEVEGEFRRREWQRAVEAEARAIQARPANGRMRWPRIPYPTLASLKALAVPRPSFTSRLEPDCRTVVC*
Ga0126311_1101418123300010045Serpentine SoilMHNWYAIETETEFRRREWQRAIEADARAAQARPANRRPRWPRLGRVTLANLRSLAVPRPSFTSRLEPDCQTVAC*
Ga0126306_1027776533300010166Serpentine SoilMNNWYAVETEAEFRRREWQRAVEADALAAQARPAHGRTRWPRLERLTFANLRALALPRPNFTARLEPDCRTVVC*
Ga0126306_1040246923300010166Serpentine SoilVAGVGTRLTRSATDAKEIEESIMNNWYAIETEAAFRRREWQRAIEADALAAQARPANGRPRWPRLGRLTLANLRRLAVPRPSFTAGLEPDCRTVVC*
Ga0126306_1067862613300010166Serpentine SoilVAGVGTRLARSATDAQENEESIMSNWYTIETEAEFRRREWQRAVEADARASLARPATRQLRWPRIGRLTLANLRALAVRQPSFTPHLEPDCRTVAC*
Ga0126306_1123172923300010166Serpentine SoilVAGVGTRLARSATDAEDNEESIMNNWYAIETEAQFRRREWERAVEADARAAQARPATRELRWPRIAQLALANLRSLEVPRPGFTSRLEPDCRTVAC*
Ga0126306_1139885323300010166Serpentine SoilMNNWYAIETEAEFRRREWQRAIEAEALAAQARPVNGRLRWPRFGRLTLANLRLMAVPRPSFTSRLEPDCRTVAC*
Ga0126317_1047442913300011332SoilTRPAQSATDAEENEESTMNNWYAIETEAEFRRREWQRVVEADARAAQARAATGRMRWPRVPHLTLANLRSLVLPRPSLISHLQPDCRTVVC*
Ga0150985_10502566813300012212Avena Fatua RhizosphereDAEENEESIMSNWYAVEVEADFRRREWQRAVEADARVAQACPANGRMRWPRIPHLTLANLRSLTLPRPSFTSRLEPDCRTVVC*
Ga0150985_10821068733300012212Avena Fatua RhizosphereERAMRPAQSATDAEENEESVMSNWYTVEVEAEFRRREWQRTVEADARAAQARPAKGRMRWPRIPRLTLANLRSLTVPRPSFTSRLEPDCRTVVC*
Ga0150985_11769020913300012212Avena Fatua RhizosphereTASHDLTNLPLPRSIHVAGVGTRLARSATDAKENEESIMNNWYAIETETAFRRREWQRAVEADARAVQARPANGRTRWPWIAQLKLANLKSLAVPRPSFTSRLEPDCRTVAC*
Ga0150985_12217401023300012212Avena Fatua RhizosphereMSNWYTVEVEAEYRRREWQREVDADAQAAQASPANGRMRWPRIPRLTLANLRSLTVPRPSFTSRLEPDCRTVVC*
Ga0150984_10128181333300012469Avena Fatua RhizosphereGVGTRLARSATDAKESEEPVMNNWYAVETEAAFRRREWQRAVEADARAAQARPASGRTWWPRLGRLTLENLRSLAMPRPSFSSRLEPDCRTVAC*
Ga0150984_11254976623300012469Avena Fatua RhizosphereMRPAQSATDAEENEESVMSNWYTVEVEAEFRRREWQRAVEADARAAQARSANGRMQWPRIPRLTLANLRSLTVPPPSFTSRLEPDCRTVVC*
Ga0150984_11275668013300012469Avena Fatua RhizosphereRLAQSATDAEENEESIMSNWYAVEVEADFRRREWQRAVEADARVAQACPANGRMRWPRIPHLTLANLRSLTLPRPSFTSRLEPDCRTVVC*
Ga0150984_12025557413300012469Avena Fatua RhizosphereGVGTRLARSATDAKENEESIMNNWYAIETETAFRRREWQRAVEADARAVQARPANGRTRWPWIAQLKLANLKSLAVPRPSFTSRLEPDCRTVAC*
Ga0132258_1354193723300015371Arabidopsis RhizosphereMWQERGIRPAQSATDAEENEESVMSNWYTVEVEAEYRRREWQREVDADAQAAQASPANGRMRWPQIPRLTLANLRSLTVPRPSFTSRLEPDCRTVVC*
Ga0132256_10378491323300015372Arabidopsis RhizosphereDAEENEESVMSNWYTVEVEAEYRRREWQREVDADAQAAQASPANGRMRWPRIPRLTLANLRSLTVPRPSFTSRLEPDCRTVVC*
Ga0132257_10346518513300015373Arabidopsis RhizosphereHPQLVTSQTSPCHVLQMWQERGIRPAQSATDAEENEESVMSNWYTVEVEAEYRRREWQREVDADAQAAQASPANGRMRWPQIPRLTLANLRSLTVPRPSFTSRLEPDCRTVVC*
Ga0190265_1177153713300018422SoilTLLPPTRDLTNLPLPRSIDVAGVGTRLARSATDARENEESIMNNWYAIETEAEFRRREWQRAVEAEALAAQARPANGRPRWPRFGHLTLANLRLLAVPRPSFTSRLEPDCRTVAC
Ga0190269_1122297713300018465SoilMNNWYAIETEAAFRRREWQRAVEADALAAQARPANGRARWPRLGRLTLANLRSLAVPRPSFTAGLEPDCRSVVC
Ga0190268_1107765213300018466SoilLAPSATDAKENEESIMNNWYAVETEAEFRRREWQRAVEADARAAQARPANGQPRWPRIAHPWLVNLRSLAVPRPSFASRLEPDCGTVAC
Ga0190268_1219280513300018466SoilMNNWYAIETEAEFRRREWQREVEADSRATQARPVNGRMRWPRISDLTLSSLRSLALPRPRFISQLEPDCRT
Ga0190273_1167925213300018920SoilMSNWYTAEVEAEFRRREWQRAVEADARAAQARPANGRMRWPRIPHLTLANLRSLTMPRPSFTSRLEPDCRTVVC
Ga0184641_127210313300019254Groundwater SedimentNNWYAVETEAAFRRREWHRAVEADALAAQARPANGRTWWPRLGRLILANLRSLAVPRPSFSSRLEPDCRTVAC
Ga0184644_148064413300019269Groundwater SedimentMNNWYAVETEAAFRRREWHRAVEADALAAQARPANGRTWWPRLGRLTLANLRSLAVPRPSFSSRLEPDCRTVAC
Ga0173481_1037678913300019356SoilMNNWYAIQTEAEFRRREWQRTIEADALAAQARPANRQPRWPRLGRLTLANLRSLAVLRPSFNSRLEPDCQTVAC
Ga0209485_121376913300027691Agricultural SoilMNNWYAIETEAQFRRREWERAVEADARAAQARPANRELRWPRIAQLALANLRSLAMPRPSFTSRLEPDCRTVAC
Ga0268240_1011941213300030496SoilMNNWYAVETEAAFRRREWHRAVEADARAAQARPANGRTWWPRLGRLTLANLRSLVVPRPSFSSRLEPDCRTVAC
Ga0308203_105335313300030829SoilMRPAQSATDAEENEESVMSNWYTIEVEAEFRRREWQRAVEADARAAQARPANGRMRWPRIPRLTLPNLRSLTVPRPSFTSRLEPDCRTVVC
Ga0308202_108185413300030902SoilREMRPAQSATDAEENEESVMSNWYTVEVEAEFRRREWQRAVEADARAAQARPANGRMRWPRIPRLTLPNLRSLTVPRPSFTSRLEPDCRTVVC
Ga0308178_110392613300030990SoilPAQSATDAEENEESVMSNWYTVEVEAEFRRREWQRAVEVDARAAQARPANGRMRWPRIPRLTLPNLRSLTVPRPSFTSRLEPDCRTVVC
Ga0308189_1031627213300031058SoilMRPAQSATDAEENEESVMSNWYTVEVEAEFRRREWQRAVEADARAAQASPANGRMRWPRIPRLTLANLKSLTVPRPSFTSRLEPDCRTVVC
Ga0308201_1021556913300031091SoilRGMRPAQSATDAEENEESVMSNWYTVEVEAEFRRREWQRAVEADARAAQAGPANGRMRWPRIPRLTLPNLRSLTVPRPSFTSRLEPDCRTVVC
Ga0308204_1020833613300031092SoilPAQSATDAEENEESVMSNWYTVEVEAEFRRREWQRAVEADARAAQARPANGRMRWPRIPRLTLPNLRSLTVPRPSFTSRLEPDCRTVVC
Ga0308204_1020898023300031092SoilQRATDAEENEESVMHNWYAVETEAEFRRREWQRAVEADARAAQVRPVNGRMQWLRIANVTLANLRSLATARPSFISHLEPDCRTVVC
Ga0308204_1022232013300031092SoilGVGTRLASSATDAEENEEALMNNWYAIQTEAEFRRREWQRTIEADALAAQARPANRQPRWPRLGRLTLANLRSLALPRPSFSSHLEPDCQTIAC
Ga0308204_1024483613300031092SoilNEESIMHNWYAIETEAEFRRREWERAIEADARAAQARPANGRVRWPRLGRLTLANLRSLAVPRPSFTSRLEPDCQTVAC
Ga0308204_1025686613300031092SoilRTQPAKNATDAEENEESVMSNWYAVEVEAEFRRREWQRAVEADARAAQARPVDGRMRWPQISRLTLANLRSLAVPRPSFISRLEPDCRTAVC
Ga0308181_111406423300031099SoilEMRPAQSATDAEENEESVMSNWYTVEVEAEFRRREWQRAVEADARAAQARPANGRMRWPRIPRLTLANLRSLTVPRPSFASRLEPDCRTVVC
Ga0307408_10010141533300031548RhizosphereMNNWYAVETEAAFRRREWQRMVEADALAAQARPANGRTRWPRLGRLTLANLRSLAGSRPSFTARLEPDCRTVAC
Ga0307405_1098381623300031731RhizosphereMNNWYAVETEAAFRRREWQQAVEADALAAQARPANGRTWWPRLGRLALTNLRALAMPRPGFSSRLEPDCRTVAC
Ga0307413_1123401223300031824RhizosphereMNNWYAVETEAAFRRREWQRAVEADALAAQARPANGRTWWPRLGRLALTNLRALAMPRPGFSSRLEPDCRTVAC
Ga0308175_10029412113300031938SoilMNNWYAVETEVAFRRREWQRAVDADALAAQARPTNGRTWWPRLGRLTLENLRSLAMPRPSFSSRLEPDCRTVAC
Ga0307409_10192330323300031995RhizosphereMNNWYTIETEVEFRRREWQRAVEAEARAAQARPANGHSRWPRIAQLTLANLRSLAVPRPSFTTRLEPDCRTVAC
Ga0307416_10309567713300032002RhizosphereRLPRSIDVAGVGTRLARSATDAKENEESVMNNWYAVETEAAFRRREWQRAVEADALAAQARPANGRTWWPRLGRLALTNLRALAMPRPGFSSRLEPDCRTVAC
Ga0307414_1056270723300032004RhizosphereMSNWYTIETEAEFRRREWQRAVEADARAAQARPAYGRMRWPRIPHLTLANLRSLTMPRPSFTSRLEPDCRTVVC
Ga0307411_1178427713300032005RhizosphereMSNWYTIETEAEFRRREWQRAVEADARASLARPATRQLRWPRIGRLTVANLRSLAMPRLSFTPHLEP
Ga0370548_083010_2_2773300034644SoilMRPAQSATDAEENEESVMSNWYTVEVEAEFRRREWQRAVEADARAAQARPANGRIGWPRIPRLILPNLRSLTVPRPSFTSRLEPDCRTVVC

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.