NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F082331

Metagenome / Metatranscriptome Family F082331

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F082331
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 70 residues
Representative Sequence EWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG
Number of Associated Samples 98
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.89 %
% of genes near scaffold ends (potentially truncated) 98.23 %
% of genes from short scaffolds (< 2000 bps) 92.92 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.115 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(23.894 % of family members)
Environment Ontology (ENVO) Unclassified
(41.593 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(51.327 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 66.67%    β-sheet: 0.00%    Coil/Unstructured: 33.33%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00528BPD_transp_1 30.97
PF05977MFS_3 0.88
PF05685Uma2 0.88
PF03372Exo_endo_phos 0.88
PF13458Peripla_BP_6 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.88
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.88

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.12 %
UnclassifiedrootN/A0.88 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004114|Ga0062593_101285935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017774Open in IMG/M
3300005174|Ga0066680_10406416All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017864Open in IMG/M
3300005332|Ga0066388_106788510All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017576Open in IMG/M
3300005434|Ga0070709_10678993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017800Open in IMG/M
3300005445|Ga0070708_101081012All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017751Open in IMG/M
3300005447|Ga0066689_10015738All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00173584Open in IMG/M
3300005447|Ga0066689_10893101All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017549Open in IMG/M
3300005451|Ga0066681_10725798All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017603Open in IMG/M
3300005459|Ga0068867_101366955All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017656Open in IMG/M
3300005536|Ga0070697_101534147All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017595Open in IMG/M
3300005536|Ga0070697_101929830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017528Open in IMG/M
3300005544|Ga0070686_100175496All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00171519Open in IMG/M
3300005544|Ga0070686_101461367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017575Open in IMG/M
3300005546|Ga0070696_100453333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00171012Open in IMG/M
3300005549|Ga0070704_100521229All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00171034Open in IMG/M
3300005549|Ga0070704_101038494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017743Open in IMG/M
3300005615|Ga0070702_101517919All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017552Open in IMG/M
3300005616|Ga0068852_101353753All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017734Open in IMG/M
3300005713|Ga0066905_101128794All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017697Open in IMG/M
3300005841|Ga0068863_102268764All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017553Open in IMG/M
3300006806|Ga0079220_11136783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017637Open in IMG/M
3300006854|Ga0075425_100854409All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00171041Open in IMG/M
3300006871|Ga0075434_102510342All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017516Open in IMG/M
3300006881|Ga0068865_101544218All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017596Open in IMG/M
3300007265|Ga0099794_10210765All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300009012|Ga0066710_100169780All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3065Open in IMG/M
3300009012|Ga0066710_102681397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium712Open in IMG/M
3300009088|Ga0099830_10401661All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300009088|Ga0099830_10674297All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria850Open in IMG/M
3300009090|Ga0099827_10882806All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300009174|Ga0105241_11122288All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017741Open in IMG/M
3300009553|Ga0105249_10742770All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300009553|Ga0105249_11372802All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300010046|Ga0126384_11813853All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300010321|Ga0134067_10430831All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300010325|Ga0134064_10452162All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria524Open in IMG/M
3300010399|Ga0134127_12355452All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300011269|Ga0137392_10741765All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria812Open in IMG/M
3300012201|Ga0137365_10445006All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium954Open in IMG/M
3300012201|Ga0137365_11284813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria520Open in IMG/M
3300012202|Ga0137363_11121387All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria669Open in IMG/M
3300012202|Ga0137363_11628220All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria538Open in IMG/M
3300012205|Ga0137362_10168483All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi1879Open in IMG/M
3300012206|Ga0137380_11450599All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300012349|Ga0137387_10565899All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium824Open in IMG/M
3300012355|Ga0137369_10386318All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1013Open in IMG/M
3300012360|Ga0137375_10966922All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium672Open in IMG/M
3300012361|Ga0137360_10906912All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi760Open in IMG/M
3300012582|Ga0137358_10305200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1081Open in IMG/M
3300012685|Ga0137397_10807086All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria696Open in IMG/M
3300012917|Ga0137395_10063651All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2361Open in IMG/M
3300012917|Ga0137395_10660226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium756Open in IMG/M
3300012918|Ga0137396_10549616All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium855Open in IMG/M
3300012923|Ga0137359_10292589All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1451Open in IMG/M
3300012925|Ga0137419_11414090All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria587Open in IMG/M
3300012929|Ga0137404_10907035All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium804Open in IMG/M
3300012929|Ga0137404_11216308All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria693Open in IMG/M
3300012930|Ga0137407_10739146All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium928Open in IMG/M
3300012957|Ga0164303_10169513All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1177Open in IMG/M
3300012972|Ga0134077_10472160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria552Open in IMG/M
3300012972|Ga0134077_10590050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria502Open in IMG/M
3300014154|Ga0134075_10303660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium695Open in IMG/M
3300014881|Ga0180094_1022900All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1229Open in IMG/M
3300014885|Ga0180063_1023411All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi1696Open in IMG/M
3300015252|Ga0180075_1033686All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium794Open in IMG/M
3300017997|Ga0184610_1267046All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria567Open in IMG/M
3300018061|Ga0184619_10164780All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1014Open in IMG/M
3300018422|Ga0190265_10718253All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1121Open in IMG/M
3300018429|Ga0190272_13187464All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales510Open in IMG/M
3300019789|Ga0137408_1212155All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1178Open in IMG/M
3300019890|Ga0193728_1300695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria609Open in IMG/M
3300020170|Ga0179594_10234488All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium691Open in IMG/M
3300021344|Ga0193719_10249071All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium751Open in IMG/M
3300021445|Ga0182009_10660942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria563Open in IMG/M
3300021560|Ga0126371_13431736All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales535Open in IMG/M
3300021972|Ga0193737_1019513All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium949Open in IMG/M
3300024310|Ga0247681_1052321All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria628Open in IMG/M
3300025560|Ga0210108_1133297All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria503Open in IMG/M
3300025910|Ga0207684_10045787All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi3710Open in IMG/M
3300025910|Ga0207684_10386659All Organisms → cellular organisms → Bacteria1203Open in IMG/M
3300025922|Ga0207646_10451226All Organisms → cellular organisms → Bacteria1160Open in IMG/M
3300025931|Ga0207644_11500651All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria566Open in IMG/M
3300025934|Ga0207686_11530950All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria550Open in IMG/M
3300025939|Ga0207665_10003072All Organisms → cellular organisms → Bacteria11204Open in IMG/M
3300026088|Ga0207641_12225709All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017548Open in IMG/M
3300026089|Ga0207648_11118654All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria739Open in IMG/M
3300026296|Ga0209235_1245095All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300026320|Ga0209131_1004862All Organisms → cellular organisms → Bacteria8791Open in IMG/M
3300026323|Ga0209472_1069308All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi1459Open in IMG/M
3300026331|Ga0209267_1229176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria679Open in IMG/M
3300026351|Ga0257170_1002131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2064Open in IMG/M
3300026358|Ga0257166_1040880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria649Open in IMG/M
3300026358|Ga0257166_1056694All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300026374|Ga0257146_1019548All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1104Open in IMG/M
3300026446|Ga0257178_1028233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria691Open in IMG/M
3300026536|Ga0209058_1078280All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi1745Open in IMG/M
3300026547|Ga0209156_10099571All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi1448Open in IMG/M
3300026548|Ga0209161_10443740All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria570Open in IMG/M
3300027122|Ga0207538_1010469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria531Open in IMG/M
3300027765|Ga0209073_10344155All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria600Open in IMG/M
3300027787|Ga0209074_10209651All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium736Open in IMG/M
3300029636|Ga0222749_10172943All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1065Open in IMG/M
3300031114|Ga0308187_10375155All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria555Open in IMG/M
(restricted) 3300031197|Ga0255310_10073505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium904Open in IMG/M
3300031720|Ga0307469_10203307All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi1549Open in IMG/M
3300031740|Ga0307468_101343025All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300031740|Ga0307468_101864318All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria571Open in IMG/M
3300032163|Ga0315281_12220088All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017519Open in IMG/M
3300032174|Ga0307470_10431242All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium942Open in IMG/M
3300032782|Ga0335082_11413980All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium566Open in IMG/M
3300032893|Ga0335069_11947120All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria621Open in IMG/M
3300034817|Ga0373948_0118121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria639Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil23.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere11.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.19%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.42%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.54%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.54%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.65%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.65%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.77%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.77%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.89%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.89%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.89%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.89%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014881Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1DaEnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015252Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10DEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300021972Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2EnvironmentalOpen in IMG/M
3300024310Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22EnvironmentalOpen in IMG/M
3300025560Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026351Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-BEnvironmentalOpen in IMG/M
3300026358Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-BEnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026446Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-BEnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027122Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0062593_10128593523300004114SoilVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKAIYG*
Ga0066680_1040641613300005174SoilIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKACTGTPTKAAIAEAVSQLKTIYG*
Ga0066388_10678851013300005332Tropical Forest SoilPKQYRPWIASGDMYFAPYLHAFDKAPEWDIEPRVKPFQKVLETGKLNSWPAPANRQHGEVINRWIVIDMFTKAITGVPTKTAIAEAVAQIKTIYG*
Ga0070709_1067899323300005434Corn, Switchgrass And Miscanthus RhizosphereEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0070708_10108101213300005445Corn, Switchgrass And Miscanthus RhizosphereAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG*
Ga0066689_1001573813300005447SoilEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKAAIAEAVSQIKTIYG*
Ga0066689_1089310113300005447SoilEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG*
Ga0066681_1072579813300005451SoilLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG*
Ga0068867_10136695523300005459Miscanthus RhizosphereLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKACTGTPVKAAISEAVSQLKRIYG*
Ga0070707_10226600413300005468Corn, Switchgrass And Miscanthus RhizosphereTGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGAPTKAAIAEAVSQIKSIYG*
Ga0070697_10153414723300005536Corn, Switchgrass And Miscanthus RhizosphereKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKRIYG*
Ga0070697_10192983023300005536Corn, Switchgrass And Miscanthus RhizosphereDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0070686_10017549613300005544Switchgrass RhizosphereWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKACTGTPVKAAISEAVSQLKRIYG*
Ga0070686_10146136713300005544Switchgrass RhizospherePRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKAIYG*
Ga0070696_10045333323300005546Corn, Switchgrass And Miscanthus RhizosphereFAPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0070704_10052122923300005549Corn, Switchgrass And Miscanthus RhizosphereDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKAIYG*
Ga0070704_10103849413300005549Corn, Switchgrass And Miscanthus RhizosphereDMYFAPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKAIYG*
Ga0070702_10151791913300005615Corn, Switchgrass And Miscanthus RhizosphereKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKACTGTPVKAAISEAVSQLKRIYG*
Ga0068852_10135375313300005616Corn RhizosphereKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKAIYG*
Ga0066905_10112879423300005713Tropical Forest SoilWDIEPRVKPFQKVLETGKLTSWPAAATRQHGEVINRWIVIDMFTKAITGAPTKSVIAEAVAQVKQIYGV*
Ga0068863_10226876423300005841Switchgrass RhizospherePYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0079220_1113678313300006806Agricultural SoilEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKTIYG*
Ga0075425_10085440923300006854Populus RhizosphereDMYFAPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0075434_10251034223300006871Populus RhizosphereLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0068865_10154421813300006881Miscanthus RhizospherePEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIHG*
Ga0099794_1021076513300007265Vadose Zone SoilDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0066710_10016978043300009012Grasslands SoilHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKAAIAEAVSQLKTIYG
Ga0066710_10268139723300009012Grasslands SoilHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKAAIAEAVSQIKTIYG
Ga0099830_1040166123300009088Vadose Zone SoilLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0099830_1067429713300009088Vadose Zone SoilYQKALETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKTVIAEAVSQIKAIYG*
Ga0099827_1088280613300009090Vadose Zone SoilWDIEPRVKPFQKVLETGKLTSWPAPANRPHGEVINRWIVIDMFTKAITGTPTKAAIAEAVSQIKTIYG*
Ga0105241_1112228813300009174Corn RhizosphereVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKACTGTPVKSAIAEAVKQLKTIYG*
Ga0105249_1074277013300009553Switchgrass RhizosphereKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0105249_1137280223300009553Switchgrass RhizospherePFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0126384_1181385313300010046Tropical Forest SoilPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIADAVAQIKSIYG*
Ga0134067_1043083113300010321Grasslands SoilRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG*
Ga0134064_1045216213300010325Grasslands SoilPYLHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKTAIADAVAQIKTIYG*
Ga0134127_1235545213300010399Terrestrial SoilPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKAIYG*
Ga0137392_1074176513300011269Vadose Zone SoilYFAPYLHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKAAIAEAVSQIKTIYG*
Ga0137365_1044500623300012201Vadose Zone SoilFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG*
Ga0137365_1128481313300012201Vadose Zone SoilKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIADAVAQIKTIYG*
Ga0137363_1112138713300012202Vadose Zone SoilAPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0137363_1162822013300012202Vadose Zone SoilAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0137362_1016848313300012205Vadose Zone SoilDMYFAPYLHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG*
Ga0137380_1145059913300012206Vadose Zone SoilIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITIQRLTTSIAEAVSQIKAIYG*
Ga0137387_1056589923300012349Vadose Zone SoilPCFVTGGPYIVPDIHGFDKTLEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG*
Ga0137369_1038631823300012355Vadose Zone SoilETGKLTSWPAPANRQHGEVVNRWIVIDMFTKACTGTPVKAAIAEAVKQLKTIYG*
Ga0137375_1096692213300012360Vadose Zone SoilWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVTRWIVIDMFTKAITGTPTKAAIAEAVAQLKTIYAKG*
Ga0137360_1090691223300012361Vadose Zone SoilAPYLHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKAAIAEAVSQLKTIYG*
Ga0137358_1030520013300012582Vadose Zone SoilLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAIMGTPTKTAIAEAVAQIKTIYG*
Ga0137397_1080708623300012685Vadose Zone SoilGDMYFAPYLHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAISDAVAQIKTIYG*
Ga0137395_1006365113300012917Vadose Zone SoilWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0137395_1066022623300012917Vadose Zone SoilYLHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAISDAVAQIKTIYG*
Ga0137396_1054961623300012918Vadose Zone SoilPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKTIYG
Ga0137359_1029258913300012923Vadose Zone SoilEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0137419_1141409023300012925Vadose Zone SoilDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAISDAVAQIKTIYG*
Ga0137404_1090703523300012929Vadose Zone SoilYFAPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKTIYG*
Ga0137404_1121630813300012929Vadose Zone SoilFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0137407_1073914623300012930Vadose Zone SoilFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKAAIAEAVSQLKTIYG*
Ga0164303_1016951313300012957SoilSGDMYFAPYLHGFDKVPEWDVEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTSTKTTIAEAVSQIKAIYG*
Ga0134077_1047216023300012972Grasslands SoilEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG*
Ga0134077_1059005013300012972Grasslands SoilGFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG*
Ga0134075_1030366013300014154Grasslands SoilIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKAAIAEAVSQIKTIYG*
Ga0180094_102290033300014881SoilVLETGKLTSWPAPANRQHGEVVNRWIVIDMFSKACTGAPTKAVIAEAVAQLKTIYG*
Ga0180063_102341113300014885SoilAPYLHGFDKAPEWDIEPRVKPFQKVLETGKLTTWPAPANRQHGEVVTRWIVIDMFTKAITGTPTKAAIAEAVAQLKTIYG*
Ga0180075_103368623300015252SoilVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKAAIAEAVAQLKTIYG*
Ga0184610_126704613300017997Groundwater SedimentPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKAIYG
Ga0184619_1016478023300018061Groundwater SedimentFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKTIYG
Ga0190265_1071825313300018422SoilDMYFAPYLHAFDKVPEWDIEPRVTQFQKLLETGTLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKAIYG
Ga0190272_1318746423300018429SoilEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKACTGTPVKSAISEAVSQLKTIYG
Ga0137408_121215513300019789Vadose Zone SoilLHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKAAIAEAVSQLKTIYG
Ga0193728_130069513300019890SoilLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0179594_1023448813300020170Vadose Zone SoilPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG
Ga0193719_1024907123300021344SoilFQKVLETGKLTSWPAPANRPHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKTIYG
Ga0182009_1066094223300021445SoilLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKAIYG
Ga0126371_1343173623300021560Tropical Forest SoilVPRVKPFQKVLETGKLRSWPAPANRQHAEVINRWIVIDMFTKACTGQPTKTVIAEAVSQIKQVYGVA
Ga0193737_101951313300021972SoilPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKNAIAEAVSQIKAIYG
Ga0247681_105232113300024310SoilAPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0210108_113329713300025560Natural And Restored WetlandsEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKAAIAEAVSQIKAIYG
Ga0207684_1004578753300025910Corn, Switchgrass And Miscanthus RhizosphereGDMYFAPYLHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIADAVAQIKTIYG
Ga0207684_1038665933300025910Corn, Switchgrass And Miscanthus RhizosphereVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG
Ga0207646_1045122623300025922Corn, Switchgrass And Miscanthus RhizospherePFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKSITGTPTKTAIADAVAQIKTIYG
Ga0207644_1150065113300025931Switchgrass RhizospherePYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0207686_1153095023300025934Miscanthus RhizosphereYFAPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRAHGAVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0207665_1000307213300025939Corn, Switchgrass And Miscanthus RhizospherePFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTSTKNAIAEAVSQIKTIYG
Ga0207641_1222570933300026088Switchgrass RhizosphereFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKACTGTPVKAAISEAVSQLKRIYG
Ga0207648_1111865423300026089Miscanthus RhizosphereKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKACTGTPVKAAISEAVSQLKRIYG
Ga0209235_124509523300026296Grasslands SoilKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG
Ga0209131_100486213300026320Grasslands SoilFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0209472_106930833300026323SoilGDMYFAPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG
Ga0209267_122917613300026331SoilDMYFAPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0257170_100213113300026351SoilVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0257166_104088013300026358SoilPYLHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG
Ga0257166_105669423300026358SoilQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKAAIAEAVSQIKTIYG
Ga0257146_101954813300026374SoilFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0257178_102823323300026446SoilKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0209058_107828033300026536SoilMYFAPYLHAFDKAPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKAAIAEAVSQLKAIYG
Ga0209156_1009957113300026547SoilPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKAAIAEAVSQIKTIYG
Ga0209161_1044374013300026548SoilTEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG
Ga0207538_101046923300027122SoilKVPEWDVEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKAIYG
Ga0209073_1034415513300027765Agricultural SoilVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKTIYG
Ga0209074_1020965123300027787Agricultural SoilKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIY
Ga0222749_1017294323300029636SoilRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0308187_1037515523300031114SoilPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKAAIAEAVSQIKTIYG
(restricted) Ga0255310_1007350513300031197Sandy SoilVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0307469_1020330713300031720Hardwood Forest SoilVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0307468_10134302513300031740Hardwood Forest SoilLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKAITGTPTKTAIAEAVSQIKTIYG
Ga0307468_10186431823300031740Hardwood Forest SoilFAPYLHAFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVAQIKTIYG
Ga0315281_1222008813300032163SedimentDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVVNRWIVIDMFTKACTGTPTKAAIAEAVAQLKTIYG
Ga0307470_1043124223300032174Hardwood Forest SoilFDKVPEWDIEPRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKTIYG
Ga0335082_1141398023300032782SoilRVKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKTAIAEAVSQIKAIYG
Ga0335069_1194712023300032893SoilAPYLHAYDKVPEWDIEPRVKPYHTVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKACTGTPTKAAIAEAVSQLKTIYG
Ga0373948_0118121_453_6383300034817Rhizosphere SoilKPFQKVLETGKLTSWPAPANRQHGEVINRWIVIDMFTKAITGTPTKNAIAEAVSQIKAIY

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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