Metagenome / Metatranscriptome Family F082468

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082468
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	99 residues
Representative Sequence	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRMMEKLNKKYPSTLKALKDKS
Number of Associated Samples	88
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.53 %
% of genes near scaffold ends (potentially truncated)	25.66 %
% of genes from short scaffolds (< 2000 bps)	75.22 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.867 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (28.319 % of family members)
Environment Ontology (ENVO)	Unclassified (61.947 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (88.496 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.65% β-sheet: 6.93% Coil/Unstructured: 58.42%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01503	PRA-PH	41.59
PF07486	Hydrolase_2	13.27
PF08534	Redoxin	13.27
PF02769	AIRS_C	4.42
PF06945	DUF1289	1.77
PF01521	Fe-S_biosyn	0.88
PF01165	Ribosomal_S21	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	13.27
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	1.77
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.88
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.87 %
All Organisms	root	All Organisms	45.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.87 %
Viruses	superkingdom	All Organisms → Viruses	24.78 %
cellular organisms	root	All Organisms → cellular organisms	20.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.31 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.31 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.31 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.31 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.31 %
Crocinitomicaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.31 %
unclassified Crocinitomicaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.31 %
Crocinitomicaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	2.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000930\|BpDRAFT_10004343	Not Available	832	Open in IMG/M
3300002524\|JGI24927J35514_1000345	Not Available	7985	Open in IMG/M
3300002524\|JGI24927J35514_1001630	All Organisms → Viruses → Predicted Viral	2596	Open in IMG/M
3300002754\|JGI24928J39210_1002196	All Organisms → Viruses → Predicted Viral	2183	Open in IMG/M
3300003263\|JGI26117J46588_1005682	Not Available	1172	Open in IMG/M
3300003264\|JGI26119J46589_1001833	All Organisms → Viruses → Predicted Viral	3088	Open in IMG/M
3300003264\|JGI26119J46589_1003101	All Organisms → Viruses → Predicted Viral	2222	Open in IMG/M
3300003478\|JGI26238J51125_1003264	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5262	Open in IMG/M
3300003619\|JGI26380J51729_10005864	Not Available	4618	Open in IMG/M
3300004279\|Ga0066605_10081040	All Organisms → Viruses → Predicted Viral	1385	Open in IMG/M
3300005234\|Ga0066613_1402678	Not Available	649	Open in IMG/M
3300006793\|Ga0098055_1010592	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4153	Open in IMG/M
3300006793\|Ga0098055_1017073	Not Available	3147	Open in IMG/M
3300006925\|Ga0098050_1076820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300007229\|Ga0075468_10125886	Not Available	792	Open in IMG/M
3300007276\|Ga0070747_1045678	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300007276\|Ga0070747_1226386	Not Available	654	Open in IMG/M
3300007276\|Ga0070747_1238342	Not Available	634	Open in IMG/M
3300007549\|Ga0102879_1201384	Not Available	601	Open in IMG/M
3300007557\|Ga0102821_1080967	Not Available	831	Open in IMG/M
3300007620\|Ga0102871_1056121	Not Available	1154	Open in IMG/M
3300007642\|Ga0102876_1099687	Not Available	788	Open in IMG/M
3300007658\|Ga0102898_1095749	Not Available	685	Open in IMG/M
3300007661\|Ga0102866_1145374	Not Available	600	Open in IMG/M
3300007665\|Ga0102908_1010062	All Organisms → Viruses → Predicted Viral	1755	Open in IMG/M
3300007716\|Ga0102867_1045844	All Organisms → Viruses → Predicted Viral	1146	Open in IMG/M
3300007863\|Ga0105744_1072508	Not Available	849	Open in IMG/M
3300007962\|Ga0102907_1008363	All Organisms → Viruses → Predicted Viral	3123	Open in IMG/M
3300007981\|Ga0102904_1061428	Not Available	860	Open in IMG/M
3300008961\|Ga0102887_1041965	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	1534	Open in IMG/M
3300008961\|Ga0102887_1201718	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300008964\|Ga0102889_1029268	All Organisms → Viruses → Predicted Viral	1722	Open in IMG/M
3300008964\|Ga0102889_1040801	All Organisms → Viruses → Predicted Viral	1427	Open in IMG/M
3300008996\|Ga0102831_1047144	All Organisms → Viruses → Predicted Viral	1446	Open in IMG/M
3300009024\|Ga0102811_1271407	Not Available	634	Open in IMG/M
3300009049\|Ga0102911_1035480	All Organisms → Viruses → Predicted Viral	1477	Open in IMG/M
3300009049\|Ga0102911_1113839	Not Available	772	Open in IMG/M
3300009071\|Ga0115566_10285289	Not Available	978	Open in IMG/M
3300009079\|Ga0102814_10166422	All Organisms → Viruses → Predicted Viral	1204	Open in IMG/M
3300009079\|Ga0102814_10474864	Not Available	681	Open in IMG/M
3300009079\|Ga0102814_10562064	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300009086\|Ga0102812_10220901	Not Available	1032	Open in IMG/M
3300009086\|Ga0102812_10747491	Not Available	540	Open in IMG/M
3300009141\|Ga0102884_1015484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1862	Open in IMG/M
3300009141\|Ga0102884_1161854	Not Available	568	Open in IMG/M
3300009142\|Ga0102885_1054281	Not Available	956	Open in IMG/M
3300009432\|Ga0115005_10033236	All Organisms → Viruses → Predicted Viral	3976	Open in IMG/M
3300009505\|Ga0115564_10057094	Not Available	2304	Open in IMG/M
3300009508\|Ga0115567_10944553	Not Available	511	Open in IMG/M
3300009592\|Ga0115101_1144349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	978	Open in IMG/M
3300009599\|Ga0115103_1875825	All Organisms → cellular organisms → Bacteria → Proteobacteria	1285	Open in IMG/M
3300009606\|Ga0115102_10773021	Not Available	1207	Open in IMG/M
3300010150\|Ga0098056_1239287	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300013010\|Ga0129327_10061334	All Organisms → Viruses → Predicted Viral	1864	Open in IMG/M
3300013010\|Ga0129327_10475180	Not Available	674	Open in IMG/M
3300017697\|Ga0180120_10071314	All Organisms → Viruses → Predicted Viral	1540	Open in IMG/M
3300017697\|Ga0180120_10360090	Not Available	575	Open in IMG/M
3300017719\|Ga0181390_1106664	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300017735\|Ga0181431_1003869	Not Available	3892	Open in IMG/M
3300017749\|Ga0181392_1004152	Not Available	5074	Open in IMG/M
3300017751\|Ga0187219_1061956	Not Available	1208	Open in IMG/M
3300017751\|Ga0187219_1133754	Not Available	726	Open in IMG/M
3300017772\|Ga0181430_1227509	Not Available	528	Open in IMG/M
3300017776\|Ga0181394_1210735	Not Available	590	Open in IMG/M
3300017786\|Ga0181424_10029796	All Organisms → cellular organisms → Bacteria → Proteobacteria	2368	Open in IMG/M
3300017786\|Ga0181424_10185472	Not Available	885	Open in IMG/M
3300020165\|Ga0206125_10003566	Not Available	14739	Open in IMG/M
3300020165\|Ga0206125_10055567	All Organisms → Viruses → Predicted Viral	1887	Open in IMG/M
3300020166\|Ga0206128_1137439	Not Available	1002	Open in IMG/M
3300020347\|Ga0211504_1030842	Not Available	1358	Open in IMG/M
3300020347\|Ga0211504_1097590	Not Available	663	Open in IMG/M
3300021085\|Ga0206677_10045820	Not Available	2308	Open in IMG/M
3300021085\|Ga0206677_10061255	All Organisms → Viruses → Predicted Viral	1902	Open in IMG/M
3300021087\|Ga0206683_10047432	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	2445	Open in IMG/M
3300021185\|Ga0206682_10050263	All Organisms → Viruses → Predicted Viral	2282	Open in IMG/M
3300021365\|Ga0206123_10155381	All Organisms → Viruses → Predicted Viral	1045	Open in IMG/M
3300021378\|Ga0213861_10098192	Not Available	1751	Open in IMG/M
3300021389\|Ga0213868_10530235	Not Available	628	Open in IMG/M
3300021957\|Ga0222717_10109985	All Organisms → Viruses → Predicted Viral	1715	Open in IMG/M
3300021959\|Ga0222716_10427091	Not Available	763	Open in IMG/M
3300021960\|Ga0222715_10388593	Not Available	766	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10083909	Not Available	1848	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10338219	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10037702	All Organisms → Viruses → Predicted Viral	2604	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10056322	All Organisms → Viruses → Predicted Viral	1967	Open in IMG/M
(restricted) 3300024261\|Ga0233439_10304257	Not Available	683	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10109694	Not Available	1421	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10320792	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300024343\|Ga0244777_10458741	Not Available	787	Open in IMG/M
3300024343\|Ga0244777_10627008	Not Available	649	Open in IMG/M
3300024346\|Ga0244775_10918588	Not Available	694	Open in IMG/M
3300024346\|Ga0244775_11423946	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300025108\|Ga0208793_1018727	Not Available	2481	Open in IMG/M
3300025108\|Ga0208793_1077451	Not Available	965	Open in IMG/M
3300025570\|Ga0208660_1015650	Not Available	2340	Open in IMG/M
3300025592\|Ga0209658_1014254	All Organisms → Viruses → Predicted Viral	2761	Open in IMG/M
3300025668\|Ga0209251_1135172	Not Available	659	Open in IMG/M
3300025676\|Ga0209657_1049354	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	1512	Open in IMG/M
3300025890\|Ga0209631_10196241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1043	Open in IMG/M
3300027077\|Ga0208941_1004049	All Organisms → Viruses → Predicted Viral	2235	Open in IMG/M
3300027251\|Ga0208809_1003576	All Organisms → cellular organisms → Bacteria → Proteobacteria	3047	Open in IMG/M
3300027278\|Ga0208439_1071059	Not Available	647	Open in IMG/M
3300027308\|Ga0208796_1088302	Not Available	647	Open in IMG/M
3300027753\|Ga0208305_10171201	Not Available	790	Open in IMG/M
3300028008\|Ga0228674_1066103	All Organisms → Viruses → Predicted Viral	1323	Open in IMG/M
3300028287\|Ga0257126_1086828	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300029448\|Ga0183755_1016327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2624	Open in IMG/M
3300031621\|Ga0302114_10126983	Not Available	1144	Open in IMG/M
3300031757\|Ga0315328_10266447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1002	Open in IMG/M
3300031774\|Ga0315331_10043089	Not Available	3348	Open in IMG/M
3300032073\|Ga0315315_10032088	All Organisms → Viruses → Predicted Viral	4882	Open in IMG/M
3300032088\|Ga0315321_10587748	Not Available	661	Open in IMG/M
3300032277\|Ga0316202_10183815	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	46.02%
Coastal	Environmental → Aquatic → Marine → Coastal	12.39%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.62%
Oceanic	Environmental → Aquatic → Marine → Oceanic	7.96%
Strait	Environmental → Aquatic → Marine → Strait	7.96%
Inlet	Environmental → Aquatic → Marine → Inlet	7.08%
Pelagic	Environmental → Aquatic → Marine → Pelagic	6.19%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.77%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	28.32%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	17.70%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	11.50%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.62%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	7.96%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	7.96%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	7.08%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	6.19%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.77%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.89%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	28.32%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	10.62%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	7.96%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	7.96%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	7.08%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	6.19%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.19%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.42%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.54%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	3.54%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.65%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.65%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.65%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.77%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.89%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.89%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.89%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.89%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000930	Marine microbial communities from the coastal margin of the Columbia River, USA - 33 PSU, 16m	Environmental	Open in IMG/M
3300002524	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C49A8_35	Environmental	Open in IMG/M
3300002754	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C43A7_35	Environmental	Open in IMG/M
3300003263	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_48_BLW_10	Environmental	Open in IMG/M
3300003264	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_54_BLW_10	Environmental	Open in IMG/M
3300003478	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA	Environmental	Open in IMG/M
3300003619	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300005234	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI047_100m_RNA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007642	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3	Environmental	Open in IMG/M
3300007658	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3	Environmental	Open in IMG/M
3300007661	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3	Environmental	Open in IMG/M
3300007665	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-3	Environmental	Open in IMG/M
3300007716	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3	Environmental	Open in IMG/M
3300007863	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2um	Environmental	Open in IMG/M
3300007962	Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02	Environmental	Open in IMG/M
3300007981	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3	Environmental	Open in IMG/M
3300008961	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009141	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-3	Environmental	Open in IMG/M
3300009142	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009592	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009599	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009606	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024261 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_100_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025570	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025592	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_150m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025668	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025676	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300027077	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - C0912_C27A4_35 (SPAdes)	Environmental	Open in IMG/M
3300027251	Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02 (SPAdes)	Environmental	Open in IMG/M
3300027278	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (SPAdes)	Environmental	Open in IMG/M
3300027308	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725 (SPAdes)	Environmental	Open in IMG/M
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
BpDRAFT_100043432	3300000930	Freshwater And Marine	MSKGDKDRTTDKKAFDENYERIFGKNQKXXXXXXKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
JGI24927J35514_100034517	3300002524	Marine	MSKGDKDRTTDKKAFDENYERIFGKNQKVTHTELNWDGDLQNLIFAKDQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
JGI24927J35514_10016303	3300002524	Marine	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLEALKDKS*
JGI24928J39210_10021963	3300002754	Marine	MSKGDKDRTTDKKAFDENYERIFGKNQKVTHTELNWXGDLQNLIFAKDQKVKQLQVTDLNWXGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
JGI26117J46588_10056822	3300003263	Marine	MSKGDKDRTTDKKAFDENYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
JGI26119J46589_10018336	3300003264	Marine	MSKGDKDRTTDKKAFDEXYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
JGI26119J46589_10031012	3300003264	Marine	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLKALKDKS*
JGI26238J51125_10032644	3300003478	Marine	MSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
JGI26380J51729_1000586410	3300003619	Marine	MMSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0066605_100810401	3300004279	Marine	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0066613_14026782	3300005234	Marine	MSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLK
Ga0098055_10105924	3300006793	Marine	MSKGDKDRTTDKKAFDENYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPATLKSLKDKS*
Ga0098055_10170738	3300006793	Marine	MSKGDKDRTTNKKAYDENYDRIFRNAKTAQLQVTDLNWDGNVEDEDLGVEGDTRNPEDYYKNIEVVTLPKQHMISRMMEKLNKKYPNTLKALKDKS*
Ga0098050_10768202	3300006925	Marine	MSKGDKDRTTDKKAFDENYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKQHMISRMMEKLNKKYPNTLKALKDKS*
Ga0075468_101258862	3300007229	Aqueous	MSKGDKDRTTNKKAYDENYDRIFLNAKTAQLQVTDLNWDGDLDDEEAEECYHGIQGDTRTPEDYYKNIEVVTIPKQHMISRMMEKLNKKYSGTLKSLKDKS*
Ga0070747_10456783	3300007276	Aqueous	MSKGDKDRTTNKKAYDENYDRIFLNAKTAQLQVTDLNWDGDLDDEEAEECYHGIQGDTRNPEDYYKNIEVVTIPKQHMISRMMEKLNKKYSGTLKSLKDKS*
Ga0070747_12263861	3300007276	Aqueous	RTTDKKAFDENYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRDPADYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0070747_12383421	3300007276	Aqueous	MSKGDKDRTTNKKAFDENYDRIFSNAKTAQLQVTDLNWDGDLEDEEAEECYHGIQGDTRTPEDYYKNIEVVTIPKQHMISRIMEKLNKKYSGTLKSLKDKS*
Ga0102879_12013842	3300007549	Estuarine	MSKGDKDRTTNKKAYDDNYDRIFRNTKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0102821_10809672	3300007557	Estuarine	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0102871_10561212	3300007620	Estuarine	MNKKLRYSGGLMMSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0102876_10996872	3300007642	Estuarine	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTLPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0102898_10957492	3300007658	Estuarine	DDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTLPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0102866_11453741	3300007661	Estuarine	MSKGDKDRTTDKKAFDENYERIFGKNQRVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0102908_10100621	3300007665	Estuarine	MMSKGDKDRTTDKKAFDENYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0102867_10458441	3300007716	Estuarine	KKAYEDNYDRIFRNTKTAQLQVTDLNWDGDLEDEEVEECYHGIQGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0105744_10725082	3300007863	Estuary Water	MMSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0102907_10083636	3300007962	Estuarine	MSDATHGGKGDRDRTTDKKAYEDSYDRIFRNTKTAQLQVTDLNWDGDLEDEEVEECYHGIQGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0102904_10614281	3300007981	Estuarine	KGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0102887_10419655	3300008961	Estuarine	YERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0102887_12017181	3300008961	Estuarine	MSDATHGGKGDRDRTTDKKAYEDNYDRIFRNTKTAQLQVTDLNWDGDLEDEEVEECYHGIQGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0102889_10292682	3300008964	Estuarine	MSKGDKDRTTNKKAYEDNYDRIFRNTKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTLPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0102889_10408014	3300008964	Estuarine	MNKKLRYSGGLMMSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMME
Ga0102831_10471442	3300008996	Estuarine	MSKGDKDRTTNKKAYEDNYDRIFRNTKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0102811_12714071	3300009024	Estuarine	MMSKGDKDRTTDKKAFDENYERIFGKNQKVTHTELNWDGDLHNLIFAKDQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0102911_10354801	3300009049	Estuarine	MNKKLRYSGGLMMSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEK
Ga0102911_11138391	3300009049	Estuarine	MSDATHGGKGDRDRTTDKKAYEDSYDRIFRNTKTAQLQVTDLNWDGDLEDEEVEECYHGIQGDTRNVEDYYKNIEVVTLPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0115566_102852892	3300009071	Pelagic Marine	MSKGDKDRTTNKKAFDENYDRIFLNAKTAQLQVTDLNWDGDLDDEEAEECYHGIQGDTRNPEDYYKNIEVVTIPKQHMIKRLLNRMNKQFPETLKSLKDKS*
Ga0102814_101664221	3300009079	Estuarine	DRTTDKKAFDENYERIFGKNQKVTHTDLNWDGDLQNLIFAKDQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0102814_104748643	3300009079	Estuarine	MNKKLRYSGGLMMSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMM
Ga0102814_105620641	3300009079	Estuarine	MSKGDKDRTTNKKAYEDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0102812_102209013	3300009086	Estuarine	MSKGDKDRTTDKKAFDENYERIFGKNQKVTHTELNWDGDLQNLILAKDQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0102812_107474912	3300009086	Estuarine	MSKGDKDRTTNKKAYEDNYDRIFRNTKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLEALKDKS*
Ga0102884_10154843	3300009141	Estuarine	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0102884_11618542	3300009141	Estuarine	MMSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLKALKDKS*
Ga0102885_10542814	3300009142	Estuarine	MMSKGDKDRTTDKKAFDENYERIFGKNQKVTHTDLNWDGDLQNLIFAKDQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0115005_100332368	3300009432	Marine	MSKGDKDRTTNKKAYDDNYDLIFGKNQKVKQLQVTDLNWDGHLGTEEDTRNPEDYYKNLEVVTLPKKHLIARMMEKLNKKYPATLKSLKDKS*
Ga0115564_100570944	3300009505	Pelagic Marine	MSKGDKDRTTNKKAFDENYDRIFLNAKTAQLQVTDLNWDGDLDDEEAEECYHGIQGDTRNLEDYYKNIEVVTIPKQHMISRMMEKLNKKYPGTLKALKDKS*
Ga0115567_109445531	3300009508	Pelagic Marine	ENYDRIFLNAKTAQLQVTDLNWDGDLEDEEVEECYHGIQGDTRNPEDYYKNIEVVTIPKQHMISRMMEKLNKKYPGTLKSLKDKS*
Ga0115101_11443491	3300009592	Marine	DRDRTTDKKAYEDSYDRIFRNTKTAQLQVTDLNWDGDLEDEEVEECYHGIQGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS*
Ga0115103_18758251	3300009599	Marine	MMSKGDKDRTTDKKAFDENYERIFGKNQKVTHTELNWDGDLQNLIFAKDQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS*
Ga0115102_107730211	3300009606	Marine	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRL
Ga0098056_12392872	3300010150	Marine	MSKGDKDRTTNKKAYDENYDRIFRNAKTAQLQVTDLNWDGNVEDEDLGVEGDTRNPEDYYKNIEVVTLPKQHMISRMLEKLNKKYPSTLKALKDKS*
Ga0129327_100613342	3300013010	Freshwater To Marine Saline Gradient	MSKGDKDRTTNKKAFDENYDRIFSNAKTAQLQVTDLNWDGDLEDEEAEECYHGIQGDTRTPEDYYKNIEVVTIPKQHMISRMMEKLNKKYSGTLKSLKDKS*
Ga0129327_104751801	3300013010	Freshwater To Marine Saline Gradient	MSKGDKDRTTDKKAFDENYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRDPADYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
Ga0180120_100713142	3300017697	Freshwater To Marine Saline Gradient	MSKGDKDRTTNKKAFDENYDRIFSNAKTAQLQVTDLNWDGDLEDEEAEECYHGIQGDTRTPEDYYKNIEVVTIPKQHMISRMMEKLNKKYSGTLKSLKDKS
Ga0180120_103600902	3300017697	Freshwater To Marine Saline Gradient	MSKGDKDRTTDKKAFDEGYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRDPADYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
Ga0181390_11066642	3300017719	Seawater	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIQGDTRNVEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLEALKDKS
Ga0181431_10038693	3300017735	Seawater	MSKGDKDRTMNKKAYDENYDRIFRNAKTAQLQVTDLNWDGDLDDEEAEECYHGLEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLKALKDKS
Ga0181392_100415216	3300017749	Seawater	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTDLNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLEALKDKS
Ga0187219_10619562	3300017751	Seawater	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIQGDTRNPEDYYKNIEKVVLEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLEALKDKS
Ga0187219_11337543	3300017751	Seawater	MSKGDKDRTTDKKAFDENYERIFGKNQKVTHTELNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
Ga0181430_12275092	3300017772	Seawater	MIEWPEIKFPPINLWNAPKQESVMSKGDKDRTMNKKAYDENYDRIFRNAKTAQLQVTDLNWDGDLEDEEAEECYHGLEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLKALKDKS
Ga0181394_12107352	3300017776	Seawater	SKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLEALKDKS
Ga0181424_100297963	3300017786	Seawater	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTDLNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLEALKDKT
Ga0181424_101854722	3300017786	Seawater	MMSKGDKDRTTDKKAFDENYERIFGKNQKVTHTELNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
Ga0206125_1000356617	3300020165	Seawater	MSKGDKDRTTDKKAFDEGYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHMISRMMEKLNKKYPGTLKSLKDKS
Ga0206125_100555673	3300020165	Seawater	MSKGDKDRTTNKKAFDENYDRIFLNAKTAQLQVTDLNWDGDLDDEEAEECYHGIQGDTRNPEDYYKNIEVVTIPKQHMIKRLLNRMNKQFPETLKSLKDKS
Ga0206128_11374392	3300020166	Seawater	MSKGDKDRTTNKKAFDENYDRIFLNAKTAQLQVTDLNWDGDLDDEEAEECYHGIQGDTRNLEDYYKNIEVVTIPKQHMISRMMEKLNKKYPGTLKSLKDKS
Ga0211504_10308422	3300020347	Marine	MSKGDKDRTTDKKAYDENYDRIFRNAKTAQLQVTDLNWDGDLDEDEAEECYHGIQGDTRNPEDYYKNIEVVTLPKQHMISRMMEKLNNKYSGTLKSLKDKS
Ga0211504_10975902	3300020347	Marine	MSKGDKDRTTDKKAFDENYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
Ga0206677_100458207	3300021085	Seawater	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLEALKDKS
Ga0206677_100612553	3300021085	Seawater	MSDATHGGKGDRDRTTDKKAYEDSYDRIFRNTKTAQLQVTDLNWDGDLEDEEVEECYHGIQGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS
Ga0206683_100474323	3300021087	Seawater	MMSKGDKDRTTDKKAFDENYERIFGKNQKVTHTELNWDGDLQNLIFAKDQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
Ga0206682_100502633	3300021185	Seawater	MSDATHGGKGDRDRTTDKKAYEDSYDRIFRNTKTAQLQVTDLNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS
Ga0206123_101553813	3300021365	Seawater	MSKGDKDRTTDKKAFDEGYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHIISRMMEKLNKKYPGTLKSLKDKS
Ga0213861_100981921	3300021378	Seawater	MSKGDKDRTTNKKAYDENYDRIFLNAKTAQLQVTDLNWDGDLDDEEAEECYHGIQGDTRTPEDYYKNIEVVTIPKQHMISRMMEKLNKKYSGTLKSLKDKS
Ga0213868_105302351	3300021389	Seawater	FDENYDRIFSNAKTAQLQVTDLNWDGDLDDEEAEECYHGIQGDTRTPEDYYKNIEVVTIPKQHMISRMMEKLNKKYSGTLKSLKDKS
Ga0222717_101099854	3300021957	Estuarine Water	MSKGDKDRTMNKKAYDENYDRIFRNAKTAQLQVTDLNWDGDLEDEEAEECYHGLEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLKALKDKS
Ga0222716_104270912	3300021959	Estuarine Water	MSKGDKDRTMNKKAYDENYDRIFRNAKTAQLQVTDLNWDGDLDDEEAEECYHGLEGDTRNPEDYYKNIEVVTIPKQHMISRLLKKLNKKYPSTLKALKDKS
Ga0222715_103885931	3300021960	Estuarine Water	DRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLEALKDKS
(restricted) Ga0233432_100839094	3300023109	Seawater	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS
(restricted) Ga0233432_103382191	3300023109	Seawater	MSDATHGGKGDRDRTTDKKAYEDSYDRIFRNTKTAQLQVTDLNWDGDLEDEEVEECYHGIQGDTRNAEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDK
(restricted) Ga0233438_100377024	3300024255	Seawater	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTLPKQHMISRMLEKLNKKYPSTLKALKDKS
(restricted) Ga0233438_100563222	3300024255	Seawater	MSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
(restricted) Ga0233439_103042571	3300024261	Seawater	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTDLNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS
(restricted) Ga0233444_101096943	3300024264	Seawater	MMSKGDKDRTTDKKAFDENYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
(restricted) Ga0233444_103207921	3300024264	Seawater	MSDATHGGKGDRDRTTDKKAYEDSYDRIFRNTKTAQLQVTDLNWDGDLEDEEVEECYHGIQGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKA
Ga0244777_104587411	3300024343	Estuarine	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTLPKQHMISRMMEKLNKKYPSTLKALKDKS
Ga0244777_106270083	3300024343	Estuarine	MSKGDKDRTTDKKAFDENYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPG
Ga0244775_109185881	3300024346	Estuarine	MSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKY
Ga0244775_114239461	3300024346	Estuarine	MSDATHGGKGDRDRTTDKKAYEDSYDRIFRNTKTAQLQVTDLNWDGDLEDEEVEECYHGIQGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKD
Ga0208793_10187273	3300025108	Marine	MSKGDKDRTTNKKAYDENYDRIFRNAKTAQLQVTDLNWDGNVEDEDLGVEGDTRNPEDYYKNIEVVTLPKQHMISRMMEKLNKKYPNTLKALKDKS
Ga0208793_10774511	3300025108	Marine	MSKGDKDRTTDKKAFDENYERIFGKNQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPATLKSLKDKS
Ga0208660_10156504	3300025570	Aqueous	MSKGDKDRTTNKKAYDENYDRIFLNAKTAQLQVTDLNWDGDLDDEEAEECYHGIQGDTRNPEDYYKNIEVVTIPKQHMISRMMEKLNKKYSGTLKSLKDKS
Ga0209658_10142545	3300025592	Marine	MNKKLRYSGGLMMSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
Ga0209251_11351722	3300025668	Marine	DRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTLPKQHMISRMMEKLNKKYPSTLKALKDKS
Ga0209657_10493541	3300025676	Marine	MMSKGDKDRTTDKKAFDENYERIFGKNQKAKQLQVTDLNWDGNLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
Ga0209631_101962413	3300025890	Pelagic Marine	MSKGDKDRTNNKKAYDENYDRIFLNARTAQLQVTDLNWDGDLDDEEAEECYHGIQGDTRNPEDYYKNIEVVTIPKQHMIKRLLNRMNKQFPETLKSLKDKS
Ga0208941_10040494	3300027077	Marine	MSKGDKDRTTDKKAFDENYERIFGKNQKVTHTELNWDGDLQNLIFAKDQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
Ga0208809_10035769	3300027251	Estuarine	MMSKGDKDRTTDKKAFDENYERIFGKNQKVTHTDLNWDGDLQNLIFAKDQKVKQLQVTDLNWDGDLGLEGDTRNPEDYYKNIEVVTLPKKHLISRMMEKLNKKYPGTLKSLKDKS
Ga0208439_10710592	3300027278	Estuarine	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLKALKDKS
Ga0208796_10883022	3300027308	Estuarine	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRMMEKLNKKYPSTLKALKDKS
Ga0208305_101712012	3300027753	Estuarine	MSKGDKDRTTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPS
Ga0228674_10661032	3300028008	Seawater	MSKGDKDRTMNKKAYDENYDRIFRNAKTAQLQVTDLNWDGDLEDEEAEECYHGLEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLEALKDKS
Ga0257126_10868282	3300028287	Marine	MSKGDKDRTTNKKAYEDNYDRIFRNTKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNVEDYYKNIEVVTIPKQHMISRMMEKLNKKYPSTLKALKDKS
Ga0183755_10163275	3300029448	Marine	MSKGDKDRTTNKKAYDENYDRIFRNAKTTQLQLTDLNWDGDLDDEEAEDCYHGIQGDTRNPEDYYKNIEVVTIPKQHMISRLLEKLNKQYSGTLKSLKDKS
Ga0302114_101269832	3300031621	Marine	MSKGDKDRTTNKKAYDDNYDLIFGKNQKVKQLQVTDLNWDGDLGTEEDTRNPEDYYKNLEVVTLPKKHLIARMMEKLNKKYPATLKSLKDKS
Ga0315328_102664471	3300031757	Seawater	MSKGDKDRTTNKKAYNDNYDRIFRNAKTAQLQATDLNWDGDLTEEEVNDCYDSDLGLEGDTRTPEDYYKNIEVVTLPKKHLISRMMEKLDKKYPKTLKSLKDKS
Ga0315331_100430891	3300031774	Seawater	MNKKAYDENYDRIFRNAKTAQLQVTDLNWDGDLEDEEAEECYHGLEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLKALKDKS
Ga0315315_100320884	3300032073	Seawater	MIEWPEIKFPPINLWNAPKQESVMSKGDKDRTMNKKAYDENYDRIFRNAKTAQLQVTDLNWDGDLDDEEAEECYHGLEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLKALKDKS
Ga0315321_105877481	3300032088	Seawater	TTNKKAYDDNYDRIFRNAKTAQLQVTELNWDGDLEDEEVEECYHGIEGDTRNPEDYYKNIEVVTLPKQHMISRLLKKLNKKYPSTLEALKDKS
Ga0316202_101838152	3300032277	Microbial Mat	MSKGDKDRTTNKKAFDENYDRIFSNAKTAQLQVTDLNWDGDLEDEEAEECYHGIQGDTRTPEDYYKNIEVVTIPKQHMISRIMEKLNKKYSGTLKSLKDKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters